[UP]
[1][TOP]
>UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis
thaliana RepID=RPB1_ARATH
Length = 1840
Score = 303 bits (775), Expect = 9e-81
Identities = 142/142 (100%), Positives = 142/142 (100%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP
Sbjct: 1699 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 1758
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 231
NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP
Sbjct: 1759 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 1818
Query: 230 HEGDKKDKTGKKDASKDDKGNP 165
HEGDKKDKTGKKDASKDDKGNP
Sbjct: 1819 HEGDKKDKTGKKDASKDDKGNP 1840
Score = 168 bits (426), Expect = 3e-40
Identities = 85/123 (69%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSPGYSPTSP YSPTSP+Y P+SP Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1559 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1618
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1619 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSP-S 1677
Query: 239 YTP 231
Y+P
Sbjct: 1678 YSP 1680
Score = 162 bits (410), Expect = 2e-38
Identities = 83/121 (68%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSP+SPGYSPTSP YSPTSP Y PTSP Y+P S YSPS SP + SPA YSPTSP
Sbjct: 1545 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPS---SPGYSPTSPA--YSPTSP 1599
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYT 234
+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+
Sbjct: 1600 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPA-YS 1658
Query: 233 P 231
P
Sbjct: 1659 P 1659
Score = 159 bits (401), Expect = 2e-37
Identities = 85/130 (65%), Positives = 97/130 (74%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSPGYSPTSP+YSP+SP Y PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1566 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS---SGASPDYSP-SAGYSPTLPGY 261
SP+YSPTSPSYSPTSP+YSP+SP YSP SP S S SP YSP S YSPT P Y
Sbjct: 1626 SPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1685
Query: 260 SPSSTGQYTP 231
SP+S Y+P
Sbjct: 1686 SPTSP-SYSP 1694
Score = 101 bits (252), Expect = 4e-20
Identities = 64/127 (50%), Positives = 78/127 (61%), Gaps = 13/127 (10%)
Frame = -3
Query: 572 GYSPTSPSYSPTSPSYGPTSPSY--------NPQS-AKYSPSI---AYSPSNARLSPASP 429
G +P S T G SP+Y +P S A++SP + A+SPS+ SP
Sbjct: 1490 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS---SPG-- 1544
Query: 428 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP S +SP YSP S YSPT P YSP+
Sbjct: 1545 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 1604
Query: 251 STGQYTP 231
S Y+P
Sbjct: 1605 SP-SYSP 1610
[2][TOP]
>UniRef100_Q99367 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99367_SOYBN
Length = 494
Score = 236 bits (603), Expect = 8e-61
Identities = 112/134 (83%), Positives = 118/134 (88%), Gaps = 7/134 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSPGYSPTSPSYSPTSPSY PTSPSYNPQSAKYSPS+AYSPS+ RLSP+SPYSPTSP
Sbjct: 357 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSP 416
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-------GYSPTLPGYSPS 252
NYSPTSPSYSPTSPSYSPSSPTYSPSSPY+SG SPDYSPS+ GYSP+ PGYSPS
Sbjct: 417 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSPS 476
Query: 251 STGQYTPHEGDKKD 210
ST QYTP DK D
Sbjct: 477 STSQYTPQTSDKDD 490
Score = 172 bits (435), Expect = 2e-41
Identities = 87/123 (70%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSPGYSPTSP YSPTSP Y PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 224 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPT 283
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 284 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 342
Query: 239 YTP 231
Y+P
Sbjct: 343 YSP 345
Score = 168 bits (426), Expect = 3e-40
Identities = 85/123 (69%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP-YSPT 417
YSP+SPGYSPTSP YSPTSP Y PTSP Y+P S YSPS YSP++ SP SP YSPT
Sbjct: 217 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 276
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 277 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSP-S 335
Query: 239 YTP 231
Y+P
Sbjct: 336 YSP 338
Score = 167 bits (422), Expect = 7e-40
Identities = 85/123 (69%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP+SPGYSP+SP YSPTSP Y PTSP Y+P S YSP S YSPS+ SP SP YSPT
Sbjct: 210 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 269
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 270 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSP-S 328
Query: 239 YTP 231
Y+P
Sbjct: 329 YSP 331
Score = 163 bits (413), Expect = 8e-39
Identities = 82/122 (67%), Positives = 94/122 (77%), Gaps = 2/122 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 294 YSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 353
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SP YSPTSP YSPTSPSYSP+SP+YSP+SP + S YSPS YSP+ P SPSS Y
Sbjct: 354 SPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSS--PY 411
Query: 236 TP 231
+P
Sbjct: 412 SP 413
Score = 160 bits (404), Expect = 9e-38
Identities = 83/124 (66%), Positives = 95/124 (76%), Gaps = 4/124 (3%)
Frame = -3
Query: 590 YSPTS-PGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSP 420
+SPTS PGYSP+SP YSP+SP Y PTSP Y+P S YSP S YSP++ SP+SP YSP
Sbjct: 202 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 261
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
TSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 262 TSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSP- 320
Query: 242 QYTP 231
Y+P
Sbjct: 321 SYSP 324
Score = 106 bits (265), Expect = 1e-21
Identities = 63/112 (56%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
Frame = -3
Query: 557 SPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSP-SNARLSPASP-YSPTSPNYSPTSPSY 384
SPSY SP+ SP+ + Q + Y +A+SP S+ SP+SP YSP+SP YSPTSP Y
Sbjct: 174 SPSYL-LSPNLR-LSPTSDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY 231
Query: 383 SPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SPTSP YSP+SP YSP+SP S +SP YSP S YSPT P YSP+S Y+P
Sbjct: 232 SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP-SYSP 282
[3][TOP]
>UniRef100_B9SXC0 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SXC0_RICCO
Length = 1855
Score = 234 bits (596), Expect = 5e-60
Identities = 116/152 (76%), Positives = 125/152 (82%), Gaps = 11/152 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSPGYSPTSPSYSPTSPSY PTSPSYNPQSAKYSPS+AYSPS+ RLSP+SPYSPTSP
Sbjct: 1704 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSP 1763
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD-------YSPSAGYSPTLPGYSPS 252
NYSPTSPSYSPTSPSYSPSSPTYSPSSPY+SG PD YSPSAGYSP+ PGYSPS
Sbjct: 1764 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVGPDYSPSSPQYSPSAGYSPSAPGYSPS 1823
Query: 251 STGQYTPHEGDKKDKTGKKDA----SKDDKGN 168
ST QYT K D+T K D +KD+K +
Sbjct: 1824 STSQYT-QTSTKDDRTDKGDRNGRDNKDEKSS 1854
Score = 168 bits (426), Expect = 3e-40
Identities = 85/123 (69%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSPGYSPTSP YSPTSP+Y P+SP Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1564 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1623
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1624 SPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSP-S 1682
Query: 239 YTP 231
Y+P
Sbjct: 1683 YSP 1685
Score = 166 bits (421), Expect = 1e-39
Identities = 85/123 (69%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP+SPGYSP+SP YSPTSP Y PTSP Y+P S YSP S YSPS+ SP SP YSPT
Sbjct: 1543 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 1602
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1603 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPA- 1661
Query: 239 YTP 231
Y+P
Sbjct: 1662 YSP 1664
Score = 162 bits (410), Expect = 2e-38
Identities = 82/122 (67%), Positives = 94/122 (77%), Gaps = 2/122 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1641 YSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SP YSPTSP YSPTSPSYSP+SP+YSP+SP + S YSPS YSP+ P SPSS Y
Sbjct: 1701 SPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSS--PY 1758
Query: 236 TP 231
+P
Sbjct: 1759 SP 1760
Score = 159 bits (401), Expect = 2e-37
Identities = 83/124 (66%), Positives = 95/124 (76%), Gaps = 4/124 (3%)
Frame = -3
Query: 590 YSPT-SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSP 420
+SPT SPGYSP+SP YSP+SP Y PTSP Y+P S YSP S YSP++ SP+SP YSP
Sbjct: 1535 FSPTLSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 1594
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
TSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1595 TSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPA 1654
Query: 242 QYTP 231
Y+P
Sbjct: 1655 -YSP 1657
Score = 157 bits (398), Expect = 5e-37
Identities = 85/130 (65%), Positives = 96/130 (73%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSPGYSPTSP+YSP+SP Y PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1571 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS---SGASPDYSP-SAGYSPTLPGY 261
SP+YSPTSPSYSPTSP YSP+SP YSP SP S S SP YSP S YSPT P Y
Sbjct: 1631 SPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1690
Query: 260 SPSSTGQYTP 231
SP+S Y+P
Sbjct: 1691 SPTSP-SYSP 1699
Score = 120 bits (300), Expect = 1e-25
Identities = 68/122 (55%), Positives = 79/122 (64%), Gaps = 3/122 (2%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP-YSPTS 414
SPT+ S P SP+ SP Y+P S YSPS YSP++ SP SP YSPTS
Sbjct: 1519 SPTTDAQFSPYVSGMPFSPTL---SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTS 1575
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQY 237
P YSPTSP+YSP+SP YSP+SP YSP+SP S SP YSP S YSPT P YSP+S Y
Sbjct: 1576 PGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SY 1634
Query: 236 TP 231
+P
Sbjct: 1635 SP 1636
Score = 98.2 bits (243), Expect = 4e-19
Identities = 61/120 (50%), Positives = 74/120 (61%), Gaps = 6/120 (5%)
Frame = -3
Query: 572 GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPS-NARLSP---ASPYSPT-SPN 408
G +P S T G SPSY SPS+ SP+ +A+ SP P+SPT SP
Sbjct: 1488 GMTPARSPVSVTPYHDGMMSPSY-----LLSPSLRLSPTTDAQFSPYVSGMPFSPTLSPG 1542
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSP+SP YSP+SP YSP+SP YSP+SP S SP YSP S YSP+ PGYSP+S Y+P
Sbjct: 1543 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 1601
[4][TOP]
>UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA
binding / DNA-directed RNA polymerase n=1 Tax=Vitis
vinifera RepID=UPI0001985649
Length = 1848
Score = 229 bits (585), Expect = 9e-59
Identities = 108/132 (81%), Positives = 116/132 (87%), Gaps = 7/132 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSPGYSPTSPSYSPTSPSY PTSPSYNP SAKYSPS+AYSPS+ RLSP+SPYSPTSP
Sbjct: 1711 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSLAYSPSSPRLSPSSPYSPTSP 1770
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD-------YSPSAGYSPTLPGYSPS 252
NYSPTSPSYSPTSPSYSP+SPTYSP+SPY+SG SPD YSPSAGYSP+ PGYSPS
Sbjct: 1771 NYSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPSAGYSPSAPGYSPS 1830
Query: 251 STGQYTPHEGDK 216
ST QYTP +K
Sbjct: 1831 STSQYTPQMSNK 1842
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSPGYSPTSP YSPTSP Y PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 1557 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPT 1616
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1617 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSP-S 1675
Query: 239 YTP 231
Y+P
Sbjct: 1676 YSP 1678
Score = 166 bits (421), Expect = 1e-39
Identities = 85/123 (69%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP+SPGYSP+SP YSPTSP Y PTSP Y+P S YSP S YSPS+ SP SP YSPT
Sbjct: 1543 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 1602
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1603 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPA- 1661
Query: 239 YTP 231
Y+P
Sbjct: 1662 YSP 1664
Score = 166 bits (419), Expect = 2e-39
Identities = 84/123 (68%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSP+SP YSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1578 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1638 SPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1696
Query: 239 YTP 231
Y+P
Sbjct: 1697 YSP 1699
Score = 164 bits (415), Expect = 5e-39
Identities = 82/122 (67%), Positives = 95/122 (77%), Gaps = 2/122 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1648 YSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1707
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SP YSPTSP YSPTSPSYSP+SP+YSP+SP + +S YSPS YSP+ P SPSS Y
Sbjct: 1708 SPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSLAYSPSSPRLSPSS--PY 1765
Query: 236 TP 231
+P
Sbjct: 1766 SP 1767
Score = 159 bits (401), Expect = 2e-37
Identities = 83/124 (66%), Positives = 95/124 (76%), Gaps = 4/124 (3%)
Frame = -3
Query: 590 YSPTS-PGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSP 420
+SPTS PGYSP+SP YSP+SP Y PTSP Y+P S YSP S YSP++ SP+SP YSP
Sbjct: 1535 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 1594
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
TSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1595 TSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSP- 1653
Query: 242 QYTP 231
Y+P
Sbjct: 1654 SYSP 1657
Score = 153 bits (386), Expect = 1e-35
Identities = 83/125 (66%), Positives = 91/125 (72%), Gaps = 12/125 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1662 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPT 1721
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLP---------- 267
SP+YSPTSPSYSPTSPSY+PSS YSPS YS +SP SPS+ YSPT P
Sbjct: 1722 SPSYSPTSPSYSPTSPSYNPSSAKYSPSLAYSP-SSPRLSPSSPYSPTSPNYSPTSPSYS 1780
Query: 266 GYSPS 252
SPS
Sbjct: 1781 PTSPS 1785
Score = 104 bits (259), Expect = 6e-21
Identities = 57/98 (58%), Positives = 69/98 (70%), Gaps = 3/98 (3%)
Frame = -3
Query: 515 SPSYNPQSAKYSPSIAYSP-SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTY 342
SP + Q + Y +A+SP S+ SP+SP YSP+SP YSPTSP YSPTSP YSP+SP Y
Sbjct: 1519 SPITDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGY 1578
Query: 341 SPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP+SP S +SP YSP S YSPT P YSP+S Y+P
Sbjct: 1579 SPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP-SYSP 1615
Score = 61.6 bits (148), Expect = 4e-08
Identities = 48/106 (45%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Frame = -3
Query: 536 SPSYGP-TSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPT--SPSYSPTS-P 369
+PS P T Y+ SP+ SP N RLSP T +SP ++SPTS P
Sbjct: 1490 TPSRSPITGTPYH--DGMMSPNYLLSP-NLRLSPI-----TDAQFSPYVGGMAFSPTSSP 1541
Query: 368 SYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 231
YSPSSP YSPSSP GYSPT PGYSP+S G Y+P
Sbjct: 1542 GYSPSSPGYSPSSP-------------GYSPTSPGYSPTSPG-YSP 1573
[5][TOP]
>UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99368_SOYBN
Length = 977
Score = 212 bits (539), Expect = 2e-53
Identities = 105/134 (78%), Positives = 110/134 (82%), Gaps = 7/134 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSP YSPTSPSYSPTSPSY PTSPSYNPQSAKYSPS+AYSPS+ RLSP TSP
Sbjct: 850 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSP------TSP 903
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY-------SPSAGYSPTLPGYSPS 252
NYSPTSPSYSPTSPSYSPSSPTYSPSSPY+SG SPDY SPSAGYSP+ PGYSPS
Sbjct: 904 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPTSPQFSPSAGYSPSQPGYSPS 963
Query: 251 STGQYTPHEGDKKD 210
ST Q TP DK +
Sbjct: 964 STSQDTPQTSDKDE 977
Score = 157 bits (396), Expect = 8e-37
Identities = 79/122 (64%), Positives = 94/122 (77%), Gaps = 2/122 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YS TSP+Y PTSPSY+P S YSP S +YS ++ SP SP YSPT
Sbjct: 787 YSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPT 846
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SP+YSPTSP+YSPTSPSYSP+SP+YSP+SP + S YSPS YSP+ P SP+S Y
Sbjct: 847 SPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPTSP-NY 905
Query: 236 TP 231
+P
Sbjct: 906 SP 907
Score = 143 bits (360), Expect = 1e-32
Identities = 79/133 (59%), Positives = 89/133 (66%), Gaps = 13/133 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPA-SPYSPTS 414
YSP+SPGYSP+SP YSPTSP Y PTSP Y+P S YSPS SP + SPA SP SP+
Sbjct: 731 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPS---SPGYSPTSPAYSPTSPSY 787
Query: 413 -----------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 270
P YS TSP+YSPTSPSYSP+SP YSP+SP S SP YSP S YSPT
Sbjct: 788 SPTSPAYSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTS 847
Query: 269 PGYSPSSTGQYTP 231
P YSP+S Y+P
Sbjct: 848 PSYSPTSPA-YSP 859
Score = 140 bits (354), Expect = 6e-32
Identities = 72/116 (62%), Positives = 84/116 (72%), Gaps = 2/116 (1%)
Frame = -3
Query: 590 YSPTS-PGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTS 414
+SP+S PGYSP+SP YSP+SP Y PTSP Y+P S YSP+ SP+ YSP+S
Sbjct: 723 FSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPT---SPT---------YSPSS 770
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
P YSPTSP+YSPTSPSYSP+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 771 PGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPTS 826
Score = 108 bits (270), Expect = 3e-22
Identities = 64/118 (54%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPNYS 402
SP Y SP+ + S SP + S S YSPS+ SP+SP YSPTSP YS
Sbjct: 695 SPSYL-LSPNLRLSPSSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPSSPGYSPTSPGYS 753
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
PTSP YSPTSP+YSPSSP YSP+SP S SP YSP S YSPT P YS S++ Y+P
Sbjct: 754 PTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYS-STSPAYSP 810
[6][TOP]
>UniRef100_Q56Z04 DNA-directed RNA polymerase II largest chain (Fragment) n=1
Tax=Arabidopsis thaliana RepID=Q56Z04_ARATH
Length = 99
Score = 208 bits (529), Expect = 3e-52
Identities = 97/97 (100%), Positives = 97/97 (100%)
Frame = -3
Query: 455 NARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSP 276
NARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSP
Sbjct: 3 NARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSP 62
Query: 275 TLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 165
TLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP
Sbjct: 63 TLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 99
