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[1][TOP]
>UniRef100_P56762 DNA-directed RNA polymerase subunit alpha n=1 Tax=Arabidopsis
thaliana RepID=RPOA_ARATH
Length = 329
Score = 227 bits (579), Expect = 3e-58
Identities = 108/108 (100%), Positives = 108/108 (100%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL
Sbjct: 213 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 260
[2][TOP]
>UniRef100_A4QKM4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Capsella
bursa-pastoris RepID=RPOA_CAPBU
Length = 327
Score = 225 bits (573), Expect = 1e-57
Identities = 106/108 (98%), Positives = 108/108 (100%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGYSLKMSNNFEDRSYPIDAVFMPV+NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL
Sbjct: 213 EALHEASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 260
[3][TOP]
>UniRef100_A4QLW5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nasturtium
officinale RepID=RPOA_NASOF
Length = 327
Score = 223 bits (567), Expect = 7e-57
Identities = 105/108 (97%), Positives = 107/108 (99%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGYSLKMSNNFEDRSYPIDAVFMPV+NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLINLFIPFLHVEEETFYLENNQHQVTLP FPFHNRLVNL
Sbjct: 213 EALHEASRNLINLFIPFLHVEEETFYLENNQHQVTLPLFPFHNRLVNL 260
[4][TOP]
>UniRef100_A4QLM6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lobularia
maritima RepID=RPOA_LOBMA
Length = 327
Score = 223 bits (567), Expect = 7e-57
Identities = 105/108 (97%), Positives = 107/108 (99%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGYSLKMSNNFEDRSYPIDAVFMPV+NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLINLFIPFLHVEEETFYLENNQHQVTLP FPFHNRLVNL
Sbjct: 213 EALHEASRNLINLFIPFLHVEEETFYLENNQHQVTLPLFPFHNRLVNL 260
[5][TOP]
>UniRef100_A4QLD8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lepidium
virginicum RepID=RPOA_LEPVR
Length = 327
Score = 223 bits (567), Expect = 7e-57
Identities = 105/108 (97%), Positives = 107/108 (99%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGYSLKMSNNFEDRSYPIDAVFMPV+NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLINLFIPFLHVEEETFYLENNQHQVTLP FPFHNRLVNL
Sbjct: 213 EALHEASRNLINLFIPFLHVEEETFYLENNQHQVTLPLFPFHNRLVNL 260
[6][TOP]
>UniRef100_A4QKD7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Barbarea verna
RepID=RPOA_BARVE
Length = 327
Score = 223 bits (567), Expect = 7e-57
Identities = 105/108 (97%), Positives = 107/108 (99%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGYSLKMSNNFEDRSYPIDAVFMPV+NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLINLFIPFLHVEEETFYLENNQHQVTLP FPFHNRLVNL
Sbjct: 213 EALHEASRNLINLFIPFLHVEEETFYLENNQHQVTLPLFPFHNRLVNL 260
[7][TOP]
>UniRef100_A4QJW3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Olimarabidopsis
pumila RepID=RPOA_OLIPU
Length = 327
Score = 222 bits (566), Expect = 9e-57
Identities = 105/108 (97%), Positives = 107/108 (99%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGYSLKMSNNFEDRSYPIDAVFMPV+NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLINLFIPFLHVEEET YLENNQHQVTLPFFPFHNRLVNL
Sbjct: 213 EALHEASRNLINLFIPFLHVEEETVYLENNQHQVTLPFFPFHNRLVNL 260
[8][TOP]
>UniRef100_Q9XQN8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Sinapis alba
RepID=RPOA_SINAL
Length = 327
Score = 218 bits (555), Expect = 2e-55
Identities = 102/108 (94%), Positives = 107/108 (99%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGYSLKMSNNFEDRSYPIDAVFMPV+NANHSIHSYGNGNEKQEILF+EIWTNGSLTPK
Sbjct: 153 RNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFIEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLINLFIPFLHVEEETFYLENNQHQVTLP FPFHN+LVNL
Sbjct: 213 EALYEASRNLINLFIPFLHVEEETFYLENNQHQVTLPVFPFHNKLVNL 260
[9][TOP]
>UniRef100_A4QL51 DNA-directed RNA polymerase subunit alpha n=1 Tax=Draba nemorosa
RepID=RPOA_DRANE
Length = 327
Score = 218 bits (555), Expect = 2e-55
Identities = 103/108 (95%), Positives = 106/108 (98%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGYSLKMSNNFEDRSYPIDAVFMPV+NANHSIHSYGNGN KQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYSLKMSNNFEDRSYPIDAVFMPVQNANHSIHSYGNGNGKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLINLFIPFLHVEEETF+LENNQHQVTLP FPFHNRLVNL
Sbjct: 213 EALHEASRNLINLFIPFLHVEEETFHLENNQHQVTLPLFPFHNRLVNL 260
[10][TOP]
>UniRef100_A4QKW3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Crucihimalaya
wallichii RepID=RPOA_CRUWA
Length = 327
Score = 218 bits (554), Expect = 2e-55
Identities = 102/108 (94%), Positives = 105/108 (97%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGYSLK+SNN EDRSYPIDAVFMPV+NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYSLKISNNLEDRSYPIDAVFMPVQNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNR NL
Sbjct: 213 EALHEASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRFFNL 260
[11][TOP]
>UniRef100_A4QK50 DNA-directed RNA polymerase subunit alpha n=1 Tax=Arabis hirsuta
RepID=RPOA_ARAHI
Length = 337
Score = 212 bits (539), Expect = 1e-53
Identities = 100/108 (92%), Positives = 103/108 (95%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGYSLK+ N FEDRSYPIDAVFMPV+NANHSIHSYGNGN KQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYSLKILNTFEDRSYPIDAVFMPVQNANHSIHSYGNGNGKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLINLFIPFLHVEEETFYLENNQH VTLP FPFHNRLVNL
Sbjct: 213 EALHEASRNLINLFIPFLHVEEETFYLENNQHHVTLPLFPFHNRLVNL 260
[12][TOP]
>UniRef100_A4QJE7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aethionema
cordifolium RepID=RPOA_AETCO
Length = 333
Score = 207 bits (528), Expect = 2e-52
Identities = 97/108 (89%), Positives = 103/108 (95%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGYSLKM N+FED SYPIDA+FMPV+NANHSIHSYG GNEKQEILFLEIWTNG+LTPK
Sbjct: 153 RNRGYSLKMPNHFEDGSYPIDALFMPVQNANHSIHSYGTGNEKQEILFLEIWTNGNLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLINLFIPFLHVEEETFYLENNQH+VTLP FPFHNRLV L
Sbjct: 213 EALHEASRNLINLFIPFLHVEEETFYLENNQHKVTLPLFPFHNRLVKL 260
[13][TOP]
>UniRef100_B1A967 RNA polymerase alpha chain n=1 Tax=Carica papaya RepID=B1A967_CARPA
Length = 327
Score = 201 bits (511), Expect = 2e-50
Identities = 93/108 (86%), Positives = 99/108 (91%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NNF+D SYPIDAVFMPV+NANHSIHSYG GNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYGIKTPNNFQDGSYPIDAVFMPVQNANHSIHSYGTGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLINLFIPFLH EEE FYLENNQH+VTLPFFPFH+RL L
Sbjct: 213 EALHEASRNLINLFIPFLHAEEEKFYLENNQHKVTLPFFPFHDRLAKL 260
[14][TOP]
>UniRef100_A4QJN1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aethionema
grandiflorum RepID=RPOA_AETGR
Length = 333
Score = 200 bits (508), Expect = 5e-50
Identities = 94/108 (87%), Positives = 100/108 (92%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGYSLKM N FED SYPIDA+FMPV+NANHSIHSYG GNE QEILFLEIWTNG+LTPK
Sbjct: 153 RNRGYSLKMPNPFEDGSYPIDALFMPVQNANHSIHSYGTGNENQEILFLEIWTNGNLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLINLFIPFLHVEEETFYLENN+ +VTLP FPFHNRLV L
Sbjct: 213 EALHEASRNLINLFIPFLHVEEETFYLENNEDKVTLPLFPFHNRLVKL 260
[15][TOP]
>UniRef100_Q2L938 DNA-directed RNA polymerase subunit alpha n=1 Tax=Gossypium
hirsutum RepID=RPOA_GOSHI
Length = 329
Score = 190 bits (483), Expect = 4e-47
Identities = 89/108 (82%), Positives = 94/108 (87%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NF D SYPIDAVFMPV NANHSIH YGN NEKQEILFLEIWTNGSLTPK
Sbjct: 155 RNRGYGIKTPKNFHDGSYPIDAVFMPVRNANHSIHCYGNDNEKQEILFLEIWTNGSLTPK 214
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH EEE +LENNQH VTLPFFPFH+RLV L
Sbjct: 215 EALHEASRNLIDLFIPFLHTEEENLHLENNQHDVTLPFFPFHDRLVKL 262
[16][TOP]
>UniRef100_B5AH30 RNA polymerase alpha subunit n=1 Tax=Gonystylus bancanus
RepID=B5AH30_9ROSI
Length = 329
Score = 189 bits (480), Expect = 8e-47
Identities = 87/108 (80%), Positives = 95/108 (87%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NNF D SYPID VFMPV N NHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 155 RNRGYGIKTPNNFHDGSYPIDVVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPK 214
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH EEE +LEN+QH+VTLPFFPFH++L L
Sbjct: 215 EALHEASRNLIDLFIPFLHAEEENSHLENSQHKVTLPFFPFHDKLTKL 262
[17][TOP]
>UniRef100_Q49KW6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Eucalyptus
globulus subsp. globulus RepID=RPOA_EUCGG
Length = 337
Score = 189 bits (479), Expect = 1e-46
Identities = 88/108 (81%), Positives = 96/108 (88%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NF+D SYPIDAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYHIKTPKNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH EEE +LENNQ++VTLPFF FH+RL L
Sbjct: 213 EALHEASRNLIDLFIPFLHAEEENLHLENNQYKVTLPFFTFHDRLAKL 260
[18][TOP]
>UniRef100_C0LEA6 RpoA n=1 Tax=Jatropha curcas RepID=C0LEA6_9ROSI
Length = 339
Score = 187 bits (475), Expect = 3e-46
Identities = 87/108 (80%), Positives = 95/108 (87%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K +NNF+D SYPIDAVFMPV NANHS+HSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYRIKPTNNFQDGSYPIDAVFMPVRNANHSVHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH EEE +LE NQH+VTLP F FH RL L
Sbjct: 213 EALHEASRNLIDLFIPFLHAEEENLHLEINQHKVTLPLFTFHGRLTKL 260
[19][TOP]
>UniRef100_Q14FC5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Populus alba
RepID=RPOA_POPAL
Length = 339
Score = 185 bits (469), Expect = 2e-45
Identities = 85/108 (78%), Positives = 95/108 (87%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NF+D SY IDAVFMPV NANHS+HSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYCMKPPKNFQDGSYSIDAVFMPVRNANHSVHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH EEE+F+LE NQH++TLP F FH+RL L
Sbjct: 213 EALHEASRNLIDLFIPFLHAEEESFHLEKNQHKITLPLFAFHDRLAKL 260
[20][TOP]
>UniRef100_A7R909 Chromosome undetermined scaffold_3171, whole genome shotgun
sequence n=1 Tax=Vitis vinifera RepID=A7R909_VITVI
Length = 313
Score = 184 bits (468), Expect = 2e-45
Identities = 87/108 (80%), Positives = 95/108 (87%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGYS+K NNF+D SYPIDAVFMPV NANHSIHSYGNGNE+QEILFLEIWTNGSLTPK
Sbjct: 147 RNRGYSIKRPNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNERQEILFLEIWTNGSLTPK 206
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH EEET +LE NQH+ TLP FH+RL L
Sbjct: 207 EALHEASRNLIDLFIPFLHAEEETLHLEYNQHKSTLPPLTFHDRLAKL 254
[21][TOP]
>UniRef100_Q0ZIY7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Vitis vinifera
RepID=RPOA_VITVI
Length = 331
Score = 184 bits (468), Expect = 2e-45
Identities = 87/108 (80%), Positives = 95/108 (87%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGYS+K NNF+D SYPIDAVFMPV NANHSIHSYGNGNE+QEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYSIKRPNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNERQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH EEET +LE NQH+ TLP FH+RL L
Sbjct: 213 EALHEASRNLIDLFIPFLHAEEETLHLEYNQHKSTLPPLTFHDRLAKL 260
[22][TOP]
>UniRef100_A4GYU3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Populus
trichocarpa RepID=RPOA_POPTR
Length = 339
Score = 184 bits (468), Expect = 2e-45
Identities = 85/108 (78%), Positives = 94/108 (87%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NF+D SY IDAVFMPV NANHS+HSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYCMKPPKNFQDGSYSIDAVFMPVRNANHSVHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH EEE F+LE NQH++TLP F FH+RL L
Sbjct: 213 EALHEASRNLIDLFIPFLHAEEENFHLEKNQHKITLPLFAFHDRLAKL 260
[23][TOP]
>UniRef100_Q09G14 DNA-directed RNA polymerase subunit alpha n=1 Tax=Platanus
occidentalis RepID=RPOA_PLAOC
Length = 337
Score = 179 bits (454), Expect = 9e-44
Identities = 84/108 (77%), Positives = 93/108 (86%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NN +D SYPIDAVFMPV NANHSIHSY NGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYRMKTPNNSQDGSYPIDAVFMPVRNANHSIHSYANGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH +EE LE+NQ+ VTLPFF FH+RL +
Sbjct: 213 EALHEASRNLIDLFIPFLHAQEENILLEDNQNGVTLPFFTFHDRLAKI 260
[24][TOP]
>UniRef100_Q33C00 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nicotiana
tomentosiformis RepID=RPOA_NICTO
Length = 337
Score = 179 bits (453), Expect = 1e-43
Identities = 83/108 (76%), Positives = 94/108 (87%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K +NF+D SYPIDAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH+EE+ YL++NQH V L F FH++L L
Sbjct: 213 EALHEASRNLIDLFIPFLHIEEDNLYLQDNQHTVPLSPFTFHDKLAKL 260
[25][TOP]
>UniRef100_Q3C1M3 DNA-directed RNA polymerase subunit alpha n=2 Tax=Nicotiana
RepID=RPOA_NICSY
Length = 337
Score = 178 bits (451), Expect = 2e-43
Identities = 83/108 (76%), Positives = 94/108 (87%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K +NF+D SYPIDAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH+EE+ YL++NQH V L F FH++L L
Sbjct: 213 EALHEASRNLIDLFIPFLHMEEDNLYLQDNQHTVPLSPFTFHDKLAKL 260
[26][TOP]
>UniRef100_Q68RX5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Panax ginseng
RepID=RPOA_PANGI
Length = 353
Score = 177 bits (450), Expect = 3e-43
Identities = 86/109 (78%), Positives = 93/109 (85%), Gaps = 1/109 (0%)
Frame = -3
Query: 326 RNRGYSLKM-SNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTP 150
RNRGY +K +NNF+D SYPIDAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTP
Sbjct: 153 RNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTP 212
Query: 149 KEALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
KEALHQASRNLI+LFIPFLH EEE +L +NQH V LP F FH +L L
Sbjct: 213 KEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHEKLTKL 261
[27][TOP]
>UniRef100_Q8S8V9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Atropa belladonna
RepID=RPOA_ATRBE
Length = 337
Score = 177 bits (450), Expect = 3e-43
Identities = 83/108 (76%), Positives = 93/108 (86%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NF+D SYPIDAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYLIKTPQNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH+EE+ YL++NQH V L F FH++L L
Sbjct: 213 EALHEASRNLIDLFIPFLHMEEDNLYLQDNQHTVPLSPFTFHDKLAKL 260
[28][TOP]
>UniRef100_B0Z4Q8 RNA polymerase alpha subunit n=2 Tax=Oenothera RepID=B0Z4Q8_OENAR
Length = 366
Score = 177 bits (449), Expect = 3e-43
Identities = 82/108 (75%), Positives = 91/108 (84%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NNF+D SYPIDAVFMPV NANHSIHSYGN NEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYHIKSPNNFQDGSYPIDAVFMPVRNANHSIHSYGNQNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LF+PFLH EEE +L NN++ VT P F FH +L L
Sbjct: 213 EALHEASRNLIDLFLPFLHAEEENLHLGNNKYNVTFPLFTFHKKLAKL 260
[29][TOP]
>UniRef100_B2XWQ5 RNA polymerase alpha subunit n=1 Tax=Fagopyrum esculentum subsp.
