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[1][TOP]
>UniRef100_Q9ZUI4 T2K10.14 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZUI4_ARATH
Length = 302
Score = 278 bits (712), Expect = 1e-73
Identities = 141/141 (100%), Positives = 141/141 (100%)
Frame = +1
Query: 115 MGIPDAAQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTAD 294
MGIPDAAQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTAD
Sbjct: 1 MGIPDAAQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTAD 60
Query: 295 GSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVIS 474
GSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVIS
Sbjct: 61 GSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVIS 120
Query: 475 KRLSDTILSSGMIDLKELCLV 537
KRLSDTILSSGMIDLKELCLV
Sbjct: 121 KRLSDTILSSGMIDLKELCLV 141
[2][TOP]
>UniRef100_B9T1F1 Exosome complex exonuclease rrp43, putative n=1 Tax=Ricinus
communis RepID=B9T1F1_RICCO
Length = 303
Score = 228 bits (580), Expect = 3e-58
Identities = 110/141 (78%), Positives = 128/141 (90%)
Frame = +1
Query: 115 MGIPDAAQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTAD 294
MG+P+ + DLSTEME DAFRR+FPL F ERHL+ES+RPDGR LG+ARDT + LG V +AD
Sbjct: 1 MGLPNVSGDLSTEMEADAFRRLFPLLFHERHLAESIRPDGRSLGRARDTTLALGAVVSAD 60
Query: 295 GSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVIS 474
GSA+AKIGSTTM+AAI+MEVMTPS++SPDEGCIAI+FHMPPICSP VRPGRPAEAAPV+S
Sbjct: 61 GSAIAKIGSTTMMAAIKMEVMTPSSESPDEGCIAIDFHMPPICSPLVRPGRPAEAAPVVS 120
Query: 475 KRLSDTILSSGMIDLKELCLV 537
K+LSDTI+SS MIDLKEL LV
Sbjct: 121 KQLSDTIMSSAMIDLKELSLV 141
[3][TOP]
>UniRef100_B9H9U8 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H9U8_POPTR
Length = 318
Score = 224 bits (571), Expect = 3e-57
Identities = 113/144 (78%), Positives = 131/144 (90%), Gaps = 3/144 (2%)
Frame = +1
Query: 115 MGIPDAAQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTAD 294
MG+PDA+ DLS+EMEVDAFRR+FPLR+FERHLSES+RPD R LG+ARDT + LG V++A
Sbjct: 1 MGVPDASGDLSSEMEVDAFRRLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAH 60
Query: 295 GSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVIS 474
GSALAKIGSTTMLAAI+MEVMTPST+SP+EG IAI+FHMPPICSP VRPGRPAEAAPVIS
Sbjct: 61 GSALAKIGSTTMLAAIKMEVMTPSTESPEEGSIAIDFHMPPICSPIVRPGRPAEAAPVIS 120
Query: 475 KRLSDTI---LSSGMIDLKELCLV 537
K+LSDTI ++SGMI+LKEL LV
Sbjct: 121 KQLSDTISRQVNSGMINLKELSLV 144
[4][TOP]
>UniRef100_B9II78 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9II78_POPTR
Length = 439
Score = 219 bits (558), Expect = 1e-55
Identities = 114/161 (70%), Positives = 129/161 (80%), Gaps = 20/161 (12%)
Frame = +1
Query: 115 MGIPDAAQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTAD 294
MG+PDA+ DLS+EMEVDAFR +FPLR+FERHLSES+RPD R LG+ARDT + LG V++A
Sbjct: 1 MGVPDASGDLSSEMEVDAFRHLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAH 60
Query: 295 GSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVIS 474
GSALAKIGSTTMLAAI+MEVMTPST+SPDEGCIAI+FHMPPICSP VRPGRPAEAAPVIS
Sbjct: 61 GSALAKIGSTTMLAAIKMEVMTPSTESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVIS 120
Query: 475 KRLSDTILS--------------------SGMIDLKELCLV 537
K+LSDTI SGMI+LKEL LV
Sbjct: 121 KQLSDTISRQVKFSASIDSPQRLILHAEISGMINLKELSLV 161
[5][TOP]
>UniRef100_Q2PYZ2 3'-5'-exoribonuclease/RNA binding protein-like protein n=1
Tax=Solanum tuberosum RepID=Q2PYZ2_SOLTU
Length = 314
Score = 216 bits (551), Expect = 6e-55
Identities = 108/141 (76%), Positives = 123/141 (87%)
Frame = +1
Query: 115 MGIPDAAQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTAD 294
M + + DLS+EMEVDAFRR+FPLR+ E HL +S+RPD R+LG ARDT + LG V++AD
Sbjct: 1 MAAANGSSDLSSEMEVDAFRRLFPLRYHEHHLLKSVRPDARKLGSARDTTLALGAVASAD 60
Query: 295 GSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVIS 474
GSALAKIGSTTMLAAI+MEVMTP+ + PDEG IAIEFHMPPICSP VRPGRPAEAA VIS
Sbjct: 61 GSALAKIGSTTMLAAIKMEVMTPTVECPDEGSIAIEFHMPPICSPLVRPGRPAEAASVIS 120
Query: 475 KRLSDTILSSGMIDLKELCLV 537
K+LSDTILSSGMIDLKELCLV
Sbjct: 121 KQLSDTILSSGMIDLKELCLV 141
[6][TOP]
>UniRef100_Q2PYX7 3'-5'-exoribonuclease/RNA binding-like protein n=1 Tax=Solanum
tuberosum RepID=Q2PYX7_SOLTU
Length = 303
Score = 211 bits (537), Expect = 3e-53
Identities = 104/141 (73%), Positives = 122/141 (86%)
Frame = +1
Query: 115 MGIPDAAQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTAD 294
M + + DL +EMEVDAFRR+FPLR+ E+HL +S+RPD R+LG ARDT + LG V++A+
Sbjct: 1 MAAANGSSDLYSEMEVDAFRRLFPLRYHEQHLLKSVRPDARKLGSARDTTLALGAVASAE 60
Query: 295 GSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVIS 474
GSALAKIGSTTMLAAI+ME+MTP+ + PDEG IAIEFHMPPICSP VRPGRPAE A VIS
Sbjct: 61 GSALAKIGSTTMLAAIKMEIMTPTVECPDEGSIAIEFHMPPICSPLVRPGRPAEVASVIS 120
Query: 475 KRLSDTILSSGMIDLKELCLV 537
K+LSDTILSSGMIDLKELCLV
Sbjct: 121 KQLSDTILSSGMIDLKELCLV 141
[7][TOP]
>UniRef100_UPI0001983E1A PREDICTED: similar to 3-5-exoribonuclease/RNA binding protein-like
protein n=1 Tax=Vitis vinifera RepID=UPI0001983E1A
Length = 303
Score = 204 bits (520), Expect = 2e-51
Identities = 102/133 (76%), Positives = 118/133 (88%)
Frame = +1
Query: 139 DLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIG 318
DLS+EMEVDAFRR+FPLR+ ER L +S+RPD R LG+ARDT + LG V++ADGSALAKIG
Sbjct: 9 DLSSEMEVDAFRRLFPLRYHERFLLDSIRPDARPLGRARDTSLALGAVASADGSALAKIG 68
Query: 319 STTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTIL 498
TTMLAA++MEVMTP +SPDEG IAIEF+MPPICSP VRPGRPAE APV+SK+LSDTIL
Sbjct: 69 CTTMLAAVKMEVMTPPKESPDEGSIAIEFYMPPICSPLVRPGRPAEEAPVVSKQLSDTIL 128
Query: 499 SSGMIDLKELCLV 537
SSGMI+LKEL LV
Sbjct: 129 SSGMINLKELSLV 141
[8][TOP]
>UniRef100_A7PWG2 Chromosome chr8 scaffold_34, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PWG2_VITVI
Length = 134
Score = 186 bits (471), Expect = 1e-45
Identities = 91/120 (75%), Positives = 106/120 (88%)
Frame = +1
Query: 139 DLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIG 318
DLS+EMEVDAFRR+FPLR+ ER L +S+RPD R LG+ARDT + LG V++ADGSALAKIG
Sbjct: 9 DLSSEMEVDAFRRLFPLRYHERFLLDSIRPDARPLGRARDTSLALGAVASADGSALAKIG 68
Query: 319 STTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTIL 498
TTMLAA++MEVMTP +SPDEG IAIEF+MPPICSP VRPGRPAE APV+SK+LSDTIL
Sbjct: 69 CTTMLAAVKMEVMTPPKESPDEGSIAIEFYMPPICSPLVRPGRPAEEAPVVSKQLSDTIL 128
[9][TOP]
>UniRef100_Q53MX4 3' exoribonuclease family, domain 1, putative n=1 Tax=Oryza sativa
Japonica Group RepID=Q53MX4_ORYSJ
Length = 185
Score = 185 bits (469), Expect = 2e-45
Identities = 89/136 (65%), Positives = 111/136 (81%)
Frame = +1
Query: 130 AAQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALA 309
AA L+ EMEV+A+RR+FPL F ERHL ES+RPD R+ +AR T V L VS+A GSAL
Sbjct: 9 AAGGLAGEMEVEAYRRLFPLAFLERHLRESVRPDARRPAEARPTTVALAAVSSAHGSALV 68
Query: 310 KIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSD 489
++G T MLA+I++EVM+PS ++PDEG IA+EFHMPPICSP VRPGRPAE APVISK L D
Sbjct: 69 RLGDTAMLASIKLEVMSPSGEAPDEGSIAVEFHMPPICSPLVRPGRPAEVAPVISKNLED 128
Query: 490 TILSSGMIDLKELCLV 537
++SSGM++LKELCL+
Sbjct: 129 ILMSSGMLNLKELCLI 144
[10][TOP]
>UniRef100_B7ELW5 Putative uncharacterized protein n=2 Tax=Oryza sativa
RepID=B7ELW5_ORYSJ
Length = 306
Score = 185 bits (469), Expect = 2e-45
Identities = 89/136 (65%), Positives = 111/136 (81%)
Frame = +1
Query: 130 AAQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALA 309
AA L+ EMEV+A+RR+FPL F ERHL ES+RPD R+ +AR T V L VS+A GSAL
Sbjct: 9 AAGGLAGEMEVEAYRRLFPLAFLERHLRESVRPDARRPAEARPTTVALAAVSSAHGSALV 68
Query: 310 KIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSD 489
++G T MLA+I++EVM+PS ++PDEG IA+EFHMPPICSP VRPGRPAE APVISK L D
Sbjct: 69 RLGDTAMLASIKLEVMSPSGEAPDEGSIAVEFHMPPICSPLVRPGRPAEVAPVISKNLED 128
Query: 490 TILSSGMIDLKELCLV 537
++SSGM++LKELCL+
Sbjct: 129 ILMSSGMLNLKELCLI 144
[11][TOP]
>UniRef100_B4FDY3 Exosome complex exonuclease RRP43 n=1 Tax=Zea mays
RepID=B4FDY3_MAIZE
Length = 306
Score = 180 bits (456), Expect = 7e-44
Identities = 84/138 (60%), Positives = 110/138 (79%)
Frame = +1
Query: 124 PDAAQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSA 303
P AA ++ EMEV+A+RR+FP+ F ERHL ES+R D R+L +AR T V LG VS+A GSA
Sbjct: 7 PAAASGVAGEMEVEAYRRLFPVAFLERHLGESVRIDARRLREARPTTVALGAVSSAHGSA 66
Query: 304 LAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRL 483
LA++G T MLA++++EVM+P + PDEG +A+EFHMPPICSP VRPGRP + APVISK L
Sbjct: 67 LARLGDTAMLASVKLEVMSPPAEHPDEGSVAVEFHMPPICSPLVRPGRPTDVAPVISKAL 126
Query: 484 SDTILSSGMIDLKELCLV 537
D + SSGM++LK+LCL+
Sbjct: 127 EDVLTSSGMLNLKDLCLI 144
[12][TOP]
>UniRef100_C5YHQ9 Putative uncharacterized protein Sb07g026060 n=1 Tax=Sorghum
bicolor RepID=C5YHQ9_SORBI
Length = 306
Score = 179 bits (453), Expect = 1e-43
Identities = 83/138 (60%), Positives = 110/138 (79%)
Frame = +1
Query: 124 PDAAQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSA 303
P AA ++ EMEV+A+RR+FP+ F ERHL ES+R D R+L +AR T + LG VS+A GSA
Sbjct: 7 PAAASGVAGEMEVEAYRRLFPVAFLERHLGESVRIDARRLREARPTTIALGAVSSAHGSA 66
Query: 304 LAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRL 483
L ++G T MLA++++EVM+P + PDEG +A+EFHMPPICSP VRPGR AE APVISK L
Sbjct: 67 LVRLGDTAMLASVKLEVMSPPAEHPDEGSVAVEFHMPPICSPLVRPGRSAEVAPVISKAL 126
Query: 484 SDTILSSGMIDLKELCLV 537
D ++SSGM++LK+LCL+
Sbjct: 127 EDVLMSSGMLNLKDLCLI 144
[13][TOP]
>UniRef100_C0HIG1 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0HIG1_MAIZE
Length = 306
Score = 176 bits (445), Expect = 1e-42
Identities = 83/138 (60%), Positives = 110/138 (79%)
Frame = +1
Query: 124 PDAAQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSA 303
P AA ++ EMEV+A+RR+FP+ F ERHL ES+R D R+L +AR T V LG VS+A GSA
Sbjct: 7 PAAAIGVAGEMEVEAYRRLFPVAFLERHLGESVRIDARRLREARTTTVALGAVSSAHGSA 66
Query: 304 LAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRL 483
L ++G T MLA++++EVM+PS + PDEG +++EFHMPPICSP VRPGR AE APVISK L
Sbjct: 67 LVRVGDTAMLASVKLEVMSPSAEYPDEGSVSVEFHMPPICSPLVRPGRSAEVAPVISKAL 126
Query: 484 SDTILSSGMIDLKELCLV 537
D ++SS M++LK+LCL+
Sbjct: 127 EDVLMSSRMLNLKDLCLI 144
[14][TOP]
>UniRef100_B6T686 Exosome complex exonuclease RRP43 n=1 Tax=Zea mays
RepID=B6T686_MAIZE
Length = 306
Score = 176 bits (445), Expect = 1e-42
Identities = 83/138 (60%), Positives = 110/138 (79%)
Frame = +1
Query: 124 PDAAQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSA 303
P AA ++ EMEV+A+RR+FP+ F ERHL ES+R D R+L +AR T V LG VS+A GSA
Sbjct: 7 PAAAIGVAGEMEVEAYRRLFPVAFLERHLGESVRIDARRLREARTTTVALGAVSSAHGSA 66
Query: 304 LAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRL 483
L ++G T MLA++++EVM+PS + PDEG +++EFHMPPICSP VRPGR AE APVISK L
Sbjct: 67 LVRVGDTAMLASVKLEVMSPSAEYPDEGSVSVEFHMPPICSPLVRPGRSAEVAPVISKAL 126
Query: 484 SDTILSSGMIDLKELCLV 537
D ++SS M++LK+LCL+
Sbjct: 127 EDVLMSSRMLNLKDLCLI 144
[15][TOP]
>UniRef100_A9RPF4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RPF4_PHYPA
Length = 319
Score = 172 bits (435), Expect = 2e-41
Identities = 79/135 (58%), Positives = 111/135 (82%)
Frame = +1
Query: 133 AQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAK 312
A S MEV+A++R++PL+F+ERHL +RPDGR L +AR T VNLG ++TADGSAL K
Sbjct: 10 ADAASATMEVEAYKRLYPLQFYERHLDSDVRPDGRPLTRARPTSVNLGSIATADGSALVK 69
Query: 313 IGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDT 492
IG+TTMLA +++EV+TPST SP++G +A++F MP ICSP VRPGRPAEAA V+S++LS+
Sbjct: 70 IGNTTMLAGVKLEVITPSTASPNQGQVAVDFQMPSICSPLVRPGRPAEAAWVVSEQLSNA 129
Query: 493 ILSSGMIDLKELCLV 537
++SS ++L++LC+V
Sbjct: 130 LVSSNFVNLQQLCIV 144
[16][TOP]
>UniRef100_Q0IT44 Os11g0311300 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group
RepID=Q0IT44_ORYSJ
Length = 300
Score = 169 bits (428), Expect = 1e-40
Identities = 80/121 (66%), Positives = 99/121 (81%)
Frame = +1
Query: 175 RIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEV 354
R+FPL F ERHL ES+RPD R+ +AR T V L VS+A GSAL ++G T MLA+I++EV
Sbjct: 18 RLFPLAFLERHLRESVRPDARRPAEARPTTVALAAVSSAHGSALVRLGDTAMLASIKLEV 77
Query: 355 MTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
M+PS ++PDEG IA+EFHMPPICSP VRPGRPAE APVISK L D ++SSGM++LKELCL
Sbjct: 78 MSPSGEAPDEGSIAVEFHMPPICSPLVRPGRPAEVAPVISKNLEDILMSSGMLNLKELCL 137
Query: 535 V 537
+
Sbjct: 138 I 138
[17][TOP]
>UniRef100_Q53M91 Expressed protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q53M91_ORYSJ
Length = 165
Score = 163 bits (413), Expect = 6e-39
Identities = 79/123 (64%), Positives = 98/123 (79%)
Frame = +1
Query: 130 AAQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALA 309
AA L+ EMEV+A+RR+FPL F ERHL ES+RPD R+ +AR T V L VS+A GSAL
Sbjct: 9 AAGGLAGEMEVEAYRRLFPLAFLERHLRESVRPDARRPAEARPTTVALAAVSSAHGSALV 68
Query: 310 KIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSD 489
++G T MLA+I++EVM+PS ++PDEG IA+EFHMPPICSP VRPGRPAE APVISK L D
Sbjct: 69 RLGDTAMLASIKLEVMSPSGEAPDEGSIAVEFHMPPICSPLVRPGRPAEVAPVISKNLED 128
Query: 490 TIL 498
++
Sbjct: 129 ILM 131
[18][TOP]
>UniRef100_UPI0001865003 hypothetical protein BRAFLDRAFT_89563 n=1 Tax=Branchiostoma
floridae RepID=UPI0001865003
Length = 275
Score = 122 bits (307), Expect = 1e-26
Identities = 52/123 (42%), Positives = 87/123 (70%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ P+ ++ R L E +RPDGR+LG+ R T +N+G ++TA+GSAL K+G+TT++ I+
Sbjct: 5 FKTAQPVEYYRRFLKEDVRPDGRELGEIRHTTLNIGSITTAEGSALVKLGNTTVICGIKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E+ P+ + P +G + +PP+CSP RPG P+E A V+S+ ++D I +SG++ L++L
Sbjct: 65 ELCNPTAEEPKKGFVVPNVDLPPLCSPRFRPGPPSEQAQVVSQLMADIIENSGVVALEDL 124
Query: 529 CLV 537
C+V
Sbjct: 125 CIV 127
[19][TOP]
>UniRef100_C1N3D3 3' exoribonuclease n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N3D3_9CHLO
Length = 301
Score = 121 bits (304), Expect = 3e-26
Identities = 53/127 (41%), Positives = 85/127 (66%)
Frame = +1
Query: 154 MEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTML 333
ME A++R++P ++ + L+E RPDGR L +ARD V G+V++ADGSAL KIG TT L
Sbjct: 1 MEAAAYKRLYPHEYYRKFLAEETRPDGRPLARARDVSVANGVVTSADGSALVKIGRTTAL 60
Query: 334 AAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMI 513
AA ++E P +PD G + + +PP+C+ + RPGRP E + ++R+ D + + ++
Sbjct: 61 AAAKLEPAPPEPTAPDVGVVEVTVELPPMCAASARPGRPTEESQRCARRIEDVLRDANVV 120
Query: 514 DLKELCL 534
DL++LC+
Sbjct: 121 DLRKLCI 127
[20][TOP]
>UniRef100_Q96B26 Exosome complex exonuclease RRP43 n=1 Tax=Homo sapiens
RepID=EXOS8_HUMAN
Length = 276
Score = 121 bits (303), Expect = 4e-26
Identities = 55/122 (45%), Positives = 83/122 (68%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+LG+ R T VN+G +STADGSAL K+G+TT++ ++
Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E PSTD+PD+G + +PP+CS R G P E A V S+ ++D I +S +I ++L
Sbjct: 65 EFAAPSTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[21][TOP]
>UniRef100_B3RYQ0 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax
adhaerens RepID=B3RYQ0_TRIAD
Length = 266
Score = 120 bits (301), Expect = 6e-26
Identities = 59/123 (47%), Positives = 81/123 (65%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
FR + P F++R ++E++RPD R + R T VN+G ++TA+GSAL KIG+TTML I+
Sbjct: 1 FRTLRPKEFYDRFIAENIRPDRRTFKQFRKTTVNVGSITTANGSALVKIGNTTMLCGIKT 60
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P DSPD G I +PP+CS RPG P E A V S+ L+D I S +I+LK+L
Sbjct: 61 EFAVPKLDSPDHGYIVPNVDLPPLCSYRFRPGPPGEQAQVCSQYLADIIKSCNLINLKDL 120
Query: 529 CLV 537
C+V
Sbjct: 121 CIV 123
[22][TOP]
>UniRef100_UPI000155FC76 PREDICTED: similar to Exosome complex exonuclease RRP43 (Ribosomal
RNA-processing protein 43) (Exosome component 8) (p9)
(Opa-interacting protein 2) n=1 Tax=Equus caballus
RepID=UPI000155FC76
Length = 276
Score = 119 bits (299), Expect = 1e-25
Identities = 55/122 (45%), Positives = 82/122 (67%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+LG+ R T VN+G +STADGSAL K+G+TT++ I+
Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGIKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P TD+PD+G + +PP+CS R G P E A V S+ ++D I +S +I ++L
Sbjct: 65 EFAAPPTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[23][TOP]
>UniRef100_UPI00005A4673 PREDICTED: similar to Exosome complex exonuclease RRP43 (Ribosomal
RNA processing protein 43) (Exosome component 8) (p9)
(Opa-interacting protein 2) isoform 3 n=1 Tax=Canis
lupus familiaris RepID=UPI00005A4673
Length = 210
Score = 119 bits (299), Expect = 1e-25
Identities = 55/122 (45%), Positives = 82/122 (67%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+LG+ R T VN+G +STADGSAL K+G+TT++ I+
Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGIKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P TD+PD+G + +PP+CS R G P E A V S+ ++D I +S +I ++L
Sbjct: 65 EFAAPPTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[24][TOP]
>UniRef100_UPI00005A4672 PREDICTED: similar to Exosome complex exonuclease RRP43 (Ribosomal
RNA processing protein 43) (Exosome component 8) (p9)
(Opa-interacting protein 2) isoform 2 n=1 Tax=Canis
lupus familiaris RepID=UPI00005A4672
Length = 200
Score = 119 bits (299), Expect = 1e-25
Identities = 55/122 (45%), Positives = 82/122 (67%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+LG+ R T VN+G +STADGSAL K+G+TT++ I+
Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGIKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P TD+PD+G + +PP+CS R G P E A V S+ ++D I +S +I ++L
Sbjct: 65 EFAAPPTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[25][TOP]
>UniRef100_UPI00005A4671 PREDICTED: similar to Exosome complex exonuclease RRP43 (Ribosomal
RNA processing protein 43) (Exosome component 8) (p9)
(Opa-interacting protein 2) isoform 1 n=1 Tax=Canis
lupus familiaris RepID=UPI00005A4671
Length = 276
Score = 119 bits (299), Expect = 1e-25
Identities = 55/122 (45%), Positives = 82/122 (67%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+LG+ R T VN+G +STADGSAL K+G+TT++ I+
Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGIKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P TD+PD+G + +PP+CS R G P E A V S+ ++D I +S +I ++L
Sbjct: 65 EFAAPPTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[26][TOP]
>UniRef100_UPI0000E235A0 PREDICTED: exosome component 8 isoform 2 n=1 Tax=Pan troglodytes
RepID=UPI0000E235A0
Length = 210
Score = 119 bits (298), Expect = 1e-25
Identities = 54/122 (44%), Positives = 82/122 (67%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+LG+ R T VN+G +STADGSAL K+G+TT++ ++
Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P TD+PD+G + +PP+CS R G P E A V S+ ++D I +S +I ++L
Sbjct: 65 EFAAPPTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[27][TOP]
>UniRef100_UPI0000E2359F PREDICTED: exosome component 8 isoform 3 n=1 Tax=Pan troglodytes
RepID=UPI0000E2359F
Length = 246
Score = 119 bits (298), Expect = 1e-25
Identities = 54/122 (44%), Positives = 82/122 (67%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+LG+ R T VN+G +STADGSAL K+G+TT++ ++
Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P TD+PD+G + +PP+CS R G P E A V S+ ++D I +S +I ++L
Sbjct: 65 EFAAPPTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[28][TOP]
>UniRef100_UPI0000E2359E PREDICTED: exosome component 8 isoform 4 n=1 Tax=Pan troglodytes
RepID=UPI0000E2359E
Length = 276
Score = 119 bits (298), Expect = 1e-25
Identities = 54/122 (44%), Positives = 82/122 (67%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+LG+ R T VN+G +STADGSAL K+G+TT++ ++
Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P TD+PD+G + +PP+CS R G P E A V S+ ++D I +S +I ++L
Sbjct: 65 EFAAPPTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[29][TOP]
>UniRef100_UPI0000D9E665 PREDICTED: exosome component 8 isoform 2 n=1 Tax=Macaca mulatta
RepID=UPI0000D9E665
Length = 276
Score = 119 bits (298), Expect = 1e-25
Identities = 54/122 (44%), Positives = 82/122 (67%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+LG+ R T VN+G +STADGSAL K+G+TT++ ++
Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P TD+PD+G + +PP+CS R G P E A V S+ ++D I +S +I ++L
Sbjct: 65 EFAAPPTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[30][TOP]
>UniRef100_B0X3N6 Exosome complex exonuclease RRP43 n=1 Tax=Culex quinquefasciatus
RepID=B0X3N6_CULQU
Length = 274
Score = 119 bits (297), Expect = 2e-25
Identities = 50/127 (39%), Positives = 86/127 (67%)
Frame = +1
Query: 154 MEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTML 333
M++ +++I P+++++ HL ++RPDGR++G R +N G +++ADGS++ KIG+TT++
Sbjct: 1 MDLKTYKKIHPVKYYKDHLESNIRPDGREVGDLRPLAINFGSITSADGSSIVKIGNTTVV 60
Query: 334 AAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMI 513
I+ E+ P P+ G + + P+CSP RPG P+E A V S L+D IL+SG +
Sbjct: 61 CGIKAELAPPKPVEPETGFLVPNIEISPLCSPKYRPGPPSEEAQVYSCSLADAILNSGCV 120
Query: 514 DLKELCL 534
+LK+LC+
Sbjct: 121 NLKDLCI 127
[31][TOP]
>UniRef100_B0WFR3 Exosome complex exonuclease RRP43 n=1 Tax=Culex quinquefasciatus
RepID=B0WFR3_CULQU
Length = 274
Score = 119 bits (297), Expect = 2e-25
Identities = 50/127 (39%), Positives = 86/127 (67%)
Frame = +1
Query: 154 MEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTML 333
M++ +++I P+++++ HL ++RPDGR++G R +N G +++ADGS++ KIG+TT++
Sbjct: 1 MDLKTYKKIHPVKYYKDHLESNIRPDGREVGDLRPLAINFGSITSADGSSIVKIGNTTVV 60
Query: 334 AAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMI 513
I+ E+ P P+ G + + P+CSP RPG P+E A V S L+D IL+SG +
Sbjct: 61 CGIKAELTPPKPVEPETGFLVPNIEISPLCSPKYRPGPPSEEAQVYSCSLADAILNSGCV 120
Query: 514 DLKELCL 534
+LK+LC+
Sbjct: 121 NLKDLCI 127
[32][TOP]
>UniRef100_UPI000155C954 PREDICTED: similar to Chain C, Structure Of The Human Rna Exosome
Composed Of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42,
Csl4, Rrp4, And Rrp40 n=1 Tax=Ornithorhynchus anatinus
RepID=UPI000155C954
Length = 276
Score = 117 bits (293), Expect = 5e-25
Identities = 53/122 (43%), Positives = 82/122 (67%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+LG+ R T VN+G +STADGSAL K+G+TT++ ++
Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P D+P++G + +PP+CS RPG P E A V S+ ++D I +S +I ++L
Sbjct: 65 EFTAPPGDAPNKGYVVPNVDLPPLCSSRFRPGPPGEEAQVASQFINDVIENSQLIAKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[33][TOP]
>UniRef100_UPI00001C7C53 UPI00001C7C53 related cluster n=1 Tax=Rattus norvegicus
RepID=UPI00001C7C53
Length = 276
Score = 116 bits (291), Expect = 9e-25
Identities = 53/122 (43%), Positives = 80/122 (65%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+LG+ R T VN+G +STADGSAL K+G+TT++ ++
Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P D+PD G + +PP+CS R G P E A V S+ ++D I +S +I ++L
Sbjct: 65 EFAAPPVDAPDRGYVVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVIENSQIIKKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[34][TOP]
>UniRef100_A7SQ48 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SQ48_NEMVE
Length = 276
Score = 116 bits (291), Expect = 9e-25
Identities = 53/123 (43%), Positives = 86/123 (69%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ P+ ++++ L E++RPDGR L R+TI+N+G +STA+GSAL K+G+TT++ +
Sbjct: 5 FKTAEPVEYYKQFLKENIRPDGRGLFDFRETILNVGSISTANGSALVKLGNTTVVCGVTA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P+ D P++G I +PP+CSP+ RPG P+E A V+S + + I +S +IDL++L
Sbjct: 65 EFAEPAADVPNKGFIVPNVDLPPLCSPSFRPGPPSEHAQVLSTFIDNLITNSQLIDLEDL 124
Query: 529 CLV 537
C+V
Sbjct: 125 CIV 127
[35][TOP]
>UniRef100_UPI0000D55EB0 PREDICTED: similar to exosome component 8 n=1 Tax=Tribolium
castaneum RepID=UPI0000D55EB0
Length = 271
Score = 116 bits (290), Expect = 1e-24
Identities = 50/124 (40%), Positives = 83/124 (66%)
Frame = +1
Query: 163 DAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAI 342
+ ++ + P+++F HL+ +RPDGR+ G+ R +VNLG +STADGSA+AK+G TT++ I
Sbjct: 3 EQYKILHPVKYFRDHLAHKIRPDGREFGEYRPIVVNLGSISTADGSAIAKVGRTTVVCGI 62
Query: 343 RMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLK 522
+ E+ P ++ +EG + +PP+CS RPG P E A V ++ ++D + +S +DLK
Sbjct: 63 KAELCQPKAEAANEGFLIPNVELPPLCSSKFRPGPPTEQAQVATQLVADILKNSDCLDLK 122
Query: 523 ELCL 534
LC+
Sbjct: 123 TLCI 126
[36][TOP]
>UniRef100_Q6PCW8 Exosome component 8 n=1 Tax=Mus musculus RepID=Q6PCW8_MOUSE
Length = 276
Score = 115 bits (288), Expect = 2e-24
Identities = 52/122 (42%), Positives = 80/122 (65%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+LG+ R T VN+G +STADGSAL K+G+TT++ ++
Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGSISTADGSALVKLGNTTVICGVKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P D+PD G + +PP+CS R G P E A V S+ ++D + +S +I ++L
Sbjct: 65 EFAAPPVDAPDRGYVVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[37][TOP]
>UniRef100_Q9D753 Exosome complex exonuclease RRP43 n=5 Tax=Mus musculus
RepID=EXOS8_MOUSE
Length = 276
Score = 115 bits (288), Expect = 2e-24
Identities = 52/122 (42%), Positives = 80/122 (65%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+LG+ R T VN+G +STADGSAL K+G+TT++ ++
Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGSISTADGSALVKLGNTTVICGVKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P D+PD G + +PP+CS R G P E A V S+ ++D + +S +I ++L
Sbjct: 65 EFAAPPVDAPDRGYVVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVVDNSQVIKKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[38][TOP]
>UniRef100_B0CZF3 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0CZF3_LACBS
Length = 276
Score = 114 bits (286), Expect = 3e-24
Identities = 53/131 (40%), Positives = 84/131 (64%)
Frame = +1
Query: 142 LSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGS 321
++T D F+R+ P + ER L+E++RPDGR L ARD VN+G +STADGSAL ++G+
Sbjct: 1 MTTTSSSDIFQRLHPRVYLERFLAENVRPDGRPLNVARDLAVNVGSISTADGSALVRLGN 60
Query: 322 TTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILS 501
TT++ ++ E+ P D G + +P +CSP +PG P+E A V+S RL+D +++
Sbjct: 61 TTVVCGVKAEIAEPELDEGVRGFLVPNLDLPAMCSPRFKPGPPSEEAQVLSDRLNDALVA 120
Query: 502 SGMIDLKELCL 534
S ++ L L +
Sbjct: 121 SNILPLTSLSI 131
[39][TOP]
>UniRef100_Q17NN4 Exosome complex exonuclease rrp43 (Ribosomal RNA processing protein
43) n=1 Tax=Aedes aegypti RepID=Q17NN4_AEDAE
Length = 274
Score = 114 bits (285), Expect = 4e-24
Identities = 50/127 (39%), Positives = 83/127 (65%)
Frame = +1
Query: 154 MEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTML 333
M++ +++I P+++++ +L ++RPDGR++G R +N + TADGSA+ KIG+TT++
Sbjct: 1 MDLKTYKKIHPVKYYKDYLEHNIRPDGREIGDLRPLAINFDSIKTADGSAIVKIGNTTVV 60
Query: 334 AAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMI 513
I+ E+ P PD G + + P+ SP RPG P+E A V S L+D IL+SG +
Sbjct: 61 CGIKAELAPPKPVEPDTGYLVPNIEISPLSSPKYRPGPPSEEAQVYSCSLADAILNSGCV 120
Query: 514 DLKELCL 534
+LK+LC+
Sbjct: 121 NLKDLCI 127
[40][TOP]
>UniRef100_Q2KHU3 Exosome complex exonuclease RRP43 n=2 Tax=Bos taurus
RepID=EXOS8_BOVIN
Length = 276
Score = 114 bits (284), Expect = 6e-24
Identities = 53/122 (43%), Positives = 80/122 (65%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+LG+ R T VN+G + TADGSAL K+G+TT++ I+
Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNVGSIGTADGSALVKLGNTTVICGIKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P TD+PD+G + + P+CS R G P E A V S+ ++D I +S +I ++L
Sbjct: 65 EFGAPPTDAPDKGYVVPNVDLSPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[41][TOP]
>UniRef100_A8IIF8 Predicted protein n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IIF8_CHLRE
Length = 302
Score = 113 bits (283), Expect = 8e-24
Identities = 49/126 (38%), Positives = 82/126 (65%)
Frame = +1
Query: 130 AAQDLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALA 309
AA ++ +++ +AF+R++P ++++R L+E +RPDGR +G+AR + G ++TADGSAL
Sbjct: 9 AAAPVTDDVDAEAFKRLYPDQYYQRFLAEGVRPDGRPIGRARAVTIGAGTITTADGSALV 68
Query: 310 KIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSD 489
K+G TT+LA +R+E+M P +P G + + M P S RPGR + + ++LS
Sbjct: 69 KVGRTTVLAGVRLEIMRPDETAPAAGALVLSVEMAPFSSADYRPGRAPDHVSAVVEKLSS 128
Query: 490 TILSSG 507
+L SG
Sbjct: 129 ALLGSG 134
[42][TOP]
>UniRef100_UPI0000586672 PREDICTED: similar to Exosome component 8 n=1
Tax=Strongylocentrotus purpuratus RepID=UPI0000586672
Length = 275
Score = 113 bits (282), Expect = 1e-23
Identities = 49/122 (40%), Positives = 85/122 (69%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ P+ ++++ L E +RPDGR+LG+ R TI+N+G +STA GSAL K+G+TT++ I+
Sbjct: 5 FKTAQPVEYYKQFLKEEVRPDGRELGEIRSTILNVGSISTAHGSALVKLGNTTVVCGIKG 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E +P+ + P +G + +PP+CS +PG P+ A V S+ ++DT+LSS +++ ++L
Sbjct: 65 EFASPTVEEPKKGYLVPNVDLPPLCSAQFKPGPPSIQAQVTSQLVADTLLSSNLLNYEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[43][TOP]
>UniRef100_UPI0000585FBE PREDICTED: similar to Exosome component 8 n=1
Tax=Strongylocentrotus purpuratus RepID=UPI0000585FBE
Length = 275
Score = 113 bits (282), Expect = 1e-23
Identities = 49/122 (40%), Positives = 85/122 (69%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ P+ ++++ L E +RPDGR+LG+ R TI+N+G +STA GSAL K+G+TT++ I+
Sbjct: 5 FKTAQPVEYYKQFLKEEVRPDGRELGEIRSTILNVGSISTAHGSALVKLGNTTVVCGIKG 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E +P+ + P +G + +PP+CS +PG P+ A V S+ ++DT+LSS +++ ++L
Sbjct: 65 EFASPTVEEPKKGYLVPNVDLPPLCSAQFKPGPPSIQAQVTSQLVADTLLSSNLLNYEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[44][TOP]
>UniRef100_C1C521 Exosome complex exonuclease RRP43 n=1 Tax=Rana catesbeiana
RepID=C1C521_RANCA
Length = 272
Score = 113 bits (282), Expect = 1e-23
Identities = 53/122 (43%), Positives = 79/122 (64%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ + L E RPDGR L + R T +N+G ++TADGSAL KIG+ T++ I+
Sbjct: 5 FKSVEPLEYYRKFLKEKCRPDGRDLSEFRTTTINVGSITTADGSALVKIGNCTVICGIKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E TP D+P++G I + P+CSP RPG P E A V S+ ++D I +S MI ++L
Sbjct: 65 EFATPPIDAPNKGYIVPNVELTPLCSPRFRPGPPGEEAQVASQFIADVIENSQMILKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[45][TOP]
>UniRef100_UPI0000D9E666 PREDICTED: exosome component 8 isoform 1 n=1 Tax=Macaca mulatta
RepID=UPI0000D9E666
Length = 267
Score = 112 bits (281), Expect = 1e-23
Identities = 52/113 (46%), Positives = 77/113 (68%)
Frame = +1
Query: 196 FERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDS 375
F+R L E+ RPDGR+LG+ R T VN+G +STADGSAL K+G+TT++ ++ E P TD+
Sbjct: 5 FKRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPPTDA 64
Query: 376 PDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
PD+G + +PP+CS R G P E A V S+ ++D I +S +I ++LC+
Sbjct: 65 PDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCI 117
[46][TOP]
>UniRef100_UPI00017F0528 PREDICTED: similar to Exosome component 8 n=1 Tax=Sus scrofa
RepID=UPI00017F0528
Length = 246
Score = 112 bits (279), Expect = 2e-23
Identities = 53/122 (43%), Positives = 80/122 (65%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+LG+ R T VN+G + TADGS+L K+G+TT++ I+
Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNVGSIGTADGSSLVKLGNTTVICGIKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P TD+PD+G I + P+CS R G P E A V S+ ++D I +S +I ++L
Sbjct: 65 EFGAPPTDAPDKGYIVPNVDLSPLCSWRFRSGPPGEEAQVASQFIADVIENSQIIQKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[47][TOP]
>UniRef100_Q8AVT6 MGC52847 protein n=1 Tax=Xenopus laevis RepID=Q8AVT6_XENLA
Length = 276
Score = 111 bits (278), Expect = 3e-23
Identities = 51/122 (41%), Positives = 80/122 (65%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+L + R T +N+G ++TADGSAL K+G+ T+L ++
Sbjct: 5 FKTVEPLEYYRRFLKEACRPDGRELTEFRTTTINVGSITTADGSALVKLGNCTVLCGVKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E+ P DSPD+G + + P+CS RPG P E A V S+ ++D I +S M+ ++L
Sbjct: 65 ELAAPPADSPDKGYVVPNVDLTPLCSSQFRPGPPGEEAQVASQFMADVIDNSQMLLKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[48][TOP]
>UniRef100_UPI0000F2CEF8 PREDICTED: similar to Chain G, Structure Of The Human Rna Exosome
Composed Of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42,
Csl4, Rrp4, And Rrp40 n=1 Tax=Monodelphis domestica
RepID=UPI0000F2CEF8
Length = 276
Score = 111 bits (277), Expect = 4e-23
Identities = 52/122 (42%), Positives = 80/122 (65%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+LG+ R T VN+G ++TADGSAL K+G+TT++ ++
Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSITTADGSALVKLGNTTVICGVKG 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P DS ++G I +PP+CS R G P E A V S+ ++D I +S +I ++L
Sbjct: 65 EFAAPPVDSLNKGYIVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[49][TOP]
>UniRef100_UPI0001B09240 CBP-interacting protein 3 isoform 1 n=1 Tax=Mus musculus
RepID=UPI0001B09240
Length = 280
Score = 110 bits (276), Expect = 5e-23
Identities = 52/126 (41%), Positives = 80/126 (63%), Gaps = 4/126 (3%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+LG+ R T VN+G +STADGSAL K+G+TT++ ++
Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGSISTADGSALVKLGNTTVICGVKA 64