[7][TOP]
>UniRef100_B9FZ51 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FZ51_ORYSJ
Length = 1526
Score = 197 bits (500), Expect = 7e-49
Identities = 99/141 (70%), Positives = 109/141 (77%), Gaps = 10/141 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSPGYSPTSPSYSPTSP+Y PTSPSYNP SAKYSPS AYSPS+ RL SPYS TSP
Sbjct: 1389 YSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRL---SPYSQTSP 1445
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYS---------SGASPDYSPSAGYSPTLPGYS 258
NYSPTSP+YSPTSPSYS SP+YSP+SPY+ S SP+YSPS YSPT PGYS
Sbjct: 1446 NYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSPNYSPSGSYSPTAPGYS 1505
Query: 257 PSSTG-QYTPHEGDKKDKTGK 198
PSSTG Q++P DK + K
Sbjct: 1506 PSSTGQQFSPQAADKDKEKAK 1526
Score = 171 bits (433), Expect = 4e-41
Identities = 87/123 (70%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1263 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 1322
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1323 SPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1381
Query: 239 YTP 231
Y+P
Sbjct: 1382 YSP 1384
Score = 164 bits (415), Expect = 5e-39
Identities = 86/123 (69%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP PGYSPTSPSYSP SPSY PTSPSY P S YSP S +YSP++ SP SP YSPT
Sbjct: 1229 YSP-GPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPT 1287
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1288 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSP-S 1346
Query: 239 YTP 231
Y+P
Sbjct: 1347 YSP 1349
Score = 163 bits (413), Expect = 8e-39
Identities = 83/124 (66%), Positives = 94/124 (75%), Gaps = 4/124 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1326 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1385
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS--TG 243
SP YSPTSP YSPTSPSYSP+SP YSP+SP + +S YSPS YSP+ P SP S +
Sbjct: 1386 SPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRLSPYSQTSP 1445
Query: 242 QYTP 231
Y+P
Sbjct: 1446 NYSP 1449
Score = 142 bits (357), Expect = 3e-32
Identities = 76/121 (62%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSP+SP YSP P YSPTSPSY P SPSY+P S Y+P SP+ YSPTSP
Sbjct: 1222 YSPSSPVYSP-GPGYSPTSPSYSPASPSYSPTSPSYTPG---SPT---------YSPTSP 1268
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYT 234
+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+
Sbjct: 1269 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPA-YS 1327
Query: 233 P 231
P
Sbjct: 1328 P 1328
Score = 110 bits (276), Expect = 6e-23
Identities = 64/123 (52%), Positives = 73/123 (59%), Gaps = 4/123 (3%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPT--SPSYGPT-SPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT 417
SP T +SP ++ P SP Y P S YSPS+ SP YSPT
Sbjct: 1184 SPNIRASPITDAQFSPYVGGMAFSPVPSPGYTPSSGG-----GYSPSSPVYSPGPGYSPT 1238
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSP SPSYSPTSPSY+P SPTYSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1239 SPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1297
Query: 239 YTP 231
Y+P
Sbjct: 1298 YSP 1300
[8][TOP]
>UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5YGY9_SORBI
Length = 1857
Score = 189 bits (480), Expect = 1e-46
Identities = 95/140 (67%), Positives = 108/140 (77%), Gaps = 9/140 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSPGYSPTSPSYSPTSPSY PTSPSYNP SAKYSPS AYSPS+ R+ +PYS TSP
Sbjct: 1725 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSHAYSPSSPRM---TPYSQTSP 1781
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYS---------SGASPDYSPSAGYSPTLPGYS 258
+YSPTSP+YSPTSPSYS SP+YSP+SP++ S SP+YSPS YSPT PGYS
Sbjct: 1782 SYSPTSPTYSPTSPSYSQPSPSYSPTSPFNTSGGPSPDYSPTSPNYSPSGSYSPTAPGYS 1841
Query: 257 PSSTGQYTPHEGDKKDKTGK 198
PSSTGQ DK D++ +
Sbjct: 1842 PSSTGQ----GNDKDDESNR 1857
Score = 170 bits (431), Expect = 7e-41
Identities = 87/123 (70%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1599 YSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 1658
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1659 SPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1717
Query: 239 YTP 231
Y+P
Sbjct: 1718 YSP 1720
Score = 164 bits (414), Expect = 6e-39
Identities = 84/123 (68%), Positives = 94/123 (76%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP SP YSP SPSYSPTSPSY P SP+Y+P S YSP S YSP++ SP SP YSPT
Sbjct: 1564 YSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPT 1623
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1624 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSP-S 1682
Query: 239 YTP 231
Y+P
Sbjct: 1683 YSP 1685
Score = 162 bits (411), Expect = 1e-38
Identities = 82/124 (66%), Positives = 95/124 (76%), Gaps = 4/124 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1662 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1721
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS--TG 243
SP YSPTSP YSPTSPSYSP+SP+YSP+SP + +S YSPS YSP+ P +P S +
Sbjct: 1722 SPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSHAYSPSSPRMTPYSQTSP 1781
Query: 242 QYTP 231
Y+P
Sbjct: 1782 SYSP 1785
Score = 159 bits (402), Expect = 2e-37
Identities = 87/132 (65%), Positives = 94/132 (71%), Gaps = 12/132 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1676 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPT 1735
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS---------SGASPDYSP-SAGYSPTLP 267
SP+YSPTSPSYSPTSPSY+PSS YSPS YS S SP YSP S YSPT P
Sbjct: 1736 SPSYSPTSPSYSPTSPSYNPSSAKYSPSHAYSPSSPRMTPYSQTSPSYSPTSPTYSPTSP 1795
Query: 266 GYSPSSTGQYTP 231
YS S Y+P
Sbjct: 1796 SYSQPSP-SYSP 1806
Score = 145 bits (367), Expect = 2e-33
Identities = 82/141 (58%), Positives = 92/141 (65%), Gaps = 23/141 (16%)
Frame = -3
Query: 584 PTSPGYSPTS--------------------PSYSPTSPSYGPTSPSYNPQSAKYSP-SIA 468
P+ GYSP+S PSYSP SPSY PTSPSY P S YSP S
Sbjct: 1539 PSPGGYSPSSGGYSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPN 1598
Query: 467 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 294
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1599 YSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPT 1658
Query: 293 SAGYSPTLPGYSPSSTGQYTP 231
S YSPT P YSP+S Y+P
Sbjct: 1659 SPAYSPTSPAYSPTSP-SYSP 1678
Score = 140 bits (354), Expect = 6e-32
Identities = 74/121 (61%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSP------SYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP 429
YSP+S GYSP+SP YSP SPSY P SPSY+P S Y+P SP+
Sbjct: 1544 YSPSSGGYSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPG---SPT--------- 1591
Query: 428 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
YSPTSPNYSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+
Sbjct: 1592 YSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1651
Query: 251 S 249
S
Sbjct: 1652 S 1652
Score = 122 bits (306), Expect = 2e-26
Identities = 65/116 (56%), Positives = 79/116 (68%), Gaps = 2/116 (1%)
Frame = -3
Query: 572 GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPNYSPT 396
G+ SP SP Y P+S Y+P S ++P YSP + SPASP YSPTSP+Y+P
Sbjct: 1531 GHMAFSPFPSPGG--YSPSSGGYSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPG 1588
Query: 395 SPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP+YSPTSP+YSP+SPTYSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1589 SPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1643
Score = 109 bits (273), Expect = 1e-22
Identities = 60/104 (57%), Positives = 68/104 (65%), Gaps = 2/104 (1%)
Frame = -3
Query: 536 SPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYS 360
SP G + S P YSPS YSPS+ +P YSP SP+YSP SPSYSPTSPSY+
Sbjct: 1527 SPYVGHMAFSPFPSPGGYSPSSGGYSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYT 1586
Query: 359 PSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P SPTYSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1587 PGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSP-SYSP 1629
Score = 56.6 bits (135), Expect = 1e-06
Identities = 41/91 (45%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Frame = -3
Query: 482 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY------S 321
SPS SP N R SP + + SP + S P+ YSPSS YSPSSP
Sbjct: 1506 SPSYLLSP-NIRASPINTDASFSPYVGHMAFSPFPSPGGYSPSSGGYSPSSPVFTPEKGY 1564
Query: 320 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
S SP YSP S YSPT P Y+P S Y+P
Sbjct: 1565 SPLSPSYSPASPSYSPTSPSYTPGSP-TYSP 1594
[9][TOP]
>UniRef100_Q9BMP3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=Q9BMP3_MONBE
Length = 1743
Score = 179 bits (453), Expect = 2e-43
Identities = 90/131 (68%), Positives = 103/131 (78%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSPGYSP+SPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1613 YSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1672
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA---------GYSPTLPG 264
SPNYSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+A GYSPT PG
Sbjct: 1673 SPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSPTSPG 1732
Query: 263 YSPSSTGQYTP 231
YSP+S G Y+P
Sbjct: 1733 YSPTSPG-YSP 1742
Score = 157 bits (398), Expect = 5e-37
Identities = 85/132 (64%), Positives = 98/132 (74%), Gaps = 12/132 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSP--------SYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARL-S 441
YSPTSP YSPTSP SYSPTSPSY P+SP+YN QS YSP S +YSP++ + S
Sbjct: 1548 YSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKS 1607
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP YSP+SPSYSPTSP+YSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1608 PTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSP 1667
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1668 SYSPTSP-NYSP 1678
Score = 150 bits (380), Expect = 6e-35
Identities = 80/130 (61%), Positives = 89/130 (68%), Gaps = 17/130 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1627 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1686
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTY---------------SPSSPYSSGASPDYSPSAGY 282
SPNYSPTSPSYSPTSP+YSP+SP+Y SP+SP GY
Sbjct: 1687 SPNYSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSPTSP-------------GY 1733
Query: 281 SPTLPGYSPS 252
SPT PGYSPS
Sbjct: 1734 SPTSPGYSPS 1743
Score = 136 bits (343), Expect = 1e-30
Identities = 76/134 (56%), Positives = 94/134 (70%), Gaps = 14/134 (10%)
Frame = -3
Query: 590 YSPTSP-GYSPTSPSYSPTSPSYGPTSPSYNPQS-AKYSP-SIAYSPSNARLSPASP--- 429
Y P+SP GYSPTSPSYSPTSP PTSP ++P S A ++P S YSP++ SP SP
Sbjct: 1504 YDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVG 1563
Query: 428 ------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YSSGASPDYSP-SAGYSPT 273
YSPTSP+YSP+SP+Y+ SP+YSP+SP+YSP+SP S SP YSP S GYSP+
Sbjct: 1564 GAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPS 1623
Query: 272 LPGYSPSSTGQYTP 231
P YSP+S Y+P
Sbjct: 1624 SPSYSPTSP-NYSP 1636
Score = 89.0 bits (219), Expect = 3e-16
Identities = 61/128 (47%), Positives = 70/128 (54%), Gaps = 14/128 (10%)
Frame = -3
Query: 590 YSPTSPG-YSP---TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYS 423
+SP G +SP SP SP G SP S S Y PS SPA YS
Sbjct: 1460 FSPVVAGAFSPGGMLSPGGIAQSPG-GAMSPGGAMSPGVVSASPFYDPS----SPAG-YS 1513
Query: 422 PTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSP---------SAGYSPT 273
PTSP+YSPTSP SPTSP +SP+SP ++P+SP+ S SP YSP S YSPT
Sbjct: 1514 PTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYSPT 1573
Query: 272 LPGYSPSS 249
P YSPSS
Sbjct: 1574 SPSYSPSS 1581
[10][TOP]
>UniRef100_A9V5W6 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9V5W6_MONBE
Length = 1307
Score = 179 bits (453), Expect = 2e-43
Identities = 90/131 (68%), Positives = 103/131 (78%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSPGYSP+SPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1177 YSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1236
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA---------GYSPTLPG 264
SPNYSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP+A GYSPT PG
Sbjct: 1237 SPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSPTSPG 1296
Query: 263 YSPSSTGQYTP 231
YSP+S G Y+P
Sbjct: 1297 YSPTSPG-YSP 1306
Score = 157 bits (398), Expect = 5e-37
Identities = 85/132 (64%), Positives = 98/132 (74%), Gaps = 12/132 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSP--------SYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARL-S 441
YSPTSP YSPTSP SYSPTSPSY P+SP+YN QS YSP S +YSP++ + S
Sbjct: 1112 YSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKS 1171
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP YSP+SPSYSPTSP+YSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1172 PTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSP 1231
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1232 SYSPTSP-NYSP 1242
Score = 150 bits (380), Expect = 6e-35
Identities = 80/130 (61%), Positives = 89/130 (68%), Gaps = 17/130 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1191 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1250
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTY---------------SPSSPYSSGASPDYSPSAGY 282
SPNYSPTSPSYSPTSP+YSP+SP+Y SP+SP GY
Sbjct: 1251 SPNYSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSPTSP-------------GY 1297
Query: 281 SPTLPGYSPS 252
SPT PGYSPS
Sbjct: 1298 SPTSPGYSPS 1307
Score = 136 bits (343), Expect = 1e-30
Identities = 76/134 (56%), Positives = 94/134 (70%), Gaps = 14/134 (10%)
Frame = -3
Query: 590 YSPTSP-GYSPTSPSYSPTSPSYGPTSPSYNPQS-AKYSP-SIAYSPSNARLSPASP--- 429
Y P+SP GYSPTSPSYSPTSP PTSP ++P S A ++P S YSP++ SP SP
Sbjct: 1068 YDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVG 1127
Query: 428 ------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YSSGASPDYSP-SAGYSPT 273
YSPTSP+YSP+SP+Y+ SP+YSP+SP+YSP+SP S SP YSP S GYSP+
Sbjct: 1128 GAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPS 1187
Query: 272 LPGYSPSSTGQYTP 231
P YSP+S Y+P
Sbjct: 1188 SPSYSPTSP-NYSP 1200
Score = 89.0 bits (219), Expect = 3e-16
Identities = 61/128 (47%), Positives = 70/128 (54%), Gaps = 14/128 (10%)
Frame = -3
Query: 590 YSPTSPG-YSP---TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYS 423
+SP G +SP SP SP G SP S S Y PS SPA YS
Sbjct: 1024 FSPVVAGAFSPGGMLSPGGIAQSPG-GAMSPGGAMSPGVVSASPFYDPS----SPAG-YS 1077
Query: 422 PTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSP---------SAGYSPT 273
PTSP+YSPTSP SPTSP +SP+SP ++P+SP+ S SP YSP S YSPT
Sbjct: 1078 PTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYSPT 1137
Query: 272 LPGYSPSS 249
P YSPSS
Sbjct: 1138 SPSYSPSS 1145
[11][TOP]
>UniRef100_Q6CL79 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CL79_KLULA
Length = 1720
Score = 179 bits (453), Expect = 2e-43
Identities = 92/143 (64%), Positives = 107/143 (74%), Gaps = 7/143 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1578 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS---- 252
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+
Sbjct: 1638 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQY 1697
Query: 251 STGQYTPHEGDKKDKTGKKDASK 183
S G Y+P E +++ +K +K
Sbjct: 1698 SPGSYSPAEPKQQESDEEKKENK 1720
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1557 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1616
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1617 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1675
Query: 239 YTP 231
Y+P
Sbjct: 1676 YSP 1678
Score = 166 bits (421), Expect = 1e-39
Identities = 85/121 (70%), Positives = 96/121 (79%), Gaps = 1/121 (0%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
+SPTSPGYSPTSPSYSPTSPSY PTSPSY+P S YSP+ SPS + SP+ YSPTSP
Sbjct: 1543 FSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT---SPSYSPTSPS--YSPTSP 1597
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYT 234
+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+
Sbjct: 1598 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYS 1656
Query: 233 P 231
P
Sbjct: 1657 P 1657
Score = 141 bits (355), Expect = 4e-32
Identities = 75/120 (62%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
Frame = -3
Query: 584 PTSPGYSP-TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
PTSPG+ +SP +SPTSP Y PTSPSY+P S YSP+ SPS YSPTSP+
Sbjct: 1530 PTSPGFGEVSSPGFSPTSPGYSPTSPSYSPTSPSYSPT---SPS---------YSPTSPS 1577
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1578 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1636
Score = 106 bits (265), Expect = 1e-21
Identities = 64/111 (57%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Frame = -3
Query: 545 SPTSP----SYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYS 381
S TSP GPTSP + S SP SP SP YSPTSP+YSPTSPSYS
Sbjct: 1518 SATSPFSGYGNGPTSPGFGEVS---------SPG---FSPTSPGYSPTSPSYSPTSPSYS 1565
Query: 380 PTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
PTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1566 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1615
[12][TOP]
>UniRef100_O94231 RNA polymerase II largest subunit (Fragment) n=1 Tax=Kluyveromyces
lactis RepID=O94231_KLULA
Length = 414
Score = 179 bits (453), Expect = 2e-43
Identities = 92/143 (64%), Positives = 107/143 (74%), Gaps = 7/143 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 272 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 331
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS---- 252
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+
Sbjct: 332 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQY 391
Query: 251 STGQYTPHEGDKKDKTGKKDASK 183
S G Y+P E +++ +K +K
Sbjct: 392 SPGSYSPAEPKQQESDEEKKENK 414
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 251 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 310
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 311 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 369
Query: 239 YTP 231
Y+P
Sbjct: 370 YSP 372
Score = 166 bits (421), Expect = 1e-39
Identities = 85/121 (70%), Positives = 96/121 (79%), Gaps = 1/121 (0%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
+SPTSPGYSPTSPSYSPTSPSY PTSPSY+P S YSP+ SPS + SP+ YSPTSP
Sbjct: 237 FSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT---SPSYSPTSPS--YSPTSP 291
