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[1][TOP] >UniRef100_O24600 DNA-directed RNA polymerase 3, chloroplastic n=2 Tax=Arabidopsis thaliana RepID=RPOT3_ARATH Length = 993 Score = 104 bits (260), Expect = 5e-21 Identities = 50/54 (92%), Positives = 51/54 (94%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 RILREKFVELY ILEDLLQSFQESYPNLVFPPVPKRGDFDLKE+LKSQYFFN Sbjct: 940 RILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGDFDLKEVLKSQYFFN 993 [2][TOP] >UniRef100_P69243 DNA-directed RNA polymerase 3A, chloroplastic n=2 Tax=Nicotiana RepID=RPO3A_TOBAC Length = 977 Score = 89.7 bits (221), Expect = 2e-16 Identities = 42/54 (77%), Positives = 47/54 (87%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 RILREKFVELY+ ILEDLL+SFQ SYP L FPP+PKRGDFDL E+L+S YFFN Sbjct: 924 RILREKFVELYSMPILEDLLESFQNSYPALTFPPLPKRGDFDLVEVLESPYFFN 977 [3][TOP] >UniRef100_Q8L6J1 DNA-directed RNA polymerase 3B, chloroplastic n=1 Tax=Nicotiana tabacum RepID=RPO3B_TOBAC Length = 977 Score = 88.2 bits (217), Expect = 4e-16 Identities = 40/54 (74%), Positives = 49/54 (90%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 RILREKFVELY+ ILEDLL++FQ+SYP L FPP+PKRGDF+L+E+L+S YFFN Sbjct: 924 RILREKFVELYSLPILEDLLENFQKSYPALTFPPLPKRGDFNLREVLESPYFFN 977 [4][TOP] >UniRef100_P93661 DNA-directed RNA polymerase n=1 Tax=Chenopodium album RepID=P93661_CHEAL Length = 988 Score = 86.7 bits (213), Expect = 1e-15 Identities = 39/54 (72%), Positives = 48/54 (88%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILREKFVELY ILE+LL+SFQES+P L FPP+P+RGDFDL+E+L+S YFFN Sbjct: 935 QILREKFVELYEQPILENLLESFQESFPTLQFPPLPERGDFDLREVLESPYFFN 988 [5][TOP] >UniRef100_B9HWT3 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9HWT3_POPTR Length = 852 Score = 86.7 bits (213), Expect = 1e-15 Identities = 39/54 (72%), Positives = 48/54 (88%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 RILREKFVELY ILE+LL+SFQ S+PNL FPP+P+RGDFDL+++L+S YFFN Sbjct: 799 RILREKFVELYETPILENLLESFQSSFPNLKFPPLPERGDFDLRDVLQSTYFFN 852 [6][TOP] >UniRef100_B9T5S6 DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9T5S6_RICCO Length = 589 Score = 85.9 bits (211), Expect = 2e-15 Identities = 38/54 (70%), Positives = 48/54 (88%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 RILREKFVELY +LE+LL+SFQ+S+P L FPP+P+RGDFDL+++LKS YFFN Sbjct: 536 RILREKFVELYETPVLENLLESFQQSFPTLSFPPLPERGDFDLQDVLKSPYFFN 589 [7][TOP] >UniRef100_Q8L6J3 DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial n=1 Tax=Nicotiana tabacum RepID=RPO2B_TOBAC Length = 1021 Score = 85.9 bits (211), Expect = 2e-15 Identities = 39/54 (72%), Positives = 47/54 (87%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 RILREKFVELY ILE LL+SFQ SYP L+FPP+P+RGDFDL+++L+S YFFN Sbjct: 968 RILREKFVELYETPILEKLLESFQTSYPTLLFPPLPERGDFDLRDVLESPYFFN 1021 [8][TOP] >UniRef100_Q93Y94 DNA-directed RNA polymerase 1, mitochondrial n=1 Tax=Nicotiana sylvestris RepID=RPOT1_NICSY Length = 1002 Score = 85.5 bits (210), Expect = 3e-15 Identities = 38/54 (70%), Positives = 49/54 (90%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILREKFVELY ILE+LL+SFQ+S+P+L FPP+P+RGDFDL+E+L+S YFFN Sbjct: 949 KILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002 [9][TOP] >UniRef100_Q8L6J5 DNA-directed RNA polymerase 1B, mitochondrial n=1 Tax=Nicotiana tabacum RepID=RPO1B_TOBAC Length = 1002 Score = 85.5 bits (210), Expect = 3e-15 Identities = 38/54 (70%), Positives = 49/54 (90%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILREKFVELY ILE+LL+SFQ+S+P+L FPP+P+RGDFDL+E+L+S YFFN Sbjct: 949 KILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002 [10][TOP] >UniRef100_Q8L6J4 DNA-directed RNA polymerase 1A (Fragment) n=1 Tax=Nicotiana tabacum RepID=RPO1A_TOBAC Length = 155 Score = 85.5 bits (210), Expect = 3e-15 Identities = 38/54 (70%), Positives = 49/54 (90%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILREKFVELY ILE+LL+SFQ+S+P+L FPP+P+RGDFDL+E+L+S YFFN Sbjct: 102 KILREKFVELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 155 [11][TOP] >UniRef100_Q8VWF8 DNA-directed RNA polymerase 2, chloroplastic/mitochondrial n=2 Tax=Nicotiana sylvestris RepID=RPOT2_NICSY Length = 1020 Score = 85.1 bits (209), Expect = 4e-15 Identities = 38/54 (70%), Positives = 47/54 (87%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 RILREKFVELY ILE LL+SFQ SYP L+FPP+P+RGDFD++++L+S YFFN Sbjct: 967 RILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 1020 [12][TOP] >UniRef100_Q8L6J2 DNA-directed RNA polymerase 2A (Fragment) n=1 Tax=Nicotiana tabacum RepID=RPO2A_TOBAC Length = 332 Score = 85.1 bits (209), Expect = 4e-15 Identities = 38/54 (70%), Positives = 47/54 (87%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 RILREKFVELY ILE LL+SFQ SYP L+FPP+P+RGDFD++++L+S YFFN Sbjct: 279 RILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 332 [13][TOP] >UniRef100_B9HIV5 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9HIV5_POPTR Length = 877 Score = 84.7 bits (208), Expect = 5e-15 Identities = 39/54 (72%), Positives = 47/54 (87%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 RILREKFVELY ILE+LL+SFQ S+PNL FPP+P+RG FDLK++L+S YFFN Sbjct: 824 RILREKFVELYEAPILENLLESFQSSFPNLKFPPLPERGVFDLKDVLRSTYFFN 877 [14][TOP] >UniRef100_B4YPU8 DNA-directed RNA polymerase n=1 Tax=Brassica oleracea var. alboglabra RepID=B4YPU8_BRAOA Length = 951 Score = 84.7 bits (208), Expect = 5e-15 Identities = 37/53 (69%), Positives = 47/53 (88%) Frame = -1 Query: 589 ILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 ILREKFVELY ILE+LL+SFQ+S+P L FPP+P+RGDFDL+E+++S YFFN Sbjct: 899 ILREKFVELYDKPILENLLESFQKSFPGLTFPPLPERGDFDLREVIRSPYFFN 951 [15][TOP] >UniRef100_A5AW22 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5AW22_VITVI Length = 168 Score = 84.3 bits (207), Expect = 6e-15 Identities = 38/54 (70%), Positives = 48/54 (88%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 RILREKFV+LY ILE+LL+SFQ+S+P L FPP+P+RGDFDL+E+L+S YFFN Sbjct: 115 RILREKFVQLYETPILENLLESFQQSFPALEFPPLPERGDFDLREVLESPYFFN 168 [16][TOP] >UniRef100_Q9XF15 DNA-directed RNA polymerase n=1 Tax=Zea mays RepID=Q9XF15_MAIZE Length = 975 Score = 84.0 bits (206), Expect = 8e-15 Identities = 37/54 (68%), Positives = 48/54 (88%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILREKFVELY ILE+LL+SF++S+P L FPP+P+RGDFD+KE+L+S YFFN Sbjct: 922 KILREKFVELYDTPILENLLESFEKSFPKLKFPPLPERGDFDMKEVLESTYFFN 975 [17][TOP] >UniRef100_C5X2G2 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor RepID=C5X2G2_SORBI Length = 976 Score = 84.0 bits (206), Expect = 8e-15 Identities = 37/54 (68%), Positives = 48/54 (88%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILREKFVELY ILE+LL+SF++S+P L FPP+P+RGDFD+KE+L+S YFFN Sbjct: 923 KILREKFVELYDTPILENLLESFEKSFPKLKFPPLPERGDFDMKEVLESPYFFN 976 [18][TOP] >UniRef100_B4FGZ4 DNA-directed RNA polymerase n=1 Tax=Zea mays