AV550144 ( RZ108h06R )

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BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV550144  RZ108h06R
         (475 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q43349-2 Isoform 2 of 29 kDa ribonucleoprotein, chloro...   249   5e-65
UniRef100_Q43349 29 kDa ribonucleoprotein, chloroplastic n=1 Tax...   249   5e-65
UniRef100_Q8L941 Putative RNA-binding protein n=1 Tax=Arabidopsi...   151   3e-35
UniRef100_Q9ZUU4 Ribonucleoprotein At2g37220, chloroplastic n=2 ...   149   7e-35
UniRef100_B9S0K6 Ribonucleoprotein, chloroplast, putative n=1 Ta...   105   1e-21
UniRef100_A7PT43 Chromosome chr8 scaffold_29, whole genome shotg...    97   7e-19
UniRef100_B9IFN7 Predicted protein n=1 Tax=Populus trichocarpa R...    92   2e-17
UniRef100_B9MTC6 Predicted protein n=1 Tax=Populus trichocarpa R...    91   3e-17
UniRef100_Q08935 29 kDa ribonucleoprotein A, chloroplastic n=1 T...    89   2e-16
UniRef100_C6TEA3 Putative uncharacterized protein n=1 Tax=Glycin...    85   2e-15
UniRef100_B7FKG8 Putative uncharacterized protein n=1 Tax=Medica...    84   5e-15
UniRef100_P49313 30 kDa ribonucleoprotein, chloroplastic n=1 Tax...    83   1e-14
UniRef100_Q8W214 Single-stranded DNA binding protein n=1 Tax=Sol...    80   9e-14
UniRef100_Q41367 24 kDa RNA binding protein (Fragment) n=1 Tax=S...    79   1e-13
UniRef100_Q08937 29 kDa ribonucleoprotein B, chloroplastic n=1 T...    68   4e-10
UniRef100_P49314 31 kDa ribonucleoprotein, chloroplastic n=1 Tax...    65   2e-09
UniRef100_Q10KP0 Os03g0376600 protein n=2 Tax=Oryza sativa RepID...    64   4e-09
UniRef100_A2XHA8 Putative uncharacterized protein n=1 Tax=Oryza ...    64   4e-09
UniRef100_C5X377 Putative uncharacterized protein Sb02g040260 n=...    62   2e-08
UniRef100_B6U471 Ribonucleoprotein A n=1 Tax=Zea mays RepID=B6U4...    62   3e-08
UniRef100_B6T531 Ribonucleoprotein A n=1 Tax=Zea mays RepID=B6T5...    61   4e-08
UniRef100_A2YNZ1 Putative uncharacterized protein n=1 Tax=Oryza ...    60   6e-08
UniRef100_Q8LHN4 Os07g0631900 protein n=1 Tax=Oryza sativa Japon...    60   1e-07
UniRef100_C5WYM4 Putative uncharacterized protein Sb01g034120 n=...    60   1e-07
UniRef100_C4J5I7 Putative uncharacterized protein n=1 Tax=Zea ma...    59   2e-07
UniRef100_A6N1F5 Chloroplast 29 kDa ribonucleoprotein (Fragment)...    55   2e-06
graphical overview:
alignment
UniRef100_Q43349-2 UniRef100_Q43349-2 UniRef100_Q43349 UniRef100_Q43349 UniRef100_Q8L941 UniRef100_Q8L941 UniRef100_Q9ZUU4 UniRef100_Q9ZUU4 UniRef100_B9S0K6 UniRef100_B9S0K6 UniRef100_A7PT43 UniRef100_A7PT43 UniRef100_B9IFN7 UniRef100_B9IFN7 UniRef100_B9MTC6 UniRef100_B9MTC6 UniRef100_Q08935 UniRef100_Q08935 UniRef100_C6TEA3 UniRef100_C6TEA3 UniRef100_B7FKG8 UniRef100_B7FKG8 UniRef100_P49313 UniRef100_P49313 UniRef100_Q8W214 UniRef100_Q8W214 UniRef100_Q41367 UniRef100_Q41367 UniRef100_Q08937 UniRef100_Q08937 UniRef100_P49314 UniRef100_P49314 UniRef100_Q10KP0 UniRef100_Q10KP0 UniRef100_A2XHA8 UniRef100_A2XHA8 UniRef100_C5X377 UniRef100_C5X377 UniRef100_B6U471 UniRef100_B6U471 UniRef100_B6T531 UniRef100_B6T531 UniRef100_A2YNZ1 UniRef100_A2YNZ1 UniRef100_Q8LHN4 UniRef100_Q8LHN4 UniRef100_C5WYM4 UniRef100_C5WYM4 UniRef100_C4J5I7 UniRef100_C4J5I7