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYT 234
+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+
Sbjct: 292 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYS 350
Query: 233 P 231
P
Sbjct: 351 P 351
Score = 141 bits (355), Expect = 4e-32
Identities = 75/120 (62%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
Frame = -3
Query: 584 PTSPGYSP-TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
PTSPG+ +SP +SPTSP Y PTSPSY+P S YSP+ SPS YSPTSP+
Sbjct: 224 PTSPGFGEVSSPGFSPTSPGYSPTSPSYSPTSPSYSPT---SPS---------YSPTSPS 271
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 272 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 330
Score = 106 bits (265), Expect = 1e-21
Identities = 64/111 (57%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Frame = -3
Query: 545 SPTSP----SYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYS 381
S TSP GPTSP + S SP SP SP YSPTSP+YSPTSPSYS
Sbjct: 212 SATSPFSGYGNGPTSPGFGEVS---------SPG---FSPTSPGYSPTSPSYSPTSPSYS 259
Query: 380 PTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
PTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 260 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 309
[13][TOP]
>UniRef100_C4VAM1 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4VAM1_NOSCE
Length = 1612
Score = 177 bits (450), Expect = 4e-43
Identities = 94/145 (64%), Positives = 107/145 (73%), Gaps = 9/145 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1465 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1524
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS--- 249
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1525 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSLSY 1584
Query: 248 ---TGQYTPHEGDKKDKTGKKDASK 183
+ Y+P G KKDK K + +
Sbjct: 1585 SPTSPSYSP-TGYKKDKDKKNERKR 1608
Score = 160 bits (404), Expect = 9e-38
Identities = 83/121 (68%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP+ SPS YSPTSP
Sbjct: 1458 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT---SPS---------YSPTSP 1505
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYT 234
+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+
Sbjct: 1506 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYS 1564
Query: 233 P 231
P
Sbjct: 1565 P 1565
Score = 150 bits (378), Expect = 9e-35
Identities = 79/123 (64%), Positives = 90/123 (73%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP +S SPSY SPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1437 YSPKLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1496
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1497 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1555
Query: 239 YTP 231
Y+P
Sbjct: 1556 YSP 1558
Score = 119 bits (299), Expect = 1e-25
Identities = 68/118 (57%), Positives = 81/118 (68%), Gaps = 5/118 (4%)
Frame = -3
Query: 569 YSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAY----SPSNARLSPASPYSPTSPNYS 402
YSP S S S +S G SP+Y + +KYSP ++ SPS SP+ YSPTSP+YS
Sbjct: 1412 YSPVSESQSISS---GNWSPAYLAEESKYSPKLSLFSVGSPSYGSASPS--YSPTSPSYS 1466
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
PTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1467 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1523
[14][TOP]
>UniRef100_A3GID7 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3GID7_PICST
Length = 1739
Score = 177 bits (449), Expect = 6e-43
Identities = 91/141 (64%), Positives = 106/141 (75%), Gaps = 3/141 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1659 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPQYSPTSP-Q 1717
Query: 239 YTPHEGDKKDKTGKKDASKDD 177
Y+P + + K + K++
Sbjct: 1718 YSPGSPEYSPNSPKTEDKKNE 1738
Score = 175 bits (444), Expect = 2e-42
Identities = 89/123 (72%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1571 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1631 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-Q 1689
Query: 239 YTP 231
Y+P
Sbjct: 1690 YSP 1692
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1550 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1609
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1610 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1668
Query: 239 YTP 231
Y+P
Sbjct: 1669 YSP 1671
Score = 168 bits (425), Expect = 3e-40
Identities = 86/123 (69%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y TSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1543 YGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1602
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1603 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1661
Query: 239 YTP 231
Y+P
Sbjct: 1662 YSP 1664
Score = 148 bits (374), Expect = 3e-34
Identities = 78/117 (66%), Positives = 86/117 (73%), Gaps = 1/117 (0%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSP 399
SPGY TSPSYSPTSPSY PTSPSY+P S YSP+ SPA YSPTSP+YSP
Sbjct: 1540 SPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPT----------SPA--YSPTSPSYSP 1587
Query: 398 TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
TSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1588 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1643
Score = 134 bits (336), Expect = 7e-30
Identities = 78/123 (63%), Positives = 88/123 (71%), Gaps = 5/123 (4%)
Frame = -3
Query: 584 PTSPGYSPTSP-SYSPTSPSYGPT-SPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
PTSP S TSP SY TSPS+G + SP Y S YSP S +YSP++ SP SP YSPT
Sbjct: 1517 PTSP--SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1574
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1575 SPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1633
Query: 239 YTP 231
Y+P
Sbjct: 1634 YSP 1636
Score = 116 bits (290), Expect = 2e-24
Identities = 70/119 (58%), Positives = 78/119 (65%), Gaps = 2/119 (1%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSP-SYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNY 405
TS G PTSPS TSP SYG TSPS+ + SP SP+ YSPTSP+Y
Sbjct: 1511 TSYGGQPTSPS--ATSPFSYGSTSPSFGG---------SVSPGYGGTSPS--YSPTSPSY 1557
Query: 404 SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1558 SPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1615
[15][TOP]
>UniRef100_Q75A34 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Eremothecium
gossypii RepID=RPB1_ASHGO
Length = 1745
Score = 177 bits (449), Expect = 6e-43
Identities = 91/142 (64%), Positives = 103/142 (72%), Gaps = 3/142 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1661 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-Q 1719
Query: 239 YTPHEGDKKDKTGKKDASKDDK 174
Y+P D + D+
Sbjct: 1720 YSPRSPSYSPSFNNNDKEQKDE 1741
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1552 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1611
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1670
Query: 239 YTP 231
Y+P
Sbjct: 1671 YSP 1673
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1559 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1619 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1677
Query: 239 YTP 231
Y+P
Sbjct: 1678 YSP 1680
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1639
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1640 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1698
Query: 239 YTP 231
Y+P
Sbjct: 1699 YSP 1701
Score = 172 bits (435), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
+SPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1545 FSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1605 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1663
Query: 239 YTP 231
Y+P
Sbjct: 1664 YSP 1666
Score = 164 bits (416), Expect = 4e-39
Identities = 83/120 (69%), Positives = 96/120 (80%), Gaps = 3/120 (2%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTSPN 408
+SPG+SPTSP+YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPTSP+
Sbjct: 1541 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1600
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1659
Score = 162 bits (411), Expect = 1e-38
Identities = 90/141 (63%), Positives = 103/141 (73%), Gaps = 11/141 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
SP+YSPTSPSYSPTSPSYSP+SP+YSP SP SP YSP S YSPT P YSP
Sbjct: 1668 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP----TSPSYSPTSPSYSPTSPQYSPR 1723
Query: 251 STGQYTP----HEGDKKDKTG 201
S Y+P ++ ++KD+ G
Sbjct: 1724 SP-SYSPSFNNNDKEQKDENG 1743
Score = 141 bits (356), Expect = 3e-32
Identities = 75/120 (62%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Frame = -3
Query: 584 PTSPGYSP-TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
PTSPG+ +SP +SPTSP+Y PTSPSY+P S YSP+ SPS YSPTSP+
Sbjct: 1532 PTSPGFGDVSSPGFSPTSPAYSPTSPSYSPTSPSYSPT---SPS---------YSPTSPS 1579
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1638
Score = 106 bits (264), Expect = 2e-21
Identities = 59/99 (59%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Frame = -3
Query: 524 GPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPT 345
GPTSP + S SP + SPA YSPTSP+YSPTSPSYSPTSPSYSP+SP+
Sbjct: 1531 GPTSPGFGDVS---------SPGFSPTSPA--YSPTSPSYSPTSPSYSPTSPSYSPTSPS 1579
Query: 344 YSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1617
[16][TOP]
>UniRef100_UPI0000546D90 PREDICTED: im:7136071 isoform 1 n=1 Tax=Danio rerio
RepID=UPI0000546D90
Length = 1972
Score = 176 bits (447), Expect = 9e-43
Identities = 89/123 (72%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1696 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1755
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SPNY+PTSPSYSPTSPSYSP+SP+YSP+SP + SP+YSP S YSPT P YSPSS +
Sbjct: 1756 SPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSSP-R 1814
Query: 239 YTP 231
YTP
Sbjct: 1815 YTP 1817
Score = 175 bits (443), Expect = 3e-42
Identities = 89/123 (72%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1699
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1700 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1758
Query: 239 YTP 231
YTP
Sbjct: 1759 YTP 1761
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1678
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1679 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1737
Query: 239 YTP 231
Y+P
Sbjct: 1738 YSP 1740
Score = 171 bits (433), Expect = 4e-41
Identities = 95/152 (62%), Positives = 106/152 (69%), Gaps = 10/152 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y P S YSP S +YSP++ SP SP Y+PT
Sbjct: 1731 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPT 1790
Query: 416 SPNYSPTSPSYSPTSPSYSPS-------SPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
SPNYSPTSPSYSPTSPSYSPS SPTY+PSSP S +SP YSP S Y+PT P Y
Sbjct: 1791 SPNYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSY 1850
Query: 260 SPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 165
SPSS +YTP K T K + K +P
Sbjct: 1851 SPSSP-EYTP-TSPKYSPTSPKYSPTSPKYSP 1880
Score = 162 bits (411), Expect = 1e-38
Identities = 82/126 (65%), Positives = 96/126 (76%), Gaps = 6/126 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPT
Sbjct: 1836 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1895
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP+Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1896 SPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1955
Query: 248 TGQYTP 231
Y+P
Sbjct: 1956 P-TYSP 1960
Score = 157 bits (398), Expect = 5e-37
Identities = 81/121 (66%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
Y+P SPGYSPTSPSYSPTSPSY PTSP+Y+P S YSP+ SPS YSPTSP
Sbjct: 1612 YTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPT---SPS---------YSPTSP 1659
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYT 234
+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+
Sbjct: 1660 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYS 1718
Query: 233 P 231
P
Sbjct: 1719 P 1719
Score = 156 bits (395), Expect = 1e-36
Identities = 80/133 (60%), Positives = 96/133 (72%), Gaps = 6/133 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP YSPT
Sbjct: 1843 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1902
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP---DYSP-SAGYSPTLPGYSPSS 249
SP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP S GYSPT P YSP+
Sbjct: 1903 SPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSPA- 1961
Query: 248 TGQYTPHEGDKKD 210
+P + D+++
Sbjct: 1962 ---ISPDDSDEEN 1971
Score = 153 bits (387), Expect = 9e-36
Identities = 83/139 (59%), Positives = 95/139 (68%), Gaps = 19/139 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS----------------YSPTSPSYGPTSPSYNPQSAKYSP-SIAYS 462
+ SP YSPTSP+ YSPTSPSY PTSPSY+P S YSP S +YS
Sbjct: 1589 FGALSPNYSPTSPAYEPRSPGGGYTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYS 1648
Query: 461 PSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 288
P++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1649 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1708
Query: 287 GYSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1709 SYSPTSPSYSPTSP-SYSP 1726
Score = 153 bits (387), Expect = 9e-36
Identities = 83/130 (63%), Positives = 98/130 (75%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSP+Y+P S YSP S +YSPS+ R +P SP Y+P+
Sbjct: 1766 YSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1825
Query: 416 SPNYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
SP+YSP TSP Y+PTSPSYSPSSP Y+P+SP S SP YSP S YSPT P Y
Sbjct: 1826 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTY 1885
Query: 260 SPSSTGQYTP 231
SP +T +Y+P
Sbjct: 1886 SP-TTPKYSP 1894
Score = 137 bits (345), Expect = 6e-31
Identities = 77/124 (62%), Positives = 87/124 (70%), Gaps = 8/124 (6%)
Frame = -3
Query: 578 SPGY-----SPTSPSYSPTSPSYGPTSPS--YNPQSAKYSPSIAYSPSNARLSPASPYSP 420
SPGY SP+YSPTSP+Y P SP Y PQS YSP+ SPS + SP+ YSP
Sbjct: 1581 SPGYITLHFGALSPNYSPTSPAYEPRSPGGGYTPQSPGYSPT---SPSYSPTSPS--YSP 1635
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
TSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1636 TSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP- 1694
Query: 242 QYTP 231
Y+P
Sbjct: 1695 SYSP 1698
Score = 87.8 bits (216), Expect = 6e-16
Identities = 64/184 (34%), Positives = 75/184 (40%), Gaps = 66/184 (35%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI---------AYSPSNA------ 450
PT + S SP+ P + P +SPS+ +SPS A
Sbjct: 1495 PTGMFFGSAPSPMSGMSPAMTPWNTGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGF 1554
Query: 449 ----------------------------------------RLSPASP----------YSP 420
SP SP Y+P
Sbjct: 1555 SPGYSPAWSPTPGSPGSPGPASPYIPSPGYITLHFGALSPNYSPTSPAYEPRSPGGGYTP 1614
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
SP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1615 QSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP- 1673
Query: 242 QYTP 231
Y+P
Sbjct: 1674 SYSP 1677
Score = 78.6 bits (192), Expect = 3e-13
Identities = 62/153 (40%), Positives = 74/153 (48%), Gaps = 34/153 (22%)
Frame = -3
Query: 587 SPTSPGYSPT-SPSYSPTSPSYGPTSPSYN----PQSAKYSPSIA---------YSP--- 459
SP S G SP +P + +P+YG SPS P +A +SPS A YSP
Sbjct: 1505 SPMS-GMSPAMTPWNTGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWS 1563
Query: 458 ----SNARLSPASPYSPT-----------SPNYSPTSPSYSPTSPS--YSPSSPTYSPSS 330
S PASPY P+ SPNYSPTSP+Y P SP Y+P SP YSP+S
Sbjct: 1564 PTPGSPGSPGPASPYIPSPGYITLHFGALSPNYSPTSPAYEPRSPGGGYTPQSPGYSPTS 1623
Query: 329 PYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 231
P YSPT P YSP+S Y+P
Sbjct: 1624 P-------------SYSPTSPSYSPTSP-NYSP 1642
[17][TOP]
>UniRef100_A5DCV3 DNA-directed RNA polymerase II subunit RPB1 (Fragments) n=1
Tax=Pichia guilliermondii RepID=RPB1_PICGU
Length = 1579
Score = 176 bits (447), Expect = 9e-43
Identities = 91/131 (69%), Positives = 101/131 (77%), Gaps = 3/131 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1448 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPT 1507
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSP P YSP S
Sbjct: 1508 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPAYSPTSPQYSPNSPQYSPRSP-L 1566
Query: 239 YTPHEGDKKDK 207
Y+P + D KDK
Sbjct: 1567 YSPDQNDDKDK 1577
Score = 174 bits (440), Expect = 6e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1413 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1472
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1473 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1531
Query: 239 YTP 231
Y+P
Sbjct: 1532 YSP 1534
Score = 172 bits (437), Expect = 1e-41
Identities = 86/117 (73%), Positives = 95/117 (81%), Gaps = 3/117 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1385 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1444
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1445 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1501
Score = 167 bits (424), Expect = 4e-40
Identities = 86/123 (69%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y TSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1378 YGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1437
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1438 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1496
Query: 239 YTP 231
Y+P
Sbjct: 1497 YSP 1499
Score = 162 bits (411), Expect = 1e-38
Identities = 83/123 (67%), Positives = 94/123 (76%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y SPGY TSP+YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1371 YGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1430
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1431 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1489
Query: 239 YTP 231
Y+P
Sbjct: 1490 YSP 1492
Score = 154 bits (389), Expect = 5e-36
Identities = 79/123 (64%), Positives = 90/123 (73%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y TSP Y SP Y TSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1364 YGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1423
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1424 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1482
Query: 239 YTP 231
Y+P
Sbjct: 1483 YSP 1485
Score = 142 bits (357), Expect = 3e-32
Identities = 76/121 (62%), Positives = 88/121 (72%), Gaps = 2/121 (1%)
Frame = -3