ancestrale RepID=B2XWQ5_FAGEA
Length = 337
Score = 177 bits (448), Expect = 4e-43
Identities = 82/108 (75%), Positives = 94/108 (87%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NNF+D SYPID VFMPV N NHSIHSY NGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYRIKTPNNFQDGSYPIDVVFMPVRNVNHSIHSYSNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LFIPFL+ E+E F+LE+NQ +VTLP F FH+RL+ L
Sbjct: 213 EALYEASRNLIDLFIPFLYAEKENFHLEDNQDRVTLPLFLFHDRLIEL 260
[30][TOP]
>UniRef100_Q2MI69 DNA-directed RNA polymerase subunit alpha n=1 Tax=Solanum
lycopersicum RepID=RPOA_SOLLC
Length = 337
Score = 176 bits (447), Expect = 6e-43
Identities = 82/108 (75%), Positives = 93/108 (86%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K +NF+D SYPIDAVFMPV NANHSIHSYGNGNEKQEILF+EIWTNGSLTPK
Sbjct: 153 RNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFIEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH ASRNLI+LFIPFLH+EE+ YL++NQH V L F FH++L L
Sbjct: 213 EALHDASRNLIDLFIPFLHMEEDNLYLQDNQHTVPLSPFTFHDKLAKL 260
[31][TOP]
>UniRef100_Q2MIF6 DNA-directed RNA polymerase subunit alpha n=2 Tax=Solanum
RepID=RPOA_SOLBU
Length = 337
Score = 176 bits (447), Expect = 6e-43
Identities = 82/108 (75%), Positives = 93/108 (86%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K +NF+D SYPIDAVFMPV NANHSIHSYGNGNEKQEILF+EIWTNGSLTPK
Sbjct: 153 RNRGYLIKTPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFIEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH ASRNLI+LFIPFLH+EE+ YL++NQH V L F FH++L L
Sbjct: 213 EALHDASRNLIDLFIPFLHMEEDNLYLQDNQHTVPLSPFTFHDKLAKL 260
[32][TOP]
>UniRef100_Q09FS9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nandina domestica
RepID=RPOA_NANDO
Length = 338
Score = 176 bits (446), Expect = 7e-43
Identities = 83/108 (76%), Positives = 93/108 (86%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K N ++ SYPIDAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYRMKTPNKAQNGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH EE+ LE+NQ++VTLPFF FH+ L L
Sbjct: 213 EALHEASRNLIDLFIPFLHAEEQDIILEDNQNRVTLPFFTFHDGLAKL 260
[33][TOP]
>UniRef100_A0ZZ67 DNA-directed RNA polymerase subunit alpha n=1 Tax=Gossypium
barbadense RepID=RPOA_GOSBA
Length = 330
Score = 176 bits (446), Expect = 7e-43
Identities = 86/109 (78%), Positives = 91/109 (83%), Gaps = 1/109 (0%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NF D SYPIDAVFMPV NANHSIH YGN NEKQEILFLEIWTNGSLTPK
Sbjct: 155 RNRGYGIKTPKNFHDGSYPIDAVFMPVRNANHSIHCYGNDNEKQEILFLEIWTNGSLTPK 214
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLP-FFPFHNRLVNL 3
EALH+ASRNLI+LFI FLH +EE +LENNQH VTL FFPFH RLV L
Sbjct: 215 EALHEASRNLIDLFIHFLHAKEENLHLENNQHDVTLHFFFPFHYRLVKL 263
[34][TOP]
>UniRef100_B5LMQ5 RNA polymerase alpha subunit n=1 Tax=Cicer arietinum
RepID=B5LMQ5_CICAR
Length = 333
Score = 175 bits (443), Expect = 2e-42
Identities = 83/106 (78%), Positives = 90/106 (84%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NN +D SY IDAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYRIKTLNNIQDESYTIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLV 9
EAL +ASRNLI+LFIPFLH EE+ LENNQ +VTLP F FH+R V
Sbjct: 213 EALFEASRNLIDLFIPFLHAEEDKLNLENNQQKVTLPLFTFHDRFV 258
[35][TOP]
>UniRef100_Q9MTJ3 DNA-directed RNA polymerase subunit alpha n=3 Tax=Oenothera
RepID=RPOA_OENEH
Length = 366
Score = 175 bits (443), Expect = 2e-42
Identities = 81/108 (75%), Positives = 90/108 (83%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NNF+D SYPIDAVFMPV NANHSIHSYGN NEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYHIKSPNNFQDGSYPIDAVFMPVRNANHSIHSYGNQNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LF+PFLH EEE +L N++ VT P F FH +L L
Sbjct: 213 EALHEASRNLIDLFLPFLHAEEENLHLGKNKYNVTFPLFTFHKKLAKL 260
[36][TOP]
>UniRef100_C6TK62 Putative uncharacterized protein (Fragment) n=1 Tax=Glycine max
RepID=C6TK62_SOYBN
Length = 269
Score = 174 bits (442), Expect = 2e-42
Identities = 82/105 (78%), Positives = 90/105 (85%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NF+D SYPIDA FMPV N NHSIHSY NGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYRIKTLKNFQDGSYPIDATFMPVRNVNHSIHSYVNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRL 12
EAL++ASRNLI+LFIPFLH EE+ F LENNQH+VTLP F FH+ L
Sbjct: 213 EALYEASRNLIDLFIPFLHAEEDNFNLENNQHKVTLPLFTFHDIL 257
[37][TOP]
>UniRef100_Q2PMQ3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Glycine max
RepID=RPOA_SOYBN
Length = 333
Score = 174 bits (442), Expect = 2e-42
Identities = 82/105 (78%), Positives = 90/105 (85%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NF+D SYPIDA FMPV N NHSIHSY NGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYRIKTLKNFQDGSYPIDATFMPVRNVNHSIHSYVNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRL 12
EAL++ASRNLI+LFIPFLH EE+ F LENNQH+VTLP F FH+ L
Sbjct: 213 EALYEASRNLIDLFIPFLHAEEDNFNLENNQHKVTLPLFTFHDIL 257
[38][TOP]
>UniRef100_A0A367 DNA-directed RNA polymerase subunit alpha n=1 Tax=Coffea arabica
RepID=RPOA_COFAR
Length = 335
Score = 174 bits (441), Expect = 3e-42
Identities = 83/108 (76%), Positives = 93/108 (86%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NF+D SYPIDAVFMP+ NAN+SIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYLIKTPQNFQDGSYPIDAVFMPIRNANYSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALHQASRNLI+LFIPFLH+EE+ +LENNQH V L F FH++L L
Sbjct: 213 EALHQASRNLIDLFIPFLHMEEQNSHLENNQHTVPLAPFFFHDKLDKL 260
[39][TOP]
>UniRef100_A6MM68 DNA-directed RNA polymerase subunit alpha n=1 Tax=Buxus microphylla
RepID=RPOA_BUXMI
Length = 337
Score = 174 bits (441), Expect = 3e-42
Identities = 81/105 (77%), Positives = 91/105 (86%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY++K N +D YPIDAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYNMKTPKNSQDGRYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRL 12
EALH+ASRNLI+LFIPFLH EE F L++NQ++V LP F FH+RL
Sbjct: 213 EALHEASRNLIDLFIPFLHANEENFILKDNQNKVALPLFTFHDRL 257
[40][TOP]
>UniRef100_C3UP04 RNA polymerase alpha subunit n=1 Tax=Megaleranthis saniculifolia
RepID=C3UP04_9MAGN
Length = 328
Score = 174 bits (440), Expect = 4e-42
Identities = 82/105 (78%), Positives = 93/105 (88%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NN ++RSYPIDAVFMPV NANHSIHSYGNGNEKQEILFLEIWT+GSLTPK
Sbjct: 153 RNRGYRMKTPNNAQERSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTDGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRL 12
EAL++ASRNLI+LFIPFLH EE+ LE+NQ +VTLPFF FH+ L
Sbjct: 213 EALYEASRNLIDLFIPFLHAEEQDTKLEDNQSRVTLPFFTFHDGL 257
[41][TOP]
>UniRef100_Q0G9T0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Daucus carota
RepID=RPOA_DAUCA
Length = 353
Score = 173 bits (439), Expect = 5e-42
Identities = 84/109 (77%), Positives = 93/109 (85%), Gaps = 1/109 (0%)
Frame = -3
Query: 326 RNRGYSLKM-SNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTP 150
RNRGY +K +NN +D SYPIDAVFMPV NANHSIHSYGNGN+KQEILFLEIWTNGSLTP
Sbjct: 153 RNRGYLIKTPNNNSKDGSYPIDAVFMPVRNANHSIHSYGNGNDKQEILFLEIWTNGSLTP 212
Query: 149 KEALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
KEALH+ASRNLI+LFIPFLH EEE +L NNQH V LP F FH++L L
Sbjct: 213 KEALHEASRNLIDLFIPFLHTEEENLHLANNQHMVPLPPFTFHDKLDKL 261
[42][TOP]
>UniRef100_UPI0001596B8A RNA polymerase alpha subunit n=1 Tax=Medicago truncatula
RepID=UPI0001596B8A
Length = 333
Score = 173 bits (438), Expect = 6e-42
Identities = 82/106 (77%), Positives = 90/106 (84%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R RGY +K NN +D SY IDAVFMPV NANHSIHSY NGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RKRGYRIKTLNNIQDGSYTIDAVFMPVRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLV 9
EAL++ASRNLI+LFIPFLH EEE ENNQH+VTLP F FH+RL+
Sbjct: 213 EALYEASRNLIDLFIPFLHAEEENLNFENNQHKVTLPLFTFHDRLL 258
[43][TOP]
>UniRef100_A9L9C8 RNA polymerase alpha subunit n=1 Tax=Lemna minor RepID=A9L9C8_LEMMI
Length = 284
Score = 173 bits (438), Expect = 6e-42
Identities = 81/108 (75%), Positives = 94/108 (87%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ +NN +D SYPIDAVFMPV NANHSI+SYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RDRGYRMRPTNNSQDGSYPIDAVFMPVRNANHSIYSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH EE+ LE N+ + TLP F FH++LVNL
Sbjct: 213 EALHEASRNLIDLFIPFLHAEEKDINLEENKSRFTLPLFTFHDKLVNL 260
[44][TOP]
>UniRef100_A7Y3I1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Ipomoea purpurea
RepID=RPOA_IPOPU
Length = 337
Score = 173 bits (438), Expect = 6e-42
Identities = 81/108 (75%), Positives = 92/108 (85%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY LK +NFED SYPIDAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYILKTHHNFEDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH+EEE +LE+ +H + L FH+++ L
Sbjct: 213 EALHEASRNLIDLFIPFLHMEEENLHLEDGEHTIPLSPLSFHDKVAKL 260
[45][TOP]
>UniRef100_Q4VZK3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cucumis sativus
RepID=RPOA_CUCSA
Length = 333
Score = 172 bits (437), Expect = 8e-42
Identities = 81/110 (73%), Positives = 93/110 (84%), Gaps = 2/110 (1%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY ++ NNF+D SYP+DA+FMPV N NHSIHSY NGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYHIQTPNNFQDASYPMDAIFMPVRNVNHSIHSYVNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEE--ETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH EE E F+L+NN+ +VTLP F FH +L L
Sbjct: 213 EALHEASRNLIDLFIPFLHAEEEKENFHLKNNKKKVTLPLFTFHEKLAKL 262
[46][TOP]
>UniRef100_B1NWI2 RNA polymerase alpha subunit n=1 Tax=Manihot esculenta
RepID=B1NWI2_MANES
Length = 343
Score = 172 bits (436), Expect = 1e-41
Identities = 84/112 (75%), Positives = 94/112 (83%), Gaps = 4/112 (3%)
Frame = -3
Query: 326 RNRGYSLKMSNNFE--DRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLT 153
RNRGY +K +NNF+ D SY IDAVFMPV NANHS+HSYGNGNEKQEILFLEIWTNGSLT
Sbjct: 153 RNRGYRIKPTNNFQVQDGSYSIDAVFMPVRNANHSVHSYGNGNEKQEILFLEIWTNGSLT 212
Query: 152 PKEALHQASRNLINLFIPFLHVEEETFYL--ENNQHQVTLPFFPFHNRLVNL 3
PKEALH+ASRNLI+ FIPFLH EEE +L E NQH+VTLP F FH++L L
Sbjct: 213 PKEALHEASRNLIDFFIPFLHAEEENLHLEIEKNQHKVTLPLFCFHDKLTKL 264
[47][TOP]
>UniRef100_A7KVR0 RNA polymerase alpha subunit (Fragment) n=1 Tax=Olea europaea
RepID=A7KVR0_OLEEU
Length = 280
Score = 172 bits (436), Expect = 1e-41
Identities = 83/108 (76%), Positives = 91/108 (84%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +KM +NF+D SYPIDAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 127 RNRGYLIKMPHNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 186
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+A RNLI+LFIPFLH EEE LE+NQH V L FH++L L
Sbjct: 187 EALHEACRNLIDLFIPFLHKEEENLPLEDNQHTVPLSPLTFHDKLDKL 234
[48][TOP]
>UniRef100_P06505 DNA-directed RNA polymerase subunit alpha n=1 Tax=Spinacia oleracea
RepID=RPOA_SPIOL
Length = 335
Score = 172 bits (435), Expect = 1e-41
Identities = 81/108 (75%), Positives = 92/108 (85%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NNF+D S+PIDA+FMPV N NHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYHIKAPNNFQDGSFPIDALFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+L IPFLH EE LE+NQH+V+LP F FHNRL +
Sbjct: 213 EALYEASRNLIDLLIPFLHAEENV-NLEDNQHKVSLPLFTFHNRLAEI 259
[49][TOP]
>UniRef100_A8SED5 DNA-directed RNA polymerase subunit alpha n=2 Tax=Ceratophyllum
demersum RepID=RPOA_CERDE
Length = 337
Score = 171 bits (434), Expect = 2e-41
Identities = 80/108 (74%), Positives = 91/108 (84%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY LK NN++D SYPID VFMPV NANHSIHSYGNG EKQEILFLEIWTNGSLTPK
Sbjct: 153 RDRGYRLKTPNNYQDGSYPIDTVFMPVRNANHSIHSYGNGTEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLINLFIPFLH EE+ LE++++ T+P F FHN L NL
Sbjct: 213 EALYEASRNLINLFIPFLHAEEQEILLEDSENISTVPLFTFHNELANL 260
[50][TOP]
>UniRef100_Q0G9I7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Liriodendron
tulipifera RepID=RPOA_LIRTU
Length = 337
Score = 171 bits (432), Expect = 3e-41
Identities = 79/108 (73%), Positives = 92/108 (85%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY +K NN++D SYPIDAV MPV NANHSIHSYGN NEKQEILFLEIWTNGSLTPK
Sbjct: 153 RDRGYRMKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNRNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH EE+ LE+N ++ T+P F FH+RL N+
Sbjct: 213 EALHEASRNLIDLFIPFLHAEEQDIVLEDNPNRFTVPLFTFHDRLANI 260
[51][TOP]
>UniRef100_Q09ME5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Citrus sinensis
RepID=RPOA_CITSI
Length = 328
Score = 171 bits (432), Expect = 3e-41
Identities = 82/109 (75%), Positives = 94/109 (86%), Gaps = 1/109 (0%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRS-YPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTP 150
R+RGY++K N F+D + YPIDAVFMPV NANHSI SYGNGNEKQEILFLEIWTNGSLTP
Sbjct: 153 RSRGYNIKTPNTFQDGNCYPIDAVFMPVRNANHSIQSYGNGNEKQEILFLEIWTNGSLTP 212
Query: 149 KEALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
KEALH+ASR+LI+LFIPFL E+E LENNQ++VTLPFF FH+RL L
Sbjct: 213 KEALHEASRSLIDLFIPFLQAEDENLPLENNQYKVTLPFFTFHDRLAKL 261
[52][TOP]
>UniRef100_Q09WY5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Morus indica
RepID=RPOA_MORIN
Length = 323
Score = 170 bits (430), Expect = 5e-41
Identities = 82/105 (78%), Positives = 89/105 (84%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NNF++ SYPIDAVFMPV NANHSIHSY NGNE QEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYRIKTPNNFQNGSYPIDAVFMPVRNANHSIHSYVNGNENQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRL 12
EALH+ASRNLI+LFIPF H EE +LENNQH+ TLP F FH RL
Sbjct: 213 EALHEASRNLIDLFIPFFHAEE---HLENNQHKGTLPLFNFHGRL 254
[53][TOP]
>UniRef100_A9QBD4 RNA polymerase alpha subunit (Fragment) n=1 Tax=Elaeis oleifera
RepID=A9QBD4_ELAOL
Length = 339
Score = 168 bits (426), Expect = 2e-40
Identities = 80/108 (74%), Positives = 90/108 (83%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY +K +NN +D SYPIDAV MPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RDRGYRMKSANNSQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LFIPFLH EEE E N+++ LP F F NRL NL
Sbjct: 213 EALYEASRNLIDLFIPFLHAEEEDINFEENKNRFPLPLFTFQNRLTNL 260
[54][TOP]
>UniRef100_Q4FG99 RNA polymerase alpha chain (Fragment) n=1 Tax=Yucca schidigera
RepID=Q4FG99_9ASPA
Length = 337
Score = 167 bits (423), Expect = 3e-40
Identities = 79/108 (73%), Positives = 90/108 (83%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY + +NN +D SYPIDAV MPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 151 RDRGYRINPTNNSQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 210
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LFIPFLH EE + E N+++ TLP F F NRL NL
Sbjct: 211 EALYEASRNLIDLFIPFLHAEEGDIHFEENKNRFTLPLFTFQNRLTNL 258
[55][TOP]
>UniRef100_A6MMF4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chloranthus
spicatus RepID=RPOA_CHLSC
Length = 334
Score = 167 bits (423), Expect = 3e-40