Query: 349 EVMTPSTDSPDEGCIAI----EFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMID 516
E P D+PD G + +PP+CS R G P E A V S+ ++D + +S +I
Sbjct: 65 EFAAPPVDAPDRGYVVFLSVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVVDNSQVIK 124
Query: 517 LKELCL 534
++LC+
Sbjct: 125 KEDLCI 130
[50][TOP]
>UniRef100_UPI000194B8DC PREDICTED: similar to exosome component 6 n=1 Tax=Taeniopygia
guttata RepID=UPI000194B8DC
Length = 276
Score = 110 bits (276), Expect = 5e-23
Identities = 51/123 (41%), Positives = 81/123 (65%)
Frame = +1
Query: 166 AFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIR 345
AF+ + PL ++ R L E+ RPDGR+LG+ R T VN+G ++TADGSAL K+G+TT++ ++
Sbjct: 4 AFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSITTADGSALVKLGNTTVICGVK 63
Query: 346 MEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKE 525
E+ P+ DS ++G I +P +C+ R G P E A S+ ++D I +S MI ++
Sbjct: 64 AELAAPAADSANKGYIVPNVELPSLCAERFRSGPPGEEAQAASQFIADVIENSQMIVKED 123
Query: 526 LCL 534
LC+
Sbjct: 124 LCI 126
[51][TOP]
>UniRef100_UPI0000ECD5F1 Exosome complex exonuclease RRP43 (EC 3.1.13.-) (Ribosomal RNA-
processing protein 43) (Exosome component 8) (p9)
(Opa-interacting protein 2). n=1 Tax=Gallus gallus
RepID=UPI0000ECD5F1
Length = 277
Score = 110 bits (274), Expect = 8e-23
Identities = 51/123 (41%), Positives = 81/123 (65%)
Frame = +1
Query: 166 AFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIR 345
AF+ + PL ++ R L E+ RPDGR+LG+ R T VN+G ++TADGSAL K+G+TT++ ++
Sbjct: 4 AFKTVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGSITTADGSALVKLGNTTVICGVK 63
Query: 346 MEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKE 525
E+ P+ DS ++G I +P +CS R G P E A S+ ++D I +S +I ++
Sbjct: 64 AELAAPALDSANKGYIVPNVELPSLCSTRFRSGPPGEEAQAASQFIADVIENSQVIAKED 123
Query: 526 LCL 534
LC+
Sbjct: 124 LCI 126
[52][TOP]
>UniRef100_UPI000051A59D PREDICTED: similar to Exosome complex exonuclease RRP43 (Ribosomal
RNA-processing protein 43) (Exosome component 8) (p9)
(Opa-interacting protein 2) n=1 Tax=Apis mellifera
RepID=UPI000051A59D
Length = 281
Score = 109 bits (273), Expect = 1e-22
Identities = 50/122 (40%), Positives = 80/122 (65%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
++ I P+++ + HL++ +RPDGRQ R VN+ ++ AD SA+ KIG+TT++ I+
Sbjct: 5 YKIIHPVKYLQDHLAQDVRPDGRQFLSFRPISVNISSITHADSSAIFKIGNTTIVCGIKS 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E+ P +SP+ G I +PP+CSP RPG P++ A VI+K + + + +S IDLKEL
Sbjct: 65 ELAVPKAESPECGYIVPNIELPPLCSPKFRPGPPSDQAQVITKLVENILRNSAAIDLKEL 124
Query: 529 CL 534
C+
Sbjct: 125 CV 126
[53][TOP]
>UniRef100_UPI00016E361B UPI00016E361B related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E361B
Length = 277
Score = 108 bits (271), Expect = 2e-22
Identities = 51/116 (43%), Positives = 77/116 (66%)
Frame = +1
Query: 187 LRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPS 366
L ++ R L E+ RPDGR+L + R T +N+G +STADGSAL K+G+TT++ I+ E+ TP+
Sbjct: 11 LEYYRRFLKENCRPDGRELLEFRPTTLNIGSISTADGSALVKVGNTTIICGIKAELATPT 70
Query: 367 TDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
++P +G I +PP+CS RPG P E A S+ ++D I SS +I +LC+
Sbjct: 71 VEAPGKGYIVPNVDLPPLCSSRFRPGPPGEPAQACSQFIADLIESSEIIQTDDLCV 126
[54][TOP]
>UniRef100_Q6DRN4 Opa-interacting protein 2 n=1 Tax=Danio rerio RepID=Q6DRN4_DANRE
Length = 277
Score = 108 bits (269), Expect = 3e-22
Identities = 51/122 (41%), Positives = 79/122 (64%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ PL + L E+ RPDGR+LG+ R T +N+ +STADGSAL KIG+TT++ I+
Sbjct: 5 FKTAEPLEYHRSFLKENCRPDGRELGEFRPTTLNINSISTADGSALVKIGNTTVICGIKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E+ P +++ ++G + +PP+CS R G P E A S+ ++D I SS +I+L+EL
Sbjct: 65 ELAVPPSEAQNKGYLVPNVDLPPLCSSRFRAGPPGEQAQAASQFIADVIESSDLINLEEL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[55][TOP]
>UniRef100_Q4VBT6 Exosome component 8 n=1 Tax=Danio rerio RepID=Q4VBT6_DANRE
Length = 277
Score = 108 bits (269), Expect = 3e-22
Identities = 51/122 (41%), Positives = 79/122 (64%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ PL + L E+ RPDGR+LG+ R T +N+ +STADGSAL KIG+TT++ I+
Sbjct: 5 FKTAEPLEYHRSFLKENCRPDGRELGEFRPTTLNINSISTADGSALVKIGNTTVICGIKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E+ P +++ ++G + +PP+CS R G P E A S+ ++D I SS +I+L+EL
Sbjct: 65 ELAVPPSEAQNKGYLVPNVDLPPLCSSRFRAGPPGEQAQAASQFIADVIESSDLINLEEL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[56][TOP]
>UniRef100_Q4SFZ9 Chromosome 7 SCAF14601, whole genome shotgun sequence. (Fragment)
n=2 Tax=Tetraodon nigroviridis RepID=Q4SFZ9_TETNG
Length = 275
Score = 107 bits (267), Expect = 5e-22
Identities = 50/116 (43%), Positives = 77/116 (66%)
Frame = +1
Query: 187 LRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPS 366
L ++ R L E+ RPDGR+L + R T +N+G +STADGSAL K+G+TT++ I+ E+ P+
Sbjct: 11 LEYYRRFLKENCRPDGRELLEFRPTTLNIGSISTADGSALVKVGNTTIICGIKAELANPT 70
Query: 367 TDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
++P +G I +PP+CS RPG P E A S+ ++D I SS +I ++LC+
Sbjct: 71 VEAPGKGYIVPNVDLPPLCSSRFRPGPPGEQAQACSQFIADLIESSEIIQPEDLCI 126
[57][TOP]
>UniRef100_UPI00006A0D96 Exosc8-prov protein. n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A0D96
Length = 276
Score = 106 bits (265), Expect = 9e-22
Identities = 48/122 (39%), Positives = 79/122 (64%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ + L E+ RPDGR+L + R T +N+G ++TADGSAL K+G+ T+L ++
Sbjct: 5 FKTVEPLEYYRKFLKEACRPDGRELTEFRTTTINVGSITTADGSALVKLGNCTVLCGVKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P D+P++G + + P+CS RPG P E A V S+ ++D I +S M+ ++L
Sbjct: 65 EFTAPPADAPNKGYVVPNVDLTPLCSSQFRPGPPGEEAQVASQFIADVIDNSQMLLKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[58][TOP]
>UniRef100_Q66KK0 Exosc8 protein n=1 Tax=Xenopus (Silurana) tropicalis
RepID=Q66KK0_XENTR
Length = 276
Score = 106 bits (265), Expect = 9e-22
Identities = 48/122 (39%), Positives = 79/122 (64%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ + L E+ RPDGR+L + R T +N+G ++TADGSAL K+G+ T+L ++
Sbjct: 5 FKTVEPLEYYRKFLKEACRPDGRELTEFRTTTINVGSITTADGSALVKLGNCTVLCGVKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P D+P++G + + P+CS RPG P E A V S+ ++D I +S M+ ++L
Sbjct: 65 EFTAPPADAPNKGYVVPNVDLTPLCSSQFRPGPPGEEAQVASQFIADVIDNSQMLLKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[59][TOP]
>UniRef100_Q5PPY0 LOC496046 protein n=1 Tax=Xenopus laevis RepID=Q5PPY0_XENLA
Length = 276
Score = 106 bits (265), Expect = 9e-22
Identities = 49/122 (40%), Positives = 78/122 (63%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E RPDGR+L + R T +N+G ++TADGSAL K+G+ T+L ++
Sbjct: 5 FKTVEPLEYYRRFLKEICRPDGRELTEFRTTTINVGSITTADGSALVKLGNCTVLCGVKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E P D+P++G + + P+CS RPG P E A V S+ ++D I +S M+ ++L
Sbjct: 65 EFAAPPADAPNKGYVVPNVDLSPLCSSQFRPGPPGEEAQVASQFMADVIDNSQMLLKEDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[60][TOP]
>UniRef100_Q4P345 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4P345_USTMA
Length = 332
Score = 104 bits (260), Expect = 3e-21
Identities = 49/130 (37%), Positives = 77/130 (59%)
Frame = +1
Query: 145 STEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGST 324
+ ++ F+R+ P+ + R L S+R DGR L RD + LG +STADGS+ +IG+T
Sbjct: 5 NADLVATTFKRLRPISYLSRFLDASIREDGRPLAAFRDATITLGSISTADGSSFVRIGNT 64
Query: 325 TMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSS 504
+ +AAI+ EV TP P EG + +P +CS +PG P + A V++ RL + SS
Sbjct: 65 SCIAAIKAEVATPQLSRPREGYLIPNVELPAVCSSKFKPGAPGDEAQVLTSRLLALLNSS 124
Query: 505 GMIDLKELCL 534
++D + LC+
Sbjct: 125 NLLDRQLLCI 134
[61][TOP]
>UniRef100_A7MCN4 MGC174638 protein n=1 Tax=Danio rerio RepID=A7MCN4_DANRE
Length = 277
Score = 103 bits (256), Expect = 1e-20
Identities = 49/122 (40%), Positives = 77/122 (63%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ PL + L E+ RPDGR+LG+ R T +N+ +STADGSAL KIG+TT++ I+
Sbjct: 5 FKTAEPLEYHRSFLKENCRPDGRELGEFRPTTLNINSISTADGSALVKIGNTTVICGIKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E+ P +++ ++G + +PP+CS G P E A S+ ++D I SS +I+ +EL
Sbjct: 65 ELAVPPSEAQNKGYLVPNVDLPPLCSSRFGAGPPGEQAQAASQFIADVIESSDLINSEEL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[62][TOP]
>UniRef100_Q7Q0D9 AGAP012402-PA n=1 Tax=Anopheles gambiae RepID=Q7Q0D9_ANOGA
Length = 274
Score = 103 bits (256), Expect = 1e-20
Identities = 43/127 (33%), Positives = 84/127 (66%)
Frame = +1
Query: 154 MEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTML 333
M++ F+ + P+++++ +L ++RPDGR+L + R ++ ++ +ADGSA+ K+G+TT++
Sbjct: 1 MDLKTFKLLHPVKYYKDYLENNIRPDGRELEELRPLAISFDVIKSADGSAIVKVGNTTVV 60
Query: 334 AAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMI 513
I+ E+ TP+ +P G + + P+ SP+ RPG P + A V S+ ++D I ++ I
Sbjct: 61 CGIKAELATPNALAPRHGFLVPNVDLSPVSSPSYRPGPPCDEAQVYSQSVADAISNARCI 120
Query: 514 DLKELCL 534
DL++LC+
Sbjct: 121 DLQQLCI 127
[63][TOP]
>UniRef100_UPI0001B7B58F UPI0001B7B58F related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7B58F
Length = 266
Score = 100 bits (250), Expect = 5e-20
Identities = 50/125 (40%), Positives = 75/125 (60%)
Frame = +1
Query: 160 VDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAA 339
V F+ + PL ++ R L E+ RPDGR+LG+ R T VN G +STADGSAL K+G+ T++
Sbjct: 2 VAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNTGSISTADGSALVKVGNATVICG 61
Query: 340 IRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDL 519
+ E+ P D+PD + +P +CS R G P E A V S+ ++D I S +I
Sbjct: 62 GKAELAAPPVDAPDGRYVVPNVDLPLLCSSRFRTGPPGEEAQVTSQFIADVIEKSQIIKK 121
Query: 520 KELCL 534
++L +
Sbjct: 122 EDLSI 126
[64][TOP]
>UniRef100_UPI0000522EB2 PREDICTED: similar to Exosome complex exonuclease RRP43 (Ribosomal
RNA-processing protein 43) (Exosome component 8) (p9)
(Opa-interacting protein 2) n=1 Tax=Ciona intestinalis
RepID=UPI0000522EB2
Length = 279
Score = 98.2 bits (243), Expect = 3e-19
Identities = 45/125 (36%), Positives = 78/125 (62%)
Frame = +1
Query: 163 DAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAI 342
D F+ I P+ +++ L E++RPD R L + R T +N+G ++TADGSAL KIG+T ++ +
Sbjct: 3 DIFKHIQPVEYYKSFLKENIRPDTRTLQQIRKTTLNVGPITTADGSALVKIGNTMVMCGV 62
Query: 343 RMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLK 522
+ E+ P+ + P +G I +P +CS +PG P A V +K L + I + +++ +
Sbjct: 63 KAELTQPTAEEPKKGIIVPNLDLPALCSSKFKPGPPNTQAQVGTKFLDNLIKIANLVNSE 122
Query: 523 ELCLV 537
+LC+V
Sbjct: 123 DLCIV 127
[65][TOP]
>UniRef100_UPI000186CF32 Exosome complex exonuclease RRP43, putative n=1 Tax=Pediculus
humanus corporis RepID=UPI000186CF32
Length = 276
Score = 97.1 bits (240), Expect = 7e-19
Identities = 44/121 (36%), Positives = 74/121 (61%)
Frame = +1
Query: 175 RIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEV 354
+I P F + L++ +RPDGR L + R +N+ ADGSA+ KIG+T ++ +++E+
Sbjct: 7 KIDPAGFLNKVLAQGVRPDGRALDECRPISINVNSFHNADGSAIVKIGNTAVVCGVKLEL 66
Query: 355 MTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
P ++PD+G + +PP+CS +PG P + A +K +++ +L S IDLK LC+
Sbjct: 67 AKPKAETPDQGYLIPNVDLPPLCSGQYQPGPPCDYAQEATKFVNEILLESQCIDLKALCI 126
Query: 535 V 537
V
Sbjct: 127 V 127
[66][TOP]
>UniRef100_Q10205 Exosome complex component rrp43 n=1 Tax=Schizosaccharomyces pombe
RepID=RRP43_SCHPO
Length = 270
Score = 94.4 bits (233), Expect = 5e-18
Identities = 41/122 (33%), Positives = 74/122 (60%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F++I P ++ L++ +R DGR + + R+ ++N +STA+GSA+ + G + I+
Sbjct: 17 FKKITPEQYLSHLLNQDVRSDGRSVSEFREIVINDNCISTANGSAIIRAGENVFVCGIKA 76
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E+ P +SP+EG I + P+CS +PG P++ A V+S+ L T+ S +I+L+ L
Sbjct: 77 EIAEPFENSPNEGWIVPNLELSPLCSSKFKPGPPSDLAQVVSQELHQTLQQSNLINLQSL 136
Query: 529 CL 534
C+
Sbjct: 137 CI 138
[67][TOP]
>UniRef100_UPI00015B619D PREDICTED: similar to exosome component 1 n=1 Tax=Nasonia
vitripennis RepID=UPI00015B619D
Length = 277
Score = 90.5 bits (223), Expect = 7e-17
Identities = 42/122 (34%), Positives = 71/122 (58%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ I P ++ H + + RPDGR+ R VN+G ++ AD SA+ KIG+T+++ I+
Sbjct: 5 FKTIHPAKYLRDHFASNTRPDGREFISFRPVSVNIGSITQADSSAVFKIGNTSVVCGIKA 64
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E+ +P ++PD G I + P+ S RPG P E +K + +++S +DLK+L
Sbjct: 65 ELASPKAETPDCGFIIPNVDLSPLSSSKFRPGPPGEETQCATKLVERILVNSEAVDLKDL 124
Query: 529 CL 534
C+
Sbjct: 125 CI 126
[68][TOP]
>UniRef100_A5AIZ9 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5AIZ9_VITVI
Length = 1621
Score = 90.1 bits (222), Expect = 9e-17
Identities = 44/62 (70%), Positives = 53/62 (85%)
Frame = +1
Query: 139 DLSTEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIG 318
DLS+EMEVDAFRR+FPLR+ ER L +S+RPD R LG+ARDT + LG V++ADGSALAKIG
Sbjct: 9 DLSSEMEVDAFRRLFPLRYHERFLLDSIRPDARPLGRARDTSLALGAVASADGSALAKIG 68
Query: 319 ST 324
T
Sbjct: 69 CT 70
[69][TOP]
>UniRef100_A8MA85 3' exoribonuclease n=1 Tax=Caldivirga maquilingensis IC-167
RepID=A8MA85_CALMQ
Length = 279
Score = 90.1 bits (222), Expect = 9e-17
Identities = 43/112 (38%), Positives = 68/112 (60%)
Frame = +1
Query: 202 RHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPD 381
R +SE RPD RQL RD + +G++ TADGSAL +G+T ++A I+ E+ P D+P+
Sbjct: 19 RLISEGKRPDDRQLISMRDLTIRVGVIKTADGSALVNLGNTKVIAGIKFELGKPFEDTPN 78
Query: 382 EGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
EG + + PP+ +PT PG P E A I++ + + S I L++L ++
Sbjct: 79 EGNLIVNLETPPLAAPTFEPGPPDENAIEIARIIDRALRHSNYIPLRDLVII 130
[70][TOP]
>UniRef100_UPI0001865001 hypothetical protein BRAFLDRAFT_89561 n=1 Tax=Branchiostoma
floridae RepID=UPI0001865001
Length = 259
Score = 87.0 bits (214), Expect = 8e-16
Identities = 36/86 (41%), Positives = 62/86 (72%)
Frame = +1
Query: 280 VSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEA 459
++TA+GSAL K+G+TT++ I+ E+ P+ + P +G + +PP+CSP RPG P+E
Sbjct: 30 ITTAEGSALVKLGNTTVICGIKAELCNPTAEEPKKGFVVPNVDLPPLCSPRFRPGPPSEQ 89
Query: 460 APVISKRLSDTILSSGMIDLKELCLV 537
A V+S+ ++D I +SG++ L++LC+V
Sbjct: 90 AQVVSQLMADIIENSGVVALEDLCIV 115
[71][TOP]
>UniRef100_UPI0001792B76 PREDICTED: similar to exosome component 8 n=1 Tax=Acyrthosiphon
pisum RepID=UPI0001792B76
Length = 267
Score = 87.0 bits (214), Expect = 8e-16
Identities = 39/114 (34%), Positives = 71/114 (62%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
+ + +L+ + R DGR+L RD +NL + TADGSA+ KIG+T ++ I+ E+ P +
Sbjct: 12 YTKEYLALNKRNDGRELMNFRDASLNLNTIHTADGSAVVKIGNTAVVCGIKAELGVPKAE 71
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+PD G + + +P +CS +RPG P + A ++ L++ + ++DL++LC+
Sbjct: 72 APDIGYLLVNIELPSLCSKKIRPGIPCDEAMQMTSFLNEVCNNCKILDLQQLCI 125
[72][TOP]
>UniRef100_C4WV26 ACYPI003501 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WV26_ACYPI
Length = 267
Score = 87.0 bits (214), Expect = 8e-16
Identities = 39/114 (34%), Positives = 71/114 (62%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
+ + +L+ + R DGR+L RD +NL + TADGSA+ KIG+T ++ I+ E+ P +
Sbjct: 12 YTKEYLALNKRNDGRELMNFRDASLNLNTIHTADGSAVVKIGNTAVVCGIKAELGVPKAE 71
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+PD G + + +P +CS +RPG P + A ++ L++ + ++DL++LC+
Sbjct: 72 APDIGYLLVNIELPSLCSKKIRPGIPCDEAMQMTSFLNEVCNNCKILDLQQLCI 125
[73][TOP]
>UniRef100_C1BRT2 Exosome complex exonuclease RRP43 n=1 Tax=Caligus rogercresseyi
RepID=C1BRT2_9MAXI
Length = 279
Score = 87.0 bits (214), Expect = 8e-16
Identities = 43/129 (33%), Positives = 78/129 (60%), Gaps = 4/129 (3%)
Frame = +1
Query: 163 DAFRRIFPLRFFERHLSESLRPDGRQ--LGKARDTIVNLGLVSTADGSALAKIGSTTMLA 336
+ FRR+ P +F +H+ + LR DGR+ L R ++ G +++ADGSA+ + G TT++
Sbjct: 5 EVFRRVQPKEYFSQHIEKGLRLDGREGGLESIRPISISSGSIASADGSAIVRKGHTTVIC 64
Query: 337 AIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTV--RPGRPAEAAPVISKRLSDTILSSGM 510
I +++ + ++P +G I +P +C P + G AE A +++K + D IL+S +
Sbjct: 65 GITLQIASLDEETPTKGYIVPHVDLPSMCHPRIYKSKGPTAEEAMILTKFIMDVILNSEV 124
Query: 511 IDLKELCLV 537
+D K+LC+V
Sbjct: 125 VDPKDLCIV 133
[74][TOP]
>UniRef100_B6K5V8 Exosome complex exonuclease RRP43 n=1 Tax=Schizosaccharomyces
japonicus yFS275 RepID=B6K5V8_SCHJY
Length = 274
Score = 87.0 bits (214), Expect = 8e-16
Identities = 37/122 (30%), Positives = 69/122 (56%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
++ I P ++ + L +RPDGR + + R +VN +STADGS + + G + + I+
Sbjct: 14 YKSIAPGQYLQHFLDNQVRPDGRTVSEFRPRVVNTQCISTADGSCIVRAGESVFVCGIKA 73