Query: 587 SPTSP-GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
SPTSP Y TSP+Y SP YG TSP+Y+P S YSP+ SPS + SP+ YSPTSP
Sbjct: 1357 SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPT---SPSYSPTSPS--YSPTSP 1411
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYT 234
+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+
Sbjct: 1412 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYS 1470
Query: 233 P 231
P
Sbjct: 1471 P 1471
[18][TOP]
>UniRef100_UPI0000F24379 DNA-directed RNA polymerase II largest subunit (RNA polymerase II
subunit 1) (B220) n=1 Tax=Pichia stipitis CBS 6054
RepID=UPI0000F24379
Length = 1739
Score = 176 bits (446), Expect = 1e-42
Identities = 90/141 (63%), Positives = 107/141 (75%), Gaps = 3/141 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAG-YSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP++ YSPT P YSP+S Q
Sbjct: 1659 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPLYSPTSPQYSPTSP-Q 1717
Query: 239 YTPHEGDKKDKTGKKDASKDD 177
Y+P + + K + K++
Sbjct: 1718 YSPGSPEYSPNSPKTEDKKNE 1738
Score = 175 bits (444), Expect = 2e-42
Identities = 89/123 (72%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1571 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1630
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1631 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-Q 1689
Query: 239 YTP 231
Y+P
Sbjct: 1690 YSP 1692
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1550 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1609
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1610 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1668
Query: 239 YTP 231
Y+P
Sbjct: 1669 YSP 1671
Score = 168 bits (425), Expect = 3e-40
Identities = 86/123 (69%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y TSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1543 YGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1602
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1603 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1661
Query: 239 YTP 231
Y+P
Sbjct: 1662 YSP 1664
Score = 148 bits (374), Expect = 3e-34
Identities = 78/117 (66%), Positives = 86/117 (73%), Gaps = 1/117 (0%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSP 399
SPGY TSPSYSPTSPSY PTSPSY+P S YSP+ SPA YSPTSP+YSP
Sbjct: 1540 SPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPT----------SPA--YSPTSPSYSP 1587
Query: 398 TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
TSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1588 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1643
Score = 134 bits (336), Expect = 7e-30
Identities = 78/123 (63%), Positives = 88/123 (71%), Gaps = 5/123 (4%)
Frame = -3
Query: 584 PTSPGYSPTSP-SYSPTSPSYGPT-SPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
PTSP S TSP SY TSPS+G + SP Y S YSP S +YSP++ SP SP YSPT
Sbjct: 1517 PTSP--SATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1574
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1575 SPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1633
Query: 239 YTP 231
Y+P
Sbjct: 1634 YSP 1636
Score = 116 bits (290), Expect = 2e-24
Identities = 70/119 (58%), Positives = 78/119 (65%), Gaps = 2/119 (1%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSP-SYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNY 405
TS G PTSPS TSP SYG TSPS+ + SP SP+ YSPTSP+Y
Sbjct: 1511 TSYGGQPTSPS--ATSPFSYGSTSPSFGG---------SVSPGYGGTSPS--YSPTSPSY 1557
Query: 404 SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1558 SPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1615
[19][TOP]
>UniRef100_Q99366 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99366_SOYBN
Length = 625
Score = 176 bits (446), Expect = 1e-42
Identities = 81/86 (94%), Positives = 84/86 (97%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSPGYSPTSPSYSPTSPSY PTSPSYNPQSAKYSPS+AYSPS+ RLSP+SPYSPTSP
Sbjct: 517 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSP 576
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPS 333
NYSPTSPSYSPTSPSYSPSSPTYSPS
Sbjct: 577 NYSPTSPSYSPTSPSYSPSSPTYSPS 602
Score = 168 bits (425), Expect = 3e-40
Identities = 84/123 (68%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSPGYSPTSP YSPTSP+Y P+SP Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 384 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 443
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 444 SPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 502
Query: 239 YTP 231
Y+P
Sbjct: 503 YSP 505
Score = 164 bits (414), Expect = 6e-39
Identities = 91/136 (66%), Positives = 98/136 (72%), Gaps = 16/136 (11%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 468 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPT 527
Query: 416 SPNYSPTSPSYSPTSPSY-------------SPSSPTYSPSSPYSSGASPDYSP-SAGYS 279
SP+YSPTSPSYSPTSPSY SPSSP SPSSPYS SP+YSP S YS
Sbjct: 528 SPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSP-TSPNYSPTSPSYS 586
Query: 278 PTLPGYSPSSTGQYTP 231
PT P YSPSS Y+P
Sbjct: 587 PTSPSYSPSSP-TYSP 601
Score = 163 bits (413), Expect = 8e-39
Identities = 82/122 (67%), Positives = 94/122 (77%), Gaps = 2/122 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 454 YSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 513
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SP YSPTSP YSPTSPSYSP+SP+YSP+SP + S YSPS YSP+ P SPSS Y
Sbjct: 514 SPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSS--PY 571
Query: 236 TP 231
+P
Sbjct: 572 SP 573
Score = 160 bits (406), Expect = 5e-38
Identities = 84/124 (67%), Positives = 95/124 (76%), Gaps = 4/124 (3%)
Frame = -3
Query: 590 YSPTS-PGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSP 420
+SPTS PGYSP+SP YSP+SP Y PTSP Y+P S YSP S YSPS+ SP SP YSP
Sbjct: 362 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 421
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 422 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSP- 480
Query: 242 QYTP 231
Y+P
Sbjct: 481 SYSP 484
Score = 83.2 bits (204), Expect = 1e-14
Identities = 56/119 (47%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
Frame = -3
Query: 572 GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPS-NARLSP---ASPYSPTSPNY 405
G +P S T G SPSY SP++ SP+ +A+ SP +SPTS
Sbjct: 315 GMTPARSPISGTPYHEGLMSPSY-----LLSPNLRLSPTTDAQFSPYVGGMAFSPTS--- 366
Query: 404 SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP YSP+SP YSPSSP YSP+SP S SP YSP S YSP+ PGYSP+S Y+P
Sbjct: 367 ---SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 421
[20][TOP]
>UniRef100_Q6FQS9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FQS9_CANGA
Length = 1715
Score = 176 bits (446), Expect = 1e-42
Identities = 93/138 (67%), Positives = 104/138 (75%), Gaps = 5/138 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1578 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1638 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1696
Query: 239 YTPHEG--DKKDKTGKKD 192
Y+P KD+ KKD
Sbjct: 1697 YSPGSPTYSPKDEDEKKD 1714
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1550 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1609
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1610 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1668
Query: 239 YTP 231
Y+P
Sbjct: 1669 YSP 1671
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1557 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1616
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1617 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1675
Query: 239 YTP 231
Y+P
Sbjct: 1676 YSP 1678
Score = 172 bits (435), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
+SPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1543 FSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1602
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1603 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1661
Query: 239 YTP 231
Y+P
Sbjct: 1662 YSP 1664
Score = 164 bits (416), Expect = 4e-39
Identities = 83/120 (69%), Positives = 96/120 (80%), Gaps = 3/120 (2%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTSPN 408
+SPG+SPTSP+YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPTSP+
Sbjct: 1539 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1598
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1657
Score = 105 bits (262), Expect = 3e-21
Identities = 60/100 (60%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Frame = -3
Query: 524 GPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSP 348
G TSP A SP S+ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP
Sbjct: 1518 GATSPFGAYGDAPASPGFG-GVSSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP 1576
Query: 347 TYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1577 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1615
Score = 79.3 bits (194), Expect = 2e-13
Identities = 58/127 (45%), Positives = 68/127 (53%), Gaps = 14/127 (11%)
Frame = -3
Query: 569 YSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP---------YSPT 417
+SP + S + S G T+ SP AY + PASP +SPT
Sbjct: 1492 FSPLVDAGSSDAMSGGFTAYGGAEYGGATSPFGAYGDA-----PASPGFGGVSSPGFSPT 1546
Query: 416 SPNYSPTSPSYSPTSPSYSPSSP----TYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
SP YSPTSPSYSPTSPSYS +YSP+SP S SP YSP S YSPT P YSP+
Sbjct: 1547 SPAYSPTSPSYSPTSPSYS----PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1602
Query: 251 STGQYTP 231
S Y+P
Sbjct: 1603 SP-SYSP 1608
[21][TOP]
>UniRef100_C5DXL0 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DXL0_ZYGRC
Length = 1744
Score = 176 bits (446), Expect = 1e-42
Identities = 90/131 (68%), Positives = 100/131 (76%), Gaps = 3/131 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1608 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP S
Sbjct: 1668 SPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPGSP-T 1726
Query: 239 YTPHEGDKKDK 207
Y+P + D+
Sbjct: 1727 YSPSSPKQDDR 1737
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1626 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-S 1684
Query: 239 YTP 231
Y+P
Sbjct: 1685 YSP 1687
Score = 171 bits (433), Expect = 4e-41
Identities = 87/123 (70%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP SP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1559 YSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1619 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP-S 1677
Query: 239 YTP 231
Y+P
Sbjct: 1678 YSP 1680
Score = 170 bits (430), Expect = 9e-41
Identities = 86/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSP SP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1545 YSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1605 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1663
Query: 239 YTP 231
Y+P
Sbjct: 1664 YSP 1666
Score = 166 bits (420), Expect = 1e-39
Identities = 84/123 (68%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
+SP+SP YSPTSPSYSPTSPSY P SP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1538 FSPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1597
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1598 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1656
Query: 239 YTP 231
Y+P
Sbjct: 1657 YSP 1659
Score = 163 bits (412), Expect = 1e-38
Identities = 82/120 (68%), Positives = 96/120 (80%), Gaps = 3/120 (2%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTSPN 408
+SPG+SP+SP+YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPTSP+
Sbjct: 1534 SSPGFSPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1593
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1594 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1652
Score = 146 bits (369), Expect = 1e-33
Identities = 71/98 (72%), Positives = 78/98 (79%), Gaps = 2/98 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
SP+YSPTSPSYSPTSP+YSP SPTYSPSSP D
Sbjct: 1703 SPSYSPTSPSYSPTSPNYSPGSPTYSPSSPKQDDREKD 1740
[22][TOP]
>UniRef100_UPI00005A0B2C PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 23 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2C
Length = 1888
Score = 176 bits (445), Expect = 2e-42
Identities = 94/148 (63%), Positives = 108/148 (72%), Gaps = 6/148 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA----GYSPTLPGYSPSS 249
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS+ Y+PT P YSPSS
Sbjct: 1709 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSS 1768
Query: 248 TGQYTPHEGDKKDKTGKKDASKDDKGNP 165
+YTP K T K + K +P
Sbjct: 1769 P-EYTP-TSPKYSPTSPKYSPTSPKYSP 1794
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1688 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1746
Query: 239 YTP 231
Y+P
Sbjct: 1747 YSP 1749
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1674 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1732
Query: 239 YTP 231
Y+P
Sbjct: 1733 YSP 1735
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1667 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1725
Query: 239 YTP 231
Y+P
Sbjct: 1726 YSP 1728
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1592 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1651
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1652 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1711
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1712 YSPTSP-SYSP 1721
Score = 160 bits (405), Expect = 7e-38
Identities = 83/126 (65%), Positives = 94/126 (74%), Gaps = 6/126 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPY---- 426
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1750
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SPTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1751 SPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1810
Query: 248 TGQYTP 231
Y+P
Sbjct: 1811 P-TYSP 1815
Score = 158 bits (400), Expect = 3e-37
Identities = 79/119 (66%), Positives = 91/119 (76%), Gaps = 6/119 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 414
SPTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPTS
Sbjct: 1751 SPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1810
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
P YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1811 PTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1869
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1757 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1816
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1817 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1873
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1874 LTSPA-ISPDDSDEEN 1888
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1570 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1629
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1630 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1690 SYSPTSP-SYSP 1700
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1557 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1616
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1617 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1676
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1677 YSPTSPSYSPTSP-SYSP 1693
Score = 59.7 bits (143), Expect = 2e-07
Identities = 52/128 (40%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Frame = -3
Query: 572 GYSPT-SPSYSPTSPSYGP---TSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT-SPN 408
G SP +P +P+Y P P +A +SPS A S AS +SP SP
Sbjct: 1512 GISPAMTPWNQGATPAYDPDPGAGSGMTPGAAGFSPSAA--------SDASGFSPGYSPA 1563
Query: 407 YSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGASP-DYSP-SAGYSPTLPGYSP 255
+SPT S PS Y PS SP+YSP+SP SP Y+P S YSPT P YSP
Sbjct: 1564 WSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSP 1623
Query: 254 SSTGQYTP 231
+S Y+P
Sbjct: 1624 TSP-SYSP 1630
[23][TOP]
>UniRef100_UPI00003BD271 hypothetical protein DEHA0A14036g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BD271
Length = 1749
Score = 176 bits (445), Expect = 2e-42
Identities = 89/123 (72%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1593 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1653 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSP-Q 1711
Query: 239 YTP 231
Y+P
Sbjct: 1712 YSP 1714
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1558 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1617
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1618 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1676
Query: 239 YTP 231
Y+P
Sbjct: 1677 YSP 1679
Score = 167 bits (424), Expect = 4e-40
Identities = 86/123 (69%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y TSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1551 YGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1610
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1611 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1669
Query: 239 YTP 231
Y+P
Sbjct: 1670 YSP 1672
Score = 162 bits (409), Expect = 2e-38
Identities = 86/137 (62%), Positives = 95/137 (69%), Gaps = 2/137 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1687
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP + P YSP
Sbjct: 1688 SPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPGS------PLYSP------ 1735
Query: 236 TPHEGDKKDKTGKKDAS 186
E + K K KKD +
Sbjct: 1736 ---ESESKSKDEKKDGN 1749
Score = 139 bits (349), Expect = 2e-31
Identities = 77/122 (63%), Positives = 89/122 (72%), Gaps = 3/122 (2%)
Frame = -3
Query: 587 SPTSP-GYSPTSPSYSP-TSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTS 414
SPTSP Y TSPS+ TSP YG TSP+Y+P S YSP+ SPS + SP+ YSPTS
Sbjct: 1529 SPTSPFSYGATSPSFGGVTSPGYGGTSPTYSPTSPSYSPT---SPSYSPTSPS--YSPTS 1583
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQY 237
P+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y
Sbjct: 1584 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SY 1642
Query: 236 TP 231
+P
Sbjct: 1643 SP 1644
Score = 112 bits (281), Expect = 2e-23
Identities = 67/112 (59%), Positives = 75/112 (66%), Gaps = 2/112 (1%)
Frame = -3
Query: 560 TSPSYSPTSP-SYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSY 384
TSPS PTSP SYG TSPS+ + SP SP YSPTSP+YSPTSPSY
Sbjct: 1526 TSPS--PTSPFSYGATSPSFGGVT---------SPGYGGTSPT--YSPTSPSYSPTSPSY 1572