Identities = 78/107 (72%), Positives = 90/107 (84%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY +K N +++ SYPIDAV MPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RDRGYRMKTPNKYQNGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EALH+ASRNLI+LFIPFLH EEE LE+N ++ +PFF FH+ L N
Sbjct: 213 EALHEASRNLIDLFIPFLHAEEEGIRLEDNPNRFNIPFFTFHDGLAN 259
[56][TOP]
>UniRef100_Q4FGA0 RNA polymerase alpha chain (Fragment) n=1 Tax=Typha latifolia
RepID=Q4FGA0_TYPLA
Length = 339
Score = 167 bits (422), Expect = 4e-40
Identities = 79/108 (73%), Positives = 91/108 (84%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ +NN +D SYPIDAV MPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RDRGYRMEPTNNSQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LFIPFLH EEE E N+++ TLPF F +RL NL
Sbjct: 213 EALYEASRNLIDLFIPFLHAEEEDINFEENKNRFTLPFLTFQDRLTNL 260
[57][TOP]
>UniRef100_A9QAY1 RNA polymerase alpha subunit (Fragment) n=1 Tax=Anethum graveolens
RepID=A9QAY1_9APIA
Length = 338
Score = 167 bits (422), Expect = 4e-40
Identities = 82/111 (73%), Positives = 93/111 (83%), Gaps = 3/111 (2%)
Frame = -3
Query: 326 RNRGYSLKM-SNNFEDRSYPIDAVFMPVENANHSIHSYGNGN--EKQEILFLEIWTNGSL 156
R+RGY +K +NNF+D SYPIDAVFMP+ NANHSIHSYGNGN +KQEILFLEIWTNGSL
Sbjct: 153 RSRGYLIKTPNNNFQDGSYPIDAVFMPIRNANHSIHSYGNGNGNDKQEILFLEIWTNGSL 212
Query: 155 TPKEALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
TPKEALH+ASRNLI+LFIPFLH EEE +L +NQH V LP F FH+ L L
Sbjct: 213 TPKEALHEASRNLIDLFIPFLHTEEENLHLADNQHMVPLPPFTFHDNLDKL 263
[58][TOP]
>UniRef100_A4GGD7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Phaseolus
vulgaris RepID=RPOA_PHAVU
Length = 333
Score = 167 bits (422), Expect = 4e-40
Identities = 79/106 (74%), Positives = 89/106 (83%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NF+D SY IDA FMPV N N+SIHSY NGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYRIKTLKNFQDGSYDIDARFMPVRNVNYSIHSYVNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLV 9
EAL++AS+NLI LFIPFLH EE+ F+LE NQH+VTLP F FH+ LV
Sbjct: 213 EALYEASQNLIELFIPFLHAEEDNFHLEKNQHKVTLPLFTFHDILV 258
[59][TOP]
>UniRef100_P13911 DNA-directed RNA polymerase subunit alpha n=1 Tax=Pisum sativum
RepID=RPOA_PEA
Length = 334
Score = 167 bits (422), Expect = 4e-40
Identities = 78/103 (75%), Positives = 87/103 (84%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R RGY +K NN +D SY IDAVFMPV NANHSIHSY NGN+KQEILFLEIWTNGSLTPK
Sbjct: 152 RKRGYRIKTLNNIQDGSYTIDAVFMPVRNANHSIHSYVNGNQKQEILFLEIWTNGSLTPK 211
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHN 18
EAL++ASRNLI+LFIPFLH EEE ENNQH++TLP F FH+
Sbjct: 212 EALYEASRNLIDLFIPFLHAEEENLNFENNQHKMTLPLFTFHD 254
[60][TOP]
>UniRef100_A6MMX6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Illicium
oligandrum RepID=RPOA_ILLOL
Length = 331
Score = 167 bits (422), Expect = 4e-40
Identities = 76/108 (70%), Positives = 91/108 (84%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY +K NN++D SYPIDAV MPV NANHSIHSYGNGNEKQEILFLEIWTNGS TPK
Sbjct: 153 RDRGYRIKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSFTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EE+ +E+NQ++ T P F FH+ L N+
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEQDINVEDNQNRATAPLFTFHDGLTNI 260
[61][TOP]
>UniRef100_Q4FGA2 RNA polymerase alpha chain (Fragment) n=1 Tax=Nuphar advena
RepID=Q4FGA2_NUPAD
Length = 336
Score = 166 bits (421), Expect = 6e-40
Identities = 77/108 (71%), Positives = 91/108 (84%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R RGY ++ NN++D SYPIDAV MPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RGRGYCMRTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LFIPFLH EE+ +E+N + T+PFF FH+ L N+
Sbjct: 213 EALYEASRNLIDLFIPFLHAEEQDINIEDNLKRATVPFFTFHDGLDNM 260
[62][TOP]
>UniRef100_Q5QA74 DNA-directed RNA polymerase subunit alpha n=1 Tax=Acorus gramineus
RepID=RPOA_ACOGR
Length = 337
Score = 166 bits (419), Expect = 1e-39
Identities = 79/108 (73%), Positives = 90/108 (83%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY +K + N +D SYPIDAV MPV NANHSIHSYGNGN+KQEILFLEIWTNGSLTPK
Sbjct: 153 RDRGYRMKTTKNSQDGSYPIDAVSMPVRNANHSIHSYGNGNQKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH EEE E NQ++ T+P F F +RL NL
Sbjct: 213 EALHEASRNLIDLFIPFLHAEEEDINFEENQNRFTVPPFTFPDRLANL 260
[63][TOP]
>UniRef100_Q3V502 DNA-directed RNA polymerase subunit alpha n=2 Tax=Acorus
RepID=RPOA_ACOCL
Length = 337
Score = 166 bits (419), Expect = 1e-39
Identities = 79/108 (73%), Positives = 90/108 (83%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY +K + N +D SYPIDAV MPV NANHSIHSYGNGN+KQEILFLEIWTNGSLTPK
Sbjct: 153 RDRGYRMKTTKNSQDGSYPIDAVSMPVRNANHSIHSYGNGNQKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH EEE E NQ++ T+P F F +RL NL
Sbjct: 213 EALHEASRNLIDLFIPFLHAEEEDINFEENQNRFTVPPFTFPDRLANL 260
[64][TOP]
>UniRef100_Q8MC99 DNA-directed RNA polymerase subunit alpha n=1 Tax=Vigna angularis
RepID=RPOA_PHAAN
Length = 333
Score = 163 bits (412), Expect = 6e-39
Identities = 78/106 (73%), Positives = 88/106 (83%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NF+D SY IDA FMPV N N+SIHSY NGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYRIKTLKNFQDGSYDIDARFMPVRNVNYSIHSYVNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLV 9
EAL++AS+NLI+LFIPFLH EEE F LE +H+VTLP F FH+ LV
Sbjct: 213 EALYEASQNLIDLFIPFLHAEEENFNLEKKKHKVTLPLFTFHDILV 258
[65][TOP]
>UniRef100_Q9BBQ4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lotus japonicus
RepID=RPOA_LOTJA
Length = 333
Score = 163 bits (412), Expect = 6e-39
Identities = 77/105 (73%), Positives = 87/105 (82%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY + NF+D SY IDA+FMPV NANHSIHSY NGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RDRGYRINTLKNFQDGSYNIDAIFMPVRNANHSIHSYVNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRL 12
EAL++ASRNLI+LFIPFLH EEE ENN+H+VTLP F H+ L
Sbjct: 213 EALYEASRNLIDLFIPFLHAEEEKLNFENNEHKVTLPLFTCHDLL 257
[66][TOP]
>UniRef100_A6MMN9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Dioscorea
elephantipes RepID=RPOA_DIOEL
Length = 337
Score = 163 bits (412), Expect = 6e-39
Identities = 78/108 (72%), Positives = 89/108 (82%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY +K N +D SYPIDAVFMPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RDRGYRMKPITNSQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ TLP F +RL NL
Sbjct: 213 EALYEASRNLIDLFVPFLHAEEEDINFEENKNKFTLPPLTFQDRLSNL 260
[67][TOP]
>UniRef100_Q06RA0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Jasminum
nudiflorum RepID=RPOA_JASNU
Length = 355
Score = 162 bits (411), Expect = 8e-39
Identities = 78/104 (75%), Positives = 87/104 (83%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +KM +N +D SYPIDAVFMPV NANHSIHSYG+GNEK EILFLEIWTNGSLTPK
Sbjct: 153 RNRGYLMKMPHNSQDGSYPIDAVFMPVRNANHSIHSYGSGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNR 15
EALH+A RNLI+LFIPFLH EEET LE+N H V L FH++
Sbjct: 213 EALHEACRNLIDLFIPFLHKEEETSPLEDNHHTVPLSPLTFHDK 256
[68][TOP]
>UniRef100_Q06GM8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Piper cenocladum
RepID=RPOA_PIPCE
Length = 339
Score = 162 bits (410), Expect = 1e-38
Identities = 75/103 (72%), Positives = 88/103 (85%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGYS+K +N ED SYPIDA+FMPV NANHS+HSYGNGNEKQEILF+EIWTNGSLTPK
Sbjct: 153 RDRGYSMKTPHNDEDGSYPIDAIFMPVRNANHSVHSYGNGNEKQEILFIEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHN 18
EAL++ASRNLI+LFIPFLH EE +LE+N + V L F FH+
Sbjct: 213 EALYEASRNLIDLFIPFLHAEEREIHLEDNANGVPLALFTFHD 255
[69][TOP]
>UniRef100_Q7YJU6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Calycanthus
floridus var. glaucus RepID=RPOA_CALFG
Length = 340
Score = 162 bits (410), Expect = 1e-38
Identities = 78/110 (70%), Positives = 93/110 (84%), Gaps = 2/110 (1%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY +K NN++D SYPIDAV MPV NANHSIHSYG+GNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RDRGYRMKAPNNYQDGSYPIDAVSMPVRNANHSIHSYGSGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFY--LENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH EE+ + LE+NQ++ T+ F H+RL N+
Sbjct: 213 EALHEASRNLIDLFIPFLHAEEQDIHLNLEDNQNRFTVSPFTLHDRLGNI 262
[70][TOP]
>UniRef100_A9QBM7 RNA polymerase alpha subunit (Fragment) n=1 Tax=Musa acuminata
RepID=A9QBM7_MUSAC
Length = 339
Score = 161 bits (408), Expect = 2e-38
Identities = 77/108 (71%), Positives = 89/108 (82%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY K + N ++ SYPIDAV MPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RDRGYRTKPTTNSQNGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LFIPFLH EEE + N+++ TLP F F +RL NL
Sbjct: 213 EALYEASRNLIDLFIPFLHAEEEDINFKENKNRFTLPIFTFQDRLTNL 260
[71][TOP]
>UniRef100_A7QC74 Chromosome chr10 scaffold_76, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QC74_VITVI
Length = 310
Score = 161 bits (408), Expect = 2e-38
Identities = 80/108 (74%), Positives = 88/108 (81%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY+ SYPIDAVFMPV NANHSIHSYGNG+E+QEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYN---------GSYPIDAVFMPVRNANHSIHSYGNGSERQEILFLEIWTNGSLTPK 203
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH EEET +LE NQH+ TLP FH+RL L
Sbjct: 204 EALHEASRNLIDLFIPFLHAEEETLHLEYNQHKGTLPPLTFHDRLAKL 251
[72][TOP]
>UniRef100_A1XGS0 DNA-directed RNA polymerase subunit alpha n=2 Tax=Ranunculus
macranthus RepID=RPOA_RANMC
Length = 346
Score = 160 bits (405), Expect = 4e-38
Identities = 78/103 (75%), Positives = 88/103 (85%), Gaps = 1/103 (0%)
Frame = -3
Query: 323 NRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKE 144
NRGY +K NN + SYPIDAVFMPV NANHSIHSYGNGNE QEILFLEIWTNGSLTPKE
Sbjct: 154 NRGYRMKTPNNAQKGSYPIDAVFMPVRNANHSIHSYGNGNENQEILFLEIWTNGSLTPKE 213
Query: 143 ALHQASRNLINLFIPFLHVEEETFYLENNQ-HQVTLPFFPFHN 18
AL++ASRNLI+LFIPFLH EE+ L++NQ + VTLPFF FH+
Sbjct: 214 ALYEASRNLIDLFIPFLHAEEQDQNLKDNQKNGVTLPFFTFHD 256
[73][TOP]
>UniRef100_Q06GW5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Drimys
granadensis RepID=RPOA_DRIGR
Length = 339
Score = 159 bits (403), Expect = 7e-38
Identities = 79/110 (71%), Positives = 91/110 (82%), Gaps = 2/110 (1%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPI--DAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLT 153
R+RGY +K NN +D SYPI +AV MPV NANHSIHSYGNGNEKQEILFLEIWTNGSLT
Sbjct: 153 RDRGYRMKTPNNDQDGSYPIPIEAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLT 212
Query: 152 PKEALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
PKEALH+AS NLI+LFIPFLH EEE LE++ ++ TLPFF F ++L NL
Sbjct: 213 PKEALHEASHNLIDLFIPFLHGEEEDINLEDSLNRGTLPFFTFQDKLANL 262
[74][TOP]
>UniRef100_B8R4C0 RNA polymerase alpha subunit n=1 Tax=Trifolium subterraneum
RepID=B8R4C0_TRISU
Length = 337
Score = 158 bits (399), Expect = 2e-37
Identities = 78/108 (72%), Positives = 89/108 (82%), Gaps = 2/108 (1%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDA--VFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLT 153
R RGY K +N +D SY ID VFMPV +AN+SIHSY N NEKQEILFLEIWTNGSLT
Sbjct: 153 RARGYRKKTIDNIQDGSYTIDVDPVFMPVIHANYSIHSYLNANEKQEILFLEIWTNGSLT 212
Query: 152 PKEALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLV 9
PKEAL++A+RNLI+LFIPFLH EEE F+ ENNQH+VTLP F FH+RLV
Sbjct: 213 PKEALYEAARNLIDLFIPFLHAEEENFHFENNQHKVTLPLFAFHDRLV 260
[75][TOP]
>UniRef100_A8W3F3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cuscuta exaltata
RepID=RPOA_CUSEX
Length = 335
Score = 158 bits (399), Expect = 2e-37
Identities = 77/108 (71%), Positives = 89/108 (82%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NFED SYPIDAVFMPV NANHSIHSYGN EKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYFIKTHPNFEDGSYPIDAVFMPVRNANHSIHSYGN--EKQEILFLEIWTNGSLTPK 210
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH+EEE +LE+ H ++L F ++++ L
Sbjct: 211 EALHEASRNLIDLFIPFLHMEEENLHLEDADHTISLSPFTVYDKVAKL 258
[76][TOP]
>UniRef100_Q5IBI2 RNA polymerase alpha subunit (Fragment) n=1 Tax=Plantago rugelii
RepID=Q5IBI2_9LAMI
Length = 308
Score = 157 bits (397), Expect = 4e-37
Identities = 78/105 (74%), Positives = 86/105 (81%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY +K + F+DRSYPIDAVFMPV N NHSIHSYGN EKQEILFLEIWTNGSLTPK
Sbjct: 138 RSRGYLIKSPHIFQDRSYPIDAVFMPVRNVNHSIHSYGN--EKQEILFLEIWTNGSLTPK 195
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRL 12
EALH+ASRNLI+LFIPFLH EEE LENNQ V+ F FH +L
Sbjct: 196 EALHEASRNLIDLFIPFLHKEEENLPLENNQDTVSFSPFSFHEKL 240
[77][TOP]
>UniRef100_A9QC95 RNA polymerase alpha subunit (Fragment) n=1 Tax=Trachelium
caeruleum RepID=A9QC95_TRACE
Length = 337
Score = 157 bits (397), Expect = 4e-37
Identities = 75/100 (75%), Positives = 84/100 (84%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K + NF+D SYPIDAVFMPV N NHSI+SYG GN+K EILFLEIWTNGSLTPK
Sbjct: 153 RNRGYLIKTAKNFQDGSYPIDAVFMPVRNVNHSIYSYGTGNDKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFP 27
EALH+A+RNLI+LFIPFLH EEE LE+NQH LPF P
Sbjct: 213 EALHEAARNLIDLFIPFLHTEEENLDLEDNQHM--LPFRP 250
[78][TOP]
>UniRef100_Q4QZ04 DNA-directed RNA polymerase alpha chain n=1 Tax=Chrysanthemum x
morifolium RepID=Q4QZ04_CHRMO
Length = 335
Score = 156 bits (395), Expect = 6e-37
Identities = 75/108 (69%), Positives = 87/108 (80%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY +K N F+D SYPID VFMPV NANHSIHSY NGN+ EILFLEIWTNGSLTPK
Sbjct: 153 KNRGYLIKAPNTFQDGSYPIDPVFMPVRNANHSIHSYENGNK--EILFLEIWTNGSLTPK 210
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+L IPFLH +EE LE+NQH + LP F F+++L L
Sbjct: 211 EALHEASRNLIDLLIPFLHTKEENLNLEDNQHMIPLPPFTFYDKLAKL 258
[79][TOP]
>UniRef100_B2LMM5 RNA polymerase alpha subunit n=1 Tax=Guizotia abyssinica
RepID=B2LMM5_GUIAB
Length = 335
Score = 155 bits (393), Expect = 1e-36
Identities = 76/108 (70%), Positives = 87/108 (80%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY +K N F+D SYPID VFMPV NANHSIHSY NGN+ EILFLEIWTNGSLTPK
Sbjct: 153 KNRGYLIKAPNTFQDGSYPIDPVFMPVRNANHSIHSYENGNK--EILFLEIWTNGSLTPK 210
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+L IPFLH +EE LE+NQH V LP F F+++L L
Sbjct: 211 EALHEASRNLIDLLIPFLHTKEENLNLEDNQHIVPLPPFTFYDKLAKL 258
[80][TOP]
>UniRef100_Q6EW20 DNA-directed RNA polymerase subunit alpha n=1 Tax=Nymphaea alba
RepID=RPOA_NYMAL
Length = 341
Score = 155 bits (393), Expect = 1e-36
Identities = 75/110 (68%), Positives = 89/110 (80%), Gaps = 2/110 (1%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R RGY + NN++D SYPIDAV MPV NANHSIHSYGNGNEKQEILFLEIWTNGSLTPK
Sbjct: 153 RGRGYCTRTQNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETF--YLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LFIPFLH EE+ +E+N + ++PFF F + L N+
Sbjct: 213 EALYEASRNLIDLFIPFLHAEEQDINRNMEDNLKRASVPFFAFDDGLDNI 262
[81][TOP]
>UniRef100_Q1KXS7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Helianthus annuus
RepID=RPOA_HELAN
Length = 335
Score = 155 bits (393), Expect = 1e-36