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
E+ P ++P G I M P+C+ +PG P E A V+S++++ + + ++ L+ L
Sbjct: 74 EIAEPELEAPSRGWIVPNVEMGPLCNGKFKPGPPRELAQVVSEQMNQVLEQTCLVPLESL 133
Query: 529 CL 534
C+
Sbjct: 134 CI 135
[75][TOP]
>UniRef100_B4FH89 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FH89_MAIZE
Length = 218
Score = 84.3 bits (207), Expect = 5e-15
Identities = 35/50 (70%), Positives = 43/50 (86%)
Frame = +1
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
C+A+EFHMPPICSP VRPGRP + APVISK L D + SSGM++LK+LCL+
Sbjct: 7 CVAVEFHMPPICSPLVRPGRPTDVAPVISKALEDVLTSSGMLNLKDLCLI 56
[76][TOP]
>UniRef100_Q8TYC2 Probable exosome complex exonuclease 2 n=1 Tax=Methanopyrus
kandleri RepID=ECX2_METKA
Length = 267
Score = 83.6 bits (205), Expect = 8e-15
Identities = 41/104 (39%), Positives = 64/104 (61%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR + R V G++S A+GSAL ++G+T ++ +++EV P DSP+EG +A+
Sbjct: 23 RIDGRDFEEFRPIEVRAGVISKANGSALVRLGNTQLVVGVKLEVGRPYPDSPNEGALAVN 82
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ P+ P+ PG P E A +S+ + I S MIDL+ELC+
Sbjct: 83 AELVPLADPSFEPGPPDENAIELSRVVDRGIRESEMIDLEELCI 126
[77][TOP]
>UniRef100_Q5KMZ6 Opa-interacting protein OIP2, putative n=1 Tax=Filobasidiella
neoformans RepID=Q5KMZ6_CRYNE
Length = 297
Score = 82.4 bits (202), Expect = 2e-14
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 18/140 (12%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQL-------------GKARDTI-----VNLGLVSTAD 294
F+R+ P + R LS RPDGR + A D + +N G +STA
Sbjct: 28 FKRLHPASYLSRFLSSGYRPDGRPILPSSSFQSTASASASAADDVWRQVSINTGSISTAH 87
Query: 295 GSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVIS 474
GSAL ++G TTM+ ++ EV P ++P EG + +P + SP +PG P + A S
Sbjct: 88 GSALVRMGDTTMVCGVKAEVGEPDAEAPGEGFVVPNIDLPALSSPKFKPGPPGDEAQTYS 147
Query: 475 KRLSDTILSSGMIDLKELCL 534
L + ++SS I L L +
Sbjct: 148 NWLYELLVSSKTIPLSSLLI 167
[78][TOP]
>UniRef100_Q54CU6 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum
RepID=Q54CU6_DICDI
Length = 293
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/121 (37%), Positives = 69/121 (57%), Gaps = 9/121 (7%)
Frame = +1
Query: 160 VDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAA 339
++AF++I PL F+ ++L S+RPDGR L R T ++ G ++TADGS+ KIGST+++
Sbjct: 1 MEAFQKIHPLEFYRKYLVRSVRPDGRSLDDIRKTTISTGSITTADGSSFVKIGSTSVVCG 60
Query: 340 IRMEV-MTPSTDSP--------DEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDT 492
+R EV PS D + I I + PICS T +P++ A + RL+
Sbjct: 61 VRAEVGEKPSIDKSKFSTLNVHENKNIFINIELGPICSNTFSSSKPSDIAMSLCSRLNSL 120
Query: 493 I 495
I
Sbjct: 121 I 121
[79][TOP]
>UniRef100_UPI000192764A PREDICTED: similar to Exosome component 8 n=1 Tax=Hydra
magnipapillata RepID=UPI000192764A
Length = 272
Score = 81.3 bits (199), Expect = 4e-14
Identities = 42/127 (33%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIR- 345
F+ PL +++ L E++RPDGR L + R TIVN+ + TA GS L +IG+T ++ I+
Sbjct: 5 FKIARPLEYYKEFLKENIRPDGRALDEYRKTIVNINSIKTASGSGLVRIGNTIVVCGIKA 64
Query: 346 ----MEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMI 513
+ P+ + D +P +CS RPG P++ A +S+ +++T+ + +I
Sbjct: 65 VSLFLNFCLPNVPNVD---------LPALCSHEFRPGPPSDQAQAMSQLVAETVENCKLI 115
Query: 514 DLKELCL 534
+LK+LC+
Sbjct: 116 NLKKLCI 122
[80][TOP]
>UniRef100_Q5JXM0 Putative uncharacterized protein DKFZp564C0482 n=1 Tax=Homo sapiens
RepID=Q5JXM0_HUMAN
Length = 248
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/122 (35%), Positives = 66/122 (54%)
Frame = +1
Query: 169 FRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRM 348
F+ + PL ++ R L E+ RPDGR+LG+ R T VN+G +STADGSAL K+G+TT++ ++
Sbjct: 5 FKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVK- 63
Query: 349 EVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
R G P E A V S+ ++D I +S +I ++L
Sbjct: 64 ---------------------------AFRSGPPGEEAQVASQFIADVIENSQIIQKEDL 96
Query: 529 CL 534
C+
Sbjct: 97 CI 98
[81][TOP]
>UniRef100_A8Q5L5 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS
7966 RepID=A8Q5L5_MALGO
Length = 313
Score = 79.3 bits (194), Expect = 2e-13
Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Frame = +1
Query: 160 VDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTML-A 336
V F+++ P+ + ERHL E +R DGR L + R V G +S GSAL ++G T++ A
Sbjct: 22 VTIFKKLHPVEYLERHLKERIREDGRTLDQLRSVSVATGTLSQPFGSALVRLGEGTLVTA 81
Query: 337 AIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMID 516
++ + P+ + P+EG + + +CSP G P E V++ L + +SG++
Sbjct: 82 SVTARIAHPTLERPNEGFLIPSVDLSSLCSPLYNAGPPEEEGQVLTHNLQMFLNNSGILP 141
Query: 517 LKELCL 534
LC+
Sbjct: 142 RSALCI 147
[82][TOP]
>UniRef100_A5C744 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5C744_VITVI
Length = 674
Score = 79.0 bits (193), Expect = 2e-13
Identities = 40/56 (71%), Positives = 43/56 (76%)
Frame = +1
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
D D G IAIE MPPICSP VRPGRP E AP +SK+LSD ILSS MI+LKEL LV
Sbjct: 365 DIKDGGSIAIEVCMPPICSPLVRPGRPVEEAPFVSKQLSDAILSSSMINLKELSLV 420
[83][TOP]
>UniRef100_O26778 Probable exosome complex exonuclease 2 n=1 Tax=Methanothermobacter
thermautotrophicus str. Delta H RepID=ECX2_METTH
Length = 271
Score = 78.2 bits (191), Expect = 3e-13
Identities = 37/105 (35%), Positives = 63/105 (60%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR L + RD + G++S A+GS+ K+G+T ++ ++ ++ P D+P+ G I
Sbjct: 25 RIDGRSLHEFRDISIETGVISKAEGSSRVKLGNTQIIVGVKPQIGEPFPDTPEMGVILTN 84
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ P+ SPT PG P E + +S+ + I S MIDL++LC++
Sbjct: 85 SELLPMASPTFEPGPPDERSVELSRVVDRCIRESRMIDLEKLCII 129
[84][TOP]
>UniRef100_UPI00019668C3 hypothetical protein METSMIF1_01607 n=1 Tax=Methanobrevibacter
smithii DSM 2374 RepID=UPI00019668C3
Length = 265
Score = 77.4 bits (189), Expect = 6e-13
Identities = 37/104 (35%), Positives = 61/104 (58%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR+L + RD + G++S A+GSA KIG T ++ I+ ++ P D+PD G +
Sbjct: 25 REDGRELDEYRDISIETGVISKAEGSARVKIGDTQVIVGIKPQIGAPFPDTPDLGVLMTN 84
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
M P+ PT PG P+E + +++ + I S ++DL +LC+
Sbjct: 85 CEMLPMADPTFEPGPPSEDSIELARVVDRGIRESELVDLDKLCV 128
[85][TOP]
>UniRef100_C6A455 Probable exosome complex exonuclease 2 n=1 Tax=Thermococcus
sibiricus MM 739 RepID=C6A455_THESM
Length = 269
Score = 75.5 bits (184), Expect = 2e-12
Identities = 42/110 (38%), Positives = 60/110 (54%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L E R DGR L R V ++ A+GSAL K+G+T +L I++E+ P D PD G
Sbjct: 16 LKEDKRIDGRGLEDFRPLTVETNVIEKAEGSALVKLGNTQVLVGIKVELGEPFPDLPDMG 75
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
I P+ SPT PG P E+A +++ + I S IDL++L +V
Sbjct: 76 VITTNVEFVPLASPTFEPGPPDESAIELARIIDRGIRESQAIDLEKLVIV 125
[86][TOP]
>UniRef100_A4RUD5 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RUD5_OSTLU
Length = 285
Score = 74.7 bits (182), Expect = 4e-12
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Frame = +1
Query: 154 MEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTML 333
ME A+ R++P E+ L+ R DGR LG+AR G+ S A GSALAK G+TT
Sbjct: 1 MESAAYARLYPREACEKTLASGARGDGRPLGRARARTCATGVASGALGSALAKHGATTAC 60
Query: 334 AAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMI 513
A + + TP P+EG + I P S R GR + + + ++ ++
Sbjct: 61 AGVTATIATPDATRPEEGFLEIAVDHAPQASEDARDGRTRGRREAAAAACASAVANAAVL 120
Query: 514 --DLKELCL 534
DLK+LC+
Sbjct: 121 GKDLKQLCV 129
[87][TOP]
>UniRef100_Q12ZB6 Archaeal exosome complex exoribonuclease n=1 Tax=Methanococcoides
burtonii DSM 6242 RepID=Q12ZB6_METBU
Length = 259
Score = 74.7 bits (182), Expect = 4e-12
Identities = 37/104 (35%), Positives = 57/104 (54%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR + RD I+ ++ A+GSA +G T +L ++++V +P DS D+G I
Sbjct: 22 REDGRGFDETRDLIIETNVIDKAEGSAKVLLGDTQVLVGVKLQVGSPFADSADKGVIITS 81
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ PI SP G P E A +++ + I SG IDL +LC+
Sbjct: 82 MELNPIASPNFEAGPPREKAIEMARVVDRGIRESGAIDLNKLCI 125
[88][TOP]
>UniRef100_C8S7M7 3' exoribonuclease n=1 Tax=Ferroglobus placidus DSM 10642
RepID=C8S7M7_FERPL
Length = 259
Score = 74.7 bits (182), Expect = 4e-12
Identities = 36/104 (34%), Positives = 61/104 (58%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR+ + R + G++ A+GSAL K+G+T +L ++M+ P D+P++G I
Sbjct: 23 RIDGRKFDEIRKIEIQTGVIEKAEGSALVKLGNTQVLVGVKMQPGEPFPDAPNKGIIITN 82
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ P+ SPT PG P E A +++ + I S +DL++LC+
Sbjct: 83 AELVPLASPTFEPGPPDENAIELARVVDRGIRESEAVDLEKLCI 126
[89][TOP]
>UniRef100_A5UJR8 Ribonuclease PH-related protein n=2 Tax=Methanobrevibacter smithii
RepID=A5UJR8_METS3
Length = 262
Score = 74.7 bits (182), Expect = 4e-12
Identities = 36/104 (34%), Positives = 60/104 (57%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR+L + RD + ++S A+GSA KIG T ++ I+ ++ P D+PD G +
Sbjct: 22 REDGRELDEYRDISIETDVISKAEGSARVKIGDTQVIVGIKPQIGAPFPDTPDLGVLMTN 81
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
M P+ PT PG P+E + +++ + I S ++DL +LC+
Sbjct: 82 CEMLPMADPTFEPGPPSEDSIELARVVDRGIRESELVDLDKLCV 125
[90][TOP]
>UniRef100_B6YSE7 Probable exosome complex exonuclease 2 n=1 Tax=Thermococcus
onnurineus NA1 RepID=ECX2_THEON
Length = 272
Score = 74.7 bits (182), Expect = 4e-12
Identities = 37/110 (33%), Positives = 63/110 (57%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L E R DGR L RD + + ++ A+GSA K+G+T +L I++++ P D P++G
Sbjct: 19 LKEGKRVDGRSLEDYRDLEIKINVIEKAEGSAWVKLGNTQVLVGIKVDMGEPFPDLPEKG 78
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
I + P+ SP+ PG P E A +++ + I SG ++L++L +V
Sbjct: 79 VITTNVELVPLASPSFEPGPPDERAIELARVVDRGIRESGAVELEKLVIV 128
[91][TOP]
>UniRef100_Q8PTT7 Probable exosome complex exonuclease 2 n=1 Tax=Methanosarcina mazei
RepID=ECX2_METMA
Length = 266
Score = 74.7 bits (182), Expect = 4e-12
Identities = 38/104 (36%), Positives = 58/104 (55%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR R+ + ++S A+GSA +G+T +L ++++ TP DS DEG I
Sbjct: 25 RQDGRGFKDFRELKLETNVISKAEGSAKVTLGNTQVLVGVKLQTGTPFPDSQDEGVIITN 84
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ PI SP PG P E A +++ + I SG ID+K+LC+
Sbjct: 85 LELNPIASPEFEPGPPREDAIEMARVVDRGIRESGAIDIKKLCI 128
[92][TOP]
>UniRef100_Q8TGX5 Probable exosome complex exonuclease 2 n=1 Tax=Methanosarcina
acetivorans RepID=ECX2_METAC
Length = 266
Score = 74.3 bits (181), Expect = 5e-12
Identities = 38/104 (36%), Positives = 57/104 (54%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR RD + ++ A+GSA +G+T +L ++++ TP DS DEG I
Sbjct: 25 RQDGRGFKDFRDLKLETNVIVKAEGSAKVTLGNTQVLVGVKLQTGTPFPDSQDEGVIITN 84
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ PI SP PG P E A +++ + I SG ID+K+LC+
Sbjct: 85 LELNPIASPEFEPGPPREEAIEMARVVDRGIRESGAIDIKKLCI 128
[93][TOP]
>UniRef100_UPI000187F4FD hypothetical protein MPER_14569 n=1 Tax=Moniliophthora perniciosa
FA553 RepID=UPI000187F4FD
Length = 81
Score = 73.9 bits (180), Expect = 7e-12
Identities = 31/79 (39%), Positives = 53/79 (67%)
Frame = +1
Query: 262 IVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRP 441
+ +G +STA+GSAL ++G+TT++ ++ E+ P D P++G + +P ICS +P
Sbjct: 2 LFTIGSISTANGSALVRMGNTTVVCGVKAEIAEPELDKPNDGFLVPNIDLPAICSSKFKP 61
Query: 442 GRPAEAAPVISKRLSDTIL 498
G P+E A VIS+RL+D ++
Sbjct: 62 GPPSEEAQVISERLNDALV 80
[94][TOP]
>UniRef100_Q469M2 Ribosomal RNA-processing protein RRP42 n=1 Tax=Methanosarcina
barkeri str. Fusaro RepID=Q469M2_METBF
Length = 260
Score = 73.6 bits (179), Expect = 9e-12
Identities = 38/104 (36%), Positives = 56/104 (53%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR RD + ++ A+GSA +G T +L ++++ TP DS DEG I
Sbjct: 22 RQDGRGFKDFRDIKLETNVIPKAEGSAKVTLGDTQVLVGVKLQPGTPFPDSQDEGVIITN 81
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ PI SP PG P E A +++ + I SG ID+K+LC+
Sbjct: 82 LELNPIASPEFEPGPPREEAIEMARVVDRGIRESGAIDIKKLCI 125
[95][TOP]
>UniRef100_A2BKC1 RNase PH-related exoribonuclease n=1 Tax=Hyperthermus butylicus DSM
5456 RepID=A2BKC1_HYPBU
Length = 328
Score = 73.6 bits (179), Expect = 9e-12
Identities = 36/112 (32%), Positives = 62/112 (55%)
Frame = +1
Query: 199 ERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSP 378
E LS +R DGR+L + R + G + A+GSAL K+G T +LA ++ +++ P D+P
Sbjct: 20 ETLLSRGVRLDGRKLDETRPVEITPGYIDRAEGSALVKLGQTVVLAGVKTDIVAPFPDTP 79
Query: 379 DEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+E + + P+ SPT PG P E A +++ + ++ + L +L L
Sbjct: 80 NEAVLVVHAEFVPLASPTFEPGPPDENAIELARVIDRSLREIKAVALDKLVL 131
[96][TOP]
>UniRef100_B7R2M6 Exosome complex exonuclease RRP43 n=1 Tax=Thermococcus sp. AM4
RepID=B7R2M6_9EURY
Length = 273
Score = 72.8 bits (177), Expect = 1e-11
Identities = 37/110 (33%), Positives = 59/110 (53%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L E R DGR + RD + G + A+GSA ++G T +L I+++V P D PD G
Sbjct: 19 LKEGKRIDGRSFEEYRDIEIKTGFIEKAEGSAWVRLGGTRVLVGIKVDVGEPFPDLPDRG 78
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ + P+ SPT PG P E A +++ + I S ++L++L +V
Sbjct: 79 VMTTNVELVPLASPTFEPGPPDERAIELARVIDRGIRESQAVELEKLVIV 128
[97][TOP]
>UniRef100_B5IVS7 3' exoribonuclease family, domain 2 n=1 Tax=Thermococcus barophilus
MP RepID=B5IVS7_9EURY
Length = 270
Score = 72.8 bits (177), Expect = 1e-11
Identities = 38/110 (34%), Positives = 61/110 (55%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L E R DGR L R V + ++ A+GSA K+G+T +L I++++ P D PD+G
Sbjct: 16 LKEKKRIDGRSLEDLRPLEVKVNVIEKAEGSAWVKLGNTQVLVGIKLDLGEPFPDLPDKG 75
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ + P+ SPT PG P E A +++ + I S IDL++L ++
Sbjct: 76 VMTTNVELVPLASPTFEPGPPDERAIELARVVDRGIRESQAIDLEKLVII 125
[98][TOP]
>UniRef100_B5IEW9 3' exoribonuclease family, domain 1 protein n=1
Tax=Aciduliprofundum boonei T469 RepID=B5IEW9_9EURY
Length = 226
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/115 (31%), Positives = 62/115 (53%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
++ + S+ R DGR + R+ V G + A+GSAL +G+T +L +++E TP
Sbjct: 17 KYIHKLASKGTRVDGRHFDEIRNLTVTKGYIPRAEGSALVNLGNTRVLVGVKIEPGTPFP 76
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
D+P+ G + + P+ SPT PG P E A +++ + I IDL++L +
Sbjct: 77 DTPNMGILTTNAELAPLASPTFEPGPPGEEAIELARVVDRGIREGHAIDLEKLVI 131
[99][TOP]
>UniRef100_B5IEJ7 3' exoribonuclease family, domain 2 n=1 Tax=Aciduliprofundum boonei
T469 RepID=B5IEJ7_9EURY
Length = 270
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/115 (31%), Positives = 62/115 (53%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
++ + S+ R DGR + R+ V G + A+GSAL +G+T +L +++E TP
Sbjct: 17 KYIHKLASKGTRVDGRHFDEIRNLTVTKGYIPRAEGSALVNLGNTRVLVGVKIEPGTPFP 76
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
D+P+ G + + P+ SPT PG P E A +++ + I IDL++L +
Sbjct: 77 DTPNMGILTTNAELAPLASPTFEPGPPGEEAIELARVVDRGIREGHAIDLEKLVI 131
[100][TOP]
>UniRef100_C5A2B8 Probable exosome complex exonuclease 2 n=1 Tax=Thermococcus
gammatolerans EJ3 RepID=ECX2_THEGJ
Length = 273
Score = 72.8 bits (177), Expect = 1e-11
Identities = 37/110 (33%), Positives = 59/110 (53%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L E R DGR + RD + G + A+GSA ++G T +L I+++V P D PD G
Sbjct: 19 LKEGKRIDGRSFEEYRDIEIKTGFIEKAEGSAWVRLGGTRVLVGIKVDVGEPFPDLPDRG 78
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ + P+ SPT PG P E A +++ + I S ++L++L +V
Sbjct: 79 VMTTNVELVPLASPTFEPGPPDERAIELARVIDRGIRESQAVELEKLVIV 128
[101][TOP]
>UniRef100_A8A8Z1 Ribosomal RNA-processing protein RRP42 n=1 Tax=Ignicoccus
hospitalis KIN4/I RepID=A8A8Z1_IGNH4
Length = 276
Score = 72.4 bits (176), Expect = 2e-11
Identities = 39/105 (37%), Positives = 60/105 (57%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R D R+L + R + LG+ A GSAL +IG+T +LA +++EV P D PD G + +
Sbjct: 28 RIDKRRLDQYRPIKITLGVGGKAHGSALVEIGNTKVLAGVKVEVGKPFKDVPDAGVLNVN 87
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ P+ S PG P E A +++ + + G+IDLKEL L+
Sbjct: 88 AELLPLASSEFEPGPPDENAIELARVIDRALREPGVIDLKELVLI 132
[102][TOP]
>UniRef100_B3T6G8 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
marine microorganism HF4000_APKG2H5 RepID=B3T6G8_9ZZZZ
Length = 264
Score = 72.0 bits (175), Expect = 3e-11
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGK----ARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVM 357
+ HL+E D R G+ ARDT + +G++ A+GSA ++G T + A +++++M