RepID=B4FGZ4_MAIZE Length = 323 Score = 84.0 bits (206), Expect = 8e-15 Identities = 37/54 (68%), Positives = 48/54 (88%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILREKFVELY ILE+LL+SF++S+P L FPP+P+RGDFD+KE+L+S YFFN Sbjct: 270 KILREKFVELYDTPILENLLESFEKSFPKLKFPPLPERGDFDMKEVLESTYFFN 323 [19][TOP] >UniRef100_A7PNA5 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7PNA5_VITVI Length = 978 Score = 83.6 bits (205), Expect = 1e-14 Identities = 38/54 (70%), Positives = 47/54 (87%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 RILREKFVELY ILE+LL+ FQ+S+P L FPP+P+RGDFDL+E+L+S YFFN Sbjct: 925 RILREKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGDFDLREVLESPYFFN 978 [20][TOP] >UniRef100_A7PAG7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7PAG7_VITVI Length = 1035 Score = 83.6 bits (205), Expect = 1e-14 Identities = 37/54 (68%), Positives = 48/54 (88%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 R+LREKFV+LY ILE+LL+SFQ+S+P L FPP+P+RGDFDL+E+L+S YFFN Sbjct: 982 RLLREKFVQLYETPILENLLESFQQSFPALEFPPLPERGDFDLREVLESPYFFN 1035 [21][TOP] >UniRef100_A5CAT5 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5CAT5_VITVI Length = 305 Score = 83.6 bits (205), Expect = 1e-14 Identities = 38/54 (70%), Positives = 47/54 (87%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 RILREKFVELY+ ILE+LL+SFQ S+P L FPP+P RG+FDL+E+L+S YFFN Sbjct: 252 RILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 305 [22][TOP] >UniRef100_B9N1V3 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9N1V3_POPTR Length = 543 Score = 82.4 bits (202), Expect = 2e-14 Identities = 37/54 (68%), Positives = 47/54 (87%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 RILREKFVELY ILE+LL+SF++S+P L FPP+P RGDF+L+E+L+S YFFN Sbjct: 490 RILREKFVELYETPILENLLESFEKSFPTLSFPPLPDRGDFELREVLESPYFFN 543 [23][TOP] >UniRef100_B9N1V2 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9N1V2_POPTR Length = 528 Score = 82.4 bits (202), Expect = 2e-14 Identities = 37/54 (68%), Positives = 47/54 (87%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 RILREKFVELY ILE+LL+SF++S+P L FPP+P RGDF+L+E+L+S YFFN Sbjct: 475 RILREKFVELYETPILENLLESFEKSFPTLSFPPLPDRGDFELREVLESPYFFN 528 [24][TOP] >UniRef100_P92969 DNA-directed RNA polymerase 1, mitochondrial n=1 Tax=Arabidopsis thaliana RepID=RPOT1_ARATH Length = 976 Score = 82.4 bits (202), Expect = 2e-14 Identities = 36/53 (67%), Positives = 48/53 (90%) Frame = -1 Query: 589 ILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 ILREKFVELY ILE+LL+SFQ+S+P++ FPP+P+RGDFDL+++L+S YFFN Sbjct: 924 ILREKFVELYEKPILENLLESFQKSFPDISFPPLPERGDFDLRKVLESTYFFN 976 [25][TOP] >UniRef100_B9IMA6 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9IMA6_POPTR Length = 882 Score = 82.0 bits (201), Expect = 3e-14 Identities = 37/54 (68%), Positives = 46/54 (85%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 RILREKFVELY ILE+LL+ FQ SYP L FPP+P+RG+FDL+++L+S YFFN Sbjct: 829 RILREKFVELYNMPILENLLEDFQTSYPTLQFPPLPERGNFDLQKVLRSPYFFN 882 [26][TOP] >UniRef100_A7PFM9 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7PFM9_VITVI Length = 979 Score = 82.0 bits (201), Expect = 3e-14 Identities = 37/54 (68%), Positives = 47/54 (87%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILREKFVELY+ ILE+LL+SFQ S+P L FPP+P RG+FDL+E+L+S YFFN Sbjct: 926 QILREKFVELYSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLESPYFFN 979 [27][TOP] >UniRef100_Q8SBD4 