Query: 383 SPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1573 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1623
[24][TOP]
>UniRef100_B5RSM9 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RSM9_DEBHA
Length = 1749
Score = 176 bits (445), Expect = 2e-42
Identities = 89/123 (72%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1593 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1653 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSP-Q 1711
Query: 239 YTP 231
Y+P
Sbjct: 1712 YSP 1714
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1558 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1617
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1618 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1676
Query: 239 YTP 231
Y+P
Sbjct: 1677 YSP 1679
Score = 167 bits (424), Expect = 4e-40
Identities = 86/123 (69%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y TSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1551 YGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1610
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1611 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1669
Query: 239 YTP 231
Y+P
Sbjct: 1670 YSP 1672
Score = 163 bits (413), Expect = 8e-39
Identities = 86/137 (62%), Positives = 95/137 (69%), Gaps = 2/137 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPT 1687
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP + P YSP
Sbjct: 1688 SPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPGS------PSYSP------ 1735
Query: 236 TPHEGDKKDKTGKKDAS 186
E + K K KKD +
Sbjct: 1736 ---ESESKSKDEKKDGN 1749
Score = 139 bits (349), Expect = 2e-31
Identities = 77/122 (63%), Positives = 89/122 (72%), Gaps = 3/122 (2%)
Frame = -3
Query: 587 SPTSP-GYSPTSPSYSP-TSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTS 414
SPTSP Y TSPS+ TSP YG TSP+Y+P S YSP+ SPS + SP+ YSPTS
Sbjct: 1529 SPTSPFSYGATSPSFGGVTSPGYGGTSPTYSPTSPSYSPT---SPSYSPTSPS--YSPTS 1583
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQY 237
P+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y
Sbjct: 1584 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SY 1642
Query: 236 TP 231
+P
Sbjct: 1643 SP 1644
Score = 112 bits (281), Expect = 2e-23
Identities = 67/112 (59%), Positives = 75/112 (66%), Gaps = 2/112 (1%)
Frame = -3
Query: 560 TSPSYSPTSP-SYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSY 384
TSPS PTSP SYG TSPS+ + SP SP YSPTSP+YSPTSPSY
Sbjct: 1526 TSPS--PTSPFSYGATSPSFGGVT---------SPGYGGTSPT--YSPTSPSYSPTSPSY 1572
Query: 383 SPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1573 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1623
[25][TOP]
>UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E6J4_LODEL
Length = 1745
Score = 176 bits (445), Expect = 2e-42
Identities = 89/123 (72%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1596 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1655
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1656 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSP-Q 1714
Query: 239 YTP 231
Y+P
Sbjct: 1715 YSP 1717
Score = 164 bits (416), Expect = 4e-39
Identities = 94/144 (65%), Positives = 103/144 (71%), Gaps = 11/144 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1603 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1662
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS---SGASPDYSP-SAGYSPTLPGY 261
SP+YSPTSPSYSPTSPSYSP+SP YSP SP S S SP YSP S YSPT P Y
Sbjct: 1663 SPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQY 1722
Query: 260 SPSSTGQYTPHEGDKKDKT-GKKD 192
SP S Y+P + K K+ KKD
Sbjct: 1723 SPRSP-NYSPKSPEYKPKSPSKKD 1745
Score = 160 bits (404), Expect = 9e-38
Identities = 83/121 (68%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP+ SPS YSPTSP
Sbjct: 1540 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT---SPS---------YSPTSP 1587
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYT 234
+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+
Sbjct: 1588 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYS 1646
Query: 233 P 231
P
Sbjct: 1647 P 1647
Score = 138 bits (348), Expect = 3e-31
Identities = 75/120 (62%), Positives = 84/120 (70%), Gaps = 3/120 (2%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSPSYG--PTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
T+PGY TSP Y TSP YG PTSPSY+P S YSP+ SPS YSPTSP+
Sbjct: 1520 TTPGYGGTSPGYGGTSPGYGYSPTSPSYSPTSPSYSPT---SPS---------YSPTSPS 1567
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1568 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1626
[26][TOP]
>UniRef100_C4Y5N3 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y5N3_CLAL4
Length = 281
Score = 175 bits (444), Expect = 2e-42
Identities = 89/123 (72%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 132 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 191
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 192 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-Q 250
Query: 239 YTP 231
Y+P
Sbjct: 251 YSP 253
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 83 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 142
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 143 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 201
Query: 239 YTP 231
Y+P
Sbjct: 202 YSP 204
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 90 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 149
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 150 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 208
Query: 239 YTP 231
Y+P
Sbjct: 209 YSP 211
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 111 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 170
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 171 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 229
Query: 239 YTP 231
Y+P
Sbjct: 230 YSP 232
Score = 173 bits (439), Expect = 8e-42
Identities = 91/134 (67%), Positives = 100/134 (74%), Gaps = 3/134 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 153 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 212
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSP P YSP S
Sbjct: 213 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPGSPSYSPRS--- 269
Query: 239 YTPHEGDKKDKTGK 198
P GDKK+ K
Sbjct: 270 --PSYGDKKEDEKK 281
Score = 167 bits (424), Expect = 4e-40
Identities = 86/123 (69%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y TSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 76 YGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 135
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 136 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 194
Query: 239 YTP 231
Y+P
Sbjct: 195 YSP 197
Score = 162 bits (411), Expect = 1e-38
Identities = 83/120 (69%), Positives = 94/120 (78%), Gaps = 3/120 (2%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTSPN 408
TSPGY TSP+YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPTSP+
Sbjct: 72 TSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 131
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 132 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 190
Score = 110 bits (275), Expect = 8e-23
Identities = 68/121 (56%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSP-SYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
S TS G P+ S PTSP SYG SP++ A SP SP YSPTSP
Sbjct: 42 SLTSYGGQPSMTS--PTSPFSYGGASPAFGG---------ATSPGYGGTSPT--YSPTSP 88
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYT 234
+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+
Sbjct: 89 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYS 147
Query: 233 P 231
P
Sbjct: 148 P 148
[27][TOP]
>UniRef100_B7PJA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
RepID=B7PJA3_IXOSC
Length = 1937
Score = 175 bits (443), Expect = 3e-42
Identities = 89/123 (72%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSPSSP + ASP YSP S YSPT P YSP+S
Sbjct: 1695 SPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSP-S 1753
Query: 239 YTP 231
Y+P
Sbjct: 1754 YSP 1756
Score = 174 bits (442), Expect = 4e-42
Identities = 92/136 (67%), Positives = 100/136 (73%), Gaps = 16/136 (11%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSPS+ +PASP
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPT 1736
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGY 261
YSPTSP+YSPTSPSYSPTSPSYSPSSP YSP SP S SP YSPS+ YSPT P Y
Sbjct: 1737 SPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSY 1796
Query: 260 SPSS------TGQYTP 231
SP+S + QYTP
Sbjct: 1797 SPTSPSYSPGSPQYTP 1812
Score = 173 bits (438), Expect = 1e-41
Identities = 87/123 (70%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP+Y+P S YSPT P YSP+S
Sbjct: 1688 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSP-S 1746
Query: 239 YTP 231
Y+P
Sbjct: 1747 YSP 1749
Score = 169 bits (429), Expect = 1e-40
Identities = 85/123 (69%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSP+ P Y+P+S
Sbjct: 1674 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASP-S 1732
Query: 239 YTP 231
Y+P
Sbjct: 1733 YSP 1735
Score = 167 bits (424), Expect = 4e-40
Identities = 84/126 (66%), Positives = 97/126 (76%), Gaps = 6/126 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P+SP YSPTSP+YSPTSPSY P+SP Y+P S KYSP S Y+PS+ + SP SP YSPT
Sbjct: 1810 YTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPT 1869
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP YSPTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSPSS
Sbjct: 1870 SPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSPGYSPSS 1929
Query: 248 TGQYTP 231
Y+P
Sbjct: 1930 P-TYSP 1934
Score = 164 bits (415), Expect = 5e-39
Identities = 84/123 (68%), Positives = 93/123 (75%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSPSY+P S YSPS YSP + SP SP YSP+
Sbjct: 1726 YTPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPS 1785
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSPSYSPTSPSYSP SP Y+PSSP S SP YSP S YSP+ P YSP+S +
Sbjct: 1786 SPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPTSP-K 1844
Query: 239 YTP 231
Y+P
Sbjct: 1845 YSP 1847
Score = 163 bits (413), Expect = 8e-39
Identities = 82/123 (66%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P+SP +P SP+YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1600 YAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPT 1659
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1660 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1718
Query: 239 YTP 231
Y+P
Sbjct: 1719 YSP 1721
Score = 162 bits (411), Expect = 1e-38
Identities = 83/130 (63%), Positives = 98/130 (75%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSPSYSPTSPSY P+SP+Y+PQS YSP S +YSPS+ + SP SP
Sbjct: 1740 YSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPT 1799
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
YSP SP Y+P+SP YSPTSP+YSP+SP+YSPSSP S SP YSP S Y+P+ P Y
Sbjct: 1800 SPSYSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKY 1859
Query: 260 SPSSTGQYTP 231
SP+S QY+P
Sbjct: 1860 SPTSP-QYSP 1868
Score = 160 bits (406), Expect = 5e-38
Identities = 81/123 (65%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP+SP Y+P+SPS +P SP+Y PTSPSY+P S YSP S YSP++ SP SP YSPT
Sbjct: 1593 YSPSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPT 1652
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1653 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1711
Query: 239 YTP 231
Y+P
Sbjct: 1712 YSP 1714
Score = 160 bits (404), Expect = 9e-38
Identities = 79/116 (68%), Positives = 89/116 (76%), Gaps = 2/116 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSP+SP YSPTSP Y PTSP+Y P S KYSP S YSP++ + SP SP YSPT
Sbjct: 1824 YSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPT 1883
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
SP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSP+ P YSP+S
Sbjct: 1884 SPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSP---TSPGYSPSSPTYSPTS 1936
Score = 145 bits (365), Expect = 3e-33
Identities = 75/120 (62%), Positives = 87/120 (72%), Gaps = 1/120 (0%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
SP SP YSP+SP+Y+P+SPS P SP+Y+P S YSP+ SPS YSPTSPN
Sbjct: 1587 SPVSPNYSPSSPAYAPSSPSMTPASPTYSPTSPSYSPT---SPS---------YSPTSPN 1634
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1693
Score = 135 bits (341), Expect = 2e-30
Identities = 68/100 (68%), Positives = 78/100 (78%), Gaps = 5/100 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+Y+P+SP Y PTSP Y+P S +YSP S YSP++ + SP SP YSPT
Sbjct: 1838 YSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPT 1897
Query: 416 SPNYSPTSPSYSPTSP---SYSPSSPTYSPSSPYSSGASP 306
SP YSPTSP+YSPTSP SYSP+SP YSPSSP S SP
Sbjct: 1898 SPKYSPTSPTYSPTSPKGSSYSPTSPGYSPSSPTYSPTSP 1937
Score = 122 bits (305), Expect = 3e-26
Identities = 72/143 (50%), Positives = 89/143 (62%), Gaps = 24/143 (16%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTS----PSYNPQ-----------------SAKYSPSI 471
S +PG + SPS + + Y P S P ++PQ S YSPS
Sbjct: 1538 SGMTPGAAGFSPSAASDASGYSPASAGLSPGWSPQPGSPASSPASPYIPSPVSPNYSPSS 1597
Query: 470 -AYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 297
AY+PS+ ++PASP YSPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YS
Sbjct: 1598 PAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYS 1657
Query: 296 P-SAGYSPTLPGYSPSSTGQYTP 231
P S YSPT P YSP+S Y+P
Sbjct: 1658 PTSPSYSPTSPSYSPTSP-SYSP 1679
Score = 113 bits (283), Expect = 1e-23
Identities = 63/120 (52%), Positives = 78/120 (65%), Gaps = 4/120 (3%)
Frame = -3
Query: 578 SPGY-SPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPY--SPTSPN 408
SPG S +P + SPS + Y+P SA SP + P + SPASPY SP SPN
Sbjct: 1533 SPGLGSGMTPGAAGFSPSAASDASGYSPASAGLSPGWSPQPGSPASSPASPYIPSPVSPN 1592
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSP+SP+Y+P+SPS +P+SPTYSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1593 YSPSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-SYSP 1651
[28][TOP]
>UniRef100_B4E3V7 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4E3V7_HUMAN
Length = 1935
Score = 175 bits (443), Expect = 3e-42
Identities = 89/123 (72%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1661 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP-N 1719
Query: 239 YTP 231
YTP
Sbjct: 1720 YTP 1722
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP S Y+PT P YSP+S
Sbjct: 1675 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP-S 1733
Query: 239 YTP 231
Y+P
Sbjct: 1734 YSP 1736
Score = 171 bits (433), Expect = 4e-41
Identities = 85/123 (69%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y+P S Y+P S +YSP++ SP SP Y+PT
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1744
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PS+ YSP+ P YSP+S +
Sbjct: 1745 SPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSP-K 1803
Query: 239 YTP 231
YTP
Sbjct: 1804 YTP 1806
Score = 170 bits (431), Expect = 7e-41
Identities = 87/123 (70%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTS YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1594 YSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1712
Query: 239 YTP 231
Y+P
Sbjct: 1713 YSP 1715
Score = 169 bits (428), Expect = 2e-40
Identities = 86/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTS +Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1639
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1640 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1698
Query: 239 YTP 231
Y+P
Sbjct: 1699 YSP 1701
Score = 166 bits (419), Expect = 2e-39
Identities = 87/131 (66%), Positives = 99/131 (75%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S+ YSP S +YSP++ SP
Sbjct: 1558 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSP 1617
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1618 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1678 YSPTSP-SYSP 1687
Score = 166 bits (419), Expect = 2e-39
Identities = 84/123 (68%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTS +Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1573 YTPQSPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1633 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1691
Query: 239 YTP 231
Y+P
Sbjct: 1692 YSP 1694
Score = 160 bits (404), Expect = 9e-38
Identities = 82/130 (63%), Positives = 97/130 (74%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSP+Y+PTSP+Y PTSPSY+P S YSP S +YSPS+ R +P SP
Sbjct: 1727 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1786
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
YSP+SP+YSPTSP Y+PTSP YSPSSP Y+P+SP S SP YSP S YSPT P Y
Sbjct: 1787 SPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPTGPTY 1846
Query: 260 SPSSTGQYTP 231
SP +T +Y+P
Sbjct: 1847 SP-TTPKYSP 1855
Score = 157 bits (398), Expect = 5e-37
Identities = 78/120 (65%), Positives = 90/120 (75%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP Y+PTSP YSP+SP Y PTSP ++P S KYSP S YSP+ SP +P YSPT
Sbjct: 1797 YSPTSPKYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPTGPTYSPTTPKYSPT 1856
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1857 SPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1916
Score = 149 bits (375), Expect = 2e-34
Identities = 76/136 (55%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS-IAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP + PTSP Y+P S KYSP+ YSP+ + SP SP
Sbjct: 1804 YTPTSPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSPT 1863
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1864 SPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1920
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1921 LTSPA-ISPDDSDEEN 1935
Score = 126 bits (317), Expect = 1e-27
Identities = 77/138 (55%), Positives = 87/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1523 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1582
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTS NYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1583 TSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1642
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1643 YSPTSPSYSPTSP-SYSP 1659
Score = 95.5 bits (236), Expect = 3e-18