Sbjct: 8 KLLRAHLAELAENDERHSGRGRWEARDTELEIGVLPRAEGSARVRMGDTIVYAGVKLQIM 67
Query: 358 TPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
P D P++G + + P+ P PG P+ + + + + I SG ID+ LCL+
Sbjct: 68 VPYPDRPNQGGLMCSAEVRPVAGPNWEPGPPSPESIELGRVVDRGIRESGCIDVDGLCLI 127
[103][TOP]
>UniRef100_Q0W2Y7 Probable exosome complex exonuclease 2 n=1 Tax=uncultured
methanogenic archaeon RC-I RepID=ECX2_UNCMA
Length = 260
Score = 72.0 bits (175), Expect = 3e-11
Identities = 35/104 (33%), Positives = 58/104 (55%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR+ + R V G+++ A+GSA KIG + ++ ++++ P D+PD G I
Sbjct: 23 RADGRKFDEFRAISVETGVINKAEGSARVKIGDSQVVVGVKIQPGEPFPDTPDSGVIITN 82
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ P+ SPT G P E A +++ + + SG IDL +LC+
Sbjct: 83 LELVPLASPTFESGPPREDAIELARVVDRGVRESGAIDLSKLCI 126
[104][TOP]
>UniRef100_Q5JIR7 Probable exosome complex exonuclease 2 n=1 Tax=Thermococcus
kodakarensis RepID=ECX2_PYRKO
Length = 272
Score = 71.6 bits (174), Expect = 3e-11
Identities = 38/110 (34%), Positives = 58/110 (52%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L E R DGR RD + + ++ A+GSA ++G T +L I+ E+ P D PD G
Sbjct: 19 LREGKRIDGRSFEDYRDLEIKVNVIEKAEGSAWVRLGDTQVLVGIKAELGEPFPDLPDRG 78
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
I + P+ SPT PG P E A +++ + I S +DL++L +V
Sbjct: 79 VITTNVELVPLASPTFEPGPPDENAIELARVVDRGIRESQAVDLEKLVIV 128
[105][TOP]
>UniRef100_A9VCN5 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9VCN5_MONBE
Length = 1499
Score = 71.2 bits (173), Expect = 4e-11
Identities = 35/106 (33%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +1
Query: 220 LRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD-SPDEGCIA 396
+RPDGR+L + R T V++ +V +A+GS++ +G T+++A+++ E P + + G +
Sbjct: 1227 VRPDGRELAEPRVTRVSVNVVQSANGSSMVVMGKTSVMASLKAEFANPPLNPNAASGWLV 1286
Query: 397 IEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
MPP+CS T+ PG P+ A +S LSD +L ++ ++L +
Sbjct: 1287 ANVTMPPMCSSTITPGPPSTQARALSTFLSDILLRHNVVRPEQLVI 1332
[106][TOP]
>UniRef100_A4YCV3 Ribosomal RNA-processing protein RRP42 n=1 Tax=Metallosphaera
sedula DSM 5348 RepID=A4YCV3_METS5
Length = 280
Score = 71.2 bits (173), Expect = 4e-11
Identities = 37/109 (33%), Positives = 58/109 (53%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L R DGR+ R + LG ADGSAL K+G TT+LA +++E P D+P++G
Sbjct: 23 LERGTRSDGRKFTDYRPLSITLGYAKKADGSALVKLGDTTVLAGVKVEEDEPYPDTPNQG 82
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ + + P+ T PG P E A +S+ + ++ S +DL L +
Sbjct: 83 NLVVNAELLPLAYETFEPGPPDENAIELSRVVDRSLRDSKAVDLSGLVI 131
[107][TOP]
>UniRef100_A4WM68 Ribosomal RNA-processing protein RRP42 n=1 Tax=Pyrobaculum
arsenaticum DSM 13514 RepID=A4WM68_PYRAR
Length = 276
Score = 71.2 bits (173), Expect = 4e-11
Identities = 36/104 (34%), Positives = 59/104 (56%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR L + R+ + G+V TADGSA K+G T ++A +++ + P D+PDEG + +
Sbjct: 29 RVDGRALDQTREIEIKTGVVKTADGSAEVKLGKTHVIAGVKVGLGQPFPDAPDEGVLVVS 88
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ P SP G P E+A +++ + I G +D K+L +
Sbjct: 89 AEVLPHASPYTEVGPPDESAIELARVVDRGIRHCGYVDFKKLAV 132
[108][TOP]
>UniRef100_Q8ZVN0 Probable exosome complex exonuclease 2 n=1 Tax=Pyrobaculum
aerophilum RepID=ECX2_PYRAE
Length = 274
Score = 71.2 bits (173), Expect = 4e-11
Identities = 38/111 (34%), Positives = 62/111 (55%)
Frame = +1
Query: 202 RHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPD 381
R L+ R DGR + R+ +N+G+V TADGSA K+G T ++A +++ + P D+PD
Sbjct: 22 RLLATKYRVDGRGPEQTRNVEINVGVVKTADGSAEVKLGKTHVVAGVKVGLGQPFPDAPD 81
Query: 382 EGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
EG + + + P SP G P E A +++ + I G +D K+L +
Sbjct: 82 EGVLVVNAEVLPHASPYTEVGPPDEFAIELARVVDRGIRHCGYVDFKKLAV 132
[109][TOP]
>UniRef100_B1Y977 3' exoribonuclease n=1 Tax=Thermoproteus neutrophilus V24Sta
RepID=B1Y977_THENV
Length = 273
Score = 70.5 bits (171), Expect = 7e-11
Identities = 37/112 (33%), Positives = 62/112 (55%)
Frame = +1
Query: 199 ERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSP 378
+R L+ R DGR+ + R + G+V TADGSA K+G T ++A +++ + P D+P
Sbjct: 21 KRLLATRYRVDGREPERVRSVEIRTGVVKTADGSAEVKLGRTHVVAGVKVGLGQPFPDAP 80
Query: 379 DEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
DEG + + + P SP G P E+A +++ + I G +D K+L +
Sbjct: 81 DEGVLVVSAEVLPHASPYTEVGPPDESAIELARVVDRGIRHCGYVDFKKLAV 132
[110][TOP]
>UniRef100_Q9YC05 Probable exosome complex exonuclease 2 n=1 Tax=Aeropyrum pernix
RepID=ECX2_AERPE
Length = 276
Score = 70.5 bits (171), Expect = 7e-11
Identities = 33/109 (30%), Positives = 59/109 (54%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L + RP R L R+ + G++ A+GSAL K+G T ++A ++ V P D+P++G
Sbjct: 23 LRKGWRPGDRDLKTPRNVKIETGIIEKAEGSALVKLGKTQVIAGVKAGVGAPFKDTPNQG 82
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ + P+ SP PG P E A +++ + ++ G +DL+ L +
Sbjct: 83 VLTVHAEFVPLASPVFEPGPPDENAIELARVVDRSLREVGAVDLESLVI 131
[111][TOP]
>UniRef100_Q64D54 3'-5' exoribonuclease n=1 Tax=uncultured archaeon GZfos19A5
RepID=Q64D54_9ARCH
Length = 257
Score = 70.1 bits (170), Expect = 1e-10
Identities = 37/104 (35%), Positives = 57/104 (54%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR + RD V ++ A+GSA KIG T +L +++E+ TP D+PD+G I
Sbjct: 23 REDGRGFREYRDISVERDVIKRAEGSARVKIGDTEVLVGVKVELGTPFPDTPDKGVIITN 82
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ P+ SP G P E + +++ + I S IDL +LC+
Sbjct: 83 AELVPLASPKFESGPPNENSIQLARVVDRGIRGSETIDLDKLCI 126
[112][TOP]
>UniRef100_Q64B51 3'-5' exoribonuclease n=1 Tax=uncultured archaeon GZfos27G5
RepID=Q64B51_9ARCH
Length = 257
Score = 70.1 bits (170), Expect = 1e-10
Identities = 37/104 (35%), Positives = 57/104 (54%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR + RD V ++ A+GSA KIG T +L +++E+ TP D+PD+G I
Sbjct: 23 REDGRGFHEYRDISVERDVIKRAEGSARVKIGDTEVLVGVKVELGTPFPDTPDKGVIITN 82
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ P+ SP G P E + +++ + I S IDL +LC+
Sbjct: 83 AELVPLASPKFESGPPNENSIQLARVVDRGIRGSETIDLDKLCI 126
[113][TOP]
>UniRef100_A3MUP0 Ribosomal RNA-processing protein RRP42 n=1 Tax=Pyrobaculum
calidifontis JCM 11548 RepID=A3MUP0_PYRCJ
Length = 274
Score = 69.3 bits (168), Expect = 2e-10
Identities = 36/109 (33%), Positives = 60/109 (55%)
Frame = +1
Query: 202 RHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPD 381
R ++ R DGR++ + R V G+V TADGSA K+G T ++A +++ + P D+PD
Sbjct: 22 RLIASKARIDGREVDQVRPVEVKTGVVKTADGSAEVKLGKTHVVAGVKIGLGQPFPDAPD 81
Query: 382 EGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
EG + + + P SP G P E A +++ + + G +D K+L
Sbjct: 82 EGVLVVNAEVLPHASPYTEVGPPDEFAIELARVVDRGLRHCGYVDFKKL 130
[114][TOP]
>UniRef100_Q4JB28 Exosome complex exonuclease RRP43-like protein n=1 Tax=Sulfolobus
acidocaldarius RepID=Q4JB28_SULAC
Length = 276
Score = 68.9 bits (167), Expect = 2e-10
Identities = 35/109 (32%), Positives = 62/109 (56%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L +R DGR+ + R V LG A+GSAL K+G+T +LA +++E +P D+P++G
Sbjct: 23 LERGVRLDGRKPNEYRQLKVTLGYAKKAEGSALVKLGNTLVLAGVKLEEDSPYPDTPNQG 82
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ + + P+ T PG P E + +++ + ++ S IDL +L +
Sbjct: 83 NLIVNVELLPLAYETFEPGPPDENSIELARIVDRSLRDSKAIDLSKLVI 131
[115][TOP]
>UniRef100_A3DMV0 Ribosomal RNA-processing protein RRP42 n=1 Tax=Staphylothermus
marinus F1 RepID=A3DMV0_STAMF
Length = 285
Score = 68.9 bits (167), Expect = 2e-10
Identities = 35/110 (31%), Positives = 62/110 (56%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L + R DGR+L + R V L + A+GSA K+G+T ++ +++E+ TP +D P+EG
Sbjct: 23 LKQGERIDGRKLDEYRPIEVFLNPIPKAEGSAAVKLGNTFVITGVKLEIGTPYSDRPNEG 82
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ + P+ SPT PG P E A ++ + ++ I L++L ++
Sbjct: 83 VLQVHAEFVPLASPTFEPGPPDENAIETARVIDRSLREPRAIRLEDLVVI 132
[116][TOP]
>UniRef100_A1RXQ5 Ribosomal RNA-processing protein RRP42 n=1 Tax=Thermofilum pendens
Hrk 5 RepID=A1RXQ5_THEPD
Length = 272
Score = 68.9 bits (167), Expect = 2e-10
Identities = 33/110 (30%), Positives = 63/110 (57%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L++ R DGR+ + R+ + G++ ADGSA +GST ++A +++ + TP D+P+EG
Sbjct: 20 LAKGERLDGRKADQYREIRLEKGIIGKADGSARVFLGSTQVIAGVKLAIGTPFPDAPNEG 79
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ + P+ SP PG P E +++ + S+ ++DL +L ++
Sbjct: 80 VQIVNAELSPVASPFFEPGPPGEEDIELARVVDRGFRSAKVVDLAKLSII 129
[117][TOP]
>UniRef100_A0B8W2 Ribosomal RNA-processing protein RRP42 n=1 Tax=Methanosaeta
thermophila PT RepID=A0B8W2_METTP
Length = 257
Score = 68.6 bits (166), Expect = 3e-10
Identities = 33/105 (31%), Positives = 55/105 (52%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR + R + ++ A+GSAL K+G T ++ I+++ P D+P+ G I
Sbjct: 22 RADGRSFTQYRPIEIERNIIKKAEGSALVKLGKTQVMVGIKIQPGEPFPDAPNRGVIVTN 81
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ P+ SP PG P E +++ + + SG +DL LC+V
Sbjct: 82 AELVPLASPIFEPGPPNEYGIELARVVDRGVRESGSVDLDALCIV 126
[118][TOP]
>UniRef100_Q647V7 3'-5' exoribonuclease n=1 Tax=uncultured archaeon GZfos9D1
RepID=Q647V7_9ARCH
Length = 257
Score = 68.6 bits (166), Expect = 3e-10
Identities = 36/104 (34%), Positives = 57/104 (54%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR + R+ V ++ A+GSA KIG T +L +++E+ TP D+PD+G I
Sbjct: 23 REDGRGFREYREISVERDVIKRAEGSARVKIGDTEVLVGVKVELGTPFPDTPDKGVIITN 82
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ P+ SP G P E + +++ + I S IDL +LC+
Sbjct: 83 AELVPLASPKFESGPPNENSIQLARVVDRGIRGSETIDLDKLCI 126
[119][TOP]
>UniRef100_Q9UXC0 Probable exosome complex exonuclease 2 n=2 Tax=Sulfolobus
solfataricus RepID=ECX2_SULSO
Length = 275
Score = 68.2 bits (165), Expect = 4e-10
Identities = 34/107 (31%), Positives = 60/107 (56%)
Frame = +1
Query: 214 ESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCI 393
+ +R DGR+L R + L ADGSAL K+G+T +LA ++E+ P D+P++G +
Sbjct: 25 KGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNL 84
Query: 394 AIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ + P+ T PG P E A +++ + ++ S +DL +L +
Sbjct: 85 IVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVI 131
[120][TOP]
>UniRef100_Q2H9X2 Putative uncharacterized protein n=1 Tax=Chaetomium globosum
RepID=Q2H9X2_CHAGB
Length = 268
Score = 67.8 bits (164), Expect = 5e-10
Identities = 41/116 (35%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
+F + L E+LR DGRQL + R + G G A +G T +LA EV P
Sbjct: 13 QFVTQALQENLRLDGRQLDQYRPLELTFG---DQYGVADVTLGKTRVLAKATAEVTVPYV 69
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
D P +G I + P+ SP RP E ++S+ L T+ SG +D + LCLV
Sbjct: 70 DRPLDGIFTIATELSPMTSPAFEVNRPTETEVLLSRLLEKTVRRSGALDTESLCLV 125
[121][TOP]
>UniRef100_Q975G9 Probable exosome complex exonuclease 2 n=1 Tax=Sulfolobus tokodaii
RepID=ECX2_SULTO
Length = 275
Score = 67.8 bits (164), Expect = 5e-10
Identities = 34/110 (30%), Positives = 59/110 (53%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L +R DGR+ R V L A+GSAL K+G T +LA +++E P D+P++G
Sbjct: 23 LERGIRLDGRKNSDYRPISVTLNYAKKAEGSALVKLGDTMVLAGVKLEEEEPFPDTPNQG 82
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ + + P+ T PG P E A +++ + ++ S +DL +L ++
Sbjct: 83 NLVVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKAVDLSKLVII 132
[122][TOP]
>UniRef100_C3NHC2 Probable exosome complex exonuclease 2 n=1 Tax=Sulfolobus
islandicus Y.N.15.51 RepID=ECX2_SULIN
Length = 275
Score = 67.4 bits (163), Expect = 6e-10
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR+L R + L ADGSAL K+G+T +LA ++E+ P D+P++G + +
Sbjct: 28 RQDGRKLTDYRPLSITLNYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVN 87
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ P+ T PG P E A +++ + ++ S +DL +L +
Sbjct: 88 VELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVI 131
[123][TOP]
>UniRef100_UPI000023E77B hypothetical protein FG05509.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023E77B
Length = 293
Score = 67.0 bits (162), Expect = 8e-10
Identities = 39/115 (33%), Positives = 58/115 (50%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F + L+E LR DGR+ + R + G G A K G T +LA + EV P TD
Sbjct: 14 FLAQALNEGLRLDGRKFDEFRPLEITFG---DEYGVAEVKYGKTRVLAKVSAEVTVPYTD 70
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
P +G I + P+ +P+ RP+ ++S+ L TI SG +D + LCL+
Sbjct: 71 RPFDGVFTITSELSPMVAPSYEVNRPSLEEVLLSRLLEKTIRRSGALDTESLCLI 125
[124][TOP]
>UniRef100_C4KHE3 Probable exosome complex exonuclease 2 n=3 Tax=Sulfolobus
islandicus RepID=ECX2_SULIK
Length = 275
Score = 67.0 bits (162), Expect = 8e-10
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR+L R + L ADGSAL K+G+T +LA ++E+ P D+P++G + +
Sbjct: 28 RQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVN 87
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ P+ T PG P E A +++ + ++ S +DL +L +
Sbjct: 88 VELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVI 131
[125][TOP]
>UniRef100_C3N5R4 Probable exosome complex exonuclease 2 n=2 Tax=Sulfolobus
islandicus RepID=ECX2_SULIA
Length = 275
Score = 67.0 bits (162), Expect = 8e-10
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR+L R + L ADGSAL K+G+T +LA ++E+ P D+P++G + +
Sbjct: 28 RQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVN 87
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ P+ T PG P E A +++ + ++ S +DL +L +
Sbjct: 88 VELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVI 131
[126][TOP]
>UniRef100_Q649Q1 3'-5' exoribonuclease n=1 Tax=uncultured archaeon GZfos34H10
RepID=Q649Q1_9ARCH
Length = 260
Score = 66.6 bits (161), Expect = 1e-09
Identities = 35/109 (32%), Positives = 58/109 (53%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
+ + R DGR RD IV L+ ADGS +IG T +L +++E P +D+P++G
Sbjct: 18 IEKGKRADGRGFLDFRDIIVERDLIKKADGSTRVQIGDTVVLVGVKVEPGEPFSDTPNKG 77
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ + P+ SP G P E + +++ + I S IDL++LC+
Sbjct: 78 ILMTNAELVPLASPEFESGPPNENSIELARVVDRGIRGSETIDLEKLCI 126
[127][TOP]
>UniRef100_O29756 Probable exosome complex exonuclease 2 n=1 Tax=Archaeoglobus
fulgidus RepID=ECX2_ARCFU
Length = 259
Score = 66.6 bits (161), Expect = 1e-09
Identities = 34/109 (31%), Positives = 59/109 (54%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L ++ R DGR + R + ++ A+GSAL K+G T ++ ++M+ P D+PD G
Sbjct: 18 LRDNERIDGRGFDEFRKVEIIPNVIEKAEGSALVKLGDTQVVVGVKMQPGEPYPDTPDRG 77
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
I + + P+ SPT PG P E + +++ + I S +DL +L +
Sbjct: 78 VIIVNAELVPLASPTFEPGPPDENSIELARVVDRGIRESEAVDLSKLVI 126
[128][TOP]
>UniRef100_A1RSS9 Ribosomal RNA-processing protein RRP42 n=1 Tax=Pyrobaculum
islandicum DSM 4184 RepID=A1RSS9_PYRIL
Length = 274
Score = 66.2 bits (160), Expect = 1e-09
Identities = 34/107 (31%), Positives = 58/107 (54%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L+ R DGR+ + R+ + ++ TADGSA K+G T ++A +++ + P D+PDEG
Sbjct: 24 LATKYRIDGREPERIRNIEIKTSVIKTADGSAEVKLGKTHVVAGVKVSLGQPFPDAPDEG 83
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKEL 528
+ + + P SP G P E A +++ + I G +D K+L
Sbjct: 84 VLVVNAEVLPHASPYTEVGPPDEFAIELARVIDRGIRHCGYVDFKKL 130
[129][TOP]
>UniRef100_Q64CA6 TRNA nucleotidyltransferase n=1 Tax=uncultured archaeon GZfos24D9
RepID=Q64CA6_9ARCH
Length = 260
Score = 66.2 bits (160), Expect = 1e-09
Identities = 35/109 (32%), Positives = 57/109 (52%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
+ + R DGR RD IV L+ ADGS +IG T +L +++E P D+P++G
Sbjct: 18 IEKGKRADGRGFLDFRDIIVERDLIKKADGSTRVQIGDTVVLVGVKVEPGAPFPDTPNKG 77
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ + P+ SP G P E + +++ + I S IDL++LC+
Sbjct: 78 ILMTNAELVPLASPEFESGPPNEDSIELARVVDRGIRGSETIDLEKLCI 126
[130][TOP]
>UniRef100_Q9V118 Probable exosome complex exonuclease 2 n=1 Tax=Pyrococcus abyssi
RepID=ECX2_PYRAB
Length = 274
Score = 66.2 bits (160), Expect = 1e-09
Identities = 35/110 (31%), Positives = 59/110 (53%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L E R D R R + +G++ A+GSAL K+GST +L I+ + P D+P+ G
Sbjct: 19 LKEGKRIDDRGFEDYRPIEIEVGVIEKAEGSALVKLGSTQVLVGIKTSLGEPFPDTPNMG 78
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ + P+ SPT PG P E A +++ + I S ++L+++ +V
Sbjct: 79 VMTTNVELVPLASPTFEPGPPDERAIELARVIDRGIRESKALNLEKMVIV 128
[131][TOP]
>UniRef100_UPI000038E13B exosome complex RNA-binding protein Rrp42 n=1 Tax=Ferroplasma