Identities = 76/108 (70%), Positives = 87/108 (80%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY +K N F+D SYPID VFMPV NANHSIHSY NGN+ EILFLEIWTNGSLTPK
Sbjct: 153 KNRGYLIKAPNTFQDGSYPIDPVFMPVRNANHSIHSYENGNK--EILFLEIWTNGSLTPK 210
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+L IPFLH +EE LE+NQH V LP F F+++L L
Sbjct: 211 EALHEASRNLIDLLIPFLHTKEENLSLEDNQHIVPLPPFTFYDKLAKL 258
[82][TOP]
>UniRef100_B0FIU7 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta
lupuliformis RepID=B0FIU7_9ASTE
Length = 335
Score = 155 bits (391), Expect = 2e-36
Identities = 76/108 (70%), Positives = 88/108 (81%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY LK NFED SYPIDAVFMPV+NANHSIHSYGN EKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYFLKTHANFEDGSYPIDAVFMPVQNANHSIHSYGN--EKQEILFLEIWTNGSLTPK 210
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH+E+E +LE+ + L F ++++ L
Sbjct: 211 EALHEASRNLIDLFIPFLHIEKENLHLEDADRTIPLSPFTVYDKVAKL 258
[83][TOP]
>UniRef100_Q332U5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lactuca sativa
RepID=RPOA_LACSA
Length = 335
Score = 154 bits (389), Expect = 3e-36
Identities = 75/108 (69%), Positives = 86/108 (79%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY +K N F+D SYPID VFMPV NANHSIHSY NGN+ EILFLEIWTNGSLTPK
Sbjct: 153 KNRGYLIKAPNTFQDGSYPIDPVFMPVRNANHSIHSYENGNK--EILFLEIWTNGSLTPK 210
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+L IPFLH +EE LE NQH V LP F F+++L L
Sbjct: 211 EALYEASRNLIDLLIPFLHTKEENLNLEGNQHMVPLPPFTFYDKLAKL 258
[84][TOP]
>UniRef100_B0FIU6 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta japonica
RepID=B0FIU6_CUSJA
Length = 332
Score = 154 bits (388), Expect = 4e-36
Identities = 77/101 (76%), Positives = 85/101 (84%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NFED SYPIDAVFMPV+NANHSIHSYGN EKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYFIKTHANFEDGSYPIDAVFMPVQNANHSIHSYGN--EKQEILFLEIWTNGSLTPK 210
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPF 24
EALH+ASRNLI+LFIPFLH+E+E LE+ H T+P PF
Sbjct: 211 EALHEASRNLIDLFIPFLHMEKENLPLEDADH--TIPLSPF 249
[85][TOP]
>UniRef100_Q49CA2 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cuscuta japonica
RepID=RPOA_CUSJA
Length = 332
Score = 154 bits (388), Expect = 4e-36
Identities = 77/101 (76%), Positives = 85/101 (84%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K NFED SYPIDAVFMPV+NANHSIHSYGN EKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYFIKTHANFEDGSYPIDAVFMPVQNANHSIHSYGN--EKQEILFLEIWTNGSLTPK 210
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPF 24
EALH+ASRNLI+LFIPFLH+E+E LE+ H T+P PF
Sbjct: 211 EALHEASRNLIDLFIPFLHMEKENLPLEDADH--TIPLSPF 249
[86][TOP]
>UniRef100_Q3BAK5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Phalaenopsis
aphrodite subsp. formosana RepID=RPOA_PHAAO
Length = 337
Score = 151 bits (382), Expect = 2e-35
Identities = 71/107 (66%), Positives = 85/107 (79%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY +K +N+ D SYPID V MPV NANHSIHSYGNGNEKQEILF+EIWTNGSLTPK
Sbjct: 153 RDRGYRMKSTNDSHDGSYPIDIVSMPVRNANHSIHSYGNGNEKQEILFIEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+L IPFLH EEE + N+++ LP F F ++ N
Sbjct: 213 EALYEASRNLIDLLIPFLHAEEEDMNFKENENRWNLPPFSFQDKFTN 259
[87][TOP]
>UniRef100_Q8SKY1 DNA-directed RNA polymerase subunit alpha n=2 Tax=Cuscuta reflexa
RepID=RPOA_CUSRE
Length = 335
Score = 151 bits (382), Expect = 2e-35
Identities = 74/108 (68%), Positives = 87/108 (80%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RN GY +K NFED SYPIDA+FMPV NANHSI+SYGN EKQEILFLEIWTNGSLTPK
Sbjct: 153 RNHGYFIKTHANFEDGSYPIDALFMPVRNANHSINSYGN--EKQEILFLEIWTNGSLTPK 210
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+ASRNLI+LFIPFLH+EEE +LE+ H + L F ++++ L
Sbjct: 211 EALHEASRNLIDLFIPFLHMEEENLHLEDADHTIPLSPFTVYDKVAKL 258
[88][TOP]
>UniRef100_P60314 DNA-directed RNA polymerase subunit alpha n=1 Tax=Amborella
trichopoda RepID=RPOA_AMBTC
Length = 334
Score = 150 bits (378), Expect = 6e-35
Identities = 73/105 (69%), Positives = 85/105 (80%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY + +N +D SYPIDAV MPV NAN+SI YGN NEKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYRTRTTN--QDASYPIDAVSMPVRNANYSIQCYGNENEKQEILFLEIWTNGSLTPK 210
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRL 12
EAL++ASRNLI+LFIPFLH EE +L+++Q+ T PFFPFH L
Sbjct: 211 EALYEASRNLIDLFIPFLHAEERDLHLDDDQNIFTAPFFPFHEGL 255
[89][TOP]
>UniRef100_P93993 DNA-directed RNA polymerase subunit alpha n=1 Tax=Australopyrum
velutinum RepID=RPOA_AUSVE
Length = 339
Score = 149 bits (376), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVXMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[90][TOP]
>UniRef100_Q539W2 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys lanuginosa
RepID=Q539W2_9POAL
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[91][TOP]
>UniRef100_Q539W0 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys fragilis
subsp. secaliformis RepID=Q539W0_PSAFR
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[92][TOP]
>UniRef100_Q539V6 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys caduca
RepID=Q539V6_9POAL
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[93][TOP]
>UniRef100_Q539V4 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys caduca
RepID=Q539V4_9POAL
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[94][TOP]
>UniRef100_Q3Y512 RNA polymerase subunit a n=1 Tax=Elymus dentatus RepID=Q3Y512_9POAL
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[95][TOP]
>UniRef100_B8Y305 RNA polymerase alpha subunit n=1 Tax=Festuca arundinacea
RepID=B8Y305_FESAR
Length = 346
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 158 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 217
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 218 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 265
[96][TOP]
>UniRef100_P93964 DNA-directed RNA polymerase subunit alpha n=1 Tax=Secale strictum
RepID=RPOA_SECST
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGASFEENKNRFTPPLFTFQKRLTNL 260
[97][TOP]
>UniRef100_P93960 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psathyrostachys
rupestris RepID=RPOA_PSARU
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[98][TOP]
>UniRef100_Q7H6F6 DNA-directed RNA polymerase subunit alpha n=9 Tax=Triticeae
RepID=RPOA_PSAJU
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[99][TOP]
>UniRef100_P92418 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psathyrostachys
fragilis RepID=RPOA_PSAFR
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[100][TOP]
>UniRef100_A8Y9B8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lolium perenne
RepID=RPOA_LOLPR
Length = 341
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[101][TOP]
>UniRef100_Q7H6J2 DNA-directed RNA polymerase subunit alpha n=8 Tax=Hordeum
RepID=RPOA_HORBU
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[102][TOP]
>UniRef100_P93956 DNA-directed RNA polymerase subunit alpha n=2 Tax=Triticeae
RepID=RPOA_FESSE
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[103][TOP]
>UniRef100_Q8MAI9 DNA-directed RNA polymerase subunit alpha n=1 Tax=Leymus
californicus RepID=RPOA_ELYCL
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[104][TOP]
>UniRef100_Q7H6I5 DNA-directed RNA polymerase subunit alpha n=22 Tax=Triticeae
RepID=RPOA_ELYCA
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[105][TOP]
>UniRef100_P92225 DNA-directed RNA polymerase subunit alpha n=1 Tax=Crithopsis
delileana RepID=RPOA_CRIDE
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGASFEENKNRFTPPLFTFQKRLTNL 260
[106][TOP]
>UniRef100_A1EA40 DNA-directed RNA polymerase subunit alpha n=1 Tax=Agrostis
stolonifera RepID=RPOA_AGRST
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[107][TOP]
>UniRef100_P92209 DNA-directed RNA polymerase subunit alpha n=3 Tax=Agropyron
RepID=RPOA_AGRCR
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[108][TOP]
>UniRef100_Q8MAJ0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aegilops
uniaristata RepID=RPOA_AEGUN
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGASFEENKNRFTPPLFTFQKRLTNL 260
[109][TOP]
>UniRef100_P92429 DNA-directed RNA polymerase subunit alpha n=1 Tax=Aegilops tauschii
RepID=RPOA_AEGTA
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[110][TOP]
>UniRef100_Q7GED9 DNA-directed RNA polymerase subunit alpha n=9 Tax=Triticeae
RepID=RPOA_AEGCM
Length = 339
Score = 149 bits (375), Expect = 1e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGASFEENKNRFTPPLFTFQKRLTNL 260
[111][TOP]
>UniRef100_P92389 DNA-directed RNA polymerase subunit alpha n=1 Tax=Heteranthelium
piliferum RepID=RPOA_HETPI
Length = 339
Score = 148 bits (374), Expect = 2e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELIKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[112][TOP]
>UniRef100_P93968 DNA-directed RNA polymerase subunit alpha n=1 Tax=Festucopsis
festucoides RepID=RPOA_FESFE
Length = 339
Score = 148 bits (374), Expect = 2e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNLNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[113][TOP]
>UniRef100_P93974 DNA-directed RNA polymerase subunit alpha n=2 Tax=Eremopyrum
RepID=RPOA_EREDI
Length = 339
Score = 148 bits (374), Expect = 2e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFKKRLTNL 260
[114][TOP]
>UniRef100_P92220 DNA-directed RNA polymerase subunit alpha n=1 Tax=Bromus inermis
RepID=RPOA_BROIN
Length = 339
Score = 148 bits (374), Expect = 2e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFKKRLTNL 260
[115][TOP]
>UniRef100_Q7H6H4 RNA polymerase alpha subunit n=1 Tax=Elymus virginicus
RepID=Q7H6H4_9POAL
Length = 339
Score = 147 bits (371), Expect = 4e-34
Identities = 70/107 (65%), Positives = 83/107 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL N
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTN 259
[116][TOP]
>UniRef100_P92439 DNA-directed RNA polymerase subunit alpha n=3 Tax=Thinopyrum
RepID=RPOA_THIBE
Length = 339
Score = 147 bits (371), Expect = 4e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPPFTFQKRLTNL 260
[117][TOP]
>UniRef100_B3TN81 RNA polymerase alpha subunit (Fragment) n=1 Tax=Brachypodium
distachyon RepID=B3TN81_BRADI
Length = 338
Score = 147 bits (370), Expect = 5e-34
Identities = 70/107 (65%), Positives = 83/107 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL N
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTGFEENKNRFTPPLFTFQKRLTN 259
[118][TOP]
>UniRef100_Q8MAI6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Lophopyrum
elongatum RepID=RPOA_LOPEL
Length = 339
Score = 147 bits (370), Expect = 5e-34
Identities = 71/108 (65%), Positives = 84/108 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPPFTFKKRLTNL 260
[119][TOP]
>UniRef100_Q8MAI8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Elymus hystrix
RepID=RPOA_ELYHY
Length = 339
Score = 146 bits (369), Expect = 6e-34
Identities = 70/108 (64%), Positives = 83/108 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDA MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAESMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[120][TOP]
>UniRef100_C8XU47 RNA polymerase alpha subunit n=1 Tax=Coix lacryma-jobi
RepID=C8XU47_COILA
Length = 339
Score = 145 bits (367), Expect = 1e-33
Identities = 69/108 (63%), Positives = 83/108 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N +D SYPIDAVFMPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYHTELRKNSQDGSYPIDAVFMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PF+H EEE E N++++T P F R NL
Sbjct: 213 EALYEASRNLIDLFLPFIHTEEEGTSFEENKNRLTPPLLTFQKRFTNL 260
[121][TOP]
>UniRef100_Q6L370 DNA-directed RNA polymerase subunit alpha n=2 Tax=Saccharum
RepID=RPOA_SACHY
Length = 339
Score = 145 bits (367), Expect = 1e-33
Identities = 69/108 (63%), Positives = 83/108 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N +D SYPIDAVFMPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYHTELRKNSQDGSYPIDAVFMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PF+H EEE E N++++T P F R NL
Sbjct: 213 EALYEASRNLIDLFLPFIHTEEEGTSFEENKNRLTPPLLTFQKRFTNL 260
[122][TOP]
>UniRef100_Q49C94 RpoA n=1 Tax=Cuscuta europaea RepID=Q49C94_CUSEU
Length = 329
Score = 145 bits (366), Expect = 1e-33
Identities = 70/108 (64%), Positives = 86/108 (79%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY K+ +F+D SYPIDA+FMPV+NANHSIHSYGN EKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYFNKVDLHFDDGSYPIDALFMPVQNANHSIHSYGN--EKQEILFLEIWTNGSLTPK 210
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+++R LI+ FIPF +EEE YL + +H + LP F+N++ L
Sbjct: 211 EALHESARILIDFFIPFFQMEEENLYLADAKHTIXLPPLIFYNKVTTL 258
[123][TOP]
>UniRef100_Q3Y511 RNA polymerase subunit a n=1 Tax=Elymus mutabilis
RepID=Q3Y511_9POAL
Length = 339
Score = 145 bits (366), Expect = 1e-33
Identities = 70/108 (64%), Positives = 83/108 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV MPV N N+SI S GNG EK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGIEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[124][TOP]
>UniRef100_B0FIU5 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta europaea
RepID=B0FIU5_CUSEU
Length = 329
Score = 145 bits (366), Expect = 1e-33
Identities = 70/108 (64%), Positives = 86/108 (79%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY K+ +F+D SYPIDA+FMPV+NANHSIHSYGN EKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYFNKVDLHFDDGSYPIDALFMPVQNANHSIHSYGN--EKQEILFLEIWTNGSLTPK 210
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+++R LI+ FIPF +EEE YL + +H + LP F+N++ L
Sbjct: 211 EALHESARILIDFFIPFFQMEEENLYLADAKHTIPLPPLIFYNKVTTL 258
[125][TOP]
>UniRef100_B0FIU4 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta epilinum
RepID=B0FIU4_9ASTE
Length = 330
Score = 145 bits (366), Expect = 1e-33
Identities = 70/108 (64%), Positives = 85/108 (78%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY K+ +F+D YPIDA+FMPV+NANHSIHSYGN EKQEILFLEIWTNGSLTPK
Sbjct: 153 RNRGYFNKVDLHFDDGIYPIDALFMPVQNANHSIHSYGN--EKQEILFLEIWTNGSLTPK 210
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+A+R LI+ FIPF H+EEE YL + +H + L F+N++ L
Sbjct: 211 EALHEAARILIDFFIPFFHMEEENLYLADAEHTIPLSSLIFYNKVTKL 258
[126][TOP]
>UniRef100_C7SM26 RNA polymerase alpha subunit n=1 Tax=Joinvillea plicata
RepID=C7SM26_9POAL
Length = 339
Score = 144 bits (363), Expect = 3e-33
Identities = 71/108 (65%), Positives = 82/108 (75%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY + N +D SYPIDAV MPV N N+SI+S GN NEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYHTEPRKNSQDGSYPIDAVSMPVRNVNYSIYSCGNENEKYEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LFIPFLH EEE E N+++ TLP F RL NL
Sbjct: 213 EALYEASRNLIDLFIPFLHAEEEDTNFEENKNRFTLPLLTFQKRLTNL 260
[127][TOP]