Identities = 61/140 (43%), Positives = 81/140 (57%), Gaps = 24/140 (17%)
Frame = -3
Query: 578 SPGYSP----TSPSYSPTSPSYG----PTSPSYNPQSAK--------YSPSIAYSP-SNA 450
SP +P +P+Y SPS G P + ++P +A YSP+ + +P S
Sbjct: 1479 SPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPG 1538
Query: 449 RLSPASPYSPT-----SPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGASPDYSP-S 291
P+SPY P+ SP+YSPTSP+Y P SP Y+P SP+YSP+SP S SP YSP S
Sbjct: 1539 SPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTS 1598
Query: 290 AGYSPTLPGYSPSSTGQYTP 231
+ YSPT P YSP+S Y+P
Sbjct: 1599 SNYSPTSPSYSPTSP-SYSP 1617
[29][TOP]
>UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WN64_CANDC
Length = 1735
Score = 175 bits (443), Expect = 3e-42
Identities = 89/123 (72%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1571 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPT 1630
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1631 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSP-Q 1689
Query: 239 YTP 231
Y+P
Sbjct: 1690 YSP 1692
Score = 174 bits (441), Expect = 5e-42
Identities = 89/123 (72%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1543 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1602
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1603 SPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-Q 1661
Query: 239 YTP 231
Y+P
Sbjct: 1662 YSP 1664
Score = 174 bits (441), Expect = 5e-42
Identities = 90/136 (66%), Positives = 102/136 (75%), Gaps = 3/136 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S +
Sbjct: 1659 SPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSP-R 1717
Query: 239 YTPHEGDKKDKTGKKD 192
Y+P + K+ KKD
Sbjct: 1718 YSPGSPGYEPKSPKKD 1733
Score = 163 bits (413), Expect = 8e-39
Identities = 84/123 (68%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+ GYSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1536 YASPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1595
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1596 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1654
Query: 239 YTP 231
Y+P
Sbjct: 1655 YSP 1657
Score = 140 bits (352), Expect = 1e-31
Identities = 67/94 (71%), Positives = 73/94 (77%), Gaps = 2/94 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP Y PTSPSY+P S +YSP S +YSP++ + SP SP YSPT
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPT 1700
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 315
SP YSPTSP YSPTSP YSP SP Y P SP G
Sbjct: 1701 SPQYSPTSPQYSPTSPRYSPGSPGYEPKSPKKDG 1734
Score = 133 bits (334), Expect = 1e-29
Identities = 72/118 (61%), Positives = 80/118 (67%), Gaps = 1/118 (0%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYS 402
TSPGY+ YSPTSPSY PTSPSY+P SPS YSPTSP+YS
Sbjct: 1532 TSPGYASPGYGYSPTSPSYSPTSPSYSPT----------SPS---------YSPTSPSYS 1572
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
PTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S G Y+P
Sbjct: 1573 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPG-YSP 1629
Score = 106 bits (265), Expect = 1e-21
Identities = 64/104 (61%), Positives = 73/104 (70%), Gaps = 4/104 (3%)
Frame = -3
Query: 530 SYG--PTSPSY-NPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYS 360
SYG PTSP+ +P S Y+ A SP A SP YSPTSP+YSPTSPSYSPTSPSYS
Sbjct: 1510 SYGGQPTSPAATSPFSFGYNT--ATSPGYA--SPGYGYSPTSPSYSPTSPSYSPTSPSYS 1565
Query: 359 PSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1566 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1608
[30][TOP]
>UniRef100_Q30BD9 DNA-directed RNA polymerase n=1 Tax=Glaucocystis nostochinearum
RepID=Q30BD9_9EUKA
Length = 1852
Score = 174 bits (441), Expect = 5e-42
Identities = 87/117 (74%), Positives = 94/117 (80%), Gaps = 3/117 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSPGYSPTSPSYSPTSP Y PTSPSY+P S YSP S YSP++ SP SP YSPT
Sbjct: 1623 YSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPT 1682
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSPSS
Sbjct: 1683 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPSS 1739
Score = 171 bits (434), Expect = 3e-41
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1651 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1710
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SP+ SPTSPSYSPTSPSYSP+SP+YSPSSP S ASP YSPS+ YSP+ P YSPSS
Sbjct: 1711 SPSCSPTSPSYSPTSPSYSPTSPSYSPSSPSCSPASPTYSPSSPSYSPSSPSYSPSSP-S 1769
Query: 239 YTP 231
Y+P
Sbjct: 1770 YSP 1772
Score = 165 bits (418), Expect = 2e-39
Identities = 87/130 (66%), Positives = 100/130 (76%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1665 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPT 1724
Query: 416 SPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGY 261
SP+YSPTSPSYSP+SPS YSPSSP+YSPSSP S +SP YSPS+ YSP+ P Y
Sbjct: 1725 SPSYSPTSPSYSPSSPSCSPASPTYSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPQY 1784
Query: 260 SPSSTGQYTP 231
+P+S Y+P
Sbjct: 1785 TPAS-ANYSP 1793
Score = 163 bits (412), Expect = 1e-38
Identities = 87/134 (64%), Positives = 98/134 (73%), Gaps = 14/134 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPS PTSPSY+P S YSP S +YSPS+ SPASP YSP+
Sbjct: 1693 YSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPSSPSCSPASPTYSPS 1752
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS------------PDYSPSAGYSPT 273
SP+YSP+SPSYSP+SPSYSPSSP+YSPSSP + AS P YSP++ YSPT
Sbjct: 1753 SPSYSPSSPSYSPSSPSYSPSSPSYSPSSPQYTPASANYSPPSPLHSSPAYSPTSQYSPT 1812
Query: 272 LPGYSPSSTGQYTP 231
P Y SS YTP
Sbjct: 1813 SPAYGASSPA-YTP 1825
Score = 158 bits (400), Expect = 3e-37
Identities = 81/123 (65%), Positives = 91/123 (73%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP SP YS SP YSPTSP Y +SPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1560 YSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1619
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP S GYSPT P YSP+S
Sbjct: 1620 SPSYSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSP-S 1678
Query: 239 YTP 231
Y+P
Sbjct: 1679 YSP 1681
Score = 142 bits (358), Expect = 2e-32
Identities = 78/132 (59%), Positives = 90/132 (68%), Gaps = 18/132 (13%)
Frame = -3
Query: 572 GYSPTSPSYSP--------TSPSYGPTSPSYNPQSAKYSP--------SIAYSPSNARLS 441
GYSP+SP YSP SPSY P SPSY+ S +YSP S +YSP++ S
Sbjct: 1537 GYSPSSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYS 1596
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSP+YSPTSPSYSP+SP YSP+SP S SP YSP S YSPT P
Sbjct: 1597 PTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSP 1656
Query: 266 GYSPSSTGQYTP 231
YSP+S G Y+P
Sbjct: 1657 SYSPTSPG-YSP 1667
Score = 139 bits (351), Expect = 1e-31
Identities = 75/122 (61%), Positives = 87/122 (71%), Gaps = 2/122 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYS-PTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTS 414
YSP+SP YSP SP + SPSY P SPSY+ S +YSP+ SP + SP+ YSPTS
Sbjct: 1538 YSPSSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPT---SPGYSASSPS--YSPTS 1592
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQY 237
P+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP S YSPT P YSP+S Y
Sbjct: 1593 PSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSPRYSPTSP-SY 1651
Query: 236 TP 231
+P
Sbjct: 1652 SP 1653
Score = 127 bits (320), Expect = 5e-28
Identities = 71/123 (57%), Positives = 85/123 (69%), Gaps = 4/123 (3%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYN-PQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
SP G YSP+SP Y P SP ++ S YSP S +YS ++ R SP SP YS +
Sbjct: 1525 SPFVDGSFSPHRGYSPSSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSAS 1584
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S GYSPT P YSP+S +
Sbjct: 1585 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSP-R 1643
Query: 239 YTP 231
Y+P
Sbjct: 1644 YSP 1646
Score = 125 bits (315), Expect = 2e-27
Identities = 69/128 (53%), Positives = 88/128 (68%), Gaps = 3/128 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP-YSPT 417
YSPTSP YSP+SPS SP SP+Y P+SPSY+P S YSPS +YSPS+ SP+SP Y+P
Sbjct: 1728 YSPTSPSYSPSSPSCSPASPTYSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPQYTPA 1787
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSP-TLPGYSPSSTGQ 240
S NYSP SP +S SP+YSP+S YSP+SP +SP Y+P + SP +LP + S Q
Sbjct: 1788 SANYSPPSPLHS--SPAYSPTS-QYSPTSPAYGASSPAYTPQSNLSPASLPSPALSPVSQ 1844
Query: 239 YTPHEGDK 216
+P + K
Sbjct: 1845 KSPPQDRK 1852
Score = 88.6 bits (218), Expect = 3e-16
Identities = 59/128 (46%), Positives = 68/128 (53%), Gaps = 16/128 (12%)
Frame = -3
Query: 566 SPT--SPSYSPTSPSYGPT---SPSYNP--QSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
SPT SP +P P SP P A +SP + SP YSP+SP
Sbjct: 1485 SPTIGSPQMTPYDTHMTPALQQSPGGTPFLDGATFSPYAESPFVDGSFSPHRGYSPSSPP 1544
Query: 407 YSP--------TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSP 255
YSP SPSYSP SPSYS +SP YSP+SP S +SP YSP S YSPT P YSP
Sbjct: 1545 YSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSP 1604
Query: 254 SSTGQYTP 231
+S Y+P
Sbjct: 1605 TSP-SYSP 1611
[31][TOP]
>UniRef100_UPI0000E48673 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48673
Length = 1880
Score = 174 bits (440), Expect = 6e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSPGYSP SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1577 YSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1636
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1637 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1695
Query: 239 YTP 231
Y+P
Sbjct: 1696 YSP 1698
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1678
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPS+ YSPT P YSP+S
Sbjct: 1679 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSP-S 1737
Query: 239 YTP 231
Y+P
Sbjct: 1738 YSP 1740
Score = 172 bits (437), Expect = 1e-41
Identities = 89/123 (72%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1699
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSP S YSP P YSPSS +
Sbjct: 1700 SPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSP-K 1758
Query: 239 YTP 231
Y+P
Sbjct: 1759 YSP 1761
Score = 170 bits (430), Expect = 9e-41
Identities = 86/123 (69%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSP SPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1570 YSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1630 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1688
Query: 239 YTP 231
Y+P
Sbjct: 1689 YSP 1691
Score = 169 bits (429), Expect = 1e-40
Identities = 86/123 (69%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSP+SP Y PTSPSY+P S YSP S +YSP + SP+SP YSPT
Sbjct: 1703 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPT 1762
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSP++SPSSPTYSP+SP S SP YSPS+ YSPT P YSP+S +
Sbjct: 1763 SPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSP-K 1821
Query: 239 YTP 231
Y+P
Sbjct: 1822 YSP 1824
Score = 160 bits (406), Expect = 5e-38
Identities = 81/126 (64%), Positives = 95/126 (75%), Gaps = 6/126 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP-YSPT 417
YSP SP YSP+SP YSPTSPSY PTSPSY+P S +SPS YSP++ SP SP YSP+
Sbjct: 1745 YSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPS 1804
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP+YSPTSP YSP+SPTYSP+SP S +SP YSP+ + YSPT P YSP+S
Sbjct: 1805 SPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPTSPSYSPTS 1864
Query: 248 TGQYTP 231
Y+P
Sbjct: 1865 P-SYSP 1869
Score = 160 bits (406), Expect = 5e-38
Identities = 82/118 (69%), Positives = 92/118 (77%), Gaps = 2/118 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP++ P+SP+Y+P S YSP S YSPS+ + SP SP YSPT
Sbjct: 1759 YSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPT 1818
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTG 243
SP YSP SP+YSPTSP YSPSSPTYSP+SP S SP SPS YSPT P YSP+S G
Sbjct: 1819 SPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPT-SPS--YSPTSPSYSPTSPG 1873
Score = 152 bits (384), Expect = 2e-35
Identities = 82/121 (67%), Positives = 92/121 (76%), Gaps = 3/121 (2%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTSP 411
P SPG SP SP YSPTSPSY PTSP Y+P S YSP S +YSP++ SP SP YSPTSP
Sbjct: 1560 PQSPG-SP-SPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1617
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYT 234
+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+
Sbjct: 1618 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYS 1676
Query: 233 P 231
P
Sbjct: 1677 P 1677
Score = 143 bits (361), Expect = 9e-33
Identities = 80/140 (57%), Positives = 93/140 (66%), Gaps = 21/140 (15%)
Frame = -3
Query: 587 SPTSPGYSPT-------SPSYSPT-----------SPSYGPTSPSYNPQSAKYSP-SIAY 465
+P PG+SP SP+YSP SP Y PTSPSY+P S YSP S +Y
Sbjct: 1532 TPGGPGFSPANSESTGFSPAYSPAWSPQPQSPGSPSPGYSPTSPSYSPTSPGYSPASPSY 1591
Query: 464 SPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-S 291
SP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1592 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1651
Query: 290 AGYSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1652 PSYSPTSPSYSPTSP-SYSP 1670
Score = 75.1 bits (183), Expect = 4e-12
Identities = 53/133 (39%), Positives = 62/133 (46%), Gaps = 35/133 (26%)
Frame = -3
Query: 524 GPTSPSYNPQSAKYSPSIAYSPSNARLSP--ASPYSPTSPN------------------- 408
G S S +PQ ++ A A SP S +P P
Sbjct: 1498 GSPSQSMSPQMTPWNQG-ATPMHGASWSPMMGSGMTPGGPGFSPANSESTGFSPAYSPAW 1556
Query: 407 -------------YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 270
YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP S YSPT
Sbjct: 1557 SPQPQSPGSPSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1616
Query: 269 PGYSPSSTGQYTP 231
P YSP+S Y+P
Sbjct: 1617 PSYSPTSP-SYSP 1628
[32][TOP]
>UniRef100_Q5ACI7 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q5ACI7_CANAL
Length = 1728
Score = 174 bits (440), Expect = 6e-42
Identities = 92/131 (70%), Positives = 99/131 (75%), Gaps = 3/131 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSPSY PTSPSY+P S YSP S AYSP++ SP SP YSPT
Sbjct: 1599 YSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1658
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP S YSPT P YSP S G
Sbjct: 1659 SPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPGSPG- 1717
Query: 239 YTPHEGDKKDK 207
Y P E KKD+
Sbjct: 1718 YEP-EPPKKDE 1727
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP Y+PTSP+YSPTSPSY PTSP+Y+P S Y+P S AYSP++ SP SP YSPT
Sbjct: 1550 YSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPT 1609
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1610 SPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSP-S 1668
Query: 239 YTP 231
Y+P
Sbjct: 1669 YSP 1671
Score = 168 bits (426), Expect = 3e-40
Identities = 84/123 (68%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+PTSP YSPTSPSY+PTSP+Y PTSP+Y+P S YSP S YSP++ SP SP YSPT
Sbjct: 1571 YAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPT 1630
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1631 SPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSP-Q 1689
Query: 239 YTP 231
Y+P
Sbjct: 1690 YSP 1692
Score = 168 bits (425), Expect = 3e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSY+PTSP+Y PTSPSY P S YSP S +Y+P++ SP SP YSPT
Sbjct: 1543 YSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPT 1602
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSP YSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1603 SPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP-Q 1661
Query: 239 YTP 231
Y+P
Sbjct: 1662 YSP 1664
Score = 159 bits (401), Expect = 2e-37
Identities = 83/122 (68%), Positives = 94/122 (77%), Gaps = 5/122 (4%)
Frame = -3
Query: 581 TSPGY--SPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 414
TSPGY SPTSPSYSPTSPSY PTSP+Y+P S Y+P S AYSP++ +P SP YSPTS
Sbjct: 1537 TSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTS 1596
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQY 237
P YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y
Sbjct: 1597 PAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSP-SY 1655
Query: 236 TP 231
+P
Sbjct: 1656 SP 1657
Score = 149 bits (375), Expect = 2e-34
Identities = 78/122 (63%), Positives = 89/122 (72%), Gaps = 3/122 (2%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 414
S TSPGY+ YSPTSPSY PTSPSY P S YSP S +Y+P++ SP SP Y+PTS
Sbjct: 1530 SITSPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTS 1589
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQY 237
P YSPTSP+YSPTSPSYSP+SP YSP+SP S SP YSP S YSPT P YSP+S Y
Sbjct: 1590 PAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP-SY 1648
Query: 236 TP 231
+P
Sbjct: 1649 SP 1650
Score = 102 bits (254), Expect = 2e-20
Identities = 61/120 (50%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Frame = -3
Query: 581 TSPGYSPTSPSY-SPTSPSYGP-TSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
TS G PTSP+ SP S Y TSP Y SP YSPTSP+
Sbjct: 1509 TSYGGQPTSPAATSPFSYGYNSITSPGYT-------------------SPGYGYSPTSPS 1549
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSY+PTSP+YSP+SP+Y+P+SP S SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1550 YSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSP-SYSP 1608
[33][TOP]
>UniRef100_C5E245 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5E245_LACTC
Length = 1740
Score = 174 bits (440), Expect = 6e-42
Identities = 92/157 (58%), Positives = 106/157 (67%), Gaps = 16/157 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1579 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1638
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS--- 249
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1639 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1698
Query: 248 ----------TGQYTPHEGDKKDKTGKKDASKDDKGN 168
+ Y+P + KK+ D+ N
Sbjct: 1699 SPTSPSYSPTSPSYSPGSPSYSPGSPKKENDNDNNNN 1735
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1551 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1610
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1611 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1669
Query: 239 YTP 231
Y+P
Sbjct: 1670 YSP 1672
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1558 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1617