acidarmanus fer1 RepID=UPI000038E13B
Length = 260
Score = 65.5 bits (158), Expect = 2e-09
Identities = 38/114 (33%), Positives = 57/114 (50%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F + R DGR L R+ + V A GSA+ +IG T ++A I++E P D
Sbjct: 16 FILESIKTGKRLDGRGLQDYREIKITENFVPKAAGSAMVEIGKTKVVAGIKVEEGDPFED 75
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
SPD G +A+ + P+ PT G P+E A S+ + I S M+D +L +
Sbjct: 76 SPDSGVMALNIELLPMAFPTFESGPPSEQAIEYSRVVDRGIRESKMVDTSKLVI 129
[132][TOP]
>UniRef100_Q69T30 Os02g0550700 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q69T30_ORYSJ
Length = 395
Score = 65.5 bits (158), Expect = 2e-09
Identities = 37/115 (32%), Positives = 58/115 (50%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F ER L LR DGR+ R + G DGSA ++G T ++ +++ P D
Sbjct: 16 FIERALQSDLRVDGRRPFDFRRLKILFG---REDGSAEVQLGDTRVMGYATAQLVQPYKD 72
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
P+EG +AI P+ P PGRP E+A + + + + S +D++ LC+V
Sbjct: 73 RPNEGTLAIFTEFSPMADPAFEPGRPGESAIELGRVVDRGLRESRAVDMESLCVV 127
[133][TOP]
>UniRef100_A2X5Y3 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2X5Y3_ORYSI
Length = 408
Score = 65.5 bits (158), Expect = 2e-09
Identities = 37/115 (32%), Positives = 58/115 (50%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F ER L LR DGR+ R + G DGSA ++G T ++ +++ P D
Sbjct: 16 FIERALQSDLRVDGRRPFDFRRLKILFG---REDGSAEVQLGDTRVMGYATAQLVQPYKD 72
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
P+EG +AI P+ P PGRP E+A + + + + S +D++ LC+V
Sbjct: 73 RPNEGTLAIFTEFSPMADPAFEPGRPGESAIELGRVVDRGLRESRAVDMESLCVV 127
[134][TOP]
>UniRef100_Q6L224 Ribonuclease PH n=1 Tax=Picrophilus torridus RepID=Q6L224_PICTO
Length = 260
Score = 65.5 bits (158), Expect = 2e-09
Identities = 36/104 (34%), Positives = 55/104 (52%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR L RD + + A GSA+ ++G T ++A +++E P D+PD+G +A+
Sbjct: 26 RLDGRGLNDFRDIKIFENYIPKASGSAMVELGRTKVVAGVKIEEGEPFPDTPDQGVMALN 85
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
M P+ PT G P E A S+ + I S MID+ L +
Sbjct: 86 IEMLPMAFPTFEAGPPGEEAIEYSRVVDRGIRESKMIDVTRLVI 129
[135][TOP]
>UniRef100_Q6MZC0 3'-5' exoribonuclease n=1 Tax=uncultured archaeon
RepID=Q6MZC0_9ARCH
Length = 260
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/109 (31%), Positives = 57/109 (52%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
+ + R DGR RD IV L+ A+GS +IG T +L +++E P D+P++G
Sbjct: 18 IEKGKRADGRGFLDFRDIIVERDLIKKAEGSTRVQIGDTVVLVGVKVEPGEPFPDTPNKG 77
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ + P+ SP G P E + +++ + I S IDL++LC+
Sbjct: 78 ILMTNAELVPLASPEFESGPPGENSIELARVVDRGIRGSETIDLEKLCI 126
[136][TOP]
>UniRef100_O59224 Probable exosome complex exonuclease 2 n=1 Tax=Pyrococcus
horikoshii RepID=ECX2_PYRHO
Length = 274
Score = 65.1 bits (157), Expect = 3e-09
Identities = 35/110 (31%), Positives = 58/110 (52%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L E R D R R + +G++ A+GSAL K+GST +L I+ + P D+P+ G
Sbjct: 19 LKEGKRIDDRGFEDYRPIEIEVGIIEKAEGSALVKLGSTQVLVGIKTTLGEPFPDTPNMG 78
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ + P+ SPT PG P E A +++ I S ++L+++ +V
Sbjct: 79 VMTTNVELVPLASPTFEPGPPDERAIELARVTDRGIRESRALNLEKMVIV 128
[137][TOP]
>UniRef100_C0PH87 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0PH87_MAIZE
Length = 393
Score = 64.7 bits (156), Expect = 4e-09
Identities = 35/115 (30%), Positives = 58/115 (50%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F E L LR DGR R + G DGS+ ++G T ++ + ++++ P D
Sbjct: 15 FIECALQSDLRVDGRHSFDFRKLKITFG---REDGSSEVQLGETHVMGYVTVQLVQPYRD 71
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
P+EG +AI P+ P+ PGRP E A + + + + S +D++ LC+V
Sbjct: 72 RPNEGTLAIFTEFSPMADPSFEPGRPGELAIELGRVIDRGLRESRAVDMESLCVV 126
[138][TOP]
>UniRef100_B9SYQ9 Exosome complex exonuclease rrp45, putative n=1 Tax=Ricinus
communis RepID=B9SYQ9_RICCO
Length = 463
Score = 64.7 bits (156), Expect = 4e-09
Identities = 33/116 (28%), Positives = 59/116 (50%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
+F E L LR DGR + R + G DGS+ ++G T ++ + +++ P
Sbjct: 17 KFIESALDSDLRIDGRNSHEFRKLTIKFG---REDGSSEVQLGQTHVMGFVTSQLVQPYR 73
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
D P+EG ++I P+ P+ PGRP E+A + + + + S +D + LC++
Sbjct: 74 DRPNEGSLSIFSEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRAVDTESLCVL 129
[139][TOP]
>UniRef100_B8D6B8 Probable exosome complex exonuclease 2 n=1 Tax=Desulfurococcus
kamchatkensis 1221n RepID=B8D6B8_DESK1
Length = 286
Score = 63.5 bits (153), Expect = 9e-09
Identities = 33/111 (29%), Positives = 58/111 (52%)
Frame = +1
Query: 202 RHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPD 381
+ + + R DGR L R V L ++ A GS+L K+G T ++A +++E+ P D P
Sbjct: 21 KSIKKGERIDGRGLTDYRPIEVILNPITKASGSSLVKLGGTQVIAGVKLELEEPFPDRPG 80
Query: 382 EGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
EG + + P+ SP+ PG P E A +++ + ++ S + L L +
Sbjct: 81 EGVLQVHAEFVPLASPSFEPGPPDENAIEVARVIDRSLRESKAVKLDALAI 131
[140][TOP]
>UniRef100_B1L6N6 3' exoribonuclease n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8
RepID=B1L6N6_KORCO
Length = 268
Score = 63.5 bits (153), Expect = 9e-09
Identities = 35/105 (33%), Positives = 55/105 (52%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR L + R V G + A+G A K+G T +L ++ ++ P D+PD+G
Sbjct: 25 RVDGRGLHEYRPIEVLNGTFTKAEGEAWLKLGETQVLVGVKADLGEPFPDTPDKGVFVSN 84
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ P+ SPT PG P E A +++ + I S+ IDL L ++
Sbjct: 85 AELLPVASPTFEPGPPDEGAIELARVVDRAIRSADAIDLGSLVIL 129
[141][TOP]
>UniRef100_Q8U0M0 Probable exosome complex exonuclease 2 n=1 Tax=Pyrococcus furiosus
RepID=ECX2_PYRFU
Length = 277
Score = 63.5 bits (153), Expect = 9e-09
Identities = 34/109 (31%), Positives = 58/109 (53%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L E R D R R V +G++ A+GSAL K+G+T +L I+ + P D+P+ G
Sbjct: 19 LKEKKRIDDRGFEDYRPIEVEVGVIEKAEGSALVKLGNTQVLVGIKATLGEPFPDTPNMG 78
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ + P+ SPT PG P E A +++ + I S ++L+++ +
Sbjct: 79 VMTTNVELVPLASPTFEPGPPDERAIELARVIDRGIRESRALNLEKMVI 127
[142][TOP]
>UniRef100_C7YYT6 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YYT6_NECH7
Length = 293
Score = 63.2 bits (152), Expect = 1e-08
Identities = 37/115 (32%), Positives = 57/115 (49%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F + L E LR DGR+ + R + G G A K G T +LA + EV P +D
Sbjct: 14 FLIQALDEGLRLDGRKFDQFRPLELTFG---DEYGVAEVKYGKTRVLAKVTAEVTVPYSD 70
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
P +G I + P+ +P+ RP+ ++S+ L T+ SG +D + LCL+
Sbjct: 71 RPFDGVFTITSELSPMVAPSYEVNRPSLEEVLLSRLLEKTVRRSGALDTESLCLI 125
[143][TOP]
>UniRef100_UPI00015B5DF5 PREDICTED: similar to SCL75 protein n=1 Tax=Nasonia vitripennis
RepID=UPI00015B5DF5
Length = 412
Score = 62.8 bits (151), Expect = 2e-08
Identities = 34/125 (27%), Positives = 60/125 (48%)
Frame = +1
Query: 163 DAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAI 342
+ F I F + + R DGR L + R +N G T G + +G T A +
Sbjct: 3 ETFISICEKNFVNKAIQTDTRIDGRTLLEPRPLKINFG---TNWGCCVVSLGQTRAAAQV 59
Query: 343 RMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLK 522
++ P P+EG + + + P+ + GR +EAA +I+++L ++ S +DL+
Sbjct: 60 SCDIQQPKASRPNEGMLHVNVELNPLAAQHFESGRQSEAAALINRQLEKSLKESRCVDLE 119
Query: 523 ELCLV 537
LC+V
Sbjct: 120 SLCIV 124
[144][TOP]
>UniRef100_C1E3D3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E3D3_9CHLO
Length = 222
Score = 62.8 bits (151), Expect = 2e-08
Identities = 25/68 (36%), Positives = 43/68 (63%)
Frame = +1
Query: 331 LAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGM 510
+AA+++E P D+PD G + + PP+CS + RPGRP + A +++R+ D +L S
Sbjct: 1 MAAVKLEACQPDPDAPDRGFLDVVVEFPPMCSASTRPGRPNDDAHFVARRIEDALLDSAA 60
Query: 511 IDLKELCL 534
ID ++L +
Sbjct: 61 IDKRKLTI 68
[145][TOP]
>UniRef100_B2AVV7 Predicted CDS Pa_7_1650 n=1 Tax=Podospora anserina
RepID=B2AVV7_PODAN
Length = 297
Score = 62.8 bits (151), Expect = 2e-08
Identities = 39/116 (33%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
+F + L +S+R DGR+L + R + G G A +G T +LA E+ P
Sbjct: 13 QFVLQALHDSVRLDGRELEQYRPLELTFG---DQYGVADVTLGKTRVLAKASAELTVPYA 69
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
D P +G I + P+ SP RP E +IS+ L T+ SG +D + LCLV
Sbjct: 70 DRPLDGIFNIATELSPMTSPAFEVNRPTETEVLISRLLEKTVRRSGALDTESLCLV 125
[146][TOP]
>UniRef100_Q2NEX4 Putative exosome complex, exonuclease 2 subunit n=1
Tax=Methanosphaera stadtmanae DSM 3091
RepID=Q2NEX4_METST
Length = 265
Score = 62.8 bits (151), Expect = 2e-08
Identities = 32/110 (29%), Positives = 58/110 (52%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L++ R D R+ + R+ + + ADGSA+ IG TT++ ++ ++ TP ++P+ G
Sbjct: 17 LNQGKRIDDRKFSEYRNISIKTNYIGKADGSAMVSIGCTTVIVGVKAQMTTPFNNAPNSG 76
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
I + I S G P + A IS+ + I S ++DL +LC++
Sbjct: 77 IIITNTELLAIASRNFEYGPPNKFAVEISRVVDRAIRESPVVDLDKLCVI 126
[147][TOP]
>UniRef100_B3TBC7 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
marine crenarchaeote HF4000_APKG8O8 RepID=B3TBC7_9ARCH
Length = 273
Score = 62.8 bits (151), Expect = 2e-08
Identities = 34/110 (30%), Positives = 59/110 (53%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L E R DGR L + R +++G++ A+GSA ++G T ++A ++++ P D ++G
Sbjct: 19 LQEGKRIDGRALDEHRPLSIDVGVIPHANGSARVRLGDTEVVAGVKIQPDRPFPDMGEKG 78
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ P+ P+V G P I++ + I SGMIDL ++ LV
Sbjct: 79 IFICTAEILPLAHPSVETGPPQPYVIEIARVVDRGIRESGMIDLSQMVLV 128
[148][TOP]
>UniRef100_UPI000198557F PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI000198557F
Length = 467
Score = 62.0 bits (149), Expect = 3e-08
Identities = 33/116 (28%), Positives = 60/116 (51%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
+F E+ L LR DGR+ R + G DGS+ ++G T ++ + +++ P
Sbjct: 17 KFIEKALLSDLRIDGRRPFDFRRISIKFG---REDGSSEVQLGQTHVMGFVTGQLIQPYR 73
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
D P+EG ++I P+ P+ GRP EAA + + + + S +D++ LC++
Sbjct: 74 DRPNEGTLSIYTEFSPMADPSFEAGRPGEAAVELGRVIDRGLRESRAVDMESLCVL 129
[149][TOP]
>UniRef100_C3YZU4 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3YZU4_BRAFL
Length = 444
Score = 62.0 bits (149), Expect = 3e-08
Identities = 35/115 (30%), Positives = 56/115 (48%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F + + + R DGRQ R V+ G+ G + +G T +LA + ++ P +
Sbjct: 13 FILKAIRDRKRIDGRQTYDYRRLKVSFGMER---GCCIVDLGDTKVLAQVSGKIEEPKKN 69
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
P EG I I + P+ SP PGRP E+ +++ L I S +D + LC+V
Sbjct: 70 RPTEGSIIINLELSPMASPAFEPGRPTESGIEMNRILERNIRDSRAVDTESLCIV 124
[150][TOP]
>UniRef100_Q9M209 Nucleolar autoantigen-like protein n=1 Tax=Arabidopsis thaliana
RepID=Q9M209_ARATH
Length = 438
Score = 61.6 bits (148), Expect = 3e-08
Identities = 33/116 (28%), Positives = 58/116 (50%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
+F E L LR DGR L R + G GS+ ++G T ++ + +++ P
Sbjct: 17 KFVETALQSELRVDGRGLYDYRKLTIKFG---KEYGSSEVQLGQTHVMGFVTAQLVQPYK 73
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
D P+EG ++I P+ P+ PGRP E+A + + + + S +D + LC++
Sbjct: 74 DRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRAVDTESLCVL 129
[151][TOP]
>UniRef100_A5BAW4 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5BAW4_VITVI
Length = 476
Score = 61.6 bits (148), Expect = 3e-08
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLG------LVSTADGSALAKIGSTTMLAAIRME 351
+F E+ L LR DGR+ R + G + DGS+ ++G T ++ + +
Sbjct: 17 KFIEKALLSDLRIDGRRPFDFRRISIKFGRQVFIRTICAEDGSSEVQLGQTHVMGFVTGQ 76
Query: 352 VMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELC 531
++ P D P+EG ++I P+ P+ GRP EAA + + + + S +D++ LC
Sbjct: 77 LIQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGEAAVELGRVIDRGLRESRAVDMESLC 136
Query: 532 LV 537
++
Sbjct: 137 VL 138
[152][TOP]
>UniRef100_Q7RZN0 Putative uncharacterized protein n=1 Tax=Neurospora crassa
RepID=Q7RZN0_NEUCR
Length = 297
Score = 61.6 bits (148), Expect = 3e-08
Identities = 40/129 (31%), Positives = 59/129 (45%)
Frame = +1
Query: 151 EMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTM 330
E E A + F L+ + E +R DGR+ + R + G G A +G T +
Sbjct: 4 EAEPSANEKAFLLKALQ---DEQIRLDGREFDQYRPLELTFG---DEYGVANVSLGKTKI 57
Query: 331 LAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGM 510
LA EV P D P +G I + P+ +P RP E ++S+ L T+ SG
Sbjct: 58 LAKASAEVTVPFADRPLDGIFTIATELSPMAAPHFEVNRPTETEVLLSRLLEKTVRRSGA 117
Query: 511 IDLKELCLV 537
+D + LCLV
Sbjct: 118 LDTESLCLV 126
[153][TOP]
>UniRef100_B3TAN8 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
marine crenarchaeote HF4000_APKG8G2 RepID=B3TAN8_9ARCH
Length = 272
Score = 61.6 bits (148), Expect = 3e-08
Identities = 34/109 (31%), Positives = 57/109 (52%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L E R D R L + R +++ G++ A+GSA A++G T +++ I+++ P D D+G
Sbjct: 19 LQEGKRIDDRALDEPRPLVIDTGVIPHANGSARARLGDTEVVSGIKIQPDKPFPDMGDKG 78
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ P+ P+ G P I++ + I SGMIDL +L L
Sbjct: 79 IFICTAEILPLAHPSAETGPPQPNVIEIARVVDRGIRESGMIDLSQLVL 127
[154][TOP]
>UniRef100_Q9LDM2 Nucleolar autoantigen-like protein n=1 Tax=Arabidopsis thaliana
RepID=Q9LDM2_ARATH
Length = 307
Score = 61.2 bits (147), Expect = 4e-08
Identities = 33/116 (28%), Positives = 56/116 (48%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
+F E L LR DGR L R + G GS+ ++G T ++A + +++ P
Sbjct: 17 KFVESALQSELRVDGRGLYDYRKLTIKFG---KEYGSSQVQLGQTHVMAFVTAQLVQPYK 73
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
D P EG +I P+ P+ PG P E+A + + + + S +D + LC++
Sbjct: 74 DRPSEGSFSIFTEFSPMADPSFEPGHPGESAVELGRIIDRALRESRAVDTESLCVL 129
[155][TOP]
>UniRef100_Q8LGD7 Nucleolar autoantigen-like protein n=1 Tax=Arabidopsis thaliana
RepID=Q8LGD7_ARATH
Length = 307
Score = 61.2 bits (147), Expect = 4e-08
Identities = 33/116 (28%), Positives = 56/116 (48%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
+F E L LR DGR L R + G GS+ ++G T ++A + +++ P
Sbjct: 17 KFVESALQSELRVDGRGLYDYRKLTIKFG---KEYGSSQVQLGQTHVMAFVTAQLVQPYK 73
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
D P EG +I P+ P+ PG P E+A + + + + S +D + LC++
Sbjct: 74 DRPSEGSFSIFTEFSPMADPSFEPGHPGESAVELGRIIDRALRESRAVDTESLCVL 129
[156][TOP]
>UniRef100_B3T986 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
marine crenarchaeote HF4000_APKG6J21 RepID=B3T986_9ARCH
Length = 272
Score = 60.8 bits (146), Expect = 6e-08
Identities = 33/109 (30%), Positives = 57/109 (52%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L E R D R L + R +++ G++ A+GSA A++G T +++ I+++ P D D+G
Sbjct: 19 LQEGKRIDDRALDEPRPLVIDTGVIPHANGSARARLGDTEVVSGIKVQPDKPFPDMGDKG 78
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ P+ P+ G P I++ + I SGMIDL ++ L
Sbjct: 79 IFICTAEILPLAHPSAETGPPQPNVIEIARVVDRGIRESGMIDLSQMVL 127
[157][TOP]
>UniRef100_Q5XJQ5 Exosome component 9 n=1 Tax=Danio rerio RepID=Q5XJQ5_DANRE
Length = 393
Score = 60.5 bits (145), Expect = 8e-08
Identities = 32/115 (27%), Positives = 57/115 (49%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F + + E R DGRQ R+ ++ G T G + ++G T +L+ + E++ P
Sbjct: 13 FLLKAIKEKKRLDGRQTYDYRNIKISFG---TDYGCCVVELGKTRVLSQVSCELVPPKDS 69
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
P EG + + P+ SP P R +E ++++L + +S ID + LC+V
Sbjct: 70 RPTEGIVFFNLELSPMASPAFEPNRQSELLVTLNRQLERCLRNSKCIDTESLCVV 124
[158][TOP]
>UniRef100_B9SW53 Exosome complex exonuclease rrp42, putative n=1 Tax=Ricinus
communis RepID=B9SW53_RICCO
Length = 287
Score = 60.5 bits (145), Expect = 8e-08
Identities = 31/102 (30%), Positives = 55/102 (53%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F + ++++LR DGR+ R V G++ A+GSA +IG+T ++A+++ E+ P+
Sbjct: 11 FIQGGINQNLRSDGRKRDAYRPIFVETGVIPQANGSARVRIGATEVIASVKAELGRPNAF 70
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTIL 498
PD+G +AI P+ PT E + +S L +L
Sbjct: 71 QPDKGKVAIFVDCSPVAEPTFEARGGEELSAELSAALQHCLL 112
[159][TOP]
>UniRef100_Q64DM5 TRNA nucleotidyltransferase (Fragment) n=1 Tax=uncultured archaeon
GZfos18B6 RepID=Q64DM5_9ARCH
Length = 238
Score = 60.5 bits (145), Expect = 8e-08
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = +1
Query: 253 RDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPT 432