>UniRef100_B2ZE98 RNA polymerase alpha subunit n=1 Tax=Phyllostachys propinqua
RepID=B2ZE98_9POAL
Length = 339
Score = 144 bits (363), Expect = 3e-33
Identities = 70/108 (64%), Positives = 82/108 (75%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N +D SYPIDAV MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYHTELRKNSQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLLTFQKRLTNL 260
[128][TOP]
>UniRef100_P93962 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psathyrostachys
stoloniformis RepID=RPOA_PSAST
Length = 339
Score = 144 bits (363), Expect = 3e-33
Identities = 69/108 (63%), Positives = 82/108 (75%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPI V MPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIXXVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNL 260
[129][TOP]
>UniRef100_P09562 DNA-directed RNA polymerase subunit alpha n=1 Tax=Zea mays
RepID=RPOA_MAIZE
Length = 339
Score = 144 bits (363), Expect = 3e-33
Identities = 69/108 (63%), Positives = 82/108 (75%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+R Y ++ N +D SYPIDAVFMPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRAYHTELRKNSQDGSYPIDAVFMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N++++T P F R NL
Sbjct: 213 EALYEASRNLIDLFLPFLHTEEEGTSFEENKNRLTPPLLTFQKRFTNL 260
[130][TOP]
>UniRef100_A1E9V6 DNA-directed RNA polymerase subunit alpha n=1 Tax=Sorghum bicolor
RepID=RPOA_SORBI
Length = 339
Score = 144 bits (362), Expect = 4e-33
Identities = 68/108 (62%), Positives = 83/108 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N +D SYPIDAVFMPV N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYHTELRKNSQDGSYPIDAVFMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PF+H EEE E +++++T P F R NL
Sbjct: 213 EALYEASRNLIDLFLPFIHTEEEGTSFEESKNRLTPPLLTFQKRFTNL 260
[131][TOP]
>UniRef100_Q539W1 RNA polymerase alpha subunit n=1 Tax=Psathyrostachys lanuginosa
RepID=Q539W1_9POAL
Length = 339
Score = 143 bits (361), Expect = 5e-33
Identities = 69/108 (63%), Positives = 82/108 (75%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N++D SYPIDAV M V N N+SI S GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYQTELRKNYQDGSYPIDAVSMXVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLLTFQKRLTNL 260
[132][TOP]
>UniRef100_Q2LIP2 RNA polymerase subunit (Fragment) n=1 Tax=Oryza rhizomatis
RepID=Q2LIP2_9ORYZ
Length = 317
Score = 142 bits (357), Expect = 2e-32
Identities = 69/108 (63%), Positives = 81/108 (75%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N +D SYPIDAV MPV N N+SI S GNGN K EILFLEIWTNGSLTPK
Sbjct: 133 RDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFSCGNGNAKYEILFLEIWTNGSLTPK 192
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE + NQ++ T P F RL NL
Sbjct: 193 EALYEASRNLIDLFLPFLHTEEEGTRFQENQNRFTSPLLSFQKRLTNL 240
[133][TOP]
>UniRef100_C6GJ86 RpoA n=2 Tax=Bambuseae RepID=C6GJ86_BAMOL
Length = 339
Score = 140 bits (354), Expect = 3e-32
Identities = 68/108 (62%), Positives = 81/108 (75%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N +D SYPIDAV MPV N N+SI GNGNEK EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYHTELRKNSQDGSYPIDAVSMPVRNVNYSIFYCGNGNEKHEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE E N+++ T P F +L NL
Sbjct: 213 EALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLLTFQKKLTNL 260
[134][TOP]
>UniRef100_Q2LIP1 RNA polymerase subunit (Fragment) n=1 Tax=Oryza punctata
RepID=Q2LIP1_ORYPU
Length = 317
Score = 140 bits (353), Expect = 4e-32
Identities = 68/108 (62%), Positives = 81/108 (75%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N +D SYPIDAV MPV N N+SI S GNGN K EILFLEIWTNGSLTPK
Sbjct: 133 RDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFSCGNGNAKYEILFLEIWTNGSLTPK 192
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE + N+++ T P F RL NL
Sbjct: 193 EALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSFQKRLTNL 240
[135][TOP]
>UniRef100_Q2LIP0 RNA polymerase subunit (Fragment) n=2 Tax=Oryza RepID=Q2LIP0_9ORYZ
Length = 317
Score = 140 bits (353), Expect = 4e-32
Identities = 68/108 (62%), Positives = 81/108 (75%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N +D SYPIDAV MPV N N+SI S GNGN K EILFLEIWTNGSLTPK
Sbjct: 133 RDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFSCGNGNAKYEILFLEIWTNGSLTPK 192
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE + N+++ T P F RL NL
Sbjct: 193 EALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSFQKRLTNL 240
[136][TOP]
>UniRef100_Q2LIN9 RNA polymerase subunit (Fragment) n=1 Tax=Oryza granulata
RepID=Q2LIN9_9ORYZ
Length = 317
Score = 140 bits (353), Expect = 4e-32
Identities = 68/108 (62%), Positives = 81/108 (75%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N +D SYPIDAV MPV N N+SI S GNGN K EILFLEIWTNGSLTPK
Sbjct: 133 RDRGYHTEVRKNAQDGSYPIDAVSMPVRNVNYSIFSCGNGNAKYEILFLEIWTNGSLTPK 192
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE + N+++ T P F RL NL
Sbjct: 193 EALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSFQKRLTNL 240
[137][TOP]
>UniRef100_B7T309 RNA polymerase alpha subunit n=1 Tax=Erodium texanum
RepID=B7T309_EROTE
Length = 328
Score = 140 bits (352), Expect = 6e-32
Identities = 69/98 (70%), Positives = 81/98 (82%), Gaps = 3/98 (3%)
Frame = -3
Query: 326 RNRGYSLKM---SNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSL 156
RNRGYS+K+ +N+ +DR YPIDAVFMPV+N NHSIH+Y NG+ E+LF EIWTNGSL
Sbjct: 153 RNRGYSMKIPMPTNSHDDRGYPIDAVFMPVKNVNHSIHAYENGSH--EMLFFEIWTNGSL 210
Query: 155 TPKEALHQASRNLINLFIPFLHVEEETFYLENNQHQVT 42
TPKEAL +ASR LINLFIPFLH EEE +LENNQ+Q T
Sbjct: 211 TPKEALREASRKLINLFIPFLHAEEENSHLENNQNQHT 248
[138][TOP]
>UniRef100_UPI0000DD8D71 Os01g0789400 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000DD8D71
Length = 425
Score = 139 bits (350), Expect = 1e-31
Identities = 67/108 (62%), Positives = 81/108 (75%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N +D SYPIDAV MPV N N+SI + GNGN K EILFLEIWTNGSLTPK
Sbjct: 241 RDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPK 300
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE + N+++ T P F RL NL
Sbjct: 301 EALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSFQKRLTNL 348
[139][TOP]
>UniRef100_Q8S1Q6 Chloroplast RNA polymerase alpha chain n=1 Tax=Oryza sativa
Japonica Group RepID=Q8S1Q6_ORYSJ
Length = 337
Score = 139 bits (350), Expect = 1e-31
Identities = 67/108 (62%), Positives = 81/108 (75%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N +D SYPIDAV MPV N N+SI + GNGN K EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE + N+++ T P F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSFQKRLTNL 260
[140][TOP]
>UniRef100_Q7DNA8 OSJNBa0061C08.8 protein n=2 Tax=Oryza sativa RepID=Q7DNA8_ORYSJ
Length = 446
Score = 139 bits (350), Expect = 1e-31
Identities = 67/108 (62%), Positives = 81/108 (75%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N +D SYPIDAV MPV N N+SI + GNGN K EILFLEIWTNGSLTPK
Sbjct: 262 RDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPK 321
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE + N+++ T P F RL NL
Sbjct: 322 EALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSFQKRLTNL 369
[141][TOP]
>UniRef100_Q2LIP7 RNA polymerase subunit (Fragment) n=1 Tax=Oryza sativa
RepID=Q2LIP7_ORYSA
Length = 317
Score = 139 bits (350), Expect = 1e-31
Identities = 67/108 (62%), Positives = 81/108 (75%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N +D SYPIDAV MPV N N+SI + GNGN K EILFLEIWTNGSLTPK
Sbjct: 133 RDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPK 192
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE + N+++ T P F RL NL
Sbjct: 193 EALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSFQKRLTNL 240
[142][TOP]
>UniRef100_B7T379 RNA polymerase alpha subunit n=1 Tax=Geranium carolinianum
RepID=B7T379_9ROSI
Length = 329
Score = 139 bits (350), Expect = 1e-31
Identities = 71/98 (72%), Positives = 80/98 (81%), Gaps = 3/98 (3%)
Frame = -3
Query: 326 RNRGYSLK--MSNNF-EDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSL 156
RNRGYS K M NF +DR YPIDAVF+PV+N NHSIHSY NG+ E+LFLEIWTNGSL
Sbjct: 153 RNRGYSRKIPMPTNFHDDRGYPIDAVFLPVKNVNHSIHSYENGSH--EMLFLEIWTNGSL 210
Query: 155 TPKEALHQASRNLINLFIPFLHVEEETFYLENNQHQVT 42
TPKEAL +ASR LINLFIPFLH EEE F+ ENNQ++ T
Sbjct: 211 TPKEALREASRKLINLFIPFLHAEEENFHFENNQNEHT 248
[143][TOP]
>UniRef100_P0C500 DNA-directed RNA polymerase subunit alpha n=7 Tax=Oryza
RepID=RPOA_ORYSJ
Length = 337
Score = 139 bits (350), Expect = 1e-31
Identities = 67/108 (62%), Positives = 81/108 (75%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N +D SYPIDAV MPV N N+SI + GNGN K EILFLEIWTNGSLTPK
Sbjct: 153 RDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE + N+++ T P F RL NL
Sbjct: 213 EALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSFQKRLTNL 260
[144][TOP]
>UniRef100_Q7G6A7 DNA-directed RNA polymerase alpha chain, putative, expressed n=2
Tax=Oryza sativa RepID=Q7G6A7_ORYSJ
Length = 446
Score = 138 bits (347), Expect = 2e-31
Identities = 66/108 (61%), Positives = 81/108 (75%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N +D SYPIDAV MPV N N+SI + GNGN + EILFLEIWTNGSLTPK
Sbjct: 262 RDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNARYEILFLEIWTNGSLTPK 321
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE + N+++ T P F RL NL
Sbjct: 322 EALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSFQKRLTNL 369
[145][TOP]
>UniRef100_Q2LIP5 RNA polymerase subunit (Fragment) n=1 Tax=Oryza glumipatula
RepID=Q2LIP5_9ORYZ
Length = 317
Score = 137 bits (344), Expect = 5e-31
Identities = 66/108 (61%), Positives = 80/108 (74%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N +D SYPIDAV MPV N N+SI + GNGN K EILFLEIWTNGSLTP
Sbjct: 133 RDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPM 192
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EAL++ASRNLI+LF+PFLH EEE + N+++ T P F RL NL
Sbjct: 193 EALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSFQKRLTNL 240
[146][TOP]
>UniRef100_A6H5L3 DNA-directed RNA polymerase subunit alpha n=2 Tax=Cycas
RepID=RPOA_CYCTA
Length = 340
Score = 137 bits (344), Expect = 5e-31
Identities = 64/103 (62%), Positives = 81/103 (78%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
++RGY ++ N++D +PIDAVFMPV NAN+SIHSYGNGN+ QEILFLEIWTNGSL P+
Sbjct: 153 KDRGYRIQSPKNYQDGIFPIDAVFMPVRNANYSIHSYGNGNDIQEILFLEIWTNGSLAPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHN 18
EAL++ASRNLI+LFIPFL EE+ +NQ+ +P F F N
Sbjct: 213 EALYRASRNLIDLFIPFLRAEEQNIDGMDNQNGSNMPSFSFSN 255
[147][TOP]
>UniRef100_C3W0T7 RNA polymerase alpha subunit n=1 Tax=Cedrus deodara
RepID=C3W0T7_CEDDE
Length = 335
Score = 136 bits (343), Expect = 6e-31
Identities = 64/107 (59%), Positives = 83/107 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ +P FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNRKGSNMPPFPLSHVLTD 259
[148][TOP]
>UniRef100_C3W2E4 RNA polymerase alpha subunit n=1 Tax=Pinus peuce RepID=C3W2E4_PINPE
Length = 335
Score = 136 bits (342), Expect = 8e-31
Identities = 65/107 (60%), Positives = 83/107 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + SNN++D +PIDAVFMPV +AN+SIHSYG+GNE QE+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNKKGSNMLPFPLSHVLTD 259
[149][TOP]
>UniRef100_C3W219 RNA polymerase alpha subunit n=1 Tax=Pinus monticola
RepID=C3W219_PINMO
Length = 335
Score = 136 bits (342), Expect = 8e-31
Identities = 65/107 (60%), Positives = 83/107 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + SNN++D +PIDAVFMPV +AN+SIHSYG+GNE QE+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNKKGSNMLPFPLSHVLTD 259
[150][TOP]
>UniRef100_C3VYH6 RNA polymerase alpha subunit n=4 Tax=Strobus RepID=C3VYH6_PINST
Length = 335
Score = 136 bits (342), Expect = 8e-31
Identities = 65/107 (60%), Positives = 83/107 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + SNN++D +PIDAVFMPV +AN+SIHSYG+GNE QE+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNKKGSNMLPFPLSHVLTD 259
[151][TOP]
>UniRef100_C3VYB7 RNA polymerase alpha subunit n=1 Tax=Pinus squamata
RepID=C3VYB7_9CONI
Length = 335
Score = 136 bits (342), Expect = 8e-31
Identities = 65/107 (60%), Positives = 83/107 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + SNN++D +PIDAVFMPV +AN+SIHSYG+GNE QE+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNKKGSNMLPFPLSHVLTD 259
[152][TOP]
>UniRef100_C3TSB3 RNA polymerase alpha subunit n=1 Tax=Pinus krempfii
RepID=C3TSB3_PINKR
Length = 335
Score = 136 bits (342), Expect = 8e-31
Identities = 65/107 (60%), Positives = 83/107 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + SNN++D +PIDAVFMPV +AN+SIHSYG+GNE QE+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNKKGSNMLPFPLSHVLTD 259
[153][TOP]
>UniRef100_Q85X01 DNA-directed RNA polymerase subunit alpha n=5 Tax=Strobus
RepID=RPOA_PINKO
Length = 335
Score = 136 bits (342), Expect = 8e-31
Identities = 65/107 (60%), Positives = 83/107 (77%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + SNN++D +PIDAVFMPV +AN+SIHSYG+GNE QE+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNKKGSNMLPFPLSHVLTD 259
[154][TOP]
>UniRef100_B0FIU3 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cuscuta nitida
RepID=B0FIU3_9ASTE
Length = 339
Score = 135 bits (340), Expect = 1e-30
Identities = 65/108 (60%), Positives = 85/108 (78%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RNRGY +K F++ +Y +DAVFMPV N NHSI+SYGN EK+EILFLEIWTNGSLTPK
Sbjct: 153 RNRGYLIKAHPPFQNETYSLDAVFMPVLNVNHSIYSYGN--EKKEILFLEIWTNGSLTPK 210
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+A++NL++LFIPFL +EEE LE+ +HQ+ F F++++ L
Sbjct: 211 EALHEAAQNLMDLFIPFLQMEEENLNLEDAEHQIPFSPFTFYDKVSKL 258
[155][TOP]
>UniRef100_C1IXV8 RNA polymerase alpha subunit n=1 Tax=Pinus gerardiana
RepID=C1IXV8_PINGE
Length = 335
Score = 134 bits (338), Expect = 2e-30
Identities = 64/107 (59%), Positives = 82/107 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + SNN++D +PIDAVFMPV + N+SIHSYG+GNE QE+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSSNNYQDGIFPIDAVFMPVRDVNYSIHSYGSGNEIQEVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNKKGSNMLPFPLSHVLTD 259
[156][TOP]
>UniRef100_B7T2T8 RNA polymerase alpha subunit n=1 Tax=Erodium chrysanthum
RepID=B7T2T8_9ROSI
Length = 329
Score = 134 bits (338), Expect = 2e-30
Identities = 66/96 (68%), Positives = 79/96 (82%), Gaps = 3/96 (3%)
Frame = -3
Query: 326 RNRGYSLKM---SNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSL 156
RNRGYSL++ +N+ ++R YPIDAVFMPV+N NHSIHSY NG+ E+LF EIWTNGSL
Sbjct: 153 RNRGYSLRIPTPNNSHDERGYPIDAVFMPVKNVNHSIHSYENGSH--EMLFFEIWTNGSL 210
Query: 155 TPKEALHQASRNLINLFIPFLHVEEETFYLENNQHQ 48
TPKEAL +ASR LINLFIPFLH EEE + ENNQ++
Sbjct: 211 TPKEALREASRKLINLFIPFLHAEEEKPHFENNQNE 246
[157][TOP]
>UniRef100_C3W1N1 RNA polymerase alpha subunit n=1 Tax=Larix occidentalis
RepID=C3W1N1_LAROX