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens RepID=Q8SBD4_PHYPA Length = 1087 Score = 81.3 bits (199), Expect = 5e-14 Identities = 36/53 (67%), Positives = 45/53 (84%) Frame = -1 Query: 589 ILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +LREKFVELY+ +LE+LL+SFQE +P LVFP VP RGD DLKE+L++ YFFN Sbjct: 1035 LLREKFVELYSQPVLENLLKSFQERFPTLVFPEVPARGDLDLKEVLRAPYFFN 1087 [28][TOP] >UniRef100_Q8L6F9 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens RepID=Q8L6F9_PHYPA Length = 1087 Score = 81.3 bits (199), Expect = 5e-14 Identities = 36/53 (67%), Positives = 45/53 (84%) Frame = -1 Query: 589 ILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +LREKFVELY+ +LE+LL+SFQE +P LVFP VP RGD DLKE+L++ YFFN Sbjct: 1035 LLREKFVELYSQPVLENLLKSFQERFPTLVFPEVPARGDLDLKEVLRAPYFFN 1087 [29][TOP] >UniRef100_Q52GZ4 DNA-directed RNA polymerase n=1 Tax=Spinacia oleracea RepID=Q52GZ4_SPIOL Length = 1036 Score = 81.3 bits (199), Expect = 5e-14 Identities = 36/53 (67%), Positives = 45/53 (84%) Frame = -1 Query: 589 ILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 ILREKFVELY ILE+LL++FQ+SYP L FPP+P RGDF+L+++L S YFFN Sbjct: 984 ILREKFVELYDQPILENLLETFQQSYPTLSFPPLPDRGDFELRDVLDSPYFFN 1036 [30][TOP] >UniRef100_A9TL52 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TL52_PHYPA Length = 1088 Score = 81.3 bits (199), Expect = 5e-14 Identities = 36/53 (67%), Positives = 45/53 (84%) Frame = -1 Query: 589 ILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +LREKFVELY+ +LE+LL+SFQE +P LVFP VP RGD DLKE+L++ YFFN Sbjct: 1036 LLREKFVELYSQPVLENLLKSFQERFPTLVFPEVPARGDLDLKEVLRAPYFFN 1088 [31][TOP] >UniRef100_B9RLF2 DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RLF2_RICCO Length = 997 Score = 80.5 bits (197), Expect = 9e-14 Identities = 36/54 (66%), Positives = 45/54 (83%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 RILRE FVELY ILE+LL+ FQ+S+P L FPP+P RGDFDL+++L+S YFFN Sbjct: 944 RILRENFVELYEAPILENLLEGFQKSFPKLKFPPLPDRGDFDLRDVLESPYFFN 997 [32][TOP] >UniRef100_B9HB51 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9HB51_POPTR Length = 982 Score = 80.5 bits (197), Expect = 9e-14 Identities = 37/54 (68%), Positives = 45/54 (83%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 RILREKFVELY ILE+LL+ FQ SYP L FP +P+RG+FDL+E+L+S YFFN Sbjct: 929 RILREKFVELYNMPILENLLEDFQTSYPTLKFPSLPERGNFDLQEVLRSPYFFN 982 [33][TOP] >UniRef100_Q9MQV1 DNA-directed RNA polymerase n=1 Tax=Triticum aestivum RepID=Q9MQV1_WHEAT Length = 1005 Score = 80.1 bits (196), Expect = 1e-13 Identities = 35/54 (64%), Positives = 47/54 (87%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILREKFVELY ILE+LL+SF+ S+P L FPP+P+RG+FD+K++L+S YFFN Sbjct: 952 KILREKFVELYDAPILENLLESFETSFPKLKFPPLPERGNFDMKDVLQSTYFFN 1005 [34][TOP] >UniRef100_Q84LK6 DNA-directed RNA polymerase n=2 Tax=Oryza sativa Japonica Group RepID=Q84LK6_ORYSJ Length = 1017 Score = 80.1 bits (196), Expect = 1e-13 Identities = 36/54 (66%), Positives = 46/54 (85%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILREKFVELY ILE+LL+SF++S+P L FPP+P+RGDFDL ++L S YFFN Sbjct: 964 KILREKFVELYDTPILENLLESFEKSFPELKFPPLPERGDFDLTDVLGSPYFFN 1017 [35][TOP] >UniRef100_Q70BU3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hordeum vulgare RepID=Q70BU3_HORVU Length = 862 Score = 80.1 bits (196), Expect = 1e-13 Identities = 35/54 (64%), Positives = 47/54 (87%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILREKFVELY ILE+LL+SF+ S+P L FPP+P+RG+FD+K++L+S YFFN Sbjct: 809 KILREKFVELYDAPILENLLESFETSFPKLKFPPLPERGNFDMKDVLQSTYFFN 862 [36][TOP] >UniRef100_A2YYV2 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group RepID=A2YYV2_ORYSI Length = 845 Score = 80.1 bits (196), Expect = 1e-13 Identities = 36/54 (66%), Positives = 46/54 (85%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILREKFVELY ILE+LL+SF++S+P L FPP+P+RGDFDL ++L S YFFN Sbjct: 792 KILREKFVELYDTPILENLLESFEKSFPELKFPPLPERGDFDLTDVLGSPYFFN 845 [37][TOP] >UniRef100_Q9LFV6 DNA-directed RNA polymerase 2, chloroplastic/mitochondrial n=1 Tax=Arabidopsis thaliana RepID=RPOT2_ARATH Length = 1011 Score = 80.1 bits (196), Expect = 1e-13 Identities = 36/53 (67%), Positives = 46/53 (86%) Frame = -1 Query: 589 ILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 ILREKFVELY+ ILE+LL+SF++S+P+L FPP+P+RGD DLK +L S YFFN Sbjct: 959 ILREKFVELYSQPILENLLESFEQSFPHLDFPPLPERGDLDLKVVLDSPYFFN 1011 [38][TOP] >UniRef100_Q52GZ3 DNA-directed RNA polymerase n=1 Tax=Spinacia oleracea RepID=Q52GZ3_SPIOL Length = 989 Score = 79.0 bits (193), Expect = 3e-13 Identities = 36/54 (66%), Positives = 45/54 (83%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILR KFVELY ILE+LL+SFQ +YP FPP+P+RGDFDL+E+L+S YFFN Sbjct: 936 QILRVKFVELYNMPILENLLESFQTAYPASTFPPLPERGDFDLEEVLESPYFFN 989 [39][TOP] >UniRef100_B9N7P2 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9N7P2_POPTR Length = 847 Score = 78.6 bits (192), Expect = 4e-13 Identities = 35/54 (64%), Positives = 47/54 (87%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 RILREKFVELY IL++LL+SFQ+S+P L FPP+P+ GDF+L+++L+S YFFN Sbjct: 794 RILREKFVELYETPILKNLLESFQKSFPTLSFPPLPEWGDFELRQVLESPYFFN 847 [40][TOP] >UniRef100_B2RFX8 DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=B2RFX8_9TRAC Length = 1002 Score = 76.6 bits (187), Expect = 1e-12 Identities = 36/53 (67%), Positives = 42/53 (79%) Frame = -1 Query: 589 ILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 ILREKFVELY ILE+LL+SFQ+ +P L FP +P RGD DLKE+L S YFFN Sbjct: 950 ILREKFVELYEQPILENLLESFQKRWPKLKFPDLPVRGDLDLKEVLSSPYFFN 1002 [41][TOP] >UniRef100_Q67UP6 DNA-directed RNA polymerase n=2 Tax=Oryza sativa Japonica Group RepID=Q67UP6_ORYSJ Length = 806 Score = 76.3 bits (186), Expect = 2e-12 Identities = 34/54 (62%), Positives = 44/54 (81%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILRE+FVELY+ ILE+LL+ FQ S+P L FPP P +GDFD++E+L S YFFN Sbjct: 753 QILREQFVELYSMPILENLLKEFQTSFPTLEFPPCPSQGDFDVREVLASTYFFN 806 [42][TOP] >UniRef100_Q84LK5 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=Q84LK5_ORYSJ Length = 953 Score = 76.3 bits (186), Expect = 2e-12 Identities = 34/54 (62%), Positives = 44/54 (81%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILRE+FVELY+ ILE+LL+ FQ S+P L FPP P +GDFD++E+L S YFFN Sbjct: 900 QILREQFVELYSMPILENLLKEFQTSFPTLEFPPCPSQGDFDVREVLASTYFFN 953 [43][TOP] >UniRef100_B9FQ93 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9FQ93_ORYSJ Length = 946 Score = 76.3 bits (186), Expect = 2e-12 Identities = 34/54 (62%), Positives = 44/54 (81%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILRE+FVELY+ ILE+LL+ FQ S+P L FPP P +GDFD++E+L S YFFN Sbjct: 893 QILREQFVELYSMPILENLLKEFQTSFPTLEFPPCPSQGDFDVREVLASTYFFN 946 [44][TOP] >UniRef100_A2YFP7 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group RepID=A2YFP7_ORYSI Length = 950 Score = 76.3 bits (186), Expect = 2e-12 Identities = 