RD IV L+ A+GS +IG T +L +++E P D+P++G + + P+ SP
Sbjct: 11 RDIIVERDLIKKAEGSTRVQIGDTVVLVGVKVEPGAPFPDTPNKGVLMTNAELVPLASPE 70
Query: 433 VRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
G P E + +++ + I S IDL++LC+
Sbjct: 71 FESGPPGENSIELARVVDRGIRGSETIDLEKLCI 104
[160][TOP]
>UniRef100_UPI0000DB70B0 PREDICTED: similar to exosome component 9 n=1 Tax=Apis mellifera
RepID=UPI0000DB70B0
Length = 396
Score = 60.1 bits (144), Expect = 1e-07
Identities = 32/115 (27%), Positives = 60/115 (52%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F + + + +R DGR L +AR + ++ GS + +G T ++A + ++ P T
Sbjct: 13 FVNKSVEQGIRLDGRSLLEARPVKIYF---ASNWGSCMVLLGQTRVIAQVTCDIQQPKTS 69
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
P+EG + I + P+ + GR +E + +IS++L S IDL+ LC++
Sbjct: 70 RPNEGMLHINVELNPMAAQHFDSGRQSEISILISRQLEKCYQDSKCIDLESLCII 124
[161][TOP]
>UniRef100_B9EPB7 Exosome complex exonuclease RRP45 n=1 Tax=Salmo salar
RepID=B9EPB7_SALSA
Length = 231
Score = 60.1 bits (144), Expect = 1e-07
Identities = 33/115 (28%), Positives = 57/115 (49%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F + + E R DGRQ R ++ G T G +G T ++A + E++TP +
Sbjct: 13 FLLKAIEEKKRLDGRQTYDYRSIKISFG---TDYGCCFVDLGKTRIMAQVSCELITPKEN 69
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
P+EG + + P+ SP GR +E ++++L + +S ID + LC+V
Sbjct: 70 RPNEGIMFFNIELSPMASPAFEMGRQSELLVKLNRQLERCLRNSKCIDTESLCVV 124
[162][TOP]
>UniRef100_C1E415 Predicted protein (Fragment) n=1 Tax=Micromonas sp. RCC299
RepID=C1E415_9CHLO
Length = 291
Score = 60.1 bits (144), Expect = 1e-07
Identities = 35/108 (32%), Positives = 51/108 (47%)
Frame = +1
Query: 214 ESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCI 393
E LR DGR R G DG ++G T +LA + ++ PS +EG I
Sbjct: 23 EELRVDGRGPFDTRPVSYRFG---PKDGMCEVQLGDTRVLAVVSAKLEPPSGARGNEGTI 79
Query: 394 AIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
I P+ SP PGRP E A ++ L I +G +D++ LC++
Sbjct: 80 TINVEFSPMASPNFEPGRPGEQAQELALVLERAIRETGAVDVESLCVL 127
[163][TOP]
>UniRef100_B7PUF0 Exosomal 3'-5' exoribonuclease complex, subunit Rrp43, putative n=1
Tax=Ixodes scapularis RepID=B7PUF0_IXOSC
Length = 425
Score = 58.9 bits (141), Expect = 2e-07
Identities = 34/115 (29%), Positives = 58/115 (50%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F +S + R DGR +R ++LGL G +A +G T +LA + EV+ P +
Sbjct: 14 FVRSAVSSNRRVDGRTSKDSRALRLSLGLDR---GCCVASLGETKVLAQVSSEVIVPKPN 70
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
P+EG + + + P+ +P GR + I++ L + S +DL+ LC+V
Sbjct: 71 RPNEGELFVNLELSPMAAPHFEAGRLGDFGVEIARLLERCVRDSHCVDLESLCIV 125
[164][TOP]
>UniRef100_B3L8J4 Exoribonuclease PH, putative n=1 Tax=Plasmodium knowlesi strain H
RepID=B3L8J4_PLAKH
Length = 281
Score = 58.9 bits (141), Expect = 2e-07
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = +1
Query: 187 LRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPS 366
L++ E ++ ++R DGR L R +N ++ +ADGS+ ++ I++ ++TPS
Sbjct: 4 LKYIENSINSNIRVDGRTLSTYRTIEINKNILVSADGSSSVMNEENNVICGIKLSLLTPS 63
Query: 367 TDSPDEGCIAIEFHMPPICSPTVRPGR-PAEAAPVISKRLSDTILSSGMIDLKELCLV 537
D+PDEG I ++ C +V R + ++S + D L + ID K+LC++
Sbjct: 64 LDAPDEGVINLQID----CPASVAANRIKKDHLQIMSSIIYDLCLKNN-IDRKKLCIL 116
[165][TOP]
>UniRef100_UPI0000D55D29 PREDICTED: similar to AGAP002348-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D55D29
Length = 389
Score = 58.5 bits (140), Expect = 3e-07
Identities = 33/115 (28%), Positives = 55/115 (47%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
+F + LSE R DGR + R + G GS +G+T +LA E+ P +
Sbjct: 15 KFLMKCLSEWRRLDGRSFDEFRPLELKFG---KQWGSCYVSLGNTKVLAQTSCEIQQPKS 71
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
P EG + I + P+ +P GR +E + +++ L + S +DL+ LC+
Sbjct: 72 SRPSEGILNINIELNPLAAPHFEAGRQSELSVQLNRLLEKCVKDSKAVDLESLCI 126
[166][TOP]
>UniRef100_UPI00003ABB32 Exosome complex exonuclease RRP42 (EC 3.1.13.-) (Ribosomal RNA-
processing protein 42) (Exosome component 7) (p8). n=1
Tax=Gallus gallus RepID=UPI00003ABB32
Length = 291
Score = 58.2 bits (139), Expect = 4e-07
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
+ E LR DGR R V +VS GSA K+G T +L ++ E+ TP + PDEG
Sbjct: 18 VQEDLRVDGRGCEDYRCAEVETDVVSNTSGSARVKLGHTDILVGVKAEMGTPKLEKPDEG 77
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTIL----SSGMIDLKELCL 534
+ EF + CS P + ++ T+ S G +DLK LC+
Sbjct: 78 YL--EFFVD--CSANATPEFEGRGGEELGTEIASTLYRIFSSEGSVDLKSLCI 126
[167][TOP]
>UniRef100_A5K843 Exosome complex exonuclease, putative n=1 Tax=Plasmodium vivax
RepID=A5K843_PLAVI
Length = 281
Score = 58.2 bits (139), Expect = 4e-07
Identities = 32/117 (27%), Positives = 62/117 (52%)
Frame = +1
Query: 187 LRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPS 366
L++ E ++ ++R DGR L R +N ++ +ADGS+ ++ I++ ++TPS
Sbjct: 4 LKYIENSINSNIRVDGRTLSTYRTIEINKNILVSADGSSSVMNEENNVICGIKLSLLTPS 63
Query: 367 TDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
D+PDEG I ++ P + V + ++S + D L + ID K++C++
Sbjct: 64 LDAPDEGVINLQIDCP---ASVVANRIKKDHLQIMSSIIYDLCLKNN-IDRKKMCIL 116
[168][TOP]
>UniRef100_Q0U366 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0U366_PHANO
Length = 292
Score = 58.2 bits (139), Expect = 4e-07
Identities = 34/115 (29%), Positives = 55/115 (47%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F ++ L E +R DGR R + G G A ++G T ++A I ++V TP +
Sbjct: 14 FIKQALQEQIRLDGRAFDAFRKVELTFG---EEYGVADVQLGKTRVVARISIDVTTPLPE 70
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+G I P+ SP GRP +A ++S+ L I S +D + LC++
Sbjct: 71 RKFDGVFQIVTEFSPMASPAFEIGRPTDAEVILSRILEKAIRRSNALDTESLCII 125
[169][TOP]
>UniRef100_UPI0001554BC4 PREDICTED: similar to polymyositis/scleroderma autoantigen 1 n=1
Tax=Ornithorhynchus anatinus RepID=UPI0001554BC4
Length = 439
Score = 57.4 bits (137), Expect = 6e-07
Identities = 30/116 (25%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ+ R+ ++ G T G + ++G T +L + E++ P
Sbjct: 12 RFLLRAIEEKKRLDGRQIYDYRNIKISFG---TDYGCCIVELGKTRVLGQVSCELVAPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + SP PGR ++ +++ L + +S +D + LC++
Sbjct: 69 NRATEGILFFNLELSQMASPAFEPGRQSDLLVKLNRLLERCLRNSKCVDTESLCVI 124
[170][TOP]
>UniRef100_B9GIG3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GIG3_POPTR
Length = 382
Score = 57.4 bits (137), Expect = 6e-07
Identities = 32/116 (27%), Positives = 59/116 (50%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
+F E L+ +LR DGR + R + G A GS+ ++G T ++ + +++ P
Sbjct: 17 KFIETALASNLRIDGRNPLEYRKITIKFGR-RVAYGSSEVQLGQTHVMGFVTGQLVQPYQ 75
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
D +EG + I P+ P+ PGRP E+A + + + + S +D + LC++
Sbjct: 76 DRRNEGMLLIFTEFSPMADPSFEPGRPGESAVELGRIVDRGLRESRAVDTESLCVL 131
[171][TOP]
>UniRef100_B7FKE6 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FKE6_MEDTR
Length = 286
Score = 57.4 bits (137), Expect = 6e-07
Identities = 33/101 (32%), Positives = 54/101 (53%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F E ++ LR DGR+ R +V G++ A+GSA +IG+T ++A+++ E+ PS
Sbjct: 11 FIEGGITHDLRCDGRKRLTYRPILVETGVIPQANGSARVRIGATEVIASVKAELGKPSLM 70
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTI 495
PD+G ++I CS T P A +S LS+ +
Sbjct: 71 QPDKGKVSIYID----CSSTAEPAFEGRGADWLSADLSNAL 107
[172][TOP]
>UniRef100_B7FK89 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FK89_MEDTR
Length = 286
Score = 57.4 bits (137), Expect = 6e-07
Identities = 33/101 (32%), Positives = 54/101 (53%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F E ++ LR DGR+ R +V G++ A+GSA +IG+T ++A+++ E+ PS
Sbjct: 11 FIEGGIAHDLRCDGRKRLTYRPILVETGVIPQANGSARVRIGATEVIASVKAELGKPSLM 70
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTI 495
PD+G ++I CS T P A +S LS+ +
Sbjct: 71 QPDKGKVSIYID----CSSTAEPAFEGRGADWLSADLSNAL 107
[173][TOP]
>UniRef100_A7AUY6 3' exoribonuclease family, domain 1 containing protein n=1
Tax=Babesia bovis RepID=A7AUY6_BABBO
Length = 196
Score = 57.4 bits (137), Expect = 6e-07
Identities = 23/81 (28%), Positives = 43/81 (53%)
Frame = +1
Query: 295 GSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVIS 474
G+ + +G T + A+ E++ P+ + P EG + + P+CS PG+ ++ IS
Sbjct: 55 GNVIVSLGDTIVFVAVSSEIVPPNVEHPTEGIVTFSVELSPMCSLNYEPGKASDVEQEIS 114
Query: 475 KRLSDTILSSGMIDLKELCLV 537
+ SG+ID++ LC+V
Sbjct: 115 YAIEKIYKDSGIIDVESLCIV 135
[174][TOP]
>UniRef100_A9A5D0 3' exoribonuclease n=1 Tax=Nitrosopumilus maritimus SCM1
RepID=A9A5D0_NITMS
Length = 272
Score = 57.4 bits (137), Expect = 6e-07
Identities = 29/109 (26%), Positives = 55/109 (50%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L + R DGR L ++R+ + + A+GSA ++G T ++ ++++ P D+ D+G
Sbjct: 19 LEQGKRVDGRALDESREVSIETNAIPKANGSARVRLGDTEVVCGVKIQPDRPFPDTGDKG 78
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ P+ PTV G P +++ + I S MID+ +L +
Sbjct: 79 LFICTAELLPLSHPTVETGPPGPEVIELARVVDRGIRESHMIDVSQLVI 127
[175][TOP]
>UniRef100_Q9SSE1 MLP3.20 protein n=1 Tax=Arabidopsis thaliana RepID=Q9SSE1_ARATH
Length = 297
Score = 57.0 bits (136), Expect = 8e-07
Identities = 31/98 (31%), Positives = 52/98 (53%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F + +++ LR DGR+ R V G++ A+GSA +IG T ++A+++ E+ PS+
Sbjct: 10 FIKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVRIGGTDVIASVKAEIGRPSSL 69
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLS 486
PD+G +A+ CSPT P +S L+
Sbjct: 70 QPDKGKVAVFID----CSPTAEPTFGGRGGEELSSELA 103
[176][TOP]
>UniRef100_Q9SFD4 Putative 3' exoribonuclease n=1 Tax=Arabidopsis thaliana
RepID=Q9SFD4_ARATH
Length = 293
Score = 57.0 bits (136), Expect = 8e-07
Identities = 31/98 (31%), Positives = 52/98 (53%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F + +++ LR DGR+ R V G++ A+GSA +IG T ++A+++ E+ PS+
Sbjct: 10 FIKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVRIGGTDVIASVKAEIGRPSSL 69
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLS 486
PD+G +A+ CSPT P +S L+
Sbjct: 70 QPDKGKVAVFID----CSPTAEPTFGGRGGEELSSELA 103
[177][TOP]
>UniRef100_Q9FPI0 AT3g07750 n=1 Tax=Arabidopsis thaliana RepID=Q9FPI0_ARATH
Length = 286
Score = 57.0 bits (136), Expect = 8e-07
Identities = 31/98 (31%), Positives = 52/98 (53%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F + +++ LR DGR+ R V G++ A+GSA +IG T ++A+++ E+ PS+
Sbjct: 10 FIKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVRIGGTDVIASVKAEIGRPSSL 69
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLS 486
PD+G +A+ CSPT P +S L+
Sbjct: 70 QPDKGKVAVFID----CSPTAEPTFGGRGGEELSSELA 103
[178][TOP]
>UniRef100_Q6B7Z6 Polymyositis/scleroderma autoantigen 1 n=1 Tax=Gallus gallus
RepID=Q6B7Z6_CHICK
Length = 440
Score = 56.6 bits (135), Expect = 1e-06
Identities = 31/116 (26%), Positives = 56/116 (48%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G G + ++G T +L + E++ P
Sbjct: 12 RFLLRAIQERKRLDGRQCYDYRNVRISFG---PEHGCCVVELGKTRVLGQVSCELVPPKP 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + P+ +P PGR +E +++ + + +S ID + LC+V
Sbjct: 69 NRATEGILFCNLELSPMAAPGFEPGRQSELLVKVNRLIERCLRNSKCIDTESLCVV 124
[179][TOP]
>UniRef100_A0RXU0 RNase PH-related exoribonuclease n=1 Tax=Cenarchaeum symbiosum
RepID=A0RXU0_CENSY
Length = 270
Score = 56.6 bits (135), Expect = 1e-06
Identities = 31/110 (28%), Positives = 53/110 (48%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
L R DGR+L + R + + A+GSA +G T ++ ++++ P D D G
Sbjct: 19 LERGERIDGRRLDEPRKLTIETNAIPKAEGSARVHLGRTDVVTGVKVQPDRPFPDVGDRG 78
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ P+ P V G P+ A +++ + I SGM+DL +L L+
Sbjct: 79 IFICTAEILPLAHPDVETGPPSPAVIELARVVDRGIRESGMVDLSKLVLL 128
[180][TOP]
>UniRef100_UPI0000F2D5AE PREDICTED: similar to polymyositis/scleroderma autoantigen 1
isoform 2 n=1 Tax=Monodelphis domestica
RepID=UPI0000F2D5AE
Length = 436
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIKISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[181][TOP]
>UniRef100_UPI0000E2056E PREDICTED: similar to exosome component 9 isoform 2 n=1 Tax=Pan
troglodytes RepID=UPI0000E2056E
Length = 341
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[182][TOP]
>UniRef100_UPI0000E2056D PREDICTED: exosome component 9 isoform 7 n=1 Tax=Pan troglodytes
RepID=UPI0000E2056D
Length = 387
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[183][TOP]
>UniRef100_UPI0000E2056C PREDICTED: exosome component 9 isoform 5 n=1 Tax=Pan troglodytes
RepID=UPI0000E2056C
Length = 363
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[184][TOP]
>UniRef100_UPI0000E2056B PREDICTED: exosome component 9 isoform 3 n=1 Tax=Pan troglodytes
RepID=UPI0000E2056B
Length = 402
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[185][TOP]
>UniRef100_UPI0000E2056A PREDICTED: exosome component 9 isoform 6 n=1 Tax=Pan troglodytes
RepID=UPI0000E2056A
Length = 439
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[186][TOP]
>UniRef100_UPI0000E20569 PREDICTED: exosome component 9 isoform 4 n=1 Tax=Pan troglodytes
RepID=UPI0000E20569
Length = 456
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[187][TOP]
>UniRef100_UPI0000D9B21B PREDICTED: similar to exosome component 9 isoform 2 n=1 Tax=Macaca
mulatta RepID=UPI0000D9B21B
Length = 442
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[188][TOP]
>UniRef100_UPI0000D94A54 PREDICTED: similar to polymyositis/scleroderma autoantigen 1
isoform 1 n=1 Tax=Monodelphis domestica
RepID=UPI0000D94A54
Length = 438
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIKISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[189][TOP]
>UniRef100_UPI00006039D6 PREDICTED: similar to polymyositis scleroderma overlap syndrome
(PM-SCL) antigen 1 a isoform 6 n=1 Tax=Mus musculus
RepID=UPI00006039D6
Length = 437
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[190][TOP]
>UniRef100_UPI00005A3881 PREDICTED: similar to exosome component 9 isoform 2 n=1 Tax=Canis
lupus familiaris RepID=UPI00005A3881
Length = 403
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIKISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[191][TOP]
>UniRef100_UPI0000EB167F Exosome complex exonuclease RRP45 (EC 3.1.13.-) (Exosome component
9) (Polymyositis/scleroderma autoantigen 1) (Autoantigen
PM/Scl 1) (Polymyositis/scleroderma autoantigen 75 kDa)
(PM/Scl-75) (P75 polymyositis-scleroderma overlap
syndrome-associated autoa n=1 Tax=Canis lupus familiaris
RepID=UPI0000EB167F
Length = 462
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIKISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[192][TOP]
>UniRef100_UPI00004BCFCA PREDICTED: similar to exosome component 9 isoform 1 n=1 Tax=Canis
lupus familiaris RepID=UPI00004BCFCA
Length = 440
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIKISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[193][TOP]
>UniRef100_UPI000179ED1C hypothetical protein LOC508005 n=1 Tax=Bos taurus
RepID=UPI000179ED1C
Length = 442
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIKISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[194][TOP]
>UniRef100_B2RY30 Exosc9 protein n=1 Tax=Mus musculus RepID=B2RY30_MOUSE
Length = 438
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[195][TOP]
>UniRef100_Q4QR75 Exosome complex exonuclease RRP45 n=1 Tax=Rattus norvegicus
RepID=EXOS9_RAT
Length = 437
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[196][TOP]
>UniRef100_Q9JHI7 Exosome complex exonuclease RRP45 n=1 Tax=Mus musculus
RepID=EXOS9_MOUSE
Length = 438
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[197][TOP]
>UniRef100_Q3SWZ4 Exosome complex exonuclease RRP45 n=1 Tax=Bos taurus
RepID=EXOS9_BOVIN
Length = 440
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIKISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[198][TOP]
>UniRef100_UPI000194C290 PREDICTED: exosome component 9 n=1 Tax=Taeniopygia guttata
RepID=UPI000194C290
Length = 434
Score = 55.8 bits (133), Expect = 2e-06
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Frame = +1
Query: 220 LRPDGRQLGKARDTIVNLGLVSTAD-GSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIA 396
+R DGRQ R+ V+ G AD G + ++G T +LA + E++ P P EG +
Sbjct: 16 MRLDGRQCYDYRNIRVSFG----ADRGCCMVELGRTRVLAQVSCELVPPKPSRPTEGVLF 71
Query: 397 IEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ P+ +P + PGR +E +++ L + S I+ + LC+V
Sbjct: 72 FNLELSPMAAPGLEPGRQSELVVSLNRLLERCLRDSKCIETESLCVV 118
[199][TOP]