Length = 335
Score = 134 bits (337), Expect = 3e-30
Identities = 63/107 (58%), Positives = 82/107 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+L IPFLH EE+ NN+ +P FP + L +
Sbjct: 213 EALYEASRNLIDLLIPFLHGEEQNIDGMNNRKGSNMPPFPLSHVLTD 259
[158][TOP]
>UniRef100_C3VZR7 RNA polymerase alpha subunit n=1 Tax=Pinus aristata
RepID=C3VZR7_9CONI
Length = 335
Score = 134 bits (336), Expect = 4e-30
Identities = 64/107 (59%), Positives = 82/107 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + SNN++D +PIDAVFMPV +AN+SIHSYG+GNE QE+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ N + + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNKKKGSNMLPFPLSHVLTD 259
[159][TOP]
>UniRef100_C3VZJ9 RNA polymerase alpha subunit n=1 Tax=Pinus albicaulis
RepID=C3VZJ9_9CONI
Length = 335
Score = 134 bits (336), Expect = 4e-30
Identities = 64/107 (59%), Positives = 82/107 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + SNN++D +PIDAVFMPV +AN+SIHSYG+GNE QE+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ N + + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNKKKGSNMLPFPLSHVLTD 259
[160][TOP]
>UniRef100_C3VXZ8 RNA polymerase alpha subunit n=1 Tax=Pinus rzedowskii
RepID=C3VXZ8_PINRZ
Length = 335
Score = 134 bits (336), Expect = 4e-30
Identities = 64/107 (59%), Positives = 82/107 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + SNN++D +PIDAVFMPV +AN+SIHSYG+GNE QE+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSSNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIQEVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ N + + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNKKKGSNMLPFPLSHVLTD 259
[161][TOP]
>UniRef100_C3W150 RNA polymerase alpha subunit n=1 Tax=Pinus leiophylla var.
chihuahuana RepID=C3W150_PINLE
Length = 335
Score = 133 bits (334), Expect = 7e-30
Identities = 63/107 (58%), Positives = 82/107 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNKKGSNMLPFPLSHLLTD 259
[162][TOP]
>UniRef100_C3W0G5 RNA polymerase alpha subunit n=1 Tax=Pinus banksiana
RepID=C3W0G5_PINBN
Length = 335
Score = 133 bits (334), Expect = 7e-30
Identities = 63/107 (58%), Positives = 82/107 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNKKGSNMLPFPLSHLLTD 259
[163][TOP]
>UniRef100_C3VZ24 RNA polymerase alpha subunit n=2 Tax=Pinus torreyana
RepID=C3VZ24_PINTO
Length = 335
Score = 133 bits (334), Expect = 7e-30
Identities = 63/107 (58%), Positives = 82/107 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNKKGSNMLPFPLSHLLTD 259
[164][TOP]
>UniRef100_C3VYP0 RNA polymerase alpha subunit n=1 Tax=Pinus taeda RepID=C3VYP0_PINTA
Length = 335
Score = 133 bits (334), Expect = 7e-30
Identities = 63/107 (58%), Positives = 82/107 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNKKGSNMLPFPLSHLLTD 259
[165][TOP]
>UniRef100_C3VXH3 RNA polymerase alpha subunit n=2 Tax=Pinus RepID=C3VXH3_PINPO
Length = 335
Score = 133 bits (334), Expect = 7e-30
Identities = 63/107 (58%), Positives = 82/107 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNKKGSNMLPFPLSHLLTD 259
[166][TOP]
>UniRef100_C1IXP0 RNA polymerase alpha subunit n=1 Tax=Pinus contorta
RepID=C1IXP0_PINCO
Length = 335
Score = 133 bits (334), Expect = 7e-30
Identities = 63/107 (58%), Positives = 82/107 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNKKGSNMLPFPLSHLLTD 259
[167][TOP]
>UniRef100_C3W2L0 RNA polymerase alpha subunit n=1 Tax=Pinus pinaster
RepID=C3W2L0_PINPS
Length = 335
Score = 132 bits (333), Expect = 9e-30
Identities = 63/107 (58%), Positives = 82/107 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNKKGSNMLPFPLSHVLTD 259
[168][TOP]
>UniRef100_C3W1V8 RNA polymerase alpha subunit n=1 Tax=Pinus merkusii
RepID=C3W1V8_9CONI
Length = 335
Score = 132 bits (333), Expect = 9e-30
Identities = 63/107 (58%), Positives = 82/107 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNKKGSNMLPFPLSHVLTD 259
[169][TOP]
>UniRef100_C3VXT2 RNA polymerase alpha subunit n=1 Tax=Pinus resinosa
RepID=C3VXT2_PINRE
Length = 335
Score = 132 bits (333), Expect = 9e-30
Identities = 63/107 (58%), Positives = 82/107 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNKKGSNMLPFPLSHVLTD 259
[170][TOP]
>UniRef100_P41629 DNA-directed RNA polymerase subunit alpha n=2 Tax=Pinus thunbergii
RepID=RPOA_PINTH
Length = 335
Score = 132 bits (333), Expect = 9e-30
Identities = 63/107 (58%), Positives = 82/107 (76%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNKKGSNMLPFPLSHVLTD 259
[171][TOP]
>UniRef100_C1IXH8 RNA polymerase alpha subunit n=1 Tax=Picea sitchensis
RepID=C1IXH8_PICSI
Length = 336
Score = 131 bits (330), Expect = 2e-29
Identities = 63/107 (58%), Positives = 80/107 (74%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL +ASR LI LFIPFLH EE+ NN+ +P FP + L +
Sbjct: 213 EALSEASRILIELFIPFLHGEEQNIDGMNNRKGSNMPPFPLSHVLTD 259
[172][TOP]
>UniRef100_C3W0M8 RNA polymerase alpha subunit n=1 Tax=Pinus canariensis
RepID=C3W0M8_9CONI
Length = 335
Score = 131 bits (329), Expect = 3e-29
Identities = 62/107 (57%), Positives = 81/107 (75%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + NN++D +PIDAVFMPV + N+SIHSYG+GNE +E+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSPNNYQDGIFPIDAVFMPVRDVNYSIHSYGSGNEIREVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
EAL++ASRNLI+LFIPFLH EE+ NN+ + FP + L +
Sbjct: 213 EALYEASRNLIDLFIPFLHGEEQNIDGMNNKKGSNMLPFPLSHVLTD 259
[173][TOP]
>UniRef100_A9QC21 RNA polymerase alpha subunit (Fragment) n=1 Tax=Scaevola aemula
RepID=A9QC21_9ASTR
Length = 332
Score = 131 bits (329), Expect = 3e-29
Identities = 69/108 (63%), Positives = 80/108 (74%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NR LK N F+D SY I AV MPV + N+SIHS GNG KQEILFLEIWTNGSLTPK
Sbjct: 153 KNRFIQLKERNTFQDGSYAIGAVLMPVRHMNYSIHSSGNG--KQEILFLEIWTNGSLTPK 210
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVNL 3
EALH+A RNLI+LFIPFLH EE LENNQ ++ P F F+++L L
Sbjct: 211 EALHEACRNLIDLFIPFLHKEEGN--LENNQDRIPFPSFTFYDKLSKL 256
[174][TOP]
>UniRef100_B7ZIR8 RNA polymerase alpha chain n=1 Tax=Keteleeria davidiana
RepID=B7ZIR8_KETDA
Length = 336
Score = 130 bits (328), Expect = 4e-29
Identities = 61/101 (60%), Positives = 79/101 (78%), Gaps = 1/101 (0%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETF-YLENNQHQVTLPFFP 27
EAL++ASRNLI+ FIPFLH EE+ + N + +P FP
Sbjct: 213 EALYEASRNLIDFFIPFLHGEEQNIDGINNRKGSSNMPPFP 253
[175][TOP]
>UniRef100_C3VZD6 RNA polymerase alpha subunit n=1 Tax=Abies firma RepID=C3VZD6_ABIFI
Length = 336
Score = 130 bits (326), Expect = 6e-29
Identities = 61/101 (60%), Positives = 79/101 (78%), Gaps = 1/101 (0%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+NRGY + NN++D +PIDAVFMPV +AN+SIHSYG+GNE +E+LFLEIWTNG LTP+
Sbjct: 153 KNRGYIIHSPNNYQDGIFPIDAVFMPVRDANYSIHSYGSGNEIREVLFLEIWTNGGLTPR 212
Query: 146 EALHQASRNLINLFIPFLHVEEETF-YLENNQHQVTLPFFP 27
EAL++ASRNLI+L IPFLH EE+ + N + +P FP
Sbjct: 213 EALYEASRNLIDLLIPFLHGEEQNIDGMNNRKGSSNMPPFP 253
[176][TOP]
>UniRef100_B7T3M1 RNA polymerase alpha subunit n=1 Tax=Geranium palmatum
RepID=B7T3M1_9ROSI
Length = 329
Score = 129 bits (325), Expect = 8e-29
Identities = 64/98 (65%), Positives = 77/98 (78%), Gaps = 3/98 (3%)
Frame = -3
Query: 326 RNRGYSLK---MSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSL 156
RNRGY ++ ++N +DR YPID+VFMPV+N NHSIHSY NG +LFLEIWTNGSL
Sbjct: 153 RNRGYFIQIPMLTNLHDDRGYPIDSVFMPVKNVNHSIHSYENGIHA--MLFLEIWTNGSL 210
Query: 155 TPKEALHQASRNLINLFIPFLHVEEETFYLENNQHQVT 42
TPKEAL +ASR L NLFIPFLH EE+ F+ ENNQ++ T
Sbjct: 211 TPKEALREASRKLSNLFIPFLHAEEQNFHFENNQNEHT 248
[177][TOP]
>UniRef100_B7T3F0 RNA polymerase alpha subunit n=1 Tax=Geranium macrorrhizum
RepID=B7T3F0_9ROSI
Length = 329
Score = 129 bits (325), Expect = 8e-29
Identities = 66/98 (67%), Positives = 76/98 (77%), Gaps = 3/98 (3%)
Frame = -3
Query: 326 RNRGYSLK---MSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSL 156
RNRGY ++ +SN +DR YPIDAVFMPV+N NHSIHSY NG +LFLEIWTNGSL
Sbjct: 153 RNRGYFIQIPMLSNLHDDRGYPIDAVFMPVKNVNHSIHSYENGIHA--MLFLEIWTNGSL 210
Query: 155 TPKEALHQASRNLINLFIPFLHVEEETFYLENNQHQVT 42
TPKEAL ASR LINLFIPFLH EE+ + ENNQ++ T
Sbjct: 211 TPKEALRGASRKLINLFIPFLHAEEQNCHFENNQNEHT 248
[178][TOP]
>UniRef100_B7T3U2 RNA polymerase alpha subunit n=1 Tax=Monsonia speciosa
RepID=B7T3U2_9ROSI
Length = 331
Score = 127 bits (318), Expect = 5e-28
Identities = 67/100 (67%), Positives = 76/100 (76%), Gaps = 5/100 (5%)
Frame = -3
Query: 326 RNRGYSLKMSNNFE----DRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGS 159
R RGYS+K+ + D +YPIDAVFMPV N NHSIHSY G+ E+LFLEIWTNGS
Sbjct: 153 RGRGYSIKIPMPTDLFHHDSAYPIDAVFMPVRNVNHSIHSYERGSH--EMLFLEIWTNGS 210
Query: 158 LTPKEALHQASRNLINLFIPFLHVEEETFYL-ENNQHQVT 42
LTPKEAL +ASR LINL +PFLH EEE FYL ENNQ+Q T
Sbjct: 211 LTPKEALREASRKLINLLMPFLHAEEENFYLVENNQNQDT 250
[179][TOP]
>UniRef100_B7T413 RNA polymerase alpha subunit n=1 Tax=Monsonia vanderietiae
RepID=B7T413_9ROSI
Length = 333
Score = 126 bits (316), Expect = 9e-28
Identities = 71/102 (69%), Positives = 79/102 (77%), Gaps = 7/102 (6%)
Frame = -3
Query: 326 RNRGYSLKM---SNNFE-DRSYPI--DAVFMPVENANHSIHSYGNGNEKQEILFLEIWTN 165
R RGYS+K+ +N F D YPI DAVFMPV N NHSI+SY G+ +EILFLEIWTN
Sbjct: 153 RGRGYSIKIPMPTNPFHHDSGYPIPIDAVFMPVRNVNHSIYSYKRGS--REILFLEIWTN 210
Query: 164 GSLTPKEALHQASRNLINLFIPFLHVEEETFY-LENNQHQVT 42
GSLTPKEAL +ASR LINLFIPFLH EEE FY LENNQ+Q T
Sbjct: 211 GSLTPKEALREASRKLINLFIPFLHAEEENFYLLENNQNQHT 252
[180][TOP]
>UniRef100_UPI0000E123FA Os05g0292500 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000E123FA
Length = 351
Score = 124 bits (312), Expect = 3e-27
Identities = 59/83 (71%), Positives = 69/83 (83%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+RGY ++ N +D SYPIDAV MPV N N+SI + GNGN K EILFLEIWTNGSLTPK
Sbjct: 262 RDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPK 321
Query: 146 EALHQASRNLINLFIPFLHVEEE 78
EAL++ASRNLI+LF+PFLH EEE
Sbjct: 322 EALYEASRNLIDLFLPFLHTEEE 344
[181][TOP]
>UniRef100_Q4FGA3 RNA polymerase alpha chain (Fragment) n=1 Tax=Ginkgo biloba
RepID=Q4FGA3_GINBI
Length = 337
Score = 122 bits (306), Expect = 1e-26
Identities = 59/101 (58%), Positives = 73/101 (72%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
++RGY ++ NN D + DAV MPV NAN+SIHSYGNGNE QEILF EIWTNGSL P
Sbjct: 153 KDRGYRIQSPNNSRDGIFSTDAVSMPVRNANYSIHSYGNGNEMQEILFSEIWTNGSLAPG 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPF 24
EAL++ASRNLI+LFIPF+ EE+ +N + + FPF
Sbjct: 213 EALYEASRNLIDLFIPFMRAEEQNIDGIDNWNGYNMSLFPF 253
[182][TOP]
>UniRef100_Q60F88 DNA-directed RNA polymerase subunit alpha n=1 Tax=Takakia
lepidozioides RepID=RPOA_TAKLE
Length = 341
Score = 120 bits (302), Expect = 4e-26
Identities = 56/97 (57%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
Frame = -3
Query: 317 GYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL 138
GY ++ D ++P+DAVFMP+ N N+S+HS+ NGNE QEILFLEIWTNGS+TPKEAL
Sbjct: 156 GYRIEDPIKSADGNFPVDAVFMPIRNVNYSVHSFENGNETQEILFLEIWTNGSVTPKEAL 215
Query: 137 HQASRNLINLFIPFLHVEEETF-YLENNQHQVTLPFF 30
++ASR+LINLFIPFLH E++ F Y N ++ + +F
Sbjct: 216 YEASRSLINLFIPFLHAEKKEFIYGLKNTYESNMSYF 252
[183][TOP]
>UniRef100_A2T365 DNA-directed RNA polymerase subunit alpha n=1 Tax=Angiopteris
evecta RepID=RPOA_ANGEV
Length = 341
Score = 113 bits (283), Expect = 6e-24
Identities = 51/91 (56%), Positives = 71/91 (78%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
++RGY ++ S + + IDAVFMP+ AN+S+HS+GN + QEILF+EIWT+GSLTPK
Sbjct: 153 KDRGYRIQDSKESQAGEFFIDAVFMPIRKANYSVHSFGNNKKFQEILFIEIWTDGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQ 54
EAL++ASRNLI+LF+PFLH EEE + ++
Sbjct: 213 EALYEASRNLIDLFLPFLHTEEEEIISDRDE 243
[184][TOP]
>UniRef100_Q5EFY8 RNA polymerase alpha subunit n=1 Tax=Oedipodium griffithianum
RepID=Q5EFY8_9BRYO
Length = 340
Score = 113 bits (282), Expect = 8e-24
Identities = 53/98 (54%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
Frame = -3
Query: 317 GYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL 138
GY ++ S D +PIDA+FMP+ NAN+S+HS+ + N+ QEILF+EIWTNGS+TPKEAL
Sbjct: 156 GYRIQDSIKSTDGHFPIDAIFMPIRNANYSVHSFEHENKTQEILFIEIWTNGSITPKEAL 215
Query: 137 HQASRNLINLFIPFLHVEEETFY--LENNQHQVTLPFF 30
++ASR+LI+LFIPFLH E++ LEN + +F
Sbjct: 216 YEASRSLIDLFIPFLHAEKKEIINGLENKYESNNMSYF 253
[185][TOP]
>UniRef100_Q5EG69 RNA polymerase alpha subunit n=1 Tax=Sphagnum fimbriatum
RepID=Q5EG69_9BRYO
Length = 338
Score = 110 bits (276), Expect = 4e-23
Identities = 54/103 (52%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Frame = -3
Query: 317 GYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL 138
GY + S D + +DAVF P+ NAN+S+HS+ N NE QEILF+EIWTNGS+TPKEAL
Sbjct: 159 GYRTQDSIKSADGYFSVDAVFTPIRNANYSVHSFENKNETQEILFIEIWTNGSVTPKEAL 218
Query: 137 HQASRNLINLFIPFLHVE-EETFYLENNQHQVTLPFFPFHNRL 12
++ASR+LI+LFIPFLH E EE + +N + + P N++
Sbjct: 219 YEASRSLIDLFIPFLHAEKEEVMHDKNESNTLHFSSSPSENKM 261
[186][TOP]
>UniRef100_Q5EFY2 RNA polymerase alpha subunit n=1 Tax=Polytrichum pallidisetum
RepID=Q5EFY2_9BRYO
Length = 338
Score = 110 bits (276), Expect = 4e-23
Identities = 50/80 (62%), Positives = 67/80 (83%)
Frame = -3
Query: 317 GYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL 138
GY ++ S D +PIDA+FMP+ NAN+S+HS+ N N+ QEILF+EIWTNGS+TPKEAL
Sbjct: 156 GYRIQDSVKSIDGYFPIDAIFMPIRNANYSVHSFENNNKIQEILFIEIWTNGSITPKEAL 215
Query: 137 HQASRNLINLFIPFLHVEEE 78
++ASR+LI+LFIPFLH E++
Sbjct: 216 YEASRSLIDLFIPFLHPEKK 235
[187][TOP]
>UniRef100_P06270 DNA-directed RNA polymerase subunit alpha n=1 Tax=Marchantia
polymorpha RepID=RPOA_MARPO
Length = 340
Score = 110 bits (274), Expect = 6e-23
Identities = 51/105 (48%), Positives = 80/105 (76%), Gaps = 2/105 (1%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
++RGY ++ +++ +P+DAVFMP+ NAN+S+HS+ + + +EILFLEIWT+GSLTPK
Sbjct: 153 KDRGYRIENLQKYQEGLFPVDAVFMPIRNANYSVHSFESEKKIKEILFLEIWTDGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVE--EETFYLENNQHQVTLPFFPFHN 18
EAL++ASRNLI+LFIP ++ E E+ F +E ++ + +FPF +
Sbjct: 213 EALYEASRNLIDLFIPLINSEKKEKNFGIEKT-NESNMSYFPFQS 256
[188][TOP]
>UniRef100_Q5EFZ1 RNA polymerase alpha subunit n=1 Tax=Buxbaumia aphylla
RepID=Q5EFZ1_9BRYO
Length = 340
Score = 109 bits (273), Expect = 8e-23
Identities = 51/101 (50%), Positives = 73/101 (72%), Gaps = 2/101 (1%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
++ GY ++ SN + + IDA+FMP+ NAN+S+HS+ N N+ QE+LF+EIWTNGS+TPK
Sbjct: 153 KDYGYRIQNSNKSTNSHFFIDAIFMPIRNANYSVHSFENENKTQEMLFIEIWTNGSITPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFY--LENNQHQVTLPFF 30
+AL++ASR+LI+LFIPFLH E LEN + +F
Sbjct: 213 DALYEASRSLIDLFIPFLHAERREIINELENEYKLSNISYF 253
[189][TOP]
>UniRef100_Q60F85 DNA-dependent RNA polymerase alpha subunit n=1 Tax=Sphagnum
girgensohnii RepID=Q60F85_9BRYO
Length = 341
Score = 109 bits (272), Expect = 1e-22
Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 2/97 (2%)
Frame = -3
Query: 317 GYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL 138