34/54 (62%), Positives = 44/54 (81%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILRE+FVELY+ ILE+LL+ FQ S+P L FPP P +GDFD++E+L S YFFN Sbjct: 897 QILREQFVELYSMPILENLLKEFQTSFPTLEFPPCPSQGDFDVREVLASTYFFN 950 [45][TOP] >UniRef100_Q8SBD3 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens RepID=Q8SBD3_PHYPA Length = 1065 Score = 74.7 bits (182), Expect = 5e-12 Identities = 35/53 (66%), Positives = 41/53 (77%) Frame = -1 Query: 589 ILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 ILR+ FV+LY ILE+LL FQ +P+LVFP VP RGD DLKE+LKS YFFN Sbjct: 1013 ILRKNFVKLYKQPILENLLLDFQTQFPDLVFPEVPARGDLDLKEVLKSPYFFN 1065 [46][TOP] >UniRef100_Q8L6F8 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens RepID=Q8L6F8_PHYPA Length = 1065 Score = 74.7 bits (182), Expect = 5e-12 Identities = 35/53 (66%), Positives = 41/53 (77%) Frame = -1 Query: 589 ILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 ILR+ FV+LY ILE+LL FQ +P+LVFP VP RGD DLKE+LKS YFFN Sbjct: 1013 ILRKNFVKLYKQPILENLLLDFQTQFPDLVFPEVPARGDLDLKEVLKSPYFFN 1065 [47][TOP] >UniRef100_A9TJW1 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJW1_PHYPA Length = 1065 Score = 74.7 bits (182), Expect = 5e-12 Identities = 35/53 (66%), Positives = 41/53 (77%) Frame = -1 Query: 589 ILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 ILR+ FV+LY ILE+LL FQ +P+LVFP VP RGD DLKE+LKS YFFN Sbjct: 1013 ILRKNFVKLYKQPILENLLLDFQTQFPDLVFPEVPARGDLDLKEVLKSPYFFN 1065 [48][TOP] >UniRef100_O24216 Putative T3/T7-like RNA polymerase (Fragment) n=1 Tax=Oryza sativa RepID=O24216_ORYSA Length = 87 Score = 73.6 bits (179), Expect = 1e-11 Identities = 33/54 (61%), Positives = 43/54 (79%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILR +FVELY+ ILE+LL+ FQ S+P L FPP P +GDFD++E+L S YFFN Sbjct: 34 QILRGQFVELYSMPILENLLKEFQTSFPTLEFPPCPSQGDFDVREVLASTYFFN 87 [49][TOP] >UniRef100_A9TJ21 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJ21_PHYPA Length = 861 Score = 73.6 bits (179), Expect = 1e-11 Identities = 32/54 (59%), Positives = 43/54 (79%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 ++ REKFVELY++ ILE+LL FQ Y +L FPPVP+RG D++E+LK+ YFFN Sbjct: 808 KLTREKFVELYSYPILENLLLGFQRRYADLTFPPVPERGVLDIREVLKAPYFFN 861 [50][TOP] >UniRef100_Q9SYW4 DNA-directed RNA polymerase n=1 Tax=Zea mays RepID=Q9SYW4_MAIZE Length = 952 Score = 73.2 bits (178), Expect = 1e-11 Identities = 32/54 (59%), Positives = 44/54 (81%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILR++FVELY+ ILE+LL+ FQ S+P L FPP P +G+FD++E+L S YFFN Sbjct: 899 QILRQQFVELYSMPILENLLEEFQTSFPTLEFPPCPPQGNFDVREVLTSTYFFN 952 [51][TOP] >UniRef100_O82725 DNA-directed RNA polymerase n=1 Tax=Zea mays RepID=O82725_MAIZE Length = 952 Score = 73.2 bits (178), Expect = 1e-11 Identities = 32/54 (59%), Positives = 44/54 (81%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILR++FVELY+ ILE+LL+ FQ S+P L FPP P +G+FD++E+L S YFFN Sbjct: 899 QILRQQFVELYSMPILENLLEEFQTSFPTLEFPPCPPQGNFDVREVLTSTYFFN 952 [52][TOP] >UniRef100_Q1KUU5 Putative uncharacterized protein n=1 Tax=Cleome spinosa RepID=Q1KUU5_9ROSI Length = 1021 Score = 71.6 bits (174), Expect = 4e-11 Identities = 32/45 (71%), Positives = 40/45 (88%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKE 458 R LREKFVELY ILEDLL+SF++S+P+L FPP+P+RGDFDL+E Sbjct: 942 RTLREKFVELYDKPILEDLLESFEKSFPHLSFPPLPERGDFDLRE 986 [53][TOP] >UniRef100_Q70XR1 DNA-directed RNA polymerase n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q70XR1_HORVD