>UniRef100_UPI000155DE54 PREDICTED: similar to Exosome component 9 n=1 Tax=Equus caballus
RepID=UPI000155DE54
Length = 440
Score = 55.8 bits (133), Expect = 2e-06
Identities = 31/116 (26%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIKISFG---TDYGCCVVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ L + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVV 124
[200][TOP]
>UniRef100_B6T4R9 Exosome complex exonuclease RRP42 n=1 Tax=Zea mays
RepID=B6T4R9_MAIZE
Length = 287
Score = 55.8 bits (133), Expect = 2e-06
Identities = 32/98 (32%), Positives = 53/98 (54%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F +++ LR DGR+ + R V G++ A+GSA ++G+T ++A+++ E+ PS
Sbjct: 11 FIRGGIAQDLRTDGRRRLQFRSLSVQTGVIPQANGSARVRLGATDIIASVKAELGKPSIL 70
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLS 486
PD+G +AI CSPT P + +S LS
Sbjct: 71 HPDKGKVAIFVD----CSPTAEPLFEGRGSEELSAELS 104
[201][TOP]
>UniRef100_C7DI02 3' exoribonuclease n=1 Tax=Candidatus Micrarchaeum acidiphilum
ARMAN-2 RepID=C7DI02_9EURY
Length = 258
Score = 55.8 bits (133), Expect = 2e-06
Identities = 31/107 (28%), Positives = 54/107 (50%)
Frame = +1
Query: 214 ESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCI 393
E R D R RD ++ G++ A+GSA A +G+T +LA +++ D+PD+G +
Sbjct: 18 EGKREDSRGSMDFRDLKISRGVIDHAEGSAQADLGATKVLAGVKLVQEDVYEDTPDQGNL 77
Query: 394 AIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ + P+ + G P+ A + + + I + IDLK L L
Sbjct: 78 VVSAELLPLAAAEYETGPPSPEAIELGRVVDRAIRAGNCIDLKSLLL 124
[202][TOP]
>UniRef100_O74918 Exosome complex component rrp45 n=1 Tax=Schizosaccharomyces pombe
RepID=RRP45_SCHPO
Length = 291
Score = 55.8 bits (133), Expect = 2e-06
Identities = 33/115 (28%), Positives = 51/115 (44%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F L + LR DGRQL R + G G G T ++A I E+ P TD
Sbjct: 14 FVLNSLEKGLRLDGRQLSDFRSLEIQFG---KEYGQVDVSFGHTRVMARITTEITKPYTD 70
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
P +G +I + P+ GR ++ VIS+ + + S +D + LC++
Sbjct: 71 RPFDGIFSITTELTPLAYSAFEAGRVSDQEIVISRLIEKAVRRSNALDTESLCII 125
[203][TOP]
>UniRef100_UPI000186CA51 Exosome complex exonuclease RRP45, putative n=1 Tax=Pediculus
humanus corporis RepID=UPI000186CA51
Length = 349
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/115 (27%), Positives = 55/115 (47%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F + SE R DGR+L RD ++ G G +G + +++ ++ E+ P
Sbjct: 13 FILKAASECKRLDGRKLEGFRDLKIHFG---KDWGLCYVSLGESKVVSQVKCEIQEPQAV 69
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
P+EG + + + SP + PGR + + I + L + S IDL+ LC+V
Sbjct: 70 RPNEGLFFMNVELSLMASPYIEPGRASNLSTHIQRLLDKCLYDSKAIDLESLCIV 124
[204][TOP]
>UniRef100_B4DXG8 cDNA FLJ55260, highly similar to Exosome complex exonuclease RRP45
(EC 3.1.13.-) n=1 Tax=Homo sapiens RepID=B4DXG8_HUMAN
Length = 392
Score = 55.5 bits (132), Expect = 2e-06
Identities = 30/116 (25%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ + + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVV 124
[205][TOP]
>UniRef100_A5PLM5 Exosome component 9 n=1 Tax=Homo sapiens RepID=A5PLM5_HUMAN
Length = 439
Score = 55.5 bits (132), Expect = 2e-06
Identities = 30/116 (25%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ + + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVV 124
[206][TOP]
>UniRef100_B2WHA8 3' exoribonuclease n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP
RepID=B2WHA8_PYRTR
Length = 291
Score = 55.5 bits (132), Expect = 2e-06
Identities = 33/115 (28%), Positives = 54/115 (46%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F ++ L E +R D R R + G G A ++G T ++A I ++V TP +
Sbjct: 14 FIKQALQEQIRIDRRAFDAFRPLELTFG---DEYGVADVQLGKTRVIARISVDVTTPLPE 70
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+G I P+ SP GRP +A ++S+ L I S +D + LC++
Sbjct: 71 RKFDGIFQIVTEFSPMASPAFEVGRPTDAEVILSRILEKAIRRSNALDTESLCII 125
[207][TOP]
>UniRef100_Q06265-2 Isoform 2 of Exosome complex exonuclease RRP45 n=1 Tax=Homo sapiens
RepID=Q06265-2
Length = 456
Score = 55.5 bits (132), Expect = 2e-06
Identities = 30/116 (25%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ + + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVV 124
[208][TOP]
>UniRef100_Q06265 Exosome complex exonuclease RRP45 n=1 Tax=Homo sapiens
RepID=EXOS9_HUMAN
Length = 439
Score = 55.5 bits (132), Expect = 2e-06
Identities = 30/116 (25%), Positives = 57/116 (49%)
Frame = +1
Query: 190 RFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPST 369
RF R + E R DGRQ R+ ++ G T G + ++G T +L + E+++P
Sbjct: 12 RFLLRAIEEKKRLDGRQTYDYRNIRISFG---TDYGCCIVELGKTRVLGQVSCELVSPKL 68
Query: 370 DSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
+ EG + + + +P PGR ++ +++ + + +S ID + LC+V
Sbjct: 69 NRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVV 124
[209][TOP]
>UniRef100_A9SP02 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SP02_PHYPA
Length = 276
Score = 55.1 bits (131), Expect = 3e-06
Identities = 26/82 (31%), Positives = 44/82 (53%)
Frame = +1
Query: 292 DGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVI 471
DGS ++G T +LA ++ E+ P D +EG +AI P+ P PGRP+E A +
Sbjct: 45 DGSVEVQLGQTRVLAVVKGEITQPYPDRGNEGSLAIFTEFSPMGDPAFEPGRPSEMAVEL 104
Query: 472 SKRLSDTILSSGMIDLKELCLV 537
+ + + S +D + LC++
Sbjct: 105 GRIIDRGLRESRAVDTESLCIL 126
[210][TOP]
>UniRef100_Q9HIP1 Probable exosome complex exonuclease 2 n=1 Tax=Thermoplasma
acidophilum RepID=ECX2_THEAC
Length = 260
Score = 55.1 bits (131), Expect = 3e-06
Identities = 30/104 (28%), Positives = 54/104 (51%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR + R+ + + A+GSA +G+T ++A +++E P D+PD+G +
Sbjct: 26 RIDGRLPDEFRELTIIENYIPRANGSAYVALGNTRVVAGVKIEAGEPFPDTPDQGVLTTN 85
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ PI P+ G P + A +S+ + I S MI ++L +
Sbjct: 86 VELLPIAFPSFEAGPPNDLAIEVSRVVDRGIRESKMISPEKLVI 129
[211][TOP]
>UniRef100_UPI000192526C PREDICTED: similar to Exosome complex exonuclease RRP42 n=1
Tax=Hydra magnipapillata RepID=UPI000192526C
Length = 279
Score = 54.7 bits (130), Expect = 4e-06
Identities = 34/115 (29%), Positives = 50/115 (43%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F + E R DGR R V G++S GSA K+ T +L ++ E+ P
Sbjct: 13 FIVSGIEEDFRTDGRSCNDYRAITVQTGIISNTSGSAQVKLAGTNVLIGVKAEISEPLPS 72
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
P+ G + SP E A +S L +T SG IDL++LC++
Sbjct: 73 KPNLGKVEFFVDCSANASPIFEGRGGDELAFELSAALQNTF--SGAIDLEKLCII 125
[212][TOP]
>UniRef100_UPI000180B7A0 PREDICTED: similar to Exosome component 9 n=1 Tax=Ciona
intestinalis RepID=UPI000180B7A0
Length = 385
Score = 54.7 bits (130), Expect = 4e-06
Identities = 28/114 (24%), Positives = 57/114 (50%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F L++ +R DGR + + R ++ L G + +G T ++A + E+ P
Sbjct: 15 FVVEALTKKIRIDGRGMLEYRGITIHFSL---DHGCCVVNMGGTKVMAQVAAELCRPRES 71
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
EG + ++ M + +P + P +P ++ + + L +I+ S +DL+ELC+
Sbjct: 72 RQSEGSLGVQVEMSMMAAPHLDPAKPGDSGAELQQMLERSIVMSQAVDLEELCV 125
[213][TOP]
>UniRef100_C1MRL3 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MRL3_9CHLO
Length = 292
Score = 54.7 bits (130), Expect = 4e-06
Identities = 32/108 (29%), Positives = 49/108 (45%)
Frame = +1
Query: 214 ESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCI 393
E +R D R AR+ G DG +G T +LA ++ P +EG +
Sbjct: 25 EDIRIDLRGPFDAREVAYRFG---PKDGVCEVSLGKTRVLAVTSAKLEPPGGGRSNEGSV 81
Query: 394 AIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLV 537
I P+ SP PGRP E A ++ L I +G +D++ LC++
Sbjct: 82 TINVEFSPMASPNFEPGRPGEEASELAVVLERAIRETGAVDVESLCVL 129
[214][TOP]
>UniRef100_B9IAS5 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IAS5_POPTR
Length = 287
Score = 54.7 bits (130), Expect = 4e-06
Identities = 29/102 (28%), Positives = 53/102 (51%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F + + ++LR DGR+ R + G++ A+GSA +IG+T ++A+++ E+ P+
Sbjct: 11 FIQGGIDQNLRSDGRKRDAYRPISIETGVIPQANGSARIRIGATEVIASVKAELGRPNAL 70
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTIL 498
PD+G +AI P+ P E + +S L +L
Sbjct: 71 QPDKGKVAIFVDCSPVAEPMFEGRGGEELSAELSVALQRCLL 112
[215][TOP]
>UniRef100_B6TKK3 Exosome complex exonuclease RRP42 n=1 Tax=Zea mays
RepID=B6TKK3_MAIZE
Length = 287
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/98 (31%), Positives = 53/98 (54%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F +++ +R DGR+ + R V G++ A+GSA ++G+T ++A+++ E+ PS
Sbjct: 11 FIRGGIAQDVRTDGRRRLQFRSLSVQTGVIPQANGSARVRLGATEIIASVKAELGKPSIL 70
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLS 486
PD+G +AI CSPT P + +S LS
Sbjct: 71 HPDKGKVAIFVD----CSPTAEPLFEGRGSEELSAELS 104
[216][TOP]
>UniRef100_B4G0W6 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4G0W6_MAIZE
Length = 287
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/98 (31%), Positives = 53/98 (54%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F +++ +R DGR+ + R V G++ A+GSA ++G+T ++A+++ E+ PS
Sbjct: 11 FIRGGIAQDVRTDGRRRLQFRSLSVQTGVIPQANGSARVRLGATEIIASVKAELGKPSIL 70
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLS 486
PD+G +AI CSPT P + +S LS
Sbjct: 71 HPDKGKVAIFVD----CSPTAEPLFEGRGSEELSAELS 104
[217][TOP]
>UniRef100_A8IE44 3'-5' exoribonuclease PH component of the exosome n=1
Tax=Chlamydomonas reinhardtii RepID=A8IE44_CHLRE
Length = 296
Score = 54.7 bits (130), Expect = 4e-06
Identities = 34/127 (26%), Positives = 56/127 (44%)
Frame = +1
Query: 148 TEMEVDAFRRIFPLRFFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTT 327
++ + D+F F + L+E +R DGR+ R L D S GST
Sbjct: 2 SQRDADSFISKNEREFILKALAEDVRLDGRRPNDMRKPKFQFSL---DDRSCTVAQGSTR 58
Query: 328 MLAAIRMEVMTPSTDSPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSG 507
++A + + P D P EG + P+ SP PG+P E A +++ + + SG
Sbjct: 59 VMAVVSAALEAPYPDRPSEGPLRFNVEFSPMASPAFEPGKPGEDAIQVARLIERGLRQSG 118
Query: 508 MIDLKEL 528
+D + L
Sbjct: 119 AVDQEAL 125
[218][TOP]
>UniRef100_Q4JB27 Probable exosome complex exonuclease 1 n=1 Tax=Sulfolobus
acidocaldarius RepID=ECX1_SULAC
Length = 243
Score = 54.7 bits (130), Expect = 4e-06
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAI--RMEVMTPSTDSPD 381
L LR DGR+L + R + LG++ ADGSA+ ++G+T ++AA+ E+ PD
Sbjct: 11 LENGLRTDGRKLDELRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKEMHPRHLALPD 70
Query: 382 EGCIAIEFHMPPICSPTVRPGRPA----EAAPVISKRLSDTIL 498
+ + + +HM P + + P+ E + VI + L TIL
Sbjct: 71 KASLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESTIL 113
[219][TOP]
>UniRef100_A7P612 Chromosome chr4 scaffold_6, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P612_VITVI
Length = 287
Score = 54.3 bits (129), Expect = 5e-06
Identities = 31/101 (30%), Positives = 51/101 (50%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F + +++ LR DGR+ R V G++ A+GSA ++G T ++A+++ E+ PS
Sbjct: 11 FIQGGIAQDLRTDGRRRLTYRPFNVETGVIPQANGSARVRLGGTDVIASVKAELGKPSPS 70
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTI 495
PD+G + I CSPT P +S LS +
Sbjct: 71 QPDKGKVNIYVD----CSPTAAPMFEGRGGEELSTELSGAL 107
[220][TOP]
>UniRef100_Q97BZ4 Probable exosome complex exonuclease 2 n=1 Tax=Thermoplasma
volcanium RepID=ECX2_THEVO
Length = 260
Score = 54.3 bits (129), Expect = 5e-06
Identities = 31/104 (29%), Positives = 52/104 (50%)
Frame = +1
Query: 223 RPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEGCIAIE 402
R DGR + R+ + V A+GSA +G T ++A +++E P D+PD+G +
Sbjct: 26 RIDGRLPDEFREITIIENYVPRANGSAYVALGKTRVVAGVKIEAGEPFPDTPDQGVLTTN 85
Query: 403 FHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCL 534
+ PI P+ G P + A +S+ + I S MI +L +
Sbjct: 86 VELLPIAFPSFEAGPPNDLAIEVSRVVDRGIRESKMISPDKLVI 129
[221][TOP]
>UniRef100_A3MUP1 Probable exosome complex exonuclease 1 n=1 Tax=Pyrobaculum
calidifontis JCM 11548 RepID=ECX1_PYRCJ
Length = 246
Score = 54.3 bits (129), Expect = 5e-06
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAI--RMEVMTPSTDSPD 381
L LR DGR + R+ + +G VS ADGSA+ G+TT +AA+ E+ PD
Sbjct: 9 LQNGLRADGRAPDQMREVQIQVGTVSNADGSAVVSYGATTAVAAVYGPREMHPRHLSLPD 68
Query: 382 EGCIAIEFHMPPICSPTVRPG-RPAEAAPVISKRLSDTILSSGMID 516
G + + +HM P + R P+ ISK L + + + M++
Sbjct: 69 RGVMRVRYHMAPFSTKDERKSPTPSRREIEISKVLREALEPAVMLE 114
[222][TOP]
>UniRef100_Q1HPI0 Exosc7 protein n=1 Tax=Bombyx mori RepID=Q1HPI0_BOMMO
Length = 277
Score = 53.9 bits (128), Expect = 7e-06
Identities = 41/117 (35%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F + E R DGR R + +VS A GSA ++ +T +L I+ E+ TP D
Sbjct: 13 FIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPD 72
Query: 373 SPDEGCIAIEFHMPPICSPTVR-PGRPAE-AAPVISKRLSDTILSSGMIDLKELCLV 537
PD G IEF + + T GR E A IS + SS DLK+LC+V
Sbjct: 73 KPDMG--KIEFLVDGSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIV 127
[223][TOP]
>UniRef100_UPI00005BD481 Exosome complex exonuclease RRP42 (EC 3.1.13.-) (Ribosomal RNA-
processing protein 42) (Exosome component 7) (p8). n=1
Tax=Bos taurus RepID=UPI00005BD481
Length = 291
Score = 53.5 bits (127), Expect = 9e-06
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
+ E LR DGR R V +VS GSA K+G T +L ++ E+ TP + P+EG
Sbjct: 18 VQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILVGVKAEMGTPKLEKPNEG 77
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTIL----SSGMIDLKELCL 534
+EF + CS + P + +++T+ + IDLK LC+
Sbjct: 78 --YLEFFVD--CSASATPEFEGRGGDDLGTEIANTLYRIFNNKSSIDLKSLCI 126
[224][TOP]
>UniRef100_C5Z2L4 Putative uncharacterized protein Sb10g031070 n=1 Tax=Sorghum
bicolor RepID=C5Z2L4_SORBI
Length = 286
Score = 53.5 bits (127), Expect = 9e-06
Identities = 30/93 (32%), Positives = 52/93 (55%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTDSPDEG 387
+++ LR DGR+ + R V G++ A+GSA ++G+T ++A+++ E+ PS PD+G
Sbjct: 16 IAQDLRTDGRRRLQFRALSVQTGVIPQANGSARVRLGATEIIASVKAELGKPSILHPDKG 75
Query: 388 CIAIEFHMPPICSPTVRPGRPAEAAPVISKRLS 486
++I CSPT P + +S LS
Sbjct: 76 KVSIFVD----CSPTAEPMFEGRGSEELSAELS 104
[225][TOP]
>UniRef100_C5YTI5 Putative uncharacterized protein Sb08g006250 n=1 Tax=Sorghum
bicolor RepID=C5YTI5_SORBI
Length = 287
Score = 53.5 bits (127), Expect = 9e-06
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F +++ +R DGR+ + R V G++ A+GSA ++G T ++A+++ E+ PS
Sbjct: 12 FIHGGIAQDIRTDGRRRLQFRALSVQTGVIPQANGSARVRLGVTEIIASVKAELGKPSIL 71
Query: 373 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTIL---------SSGMIDLKE 525
PD+G ++I CSPT P + +S LS + S IDL
Sbjct: 72 HPDKGKVSIFVD----CSPTAEPMFEGRGSEELSAELSAALQRCLLGGKSGSGAAIDLSS 127
Query: 526 LCLV 537
L +V
Sbjct: 128 LIVV 131
[226][TOP]
>UniRef100_B7QNK0 Exosomal 3'-5' exoribonuclease complex, subunit Rrp42, putative n=1
Tax=Ixodes scapularis RepID=B7QNK0_IXOSC
Length = 290
Score = 53.5 bits (127), Expect = 9e-06
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Frame = +1
Query: 193 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 372
F + E+LR DGR + RD + G+VS GSA ++ +T +L I+ ++ TP
Sbjct: 13 FIIHGIQENLRCDGRSCLEYRDIELETGVVSNCSGSAHVRLANTDILVGIKAQLETPDPG 72
Query: 373 SPDEGCIAIEFHMPPICSPTVRP---GRPAE-AAPVISKRLSDTILSSGMIDLKELCLV 537
S D+G IEF + C+ P GR E A IS L+ S +DL+ L +V
Sbjct: 73 STDQG--RIEFFVD--CTANADPEFEGRGGEDIAAEISSALAQAYRSPKCLDLRSLAVV 127
[227][TOP]
>UniRef100_B1Y978 Probable exosome complex exonuclease 1 n=1 Tax=Thermoproteus
neutrophilus V24Sta RepID=ECX1_THENV
Length = 246
Score = 53.5 bits (127), Expect = 9e-06
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAI--RMEVMTPSTDSPD 381
L +R DGR + R+ +++G++S ADGSA+ G+TT +AA+ E+ PD
Sbjct: 9 LQGGVRADGRAPDQMREVQISVGVISNADGSAMVSYGATTAVAAVYGPREMHPRHLSLPD 68
Query: 382 EGCIAIEFHMPPICSPTVRPG-RPAEAAPVISKRLSDTILSSGMID 516
G + + +HM P + R P+ ISK L + + + M++
Sbjct: 69 RGVMRVRYHMAPFSTKDERKSPTPSRREIEISKVLREALEPAVMLE 114
[228][TOP]
>UniRef100_A4WM67 Probable exosome complex exonuclease 1 n=1 Tax=Pyrobaculum
arsenaticum DSM 13514 RepID=ECX1_PYRAR
Length = 246
Score = 53.5 bits (127), Expect = 9e-06
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Frame = +1
Query: 208 LSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAI--RMEVMTPSTDSPD 381
L +R DGR + R+ +++G+VS ADGSA+ G+TT +AA+ E+ PD
Sbjct: 9 LQNGVRADGRLPDQMREVKISVGVVSNADGSAMVSYGATTAVAAVYGPREMHPRHLSLPD 68
Query: 382 EGCIAIEFHMPPICSPTVRPG-----RPAEAAPVISKRLSDTIL 498
G + + +HM P + R R E + V+ + L +L
Sbjct: 69 RGVMRVRYHMAPFSTKDERKSPTPSRREIEISKVLREALEPAVL 112