GY + S D + +DAVF P+ NAN+S+HS+ N NE QEILF+EIWTNGS+TPKEAL
Sbjct: 159 GYRTQDSIKSADGYFSVDAVFTPIRNANYSVHSFENKNETQEILFIEIWTNGSVTPKEAL 218
Query: 137 HQASRNLINLFIPFLHVEEETFY--LENNQHQVTLPF 33
++ASR+LI+LFIPFLH E+E L N TL F
Sbjct: 219 YEASRSLIDLFIPFLHAEKEEVMHGLGNKNESNTLHF 255
[190][TOP]
>UniRef100_Q85A01 DNA-directed RNA polymerase subunit alpha n=1 Tax=Anthoceros
formosae RepID=RPOA_ANTFO
Length = 340
Score = 108 bits (271), Expect = 1e-22
Identities = 47/83 (56%), Positives = 67/83 (80%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
++RGY ++ +ED ++ ++A F P+ NAN+S+HS+ N EKQEILF+E+WTNGSLTPK
Sbjct: 153 KDRGYRIENPVKYEDGNFAVNAAFTPIRNANYSVHSFENEKEKQEILFIEVWTNGSLTPK 212
Query: 146 EALHQASRNLINLFIPFLHVEEE 78
EAL +AS++LINLFIP LH ++E
Sbjct: 213 EALREASQSLINLFIPLLHEKKE 235
[191][TOP]
>UniRef100_Q5EFY4 RNA polymerase alpha subunit n=1 Tax=Dendroligotrichum dendroides
RepID=Q5EFY4_9BRYO
Length = 340
Score = 107 bits (268), Expect = 3e-22
Identities = 49/80 (61%), Positives = 65/80 (81%)
Frame = -3
Query: 317 GYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL 138
GY + S D + IDA+FMP+ NAN+S+HS+ N N+ QEILF+EIWTNGS+TPKEAL
Sbjct: 156 GYRIXDSVKSIDGYFSIDAIFMPIRNANYSVHSFENNNKIQEILFIEIWTNGSITPKEAL 215
Query: 137 HQASRNLINLFIPFLHVEEE 78
++ASR+LI+LFIPFLH E++
Sbjct: 216 YEASRSLIDLFIPFLHTEKK 235
[192][TOP]
>UniRef100_B1VKC7 RNA polymerase alpha subunit n=1 Tax=Cryptomeria japonica
RepID=B1VKC7_CRYJA
Length = 342
Score = 107 bits (267), Expect = 4e-22
Identities = 54/110 (49%), Positives = 70/110 (63%), Gaps = 10/110 (9%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRS----------YPIDAVFMPVENANHSIHSYGNGNEKQEILFLE 177
+ RGY ++ NN+ + +PIDA F PV+N N+SIHSY + NE QEILFLE
Sbjct: 153 KGRGYIIQNPNNYNPKDEIFAIDAAFVFPIDAAFAPVQNVNYSIHSYWSENETQEILFLE 212
Query: 176 IWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFP 27
IWTNG L PKEAL++ASRNLI+ F+PFL+ +EE N+ P P
Sbjct: 213 IWTNGGLAPKEALYEASRNLIDFFLPFLNAKEENSDGTNSLSDDITPSLP 262
[193][TOP]
>UniRef100_B0YPQ7 RNA polymerase alpha subunit n=1 Tax=Aneura mirabilis
RepID=B0YPQ7_ANEMR
Length = 342
Score = 104 bits (259), Expect = 4e-21
Identities = 45/79 (56%), Positives = 66/79 (83%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
++RGY ++ S + + +PIDAVFMP+ NAN+S+HS+G+ + +EIL LEIWTNGSLTP+
Sbjct: 154 KDRGYRMENSRKYREGFFPIDAVFMPIRNANYSVHSFGSREKTKEILLLEIWTNGSLTPE 213
Query: 146 EALHQASRNLINLFIPFLH 90
+AL++ASRNLI+LFIP ++
Sbjct: 214 KALYEASRNLIDLFIPSMN 232
[194][TOP]
>UniRef100_A7Q481 Chromosome chr9 scaffold_49, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7Q481_VITVI
Length = 150
Score = 103 bits (258), Expect = 5e-21
Identities = 47/67 (70%), Positives = 56/67 (83%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
RN YS+K NNF+D SYPID VFM V+NANH+IH YGN NE+QEILFL++WTN +LTPK
Sbjct: 82 RNCKYSMKRPNNFQDGSYPIDTVFMSVQNANHNIHFYGNVNERQEILFLKLWTNKNLTPK 141
Query: 146 EALHQAS 126
EA H+AS
Sbjct: 142 EAFHEAS 148
[195][TOP]
>UniRef100_Q9BBN0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Marsilea
quadrifolia RepID=RPOA_MARQU
Length = 341
Score = 103 bits (257), Expect = 6e-21
Identities = 43/80 (53%), Positives = 61/80 (76%)
Frame = -3
Query: 317 GYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL 138
GY ++ N + D +P+DAVFMPV N N+S+H +G+G E +EILF+E+WTNGSLTP EA+
Sbjct: 156 GYRIESLNEYRDGEFPVDAVFMPVRNVNYSVHPFGSGKEMREILFIEVWTNGSLTPTEAI 215
Query: 137 HQASRNLINLFIPFLHVEEE 78
+AS++ I+L PFLH + E
Sbjct: 216 SKASKSSIDLLSPFLHTKHE 235
[196][TOP]
>UniRef100_C5HY86 RNA polymerase a-subunit n=1 Tax=Alsophila spinulosa
RepID=C5HY86_9FILI
Length = 338
Score = 102 bits (254), Expect = 1e-20
Identities = 45/80 (56%), Positives = 61/80 (76%)
Frame = -3
Query: 317 GYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL 138
GY ++ N + D +P+DAV MPV N N+S+H +G+G E +EI F+EIWTNGS TP EAL
Sbjct: 156 GYRIEEFNGYRDGEFPVDAVPMPVRNVNYSVHPFGSGREMREISFIEIWTNGSPTPNEAL 215
Query: 137 HQASRNLINLFIPFLHVEEE 78
+AS+NLI+L IPFLH++ E
Sbjct: 216 CEASKNLIDLLIPFLHMKHE 235
[197][TOP]
>UniRef100_Q2KKK3 RNA polymerase alpha subunit (Fragment) n=1 Tax=Polytrichadelphus
purpureus RepID=Q2KKK3_9BRYO
Length = 165
Score = 95.5 bits (236), Expect = 2e-18
Identities = 41/60 (68%), Positives = 54/60 (90%)
Frame = -3
Query: 257 FMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEE 78
FMP+ NAN+S+HS+ N N+ QEILF+EIWTNGS+TPKEAL++ASR+L +LFIPFLH E++
Sbjct: 1 FMPIRNANYSVHSFENNNKIQEILFIEIWTNGSITPKEALYEASRSLXDLFIPFLHTEKK 60
[198][TOP]
>UniRef100_Q8WHZ1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Psilotum nudum
RepID=RPOA_PSINU
Length = 340
Score = 94.7 bits (234), Expect = 3e-18
Identities = 47/100 (47%), Positives = 68/100 (68%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
R+ GY + + IDA+F P+ NAN+SIHS+ + N+ +EILFLE+WTNGSLTP
Sbjct: 153 RDCGYRTLNLKESQSGEFFIDALFTPIRNANYSIHSFESNNKVREILFLEVWTNGSLTPG 212
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFP 27
AL +ASR+LI+LFI FL++E+E E +++ + FP
Sbjct: 213 AALSEASRDLIDLFIIFLNMEKEESIKEIENNELNIKNFP 252
[199][TOP]
>UniRef100_P60315 DNA-directed RNA polymerase subunit alpha, chloroplastic n=2
Tax=Physcomitrella patens RepID=RPOA_PHYPA
Length = 450
Score = 94.4 bits (233), Expect = 4e-18
Identities = 46/81 (56%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Frame = -3
Query: 317 GYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNE-KQEILFLEIWTNGSLTPKEA 141
GY + D + ID+VFMPV NAN+S+HSY + + QEILFLEIWTNGS+TP+EA
Sbjct: 268 GYRMGDHTKSGDGRFYIDSVFMPVRNANYSVHSYESEPDVTQEILFLEIWTNGSITPEEA 327
Query: 140 LHQASRNLINLFIPFLHVEEE 78
LH+A+R LI+LF+PFLH +++
Sbjct: 328 LHEAARCLIDLFLPFLHPKKK 348
[200][TOP]
>UniRef100_Q85FJ1 DNA-directed RNA polymerase subunit alpha n=1 Tax=Adiantum
capillus-veneris RepID=RPOA_ADICA
Length = 345
Score = 90.9 bits (224), Expect = 4e-17
Identities = 47/98 (47%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Frame = -3
Query: 317 GYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL 138
GY ++ +PIDAVFMPV N N+SIH +G+G QEILF+EIWTNGSLTP EAL
Sbjct: 157 GYRIENLAKSGKGQFPIDAVFMPVRNVNYSIHLFGSGRATQEILFIEIWTNGSLTPHEAL 216
Query: 137 HQASRNLINLFIPFLHVE-EETFYLENNQHQVTLPFFP 27
+AS L++L FL+V + EN + + L P
Sbjct: 217 RKASEKLMDLLTTFLYVRGGDVSLFENGEDSLDLTKSP 254
[201][TOP]
>UniRef100_A6BM49 RNA polymerase alpha subunit n=2 Tax=Spermatophyta
RepID=A6BM49_BRANA
Length = 326
Score = 89.0 bits (219), Expect = 2e-16
Identities = 42/85 (49%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
Frame = -3
Query: 326 RNRGYSL--KMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLT 153
RN+GY++ + S ++ +PIDA MPV N N SIHSY + N+ +E+L EIWTNG LT
Sbjct: 154 RNQGYAIPSQSSRRHKNGLFPIDAPCMPVRNVNFSIHSYKSENDIREMLIFEIWTNGGLT 213
Query: 152 PKEALHQASRNLINLFIPFLHVEEE 78
P+EA ++A LI+L +P LH+EE+
Sbjct: 214 PREAFYEACWKLIDLIVPLLHMEED 238
[202][TOP]
>UniRef100_O98462 DNA-directed RNA polymerase subunit alpha n=1 Tax=Spirogyra maxima
RepID=RPOA_SPIMX
Length = 344
Score = 88.6 bits (218), Expect = 2e-16
Identities = 41/85 (48%), Positives = 60/85 (70%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+ RGY ++ N+ +D +P+DA+F PV N N SIH+ E+QE L LEIWTNG++TP
Sbjct: 155 KGRGYLIQDGNDVQDGYFPVDALFNPVRNVNFSIHNLA---EQQEALILEIWTNGAITPL 211
Query: 146 EALHQASRNLINLFIPFLHVEEETF 72
+AL Q S NLI+LF+P +E++T+
Sbjct: 212 DALRQGSENLIHLFLPPFGLEDDTY 236
[203][TOP]
>UniRef100_C5Z5P0 Putative uncharacterized protein Sb10g023655 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5Z5P0_SORBI
Length = 66
Score = 82.8 bits (203), Expect = 1e-14
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = -3
Query: 185 FLEIWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLENNQHQVTLPFFPFHNRLVN 6
FLEIWTNGSLTPKEAL++ SRNLI+LF+PF+H EEE E N++++T PF F R N
Sbjct: 7 FLEIWTNGSLTPKEALYETSRNLIDLFLPFIHTEEEGTNFEENKNRLTPPFLTFQKRFTN 66
[204][TOP]
>UniRef100_Q1ACG7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chara vulgaris
RepID=RPOA_CHAVU
Length = 358
Score = 82.4 bits (202), Expect = 1e-14
Identities = 37/76 (48%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGN-GNEKQEILFLEIWTNGSLTP 150
++ G+ L+ + S+ IDA+FMP+ N N+SIH G+ K E+L LEIWTNGS+TP
Sbjct: 150 KSMGFRLQNATQISKDSFSIDAIFMPIRNVNYSIHPVEKAGDWKSELLILEIWTNGSITP 209
Query: 149 KEALHQASRNLINLFI 102
KEA HQAS ++N+F+
Sbjct: 210 KEAFHQASEKIMNIFL 225
[205][TOP]
>UniRef100_Q5SD25 DNA-directed RNA polymerase subunit alpha n=1 Tax=Huperzia lucidula
RepID=RPOA_HUPLU
Length = 336
Score = 82.0 bits (201), Expect = 2e-14
Identities = 36/85 (42%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEK--QEILFLEIWTNGSLT 153
++ GY + ++D ++ +DAVF P+ + N+SIH + + ++ +E+L EIW+NGS+T
Sbjct: 156 KDSGYRRQNIVEYKDGNFTVDAVFTPIRSVNYSIHCFESHDKSIMKEMLLYEIWSNGSIT 215
Query: 152 PKEALHQASRNLINLFIPFLHVEEE 78
P+EA+++ASR+ INLF+PFL E+E
Sbjct: 216 PEEAIYEASRSSINLFLPFLQAEKE 240
[206][TOP]
>UniRef100_Q8M9V7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chaetosphaeridium
globosum RepID=RPOA_CHAGL
Length = 334
Score = 80.9 bits (198), Expect = 4e-14
Identities = 35/81 (43%), Positives = 55/81 (67%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+ +GYSLK + + + +D VF+P+ + N+SIHS+ + +E L +E+WTNGS+ PK
Sbjct: 153 KGKGYSLKNPISIKQGFFLVDPVFIPIRSVNYSIHSFEDEKATKEFLIVEVWTNGSIEPK 212
Query: 146 EALHQASRNLINLFIPFLHVE 84
EA+ +AS NL+NLF P + E
Sbjct: 213 EAIKEASYNLVNLFTPLVSQE 233
[207][TOP]
>UniRef100_B7ZII6 RNA polymerase alpha chain n=1 Tax=Ephedra equisetina
RepID=B7ZII6_EPHEU
Length = 258
Score = 80.5 bits (197), Expect = 5e-14
Identities = 38/91 (41%), Positives = 61/91 (67%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPK 147
+ + Y+++ +D +PID V +PV+N N SIHSY + + QE+L EIWTNG LTP+
Sbjct: 154 KKKRYTIENMKQPKDIFFPIDGVSLPVQNVNFSIHSYKSSDNIQEMLIFEIWTNGGLTPR 213
Query: 146 EALHQASRNLINLFIPFLHVEEETFYLENNQ 54
E +++A +L++L IP L VE+ ++N+Q
Sbjct: 214 ETIYEACWSLLDLIIPLLCVEQN---IKNSQ 241
[208][TOP]
>UniRef100_Q32RM8 DNA-directed RNA polymerase subunit alpha n=1 Tax=Zygnema
circumcarinatum RepID=RPOA_ZYGCR
Length = 356
Score = 80.1 bits (196), Expect = 7e-14
Identities = 42/89 (47%), Positives = 58/89 (65%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLH 90
+DA PV N N+SIHS G G+ +QE+L LE+WTNGSLTP+E + QAS+NL +L P L
Sbjct: 169 LDAALKPVRNMNYSIHSLGEGDMRQEMLVLEVWTNGSLTPQEVISQASQNLNDLLKPLLK 228
Query: 89 VEEETFYLENNQHQVTLPFFPFHNRLVNL 3
V E F + N H+ + F P + +N+
Sbjct: 229 V-ERYFQAKQNIHKKRM-FTPTQSENLNM 255
[209][TOP]
>UniRef100_C7B2H8 RNA polymerase alpha chain n=1 Tax=Selaginella moellendorffii
RepID=C7B2H8_9TRAC
Length = 247
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/81 (48%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGN--GNEKQEILFLEIWTNGSLT 153
R G+ + ++ S P DAVFMP+ +AN+SIH G+ G +E+L LE T+GS T
Sbjct: 154 RGCGFRKRNMIEYQKGSLPPDAVFMPIRHANYSIHRLGSHGGGIMKEMLLLEARTDGSPT 213
Query: 152 PKEALHQASRNLINLFIPFLH 90
P+EA+++ASRNL NLF PF H
Sbjct: 214 PREAIYEASRNLANLFSPFPH 234
[210][TOP]
>UniRef100_A9SHY0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SHY0_PHYPA
Length = 438
Score = 74.7 bits (182), Expect = 3e-12
Identities = 37/78 (47%), Positives = 55/78 (70%)
Frame = -3
Query: 317 GYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL 138
GY + + + ID+VFMPV AN+S+HS+ + +EILFLEI+TNGS++P+EAL
Sbjct: 257 GYRIVDPGKSTNGRFYIDSVFMPVVQANYSVHSFEVEDVTREILFLEIYTNGSISPEEAL 316
Query: 137 HQASRNLINLFIPFLHVE 84
+A+R+LI+L +P L E
Sbjct: 317 IEAARSLIDLLLPLLESE 334
[211][TOP]
>UniRef100_A9CP51 DNA-directed RNA polymerase alpha chain n=1 Tax=Physcomitrella
patens RepID=A9CP51_PHYPA
Length = 525
Score = 74.7 bits (182), Expect = 3e-12
Identities = 37/78 (47%), Positives = 55/78 (70%)
Frame = -3
Query: 317 GYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL 138
GY + + + ID+VFMPV AN+S+HS+ + +EILFLEI+TNGS++P+EAL
Sbjct: 344 GYRIVDPGKSTNGRFYIDSVFMPVVQANYSVHSFEVEDVTREILFLEIYTNGSISPEEAL 403
Query: 137 HQASRNLINLFIPFLHVE 84
+A+R+LI+L +P L E
Sbjct: 404 IEAARSLIDLLLPLLESE 421
[212][TOP]
>UniRef100_B9IJB3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IJB3_POPTR
Length = 73
Score = 70.1 bits (170), Expect = 7e-11
Identities = 29/46 (63%), Positives = 36/46 (78%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEI 189
RN GY +K NF+D SY IDA+FM V NANH++HSYGNGNEK ++
Sbjct: 23 RNHGYCMKPPKNFQDGSYSIDAIFMHVRNANHNVHSYGNGNEKSQL 68
[213][TOP]
>UniRef100_Q32RU7 DNA-directed RNA polymerase subunit alpha n=1 Tax=Staurastrum
punctulatum RepID=RPOA_STAPU
Length = 383
Score = 69.7 bits (169), Expect = 1e-10
Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLF----I 102
IDA F PV+ AN SIHS G+ Q++L LEIWTN +LTP EAL+QA +L+NLF
Sbjct: 179 IDANFTPVQKANFSIHSVGDPKGLQQLLLLEIWTNKTLTPAEALYQAHASLLNLFHQISP 238
Query: 101 PFLHVE 84
P LH E
Sbjct: 239 PLLHKE 244
[214][TOP]
>UniRef100_Q3ZJ77 DNA-directed RNA polymerase subunit alpha n=1 Tax=Pseudendoclonium
akinetum RepID=RPOA_PSEAK
Length = 577
Score = 68.9 bits (167), Expect = 2e-10
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = -3
Query: 275 YPIDAVFMPVENANHSIHSYGNGNEK-QEILFLEIWTNGSLTPKEALHQASRNLINLFIP 99
+PIDA+FMP+ N+ I S + K ++ + LE+WTNGS+ P+ A+H+A++ LI LF+P
Sbjct: 397 FPIDAIFMPINRVNYLIESTEDIKLKIKDRVILEVWTNGSIHPRHAIHKAAKALIQLFLP 456
Query: 98 FLHVEEETFYLENNQH 51
+ F + +N H
Sbjct: 457 LQQIRTNLFLISDNSH 472
[215][TOP]
>UniRef100_P48118 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cyanophora
paradoxa RepID=RPOA_CYAPA
Length = 315
Score = 65.1 bits (157), Expect = 2e-09
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Frame = -3
Query: 326 RNRGYSL---KMSNNFEDRSYPIDAVFMPVENANHSIHS-YGNGNEKQEILFLEIWTNGS 159
+ RGY + K + N D PIDA+FMPV N+ + + +E +E L LEIW NGS
Sbjct: 144 KGRGYKIIDKKQTENSID-FLPIDAIFMPVRKVNYMVEEIFLRNSEIKERLILEIWRNGS 202
Query: 158 LTPKEALHQASRNLINLFIPFLHVEEE 78
+TP++++ QA+ L+NLF PF + E
Sbjct: 203 VTPQDSISQAAEVLLNLFNPFKKINFE 229
[216][TOP]
>UniRef100_Q2JUJ5 DNA-directed RNA polymerase subunit alpha n=1 Tax=Synechococcus sp.
JA-3-3Ab RepID=RPOA_SYNJA
Length = 331
Score = 64.7 bits (156), Expect = 3e-09
Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSYGNGNE-KQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFL 93
ID+VFMPV N+++ + G +++ L LEIWTNGSLTP+EAL QA+R L+ LF P
Sbjct: 184 IDSVFMPVRKVNYTVEAARVGQSLEKDRLILEIWTNGSLTPQEALSQAARILVGLFSPLQ 243
Query: 92 HVEEET 75
V +T
Sbjct: 244 EVSFDT 249
[217][TOP]
>UniRef100_B1WQT5 RNA polymerase alpha subunit n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WQT5_CYAA5
Length = 314
Score = 63.2 bits (152), Expect = 9e-09
Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSY-GNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFL 93
IDAVFMPV N+S+ S G E ++ L LEIWTNGS PKEAL +A+ L++LF P
Sbjct: 166 IDAVFMPVTKVNYSVESIRGEEGEAKDRLMLEIWTNGSFNPKEALSRAADILVDLFNPLK 225
Query: 92 HVEEETFYLENNQHQVTLPFFP 27
+ NQ + +P +P
Sbjct: 226 DL---------NQLETAVPEYP 238
[218][TOP]
>UniRef100_A3IQ28 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cyanothece sp.