Length = 948 Score = 70.9 bits (172), Expect = 7e-11 Identities = 31/54 (57%), Positives = 43/54 (79%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILRE+FVELY+ ILE+LL+ FQ +P + FPP P +G+FD++E+L S YFFN Sbjct: 895 QILREQFVELYSMPILENLLEEFQTLFPTVEFPPCPAQGNFDVREVLTSTYFFN 948 [54][TOP] >UniRef100_Q70XR0 DNA-directed RNA polymerase n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q70XR0_HORVD Length = 948 Score = 70.9 bits (172), Expect = 7e-11 Identities = 31/54 (57%), Positives = 43/54 (79%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILRE+FVELY+ ILE+LL+ FQ +P + FPP P +G+FD++E+L S YFFN Sbjct: 895 QILREQFVELYSMPILENLLEEFQTLFPTVEFPPCPAQGNFDVREVLTSTYFFN 948 [55][TOP] >UniRef100_Q41524 DNA-directed RNA polymerase n=1 Tax=Triticum aestivum RepID=Q41524_WHEAT Length = 949 Score = 70.9 bits (172), Expect = 7e-11 Identities = 31/54 (57%), Positives = 43/54 (79%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILRE+FVELY+ ILE+LL+ FQ +P + FPP P +G+FD++E+L S YFFN Sbjct: 896 QILREQFVELYSMPILENLLEEFQTLFPTVEFPPCPAQGNFDVREVLTSTYFFN 949 [56][TOP] >UniRef100_O23999 Putative T7/T3-like RNA polymerase (Fragment) n=1 Tax=Hordeum vulgare RepID=O23999_HORVU Length = 129 Score = 70.9 bits (172), Expect = 7e-11 Identities = 31/54 (57%), Positives = 43/54 (79%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILRE+FVELY+ ILE+LL+ FQ +P + FPP P +G+FD++E+L S YFFN Sbjct: 76 QILREQFVELYSMPILENLLEEFQTLFPTVEFPPCPAQGNFDVREVLTSTYFFN 129 [57][TOP] >UniRef100_C5Z749 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor RepID=C5Z749_SORBI Length = 960 Score = 70.5 bits (171), Expect = 1e-10 Identities = 30/54 (55%), Positives = 44/54 (81%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILR++FVELY+ IL++LL+ FQ ++P L FPP P +G+FD++E+L S YFFN Sbjct: 907 QILRQQFVELYSMPILDNLLEEFQMAFPTLEFPPCPPQGNFDVREVLTSTYFFN 960 [58][TOP] >UniRef100_Q0QFR1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba castellanii RepID=Q0QFR1_ACACA Length = 512 Score = 67.8 bits (164), Expect = 6e-10 Identities = 29/52 (55%), Positives = 39/52 (75%) Frame = -1 Query: 589 ILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFF 434 ILR FV+L++ +L+DLL F+ +YP + FPPVP +GD DLKEI+ S YFF Sbjct: 460 ILRRTFVDLHSQPLLDDLLAHFKRTYPGIEFPPVPPKGDLDLKEIINSPYFF 511 [59][TOP] >UniRef100_A0CCN6 Chromosome undetermined scaffold_168, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0CCN6_PARTE Length = 1035 Score = 67.0 bits (162), Expect = 1e-09 Identities = 28/52 (53%), Positives = 41/52 (78%) Frame = -1 Query: 589 ILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFF 434 +LRE+FV L++ +LEDL SFQ +P+L FPP+P+RG FDL+++ +S YFF Sbjct: 983 LLREQFVRLHSQPLLEDLRDSFQRRFPHLEFPPIPERGQFDLEKVKQSVYFF 1034 [60][TOP] >UniRef100_Q0QFS4 DNA-directed RNA polymerase n=1 Tax=Rosculus sp. ATCC 50888 RepID=Q0QFS4_9EUKA Length = 1285 Score = 66.6 bits (161), Expect = 1e-09 Identities = 28/53 (52%), Positives = 40/53 (75%) Frame = -1 Query: 589 ILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +LR++F+ LY+ +LEDL +SF YP FPP+P+RG+ DL+E+ KS YFFN Sbjct: 1233 LLRDRFIHLYSGPVLEDLRESFVLRYPTAEFPPLPERGNLDLEEVRKSPYFFN 1285 [61][TOP] >UniRef100_Q0QFS1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stygamoeba sp. ruffled RepID=Q0QFS1_9EUKA Length = 661 Score = 66.2 bits (160), Expect = 2e-09 Identities = 28/54 (51%), Positives = 43/54 (79%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +ILR+KFV++++ +LE+LL SF+ +YPN+ FP VPK D DL ++L+S YFF+ Sbjct: 608 QILRQKFVDMHSEPLLENLLASFRRNYPNVDFPDVPKSHDLDLSQVLESPYFFH 661 [62][TOP] >UniRef100_Q0R0H7 DNA-directed RNA polymerase n=1 Tax=Naegleria sp. TES-2005 RepID=Q0R0H7_9EUKA Length = 968 Score = 62.0 bits (149), Expect = 3e-08 Identities = 24/54 (44%), Positives = 39/54 (72%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +I+RE+F+ L++ +LE+L +F YPN+ FPP+PK+G DL +L + YFF+ Sbjct: 915 KIIREQFINLHSQPLLEELYATFTRLYPNIQFPPLPKKGTLDLNRVLDAPYFFD 968 [63][TOP] >UniRef100_Q95NZ8 DNA-directed RNA polymerase n=1 Tax=Dictyostelium discoideum RepID=Q95NZ8_DICDI Length = 950 Score = 60.5 bits (145), Expect = 1e-07 Identities = 26/53 (49%), Positives = 40/53 (75%) Frame = -1 Query: 589 ILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 ILR +FVEL+ ILE LL+ FQ YP++ FP +PK+G+ D+ ++ +S+YFF+ Sbjct: 898 ILRNEFVELHKQPILERLLEWFQVRYPDIKFPKLPKKGELDINKVKESRYFFH 950 [64][TOP] >UniRef100_B7GAR6 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GAR6_PHATR Length = 576 Score = 58.9 bits (141), Expect = 3e-07 Identities = 25/51 (49%), Positives = 38/51 (74%) Frame = -1 Query: 586 LREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFF 434 LR+ FV+LY+ +LE L Q+++ YP L FP +PKRGD +L E+ +++YFF Sbjct: 525 LRDVFVDLYSQPLLERLKQTWEMRYPELEFPDIPKRGDLNLAEVKQAKYFF 575 [65][TOP] >UniRef100_B7GAR5 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GAR5_PHATR Length = 1188 Score = 58.9 bits (141), Expect = 3e-07 Identities = 25/51 (49%), Positives = 38/51 (74%) Frame = -1 Query: 586 LREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFF 434 LR+ FV+LY+ +LE L Q+++ YP L FP +PKRGD +L E+ +++YFF Sbjct: 1137 LRDVFVDLYSQPLLERLKQTWEMRYPELEFPDIPKRGDLNLAEVKQAKYFF 1187 [66][TOP] >UniRef100_B8BVD8 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BVD8_THAPS Length = 1217 Score = 58.5 bits (140), Expect = 4e-07 Identities = 24/52 (46%), Positives = 37/52 (71%) Frame = -1 Query: 589 ILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFF 434 ILRE F++LY+ +LEDL S++ YP++ FP VP +G+ DL ++ + YFF Sbjct: 1165 ILRECFIDLYSQPLLEDLKDSWELRYPSITFPDVPTKGELDLNDVKSAPYFF 1216 [67][TOP] >UniRef100_Q0QFS5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Polysphondylium pallidum RepID=Q0QFS5_POLPA Length = 862 Score = 57.8 bits (138), Expect = 6e-07 Identities = 26/53 (49%), Positives = 36/53 (67%) Frame = -1 Query: 589 ILREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +LR +FVEL++ ILE L + F YP + PPVP RG DLK++ S+YFF+ Sbjct: 810 MLRHQFVELHSQPILERLREWFNHRYPTVNIPPVPNRGSLDLKKVRDSKYFFH 862 [68][TOP] >UniRef100_Q0QFS0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Paravahlkampfia sp. LA RepID=Q0QFS0_9EUKA Length = 400 Score = 57.4 bits (137), Expect = 8e-07 Identities = 22/52 (42%), Positives = 39/52 (75%) Frame = -1 Query: 586 LREKFVELYTHAILEDLLQSFQESYPNLVFPPVPKRGDFDLKEILKSQYFFN 431 +R++F+EL++ +LE LL +F+ +P++ FPPVP +G DL I+ ++YFF+ Sbjct: 349 IRKQFIELHSQPLLETLLNTFKRMHPDVRFPPVPPKGSLDLNRIMHAKYFFD 400 [69][TOP] >UniRef100_Q010X3 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri RepID=Q010X3_OSTTA Length = 973 Score = 55.8 bits (133), Expect = 2e-06 Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 2/56 (3%) Frame = -1 Query: 592 RILREKFVELYTHAILEDLLQSFQESYPNLV--FPPVPKRGDFDLKEILKSQYFFN 431 +ILREKF+E+++ +LE+L + +ESYP++ FP PK GD DL + S YFF+ Sbjct: 918 KILREKFIEVHSEPLLENLYEELRESYPDVADKFPRPPKPGDLDLNVVRDSVYFFS 973