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1618 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1676
Query: 239 YTP 231
Y+P
Sbjct: 1677 YSP 1679
Score = 172 bits (435), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
+SPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1544 FSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1603
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1604 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1662
Query: 239 YTP 231
Y+P
Sbjct: 1663 YSP 1665
Score = 164 bits (415), Expect = 5e-39
Identities = 83/119 (69%), Positives = 95/119 (79%), Gaps = 3/119 (2%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTSPNY 405
SPG+SPTSP+YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPTSP+Y
Sbjct: 1541 SPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1600
Query: 404 SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1601 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1658
Score = 162 bits (410), Expect = 2e-38
Identities = 90/148 (60%), Positives = 103/148 (69%), Gaps = 7/148 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1600 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1659
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
SP+YSPTSPSYSPTSPSYSP+SP+YSP SP SP YSP S YSPT P YSP
Sbjct: 1660 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP----TSPSYSPTSPSYSPTSPSYSPG 1715
Query: 251 STGQYTPHEGDKKDKTGKKDASKDDKGN 168
S Y+P G K + + + ++ N
Sbjct: 1716 SP-SYSP--GSPKKENDNDNNNNNNNNN 1740
Score = 141 bits (355), Expect = 4e-32
Identities = 75/121 (61%), Positives = 87/121 (71%), Gaps = 2/121 (1%)
Frame = -3
Query: 587 SPTSPGYSPT-SPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
+PTSPG+ SP +SPTSP+Y PTSPSY+P S YSP+ SPS YSPTSP
Sbjct: 1530 APTSPGFGGVASPGFSPTSPAYSPTSPSYSPTSPSYSPT---SPS---------YSPTSP 1577
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYT 234
+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+
Sbjct: 1578 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYS 1636
Query: 233 P 231
P
Sbjct: 1637 P 1637
Score = 104 bits (260), Expect = 5e-21
Identities = 59/116 (50%), Positives = 69/116 (59%), Gaps = 2/116 (1%)
Frame = -3
Query: 572 GYSPTSPSYSPT-SPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPT 396
G +PTSP + SP + PTSP+Y SPTSP+YSPT
Sbjct: 1528 GDAPTSPGFGGVASPGFSPTSPAY--------------------------SPTSPSYSPT 1561
Query: 395 SPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1562 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1616
Score = 80.1 bits (196), Expect = 1e-13
Identities = 60/124 (48%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
Frame = -3
Query: 569 YSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSP-----ASP-YSPTSPN 408
+SP S S + S G T+ SP Y +A SP ASP +SPTSP
Sbjct: 1493 FSPLVDSGSTDAMSGGFTAYGGADYGGASSPFSGYG--DAPTSPGFGGVASPGFSPTSPA 1550
Query: 407 YSPTSPSYSPTSPSYSPSSP----TYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
YSPTSPSYSPTSPSYS +YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1551 YSPTSPSYSPTSPSYS----PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP- 1605
Query: 242 QYTP 231
Y+P
Sbjct: 1606 SYSP 1609
[34][TOP]
>UniRef100_C4YN85 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=C4YN85_CANAL
Length = 1742
Score = 174 bits (440), Expect = 6e-42
Identities = 92/131 (70%), Positives = 99/131 (75%), Gaps = 3/131 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSPSY PTSPSY+P S YSP S AYSP++ SP SP YSPT
Sbjct: 1613 YSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPT 1672
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP S YSPT P YSP S G
Sbjct: 1673 SPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPGSPG- 1731
Query: 239 YTPHEGDKKDK 207
Y P E KKD+
Sbjct: 1732 YEP-EPPKKDE 1741
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP Y+PTSP+YSPTSPSY PTSP+Y+P S Y+P S AYSP++ SP SP YSPT
Sbjct: 1564 YSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPT 1623
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1624 SPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSP-S 1682
Query: 239 YTP 231
Y+P
Sbjct: 1683 YSP 1685
Score = 168 bits (426), Expect = 3e-40
Identities = 84/123 (68%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+PTSP YSPTSPSY+PTSP+Y PTSP+Y+P S YSP S YSP++ SP SP YSPT
Sbjct: 1585 YAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPT 1644
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1645 SPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSP-Q 1703
Query: 239 YTP 231
Y+P
Sbjct: 1704 YSP 1706
Score = 164 bits (415), Expect = 5e-39
Identities = 83/123 (67%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSY+PTSP+Y PTSPSY P S YSP S +Y+P++ SP SP Y+PT
Sbjct: 1543 YSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPT 1602
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSP+YSPTSPSYSP+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1603 SPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP-S 1661
Query: 239 YTP 231
Y+P
Sbjct: 1662 YSP 1664
Score = 158 bits (400), Expect = 3e-37
Identities = 81/122 (66%), Positives = 96/122 (78%), Gaps = 5/122 (4%)
Frame = -3
Query: 581 TSPGY--SPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 414
TSPGY SPTSPSYSPTSPSY PTSP+Y+P S Y+P S AYSP++ +P SP YSPTS
Sbjct: 1537 TSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTS 1596
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQY 237
P+Y+PTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y
Sbjct: 1597 PSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPA-Y 1655
Query: 236 TP 231
+P
Sbjct: 1656 SP 1657
Score = 101 bits (251), Expect = 5e-20
Identities = 60/120 (50%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Frame = -3
Query: 581 TSPGYSPTSPSY-SPTSPSYGP-TSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
TS G PTSP+ SP S Y TSP Y SP YSPTSP+
Sbjct: 1509 TSYGGQPTSPAATSPFSYGYNSITSPGYT-------------------SPGYGYSPTSPS 1549
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSY+PTSP+YSP+SP+Y+P+SP S SP Y+P S YSPT P Y+P+S Y+P
Sbjct: 1550 YSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPA-YSP 1608
[35][TOP]
>UniRef100_UPI0001796DD3 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase II subunit A) (DNA-directed RNA polymerase III
largest subunit) n=1 Tax=Equus caballus
RepID=UPI0001796DD3
Length = 1834
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1747
Query: 239 YTP 231
Y+P
Sbjct: 1748 YSP 1750
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1709
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP S Y+PT P YSP+S
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP-S 1768
Query: 239 YTP 231
Y+P
Sbjct: 1769 YSP 1771
Score = 172 bits (437), Expect = 1e-41
Identities = 86/123 (69%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+YSP S YSPT P YSP+S
Sbjct: 1745 SPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPTSP-S 1803
Query: 239 YTP 231
Y+P
Sbjct: 1804 YSP 1806
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1675 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1733
Query: 239 YTP 231
Y+P
Sbjct: 1734 YSP 1736
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1668 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1726
Query: 239 YTP 231
Y+P
Sbjct: 1727 YSP 1729
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1593 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1652
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1653 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1713 YSPTSP-SYSP 1722
Score = 159 bits (403), Expect = 1e-37
Identities = 80/120 (66%), Positives = 92/120 (76%), Gaps = 3/120 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S Y+P++ SP SP YSPT
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPT 1772
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SPNY+PTSP+YSPTSPSYSP++P+YSP+SP S SP YSP S YS T P SP + +
Sbjct: 1773 SPNYTPTSPNYSPTSPSYSPTTPSYSPTSPSYSPTSPGYSPTSPTYSLTSPAISPDDSDE 1832
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1571 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1630
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1691 SYSPTSP-SYSP 1701
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1558 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1618 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1678 YSPTSPSYSPTSP-SYSP 1694
Score = 97.4 bits (241), Expect = 7e-19
Identities = 66/154 (42%), Positives = 84/154 (54%), Gaps = 38/154 (24%)
Frame = -3
Query: 578 SPGYSP----TSPSYSPTSPSYG----PTSPSYNPQSAK--------YSPSIAYSP-SNA 450
SP +P +P+Y SPS G P + ++P +A YSP+ + +P S
Sbjct: 1514 SPAMTPWNVGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPG 1573
Query: 449 RLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSS 330
P+SPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+S
Sbjct: 1574 SPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTS 1633
Query: 329 PYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1634 PNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
[36][TOP]
>UniRef100_UPI0000F2BF13 PREDICTED: similar to RNA polymerase II isoform 2 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF13
Length = 1932
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1591 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1651 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1709
Query: 239 YTP 231
Y+P
Sbjct: 1710 YSP 1712
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1671
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP S Y+PT P YSP+S
Sbjct: 1672 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP-S 1730
Query: 239 YTP 231
Y+P
Sbjct: 1731 YSP 1733
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1577 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1636
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1637 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1695
Query: 239 YTP 231
Y+P
Sbjct: 1696 YSP 1698
Score = 171 bits (433), Expect = 4e-41
Identities = 85/123 (69%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y+P S Y+P S +YSP++ SP SP Y+PT
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1741
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PS+ YSP+ P YSP+S +
Sbjct: 1742 SPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSP-K 1800
Query: 239 YTP 231
YTP
Sbjct: 1801 YTP 1803
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1570 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1630 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1688
Query: 239 YTP 231
Y+P
Sbjct: 1689 YSP 1691
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1555 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1614
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1615 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1674
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1675 YSPTSP-SYSP 1684
Score = 162 bits (411), Expect = 1e-38
Identities = 83/130 (63%), Positives = 98/130 (75%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSP+Y+PTSP+Y PTSPSY+P S YSP S +YSPS+ R +P SP
Sbjct: 1724 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1783
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP S YSPT P Y
Sbjct: 1784 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTY 1843
Query: 260 SPSSTGQYTP 231
SP +T +Y+P
Sbjct: 1844 SP-TTPKYSP 1852
Score = 161 bits (407), Expect = 4e-38
Identities = 80/120 (66%), Positives = 92/120 (76%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPT
Sbjct: 1794 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1853
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1854 SPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1913
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1801 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1860
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1861 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1917
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1918 LTSPA-ISPDDSDEEN 1932
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1533 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1592
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1593 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1652
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1653 SYSPTSP-SYSP 1663
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1520 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1579
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1580 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1639
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1640 YSPTSPSYSPTSP-SYSP 1656
Score = 94.7 bits (234), Expect = 5e-18
Identities = 64/141 (45%), Positives = 81/141 (57%), Gaps = 22/141 (15%)
Frame = -3
Query: 587 SPTSPGYSPTSPS-YSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT-- 417
+P + G+SP++ S S SP Y SP+++P +P SP P+SPY P+
Sbjct: 1502 TPGAAGFSPSAASDASGFSPGY---SPAWSP-----TPGSPGSPG-----PSSPYIPSPG 1548
Query: 416 ---SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 294
SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1549 GAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPT 1608
Query: 293 SAGYSPTLPGYSPSSTGQYTP 231
S YSPT P YSP+S Y+P
Sbjct: 1609 SPSYSPTSPSYSPTSP-SYSP 1628
[37][TOP]
>UniRef100_UPI0000F2BF12 PREDICTED: similar to RNA polymerase II isoform 1 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF12
Length = 1970
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1747
Query: 239 YTP 231
Y+P
Sbjct: 1748 YSP 1750
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1709
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP S Y+PT P YSP+S
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP-S 1768
Query: 239 YTP 231
Y+P
Sbjct: 1769 YSP 1771
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1675 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1733
Query: 239 YTP 231
Y+P
Sbjct: 1734 YSP 1736
Score = 171 bits (433), Expect = 4e-41
Identities = 85/123 (69%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y+P S Y+P S +YSP++ SP SP Y+PT
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PS+ YSP+ P YSP+S +
Sbjct: 1780 SPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSP-K 1838
Query: 239 YTP 231
YTP
Sbjct: 1839 YTP 1841
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1668 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1726
Query: 239 YTP 231
Y+P
Sbjct: 1727 YSP 1729
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1593 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1652
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1653 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1713 YSPTSP-SYSP 1722
Score = 162 bits (411), Expect = 1e-38
Identities = 83/130 (63%), Positives = 98/130 (75%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSP+Y+PTSP+Y PTSPSY+P S YSP S +YSPS+ R +P SP
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1821
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP S YSPT P Y
Sbjct: 1822 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTY 1881
Query: 260 SPSSTGQYTP 231
SP +T +Y+P
Sbjct: 1882 SP-TTPKYSP 1890
Score = 161 bits (407), Expect = 4e-38
Identities = 80/120 (66%), Positives = 92/120 (76%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPT
Sbjct: 1832 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1891
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1892 SPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1951
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1839 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1898
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1899 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1955
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1956 LTSPA-ISPDDSDEEN 1970
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1571 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1630
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1691 SYSPTSP-SYSP 1701
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1558 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1618 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1678 YSPTSPSYSPTSP-SYSP 1694
Score = 97.4 bits (241), Expect = 7e-19
Identities = 66/154 (42%), Positives = 84/154 (54%), Gaps = 38/154 (24%)
Frame = -3
Query: 578 SPGYSP----TSPSYSPTSPSYG----PTSPSYNPQSAK--------YSPSIAYSP-SNA 450
SP +P +P+Y SPS G P + ++P +A YSP+ + +P S
Sbjct: 1514 SPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPG 1573
Query: 449 RLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSS 330
P+SPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+S
Sbjct: 1574 SPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTS 1633
Query: 329 PYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1634 PNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
[38][TOP]
>UniRef100_UPI0000EBDCD2 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
isoform 4 n=1 Tax=Bos taurus RepID=UPI0000EBDCD2
Length = 1970
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1747
Query: 239 YTP 231
Y+P
Sbjct: 1748 YSP 1750
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1709
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP S Y+PT P YSP+S
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP-S 1768
Query: 239 YTP 231
Y+P
Sbjct: 1769 YSP 1771
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1675 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1733
Query: 239 YTP 231
Y+P
Sbjct: 1734 YSP 1736
Score = 171 bits (433), Expect = 4e-41
Identities = 85/123 (69%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y+P S Y+P S +YSP++ SP SP Y+PT
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PS+ YSP+ P YSP+S +
Sbjct: 1780 SPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSP-K 1838
Query: 239 YTP 231
YTP
Sbjct: 1839 YTP 1841
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1668 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1726
Query: 239 YTP 231
Y+P
Sbjct: 1727 YSP 1729
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1593 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1652