CCY0110 RepID=A3IQ28_9CHRO
Length = 314
Score = 63.2 bits (152), Expect = 9e-09
Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSY-GNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFL 93
IDAVFMPV N+S+ S G E ++ L LEIWTNGS PKEAL +A+ L++LF P
Sbjct: 166 IDAVFMPVTKVNYSVESIRGEEGEAKDRLMLEIWTNGSFNPKEALSRAADILVDLFNPLK 225
Query: 92 HVEEETFYLENNQHQVTLPFFP 27
+ NQ + +P +P
Sbjct: 226 DL---------NQLETAVPEYP 238
[219][TOP]
>UniRef100_A0YJS0 DNA-directed RNA polymerase alpha subunit n=1 Tax=Lyngbya sp. PCC
8106 RepID=A0YJS0_9CYAN
Length = 314
Score = 63.2 bits (152), Expect = 9e-09
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSYG-NGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFL 93
IDAVFMPV N+++ G+ +++ L L+IWTNGSLTP+EAL QA+ L++LF+P
Sbjct: 166 IDAVFMPVRKVNYTVEDARVGGSLEKDRLILDIWTNGSLTPQEALSQAATILVDLFVPLK 225
Query: 92 HVEEET 75
+ E+
Sbjct: 226 DITLES 231
[220][TOP]
>UniRef100_P49465 DNA-directed RNA polymerase subunit alpha n=1 Tax=Odontella
sinensis RepID=RPOA_ODOSI
Length = 312
Score = 63.2 bits (152), Expect = 9e-09
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHS-YGNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFL 93
IDA+FMPV+ + I + Y N N+ E LFL+IWTNGS++P+EA+ ASR +I+ F L
Sbjct: 165 IDAIFMPVQKVDFKIENIYDNSNDLTERLFLDIWTNGSMSPEEAVSSASRFIISFFSSLL 224
Query: 92 H--VEEETFYLEN 60
+ +ET EN
Sbjct: 225 ENKLPQETKESEN 237
[221][TOP]
>UniRef100_A2CI44 DNA-directed RNA polymerase subunit alpha n=1 Tax=Chlorokybus
atmophyticus RepID=RPOA_CHLAT
Length = 318
Score = 63.2 bits (152), Expect = 9e-09
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Frame = -3
Query: 320 RGYSL---KMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTP 150
+GY L + F+ PIDAVFMPV N+++ G+ QE + +E+WTNGS+
Sbjct: 151 KGYQLPDYEKKKTFQVDVLPIDAVFMPVTKVNYTVEENYGGDRSQERVIIEVWTNGSINS 210
Query: 149 KEALHQASRNLINLFIPFLHV 87
++A+ + +INLF P +V
Sbjct: 211 RQAIDLSVNKIINLFSPLQNV 231
[222][TOP]
>UniRef100_Q8DML0 DNA-directed RNA polymerase subunit alpha n=1
Tax=Thermosynechococcus elongatus BP-1 RepID=RPOA_THEEB
Length = 321
Score = 62.4 bits (150), Expect = 2e-08
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 9/74 (12%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSYGNGNEK-----QEILFLEIWTNGSLTPKEALHQASRNLINLF 105
+DAVFMPV N+++ S + + Q+ L LEIWTNGSLTP++AL+QA+ L++LF
Sbjct: 169 LDAVFMPVRRVNYTVDSVRSAGAEGDRQLQDYLKLEIWTNGSLTPQDALNQAATILVDLF 228
Query: 104 IPF----LHVEEET 75
P LH E T
Sbjct: 229 SPLKEVPLHTSEAT 242
[223][TOP]
>UniRef100_Q20F02 DNA-directed RNA polymerase subunit alpha n=1 Tax=Oltmannsiellopsis
viridis RepID=RPOA_OLTVI
Length = 508
Score = 62.4 bits (150), Expect = 2e-08
Identities = 28/75 (37%), Positives = 46/75 (61%)
Frame = -3
Query: 317 GYSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEAL 138
G + ++ P+D +FMP++ N+ I +E + LEIWTNGS+ P++A+
Sbjct: 304 GRDFSGGSQLASQALPVDTLFMPIKKVNYMI-DIDPAEPDRESVVLEIWTNGSIHPRQAV 362
Query: 137 HQASRNLINLFIPFL 93
H+A++ LI+LF PFL
Sbjct: 363 HEAAKQLIHLFSPFL 377
[224][TOP]
>UniRef100_O46914 DNA-directed RNA polymerase subunit alpha n=1 Tax=Guillardia theta
RepID=RPOA_GUITH
Length = 318
Score = 62.4 bits (150), Expect = 2e-08
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = -3
Query: 269 IDAVFMPVENANHSIH-SYGNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFL 93
+D+VFMPV+ N I + G N E L L+IWTNGS++ KEA+ A+ NLINLF P
Sbjct: 165 VDSVFMPVKKVNFRIEETRGENNILNEQLILDIWTNGSISAKEAISNAADNLINLFSPLK 224
Query: 92 HV--EEETFYLENNQHQV 45
+ E ET Y N +
Sbjct: 225 TIDGESETDYETNETSHI 242
[225][TOP]
>UniRef100_Q4C148 DNA-directed RNA polymerase n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C148_CROWT
Length = 314
Score = 62.0 bits (149), Expect = 2e-08
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSY-GNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIP 99
IDAVFMPV N+S+ S G E ++ L LEIWTNGS PKEAL +A+ L++LF P
Sbjct: 166 IDAVFMPVTKVNYSVESIRGEEGEAKDRLMLEIWTNGSFNPKEALSKAADILVDLFNP 223
[226][TOP]
>UniRef100_Q2JL74 DNA-directed RNA polymerase subunit alpha n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=RPOA_SYNJB
Length = 335
Score = 62.0 bits (149), Expect = 2e-08
Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSYGNGNE-KQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFL 93
ID+VFMPV N+++ + G +++ L LEIWTNGSLTP+EAL QA+R L+ LF P
Sbjct: 186 IDSVFMPVRKVNYAVEAARVGQFLEKDRLVLEIWTNGSLTPQEALSQAARILVGLFAPLQ 245
Query: 92 HV 87
V
Sbjct: 246 EV 247
[227][TOP]
>UniRef100_Q85FU3 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cyanidioschyzon
merolae RepID=RPOA_CYAME
Length = 316
Score = 61.2 bits (147), Expect = 3e-08
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPIDAVFMPVENANHSIH-SYGNGNEKQEILFLEIWTNGSLTP 150
++ GY L + D PID VFMPV+ N + + + + L LEIWTNGS++P
Sbjct: 153 QSSGYRLAKPSEMIDW-LPIDGVFMPVKRVNFWVDKALVDKVLVDKALHLEIWTNGSISP 211
Query: 149 KEALHQASRNLINLFIPFLHVEEETFYLENNQHQVTL 39
+EALHQA+R L + F P +E +T + +N Q L
Sbjct: 212 QEALHQAARILTHWFNPLQTLEWKTSHTKNEQTMAQL 248
[228][TOP]
>UniRef100_Q9TLV2 DNA-directed RNA polymerase subunit alpha n=1 Tax=Cyanidium
caldarium RepID=RPOA_CYACA
Length = 310
Score = 61.2 bits (147), Expect = 3e-08
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRS----YPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGS 159
++ GY K+ F +S PID++FMPV+ N+ + + E L LE+WTNGS
Sbjct: 148 KSSGY--KLVETFSKKSPLDFLPIDSIFMPVKKVNYYVEEILDSKVAYEKLILELWTNGS 205
Query: 158 LTPKEALHQASRNLINLFIP 99
L+P+++++ AS NL+ LF P
Sbjct: 206 LSPQQSINYASDNLVKLFNP 225
[229][TOP]
>UniRef100_B5YDX0 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Dictyoglomus
thermophilum H-6-12 RepID=B5YDX0_DICT6
Length = 324
Score = 60.8 bits (146), Expect = 4e-08
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 15/122 (12%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYPI-----DAVFMPVENANHSIHSYGNGNEKQ-EILFLEIWTN 165
+ +GY N +D++YPI D++F PV+ ++++ G + L LEIWTN
Sbjct: 141 KGKGYVSAEEN--KDQNYPIGVLVLDSIFSPVKKVSYTVEKTRVGRRTDLDRLILEIWTN 198
Query: 164 GSLTPKEALHQASRNLINLF---------IPFLHVEEETFYLENNQHQVTLPFFPFHNRL 12
GS++P+EA +ASR L+ F +P+ V+ E YLE + +TL R
Sbjct: 199 GSISPEEAFREASRILMEYFRLLNEKEFQLPYEEVKPENTYLEEEKKGLTLEDLGLSTRA 258
Query: 11 VN 6
N
Sbjct: 259 YN 260
[230][TOP]
>UniRef100_B0JY38 RNA polymerase alpha subunit n=1 Tax=Microcystis aeruginosa
NIES-843 RepID=B0JY38_MICAN
Length = 313
Score = 60.8 bits (146), Expect = 4e-08
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSY-GNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIP 99
ID++FMPV N+S+ + ++ L LEIWTNGS+ PKEAL QA+ L+NLF P
Sbjct: 166 IDSIFMPVTKVNYSVEDIRSESGQARDRLLLEIWTNGSINPKEALSQAADMLVNLFNP 223
[231][TOP]
>UniRef100_A8YCU3 RpoA protein n=1 Tax=Microcystis aeruginosa PCC 7806
RepID=A8YCU3_MICAE
Length = 313
Score = 60.8 bits (146), Expect = 4e-08
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSY-GNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIP 99
ID++FMPV N+S+ + ++ L LEIWTNGS+ PKEAL QA+ L+NLF P
Sbjct: 166 IDSIFMPVTKVNYSVEDIRSESGQARDRLLLEIWTNGSINPKEALSQAADMLVNLFNP 223
[232][TOP]
>UniRef100_B8HMS8 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Cyanothece sp.
PCC 7425 RepID=B8HMS8_CYAP4
Length = 314
Score = 60.5 bits (145), Expect = 6e-08
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSYGNGN-EKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFL 93
IDA+FMPV N+++ +G +++ L LEIWTNGSLTP+EAL+Q + L++LF P
Sbjct: 165 IDAIFMPVRKVNYTVEDARSGGLVEKDRLVLEIWTNGSLTPQEALNQGASILVDLFNPLK 224
Query: 92 HV 87
V
Sbjct: 225 DV 226
[233][TOP]
>UniRef100_Q6GZZ8 Putative RNA polymerase alpha subunit n=1 Tax=Fremyella diplosiphon
RepID=Q6GZZ8_FREDI
Length = 155
Score = 60.1 bits (144), Expect = 8e-08
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -3
Query: 269 IDAVFMPVENANHSIH-SYGNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFL 93
ID+VFMPV N+S+ + G+G+ ++ L LE+WTNGS++P+EAL A+ L++LF P
Sbjct: 6 IDSVFMPVRKVNYSVEEARGDGSITKDRLLLEVWTNGSISPQEALSSAAGILVDLFNPLK 65
Query: 92 HVEEE 78
+ E
Sbjct: 66 DISLE 70
[234][TOP]
>UniRef100_C7QS38 DNA-directed RNA polymerase, alpha subunit n=2 Tax=Cyanothece
RepID=C7QS38_CYAP0
Length = 316
Score = 60.1 bits (144), Expect = 8e-08
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSY-GNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIP 99
IDAVFMPV N+ + G E Q+ L LEIWTNGS PKEAL +A+ +++LF P
Sbjct: 168 IDAVFMPVTKVNYIVEDIRGEHGEAQDRLILEIWTNGSFNPKEALSEAAEIVVDLFSP 225
[235][TOP]
>UniRef100_B4VPM9 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Microcoleus
chthonoplastes PCC 7420 RepID=B4VPM9_9CYAN
Length = 315
Score = 59.7 bits (143), Expect = 1e-07
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSYG-NGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFL 93
+DAVFMPV N+S+ +G+ +++ L L++WTNGS++P+EAL QA+ L++LF P
Sbjct: 166 LDAVFMPVTKVNYSVEDTRVDGSLEKDRLILDVWTNGSVSPQEALSQAANILVDLFNPLK 225
Query: 92 HVE 84
+E
Sbjct: 226 DIE 228
[236][TOP]
>UniRef100_P73297 DNA-directed RNA polymerase subunit alpha n=1 Tax=Synechocystis sp.
PCC 6803 RepID=RPOA_SYNY3
Length = 314
Score = 59.7 bits (143), Expect = 1e-07
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSY-GNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFL 93
ID+VFMPV N+++ +G ++ L L+IWTNGS+ P+EAL +AS + NLFIP
Sbjct: 166 IDSVFMPVTKVNYTVEDIRADGMSPKDRLILDIWTNGSIQPREALSEASDIIANLFIPLK 225
Query: 92 HVEE 81
+ E
Sbjct: 226 DLNE 229
[237][TOP]
>UniRef100_Q6J224 RNA polymerase alpha subunit (Fragment) n=1 Tax=Thalassionema
frauenfeldii RepID=Q6J224_9STRA
Length = 298
Score = 59.3 bits (142), Expect = 1e-07
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Frame = -3
Query: 317 GYSL--KMSNNFEDRSYPIDAVFMPVENANHSIHS-YGNGNEKQEILFLEIWTNGSLTPK 147
GY L ++ N+ ID++FMPV+ N I + Y N E L LEIWTNGS+ P
Sbjct: 147 GYKLASQLFNDENKNFLQIDSIFMPVQKVNFKIENLYDADNSISERLILEIWTNGSIEPI 206
Query: 146 EALHQASRNLINLFIPFLHVE--EETFYLENNQHQVTL 39
EAL +A + +IN F L + +ET +N ++T+
Sbjct: 207 EALKKACKIIINCFNSLLKTQNTKETTKKTSNNRKLTI 244
[238][TOP]
>UniRef100_Q9MUV0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Mesostigma viride
RepID=RPOA_MESVI
Length = 316
Score = 59.3 bits (142), Expect = 1e-07
Identities = 28/79 (35%), Positives = 45/79 (56%)
Frame = -3
Query: 314 YSLKMSNNFEDRSYPIDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALH 135
Y++K ++ S P+DA+FMP+ N+ + E + LEIWTNGS++P++AL
Sbjct: 158 YAIKKNSYIS--SLPVDAIFMPIHKVNYMVEQDHTSKFLTERVILEIWTNGSISPRDALD 215
Query: 134 QASRNLINLFIPFLHVEEE 78
+ +I+LF P H E
Sbjct: 216 IGIKKVIDLFNPLHHCSSE 234
[239][TOP]
>UniRef100_B7KI11 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Cyanothece sp.
PCC 7424 RepID=B7KI11_CYAP7
Length = 314
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSYG-NGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFL 93
ID+VFMPV N+S+ +G ++ L LEIWTNGS+ PKEAL +A+ +++LF P
Sbjct: 166 IDSVFMPVTKVNYSVEDVRVDGTGSKDRLTLEIWTNGSINPKEALSEAAAIIVDLFSPLK 225
Query: 92 HVEE 81
+ E
Sbjct: 226 DLNE 229
[240][TOP]
>UniRef100_B2ITN1 DNA-directed RNA polymerase, alpha subunit RpoA n=1 Tax=Nostoc
punctiforme PCC 73102 RepID=B2ITN1_NOSP7
Length = 315
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = -3
Query: 269 IDAVFMPVENANHSIH-SYGNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFL 93
ID++FMPV N+S+ S G G ++ L LE+WTNGS++P+EAL A+ L++LF P
Sbjct: 166 IDSIFMPVRKVNYSVEESRGEGLIPKDRLLLEVWTNGSISPQEALSSAAGILVDLFNPLK 225
Query: 92 HVEEE 78
+ E
Sbjct: 226 DISLE 230
[241][TOP]
>UniRef100_B1XJI4 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Synechococcus
sp. PCC 7002 RepID=B1XJI4_SYNP2
Length = 313
Score = 58.9 bits (141), Expect = 2e-07
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHS-YGNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIP 99
IDAVFMPV N+S+ S + G+ ++ L LEIWTNGS+ P+EAL QA+ + LF P
Sbjct: 166 IDAVFMPVTKVNYSVDSIHSEGDAVRDRLTLEIWTNGSIKPEEALSQAAAIAVELFNP 223
[242][TOP]
>UniRef100_Q6J226 RNA polymerase alpha subunit (Fragment) n=1 Tax=Chaetoceros
gracilis RepID=Q6J226_9STRA
Length = 300
Score = 58.9 bits (141), Expect = 2e-07
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRS---YPIDAVFMPVENANHSIHS-YGNGNEKQEILFLEIWTNGS 159
R GY L F D+S IDA+FMP++ + I + Y N N E LFL+IWTNGS
Sbjct: 146 RGTGYKLA-GQTFCDKSEDFLQIDAIFMPIQKVDFKIENVYDNSNSITERLFLDIWTNGS 204
Query: 158 LTPKEALHQASRNLINLF 105
++P +A+ AS+ +I F
Sbjct: 205 ISPDDAISYASKFIIEFF 222
[243][TOP]
>UniRef100_B9YIU5 DNA-directed RNA polymerase, alpha subunit n=1 Tax='Nostoc azollae'
0708 RepID=B9YIU5_ANAAZ
Length = 314
Score = 58.5 bits (140), Expect = 2e-07
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFLH 90
ID+VFMPV N+S+ ++ L LE+WTNGS++P+EAL A+ L++LF P
Sbjct: 166 IDSVFMPVRKVNYSVEEARGDGSLKDRLLLEVWTNGSISPQEALSSAAGILVDLFNPLKD 225
Query: 89 VEEE 78
+ E
Sbjct: 226 ISLE 229
[244][TOP]
>UniRef100_B4B3P8 DNA-directed RNA polymerase, alpha subunit n=1 Tax=Cyanothece sp.
PCC 7822 RepID=B4B3P8_9CHRO
Length = 314
Score = 58.5 bits (140), Expect = 2e-07
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSYG-NGNEKQEILFLEIWTNGSLTPKEALHQASRNLINLFIPFL 93
ID+VFMPV N+S+ +G ++ L +EIWTNGS+ PKEAL +A+ +++LF P
Sbjct: 166 IDSVFMPVTKVNYSVEDVRVDGTSSKDRLTIEIWTNGSVNPKEALSEAAAIIVDLFSPLR 225
Query: 92 HVEE 81
+ E
Sbjct: 226 DLNE 229
[245][TOP]
>UniRef100_Q6J223 RNA polymerase alpha subunit (Fragment) n=1 Tax=Cylindrotheca
fusiformis RepID=Q6J223_CYLFU
Length = 291
Score = 58.5 bits (140), Expect = 2e-07
Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Frame = -3
Query: 317 GYSLKMSNNFEDRS---YPIDAVFMPVENANHSIHS-YGNGNEKQEILFLEIWTNGSLTP 150
GY L S F D S +D +FMPV+ N I + Y N N E +FL+IWTNGS++P
Sbjct: 139 GYKLT-SQAFLDESDNYLQLDTIFMPVQKVNFKIENVYDNNNNITEQVFLDIWTNGSISP 197
Query: 149 KEALHQASRNLINLF 105
EAL A++ I+LF
Sbjct: 198 NEALKSAAQITIDLF 212
[246][TOP]
>UniRef100_A0T0K0 DNA-directed RNA polymerase subunit alpha n=1 Tax=Phaeodactylum
tricornutum RepID=RPOA_PHATR
Length = 311
Score = 58.2 bits (139), Expect = 3e-07
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Frame = -3
Query: 317 GYSLKMSNNF--EDRSY-PIDAVFMPVENANHSIHS-YGNGNEKQEILFLEIWTNGSLTP 150
GY L S NF ED +Y +D +FMPV+ + I + Y N E LFL+IWTNGS++P
Sbjct: 147 GYHLA-SQNFVEEDENYLQLDTIFMPVQKVDFKIENIYDATNNISERLFLDIWTNGSISP 205
Query: 149 KEALHQASRNLINLF 105
+AL A++ +I+LF
Sbjct: 206 NDALESAAQVIIDLF 220
[247][TOP]
>UniRef100_Q6J227 RNA polymerase alpha subunit (Fragment) n=1 Tax=Corethron hystrix
RepID=Q6J227_9STRA
Length = 301
Score = 57.4 bits (137), Expect = 5e-07
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = -3
Query: 317 GYSLKMSNNFEDRS--YPIDAVFMPVENANHSIHS-YGNGNEKQEILFLEIWTNGSLTPK 147
GY L E S IDAVFMPV+ + + + Y E L ++IWTNGS++P+
Sbjct: 150 GYRLVNQTKMESSSDFLEIDAVFMPVQKVDFKVENIYDKNKHISENLIIDIWTNGSISPE 209
Query: 146 EALHQASRNLINLF 105
AL+++S N+I LF
Sbjct: 210 TALYESSNNIIELF 223
[248][TOP]
>UniRef100_A0T0Z4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Thalassiosira
pseudonana RepID=RPOA_THAPS
Length = 313
Score = 57.4 bits (137), Expect = 5e-07
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = -3
Query: 299 SNNFEDRSYPIDAVFMPVENANHSIHS-YGNGNEKQEILFLEIWTNGSLTPKEALHQASR 123
S+ FED DA+FMPV+ + + + Y N N +E L ++IWTNGS++P++A+ S
Sbjct: 158 SDKFED-FIETDAIFMPVQKVDFKVENVYDNSNNIKERLLIDIWTNGSISPEQAIFSGSN 216
Query: 122 NLINLF 105
+INLF
Sbjct: 217 LIINLF 222
[249][TOP]
>UniRef100_Q31L30 DNA-directed RNA polymerase subunit alpha n=2 Tax=Synechococcus
elongatus RepID=RPOA_SYNE7
Length = 309
Score = 57.4 bits (137), Expect = 5e-07
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = -3
Query: 269 IDAVFMPVENANHSIHSYGNGNEKQ-EILFLEIWTNGSLTPKEALHQASRNLINLFIPFL 93
+DAVFMPV N+S+ G + L LE+WTNGSL+P+EAL QA+ L+ LF P
Sbjct: 165 LDAVFMPVRRVNYSVEDARVGESTAIDRLVLEVWTNGSLSPQEALSQAASCLVALFEPLK 224
Query: 92 HV 87
+V
Sbjct: 225 NV 226
[250][TOP]
>UniRef100_Q6B8X4 DNA-directed RNA polymerase subunit alpha n=1 Tax=Gracilaria
tenuistipitata var. liui RepID=RPOA_GRATL
Length = 314
Score = 57.4 bits (137), Expect = 5e-07
Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 10/103 (9%)
Frame = -3
Query: 326 RNRGYSLKMSNNFEDRSYP---IDAVFMPVENANHSIHSYGNGNEK-------QEILFLE 177
+ GY L ++ F+ +S IDAVFMPV N+++ EK QE LFLE
Sbjct: 144 KGSGYKL-VNKGFDKKSIDFLQIDAVFMPVTKFNYTVE------EKKISPILIQEKLFLE 196
Query: 176 IWTNGSLTPKEALHQASRNLINLFIPFLHVEEETFYLENNQHQ 48
+WTNGSL+P+EA+ + ++ L +LF P ++ + +N+++
Sbjct: 197 VWTNGSLSPQEAISEGAQVLHSLFYPLTNLNFQNANNTDNEYE 239