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1653 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1713 YSPTSP-SYSP 1722
Score = 162 bits (411), Expect = 1e-38
Identities = 83/130 (63%), Positives = 98/130 (75%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSP+Y+PTSP+Y PTSPSY+P S YSP S +YSPS+ R +P SP
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1821
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP S YSPT P Y
Sbjct: 1822 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTY 1881
Query: 260 SPSSTGQYTP 231
SP +T +Y+P
Sbjct: 1882 SP-TTPKYSP 1890
Score = 161 bits (407), Expect = 4e-38
Identities = 80/120 (66%), Positives = 92/120 (76%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPT
Sbjct: 1832 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1891
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1892 SPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1951
Score = 151 bits (382), Expect = 3e-35
Identities = 78/136 (57%), Positives = 93/136 (68%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1839 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1898
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1899 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1955
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D ++
Sbjct: 1956 LTSPA-ISPDDSDDEN 1970
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1571 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1630
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1691 SYSPTSP-SYSP 1701
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1558 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1618 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1678 YSPTSPSYSPTSP-SYSP 1694
Score = 97.4 bits (241), Expect = 7e-19
Identities = 66/154 (42%), Positives = 84/154 (54%), Gaps = 38/154 (24%)
Frame = -3
Query: 578 SPGYSP----TSPSYSPTSPSYG----PTSPSYNPQSAK--------YSPSIAYSP-SNA 450
SP +P +P+Y SPS G P + ++P +A YSP+ + +P S
Sbjct: 1514 SPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPG 1573
Query: 449 RLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSS 330
P+SPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+S
Sbjct: 1574 SPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTS 1633
Query: 329 PYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1634 PNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
[39][TOP]
>UniRef100_UPI0000E48672 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48672
Length = 1913
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1652 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1711
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPS+ YSPT P YSP+S
Sbjct: 1712 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSP-S 1770
Query: 239 YTP 231
Y+P
Sbjct: 1771 YSP 1773
Score = 172 bits (437), Expect = 1e-41
Identities = 89/123 (72%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1673 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1732
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSP S YSP P YSPSS +
Sbjct: 1733 SPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSP-K 1791
Query: 239 YTP 231
Y+P
Sbjct: 1792 YSP 1794
Score = 169 bits (429), Expect = 1e-40
Identities = 86/123 (69%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSP+SP Y PTSPSY+P S YSP S +YSP + SP+SP YSPT
Sbjct: 1736 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPT 1795
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSP++SPSSPTYSP+SP S SP YSPS+ YSPT P YSP+S +
Sbjct: 1796 SPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSP-K 1854
Query: 239 YTP 231
Y+P
Sbjct: 1855 YSP 1857
Score = 160 bits (406), Expect = 5e-38
Identities = 81/126 (64%), Positives = 95/126 (75%), Gaps = 6/126 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP-YSPT 417
YSP SP YSP+SP YSPTSPSY PTSPSY+P S +SPS YSP++ SP SP YSP+
Sbjct: 1778 YSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPS 1837
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP+YSPTSP YSP+SPTYSP+SP S +SP YSP+ + YSPT P YSP+S
Sbjct: 1838 SPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPTSPSYSPTS 1897
Query: 248 TGQYTP 231
Y+P
Sbjct: 1898 P-SYSP 1902
Score = 160 bits (406), Expect = 5e-38
Identities = 82/118 (69%), Positives = 92/118 (77%), Gaps = 2/118 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP++ P+SP+Y+P S YSP S YSPS+ + SP SP YSPT
Sbjct: 1792 YSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPT 1851
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTG 243
SP YSP SP+YSPTSP YSPSSPTYSP+SP S SP SPS YSPT P YSP+S G
Sbjct: 1852 SPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPT-SPS--YSPTSPSYSPTSPG 1906
Score = 158 bits (400), Expect = 3e-37
Identities = 81/120 (67%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
+P SPGYSPTSPSYSPTSP Y P SPSY+P S YSP+ SPS + SP+ YSPTSP+
Sbjct: 1597 TPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPT---SPSYSPTSPS--YSPTSPS 1651
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1652 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1710
Score = 144 bits (362), Expect = 7e-33
Identities = 80/123 (65%), Positives = 91/123 (73%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y P+ G P SPSYSP SPSY P SP+ PQS YSP S +YSP++ SPASP YSPT
Sbjct: 1571 YIPSPAG--PMSPSYSPASPSYLPASPA-TPQSPGYSPTSPSYSPTSPGYSPASPSYSPT 1627
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1628 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1686
Query: 239 YTP 231
Y+P
Sbjct: 1687 YSP 1689
Score = 120 bits (301), Expect = 8e-26
Identities = 67/132 (50%), Positives = 83/132 (62%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPT------SPSYNPQSAKYSPSIA------YSPSNARL 444
+P PG+SP + + SP+Y P SP +P ++ Y PS A YSP++
Sbjct: 1532 TPGGPGFSPANSESTGFSPAYSPAWSPQPQSPG-SPANSPYIPSPAGPMSPSYSPASPSY 1590
Query: 443 SPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
PASP +P SP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1591 LPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1650
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1651 SYSPTSP-SYSP 1661
Score = 63.2 bits (152), Expect = 2e-08
Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 26/124 (20%)
Frame = -3
Query: 524 GPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPT--------- 375
G S S +PQ ++ A + ++P P +SP + + SP+YSP
Sbjct: 1506 GSPSQSMSPQMTPWNQG-ATPMHGSGMTPGGPGFSPANSESTGFSPAYSPAWSPQPQSPG 1564
Query: 374 ---------------SPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
SPSYSP+SP+Y P+SP ++ SP YSP S YSPT PGYSP+S
Sbjct: 1565 SPANSPYIPSPAGPMSPSYSPASPSYLPASP-ATPQSPGYSPTSPSYSPTSPGYSPASP- 1622
Query: 242 QYTP 231
Y+P
Sbjct: 1623 SYSP 1626
[40][TOP]
>UniRef100_UPI0000E48671 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48671
Length = 1921
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1660 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1719
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPS+ YSPT P YSP+S
Sbjct: 1720 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSP-S 1778
Query: 239 YTP 231
Y+P
Sbjct: 1779 YSP 1781
Score = 172 bits (437), Expect = 1e-41
Identities = 89/123 (72%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1681 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1740
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSP S YSP P YSPSS +
Sbjct: 1741 SPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSP-K 1799
Query: 239 YTP 231
Y+P
Sbjct: 1800 YSP 1802
Score = 169 bits (429), Expect = 1e-40
Identities = 86/123 (69%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSP+SP Y PTSPSY+P S YSP S +YSP + SP+SP YSPT
Sbjct: 1744 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPT 1803
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSP++SPSSPTYSP+SP S SP YSPS+ YSPT P YSP+S +
Sbjct: 1804 SPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSP-K 1862
Query: 239 YTP 231
Y+P
Sbjct: 1863 YSP 1865
Score = 160 bits (406), Expect = 5e-38
Identities = 81/126 (64%), Positives = 95/126 (75%), Gaps = 6/126 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP-YSPT 417
YSP SP YSP+SP YSPTSPSY PTSPSY+P S +SPS YSP++ SP SP YSP+
Sbjct: 1786 YSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPS 1845
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP+YSPTSP YSP+SPTYSP+SP S +SP YSP+ + YSPT P YSP+S
Sbjct: 1846 SPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPTSPSYSPTS 1905
Query: 248 TGQYTP 231
Y+P
Sbjct: 1906 P-SYSP 1910
Score = 160 bits (406), Expect = 5e-38
Identities = 82/118 (69%), Positives = 92/118 (77%), Gaps = 2/118 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP++ P+SP+Y+P S YSP S YSPS+ + SP SP YSPT
Sbjct: 1800 YSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPT 1859
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTG 243
SP YSP SP+YSPTSP YSPSSPTYSP+SP S SP SPS YSPT P YSP+S G
Sbjct: 1860 SPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPT-SPS--YSPTSPSYSPTSPG 1914
Score = 158 bits (400), Expect = 3e-37
Identities = 81/120 (67%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
+P SPGYSPTSPSYSPTSP Y P SPSY+P S YSP+ SPS + SP+ YSPTSP+
Sbjct: 1605 TPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPT---SPSYSPTSPS--YSPTSPS 1659
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1660 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1718
Score = 144 bits (362), Expect = 7e-33
Identities = 80/123 (65%), Positives = 91/123 (73%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y P+ G P SPSYSP SPSY P SP+ PQS YSP S +YSP++ SPASP YSPT
Sbjct: 1579 YIPSPAG--PMSPSYSPASPSYLPASPA-TPQSPGYSPTSPSYSPTSPGYSPASPSYSPT 1635
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1636 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1694
Query: 239 YTP 231
Y+P
Sbjct: 1695 YSP 1697
Score = 120 bits (301), Expect = 8e-26
Identities = 67/132 (50%), Positives = 83/132 (62%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPT------SPSYNPQSAKYSPSIA------YSPSNARL 444
+P PG+SP + + SP+Y P SP +P ++ Y PS A YSP++
Sbjct: 1540 TPGGPGFSPANSESTGFSPAYSPAWSPQPQSPG-SPANSPYIPSPAGPMSPSYSPASPSY 1598
Query: 443 SPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
PASP +P SP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1599 LPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1658
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1659 SYSPTSP-SYSP 1669
Score = 61.6 bits (148), Expect = 4e-08
Identities = 49/132 (37%), Positives = 62/132 (46%), Gaps = 34/132 (25%)
Frame = -3
Query: 524 GPTSPSYNPQSAKYSPSIAYSPSNARLSP--ASPYSPTSPNYSPT-------SPSYSPT- 375
G S S +PQ ++ A A SP S +P P +SP SP+YSP
Sbjct: 1506 GSPSQSMSPQMTPWNQG-ATPMHGASWSPMMGSGMTPGGPGFSPANSESTGFSPAYSPAW 1564
Query: 374 -----------------------SPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
SPSYSP+SP+Y P+SP ++ SP YSP S YSPT P
Sbjct: 1565 SPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASP-ATPQSPGYSPTSPSYSPTSP 1623
Query: 266 GYSPSSTGQYTP 231
GYSP+S Y+P
Sbjct: 1624 GYSPASP-SYSP 1634
[41][TOP]
>UniRef100_UPI00005A0B2B PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 22 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2B
Length = 1892
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1614 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1674 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1732
Query: 239 YTP 231
Y+P
Sbjct: 1733 YSP 1735
Score = 173 bits (438), Expect = 1e-41
Identities = 89/130 (68%), Positives = 100/130 (76%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP--------SAGYSPTLPGY 261
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP S YSPT P Y
Sbjct: 1695 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1754
Query: 260 SPSSTGQYTP 231
SP+S +YTP
Sbjct: 1755 SPTSP-KYTP 1763
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1600 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1659
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1660 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1718
Query: 239 YTP 231
Y+P
Sbjct: 1719 YSP 1721
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1593 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1653 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1711
Query: 239 YTP 231
Y+P
Sbjct: 1712 YSP 1714
Score = 167 bits (422), Expect = 7e-40
Identities = 83/123 (67%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP YSPS+ Y+PT P YSP+S +
Sbjct: 1730 SPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSP-K 1788
Query: 239 YTP 231
Y+P
Sbjct: 1789 YSP 1791
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1578 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1637
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1638 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1697
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1698 YSPTSP-SYSP 1707
Score = 162 bits (409), Expect = 2e-38
Identities = 81/127 (63%), Positives = 92/127 (72%), Gaps = 13/127 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSP Y+PTSPSY P+SP Y P S KYSP S YSP++ + SP SP
Sbjct: 1747 YSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPT 1806
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTL 270
YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT
Sbjct: 1807 TPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTS 1866
Query: 269 PGYSPSS 249
PGYSP+S
Sbjct: 1867 PGYSPTS 1873
Score = 155 bits (393), Expect = 2e-36
Identities = 83/127 (65%), Positives = 97/127 (76%), Gaps = 7/127 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSP+
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1736
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
PNY+PTSPSYSPTSPSYSP+SP Y+P SP +SP+Y+P S YSPT P YSP+
Sbjct: 1737 RPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSP----SSPEYTPTSPKYSPTSPKYSPT 1792
Query: 251 STGQYTP 231
S +Y+P
Sbjct: 1793 SP-KYSP 1798
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1761 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1820
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1821 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1877
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1878 LTSPA-ISPDDSDEEN 1892
Score = 147 bits (372), Expect = 5e-34
Identities = 81/123 (65%), Positives = 91/123 (73%), Gaps = 4/123 (3%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
SP SPG SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ SP SP YSPT
Sbjct: 1566 SPGSPG-GAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1624
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1625 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1683
Query: 239 YTP 231
Y+P
Sbjct: 1684 YSP 1686
Score = 122 bits (305), Expect = 3e-26
Identities = 72/120 (60%), Positives = 82/120 (68%), Gaps = 4/120 (3%)
Frame = -3
Query: 578 SPGYSPT-SPSY-SPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPN 408
SPGYSP SP+ SP SP G SPSY+P S Y P S +P SP YSPTSP+
Sbjct: 1553 SPGYSPAWSPTPGSPGSPG-GAMSPSYSPTSPAYEPR-----SPGGYTPQSPSYSPTSPS 1606
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1607 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1665
Score = 98.6 bits (244), Expect = 3e-19
Identities = 68/146 (46%), Positives = 79/146 (54%), Gaps = 32/146 (21%)
Frame = -3
Query: 572 GYSPT-SPSYSPTSPSYGPTSPSYN----PQSAKYSPSIA---------YSP--SNARLS 441
G SP +P +P+YG SPS P +A +SPS A YSP S S
Sbjct: 1507 GISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGS 1566
Query: 440 PASPYSPTSPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYSSGASP 306
P SP SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S SP
Sbjct: 1567 PGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1626
Query: 305 DYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSP S YSPT P YSP+S Y+P
Sbjct: 1627 SYSPTSPSYSPTSPSYSPTSP-SYSP 1651
[42][TOP]
>UniRef100_UPI00005A0B2A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 21 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2A
Length = 1896
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1618 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1677
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1678 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1736
Query: 239 YTP 231
Y+P
Sbjct: 1737 YSP 1739
Score = 173 bits (438), Expect = 1e-41
Identities = 89/130 (68%), Positives = 100/130 (76%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1639 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1698
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP--------SAGYSPTLPGY 261
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP S YSPT P Y
Sbjct: 1699 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1758
Query: 260 SPSSTGQYTP 231
SP+S +YTP
Sbjct: 1759 SPTSP-KYTP 1767
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1604 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1663
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1664 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1722
Query: 239 YTP 231
Y+P
Sbjct: 1723 YSP 1725
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1597 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1656
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1657 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1715
Query: 239 YTP 231
Y+P
Sbjct: 1716 YSP 1718
Score = 167 bits (422), Expect = 7e-40
Identities = 83/123 (67%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1674 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1733
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP YSPS+ Y+PT P YSP+S +
Sbjct: 1734 SPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSP-K 1792
Query: 239 YTP 231
Y+P
Sbjct: 1793 YSP 1795
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1582 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1641
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1642 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1701
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1702 YSPTSP-SYSP 1711
Score = 162 bits (409), Expect = 2e-38
Identities = 81/127 (63%), Positives = 92/127 (72%), Gaps = 13/127 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSP Y+PTSPSY P+SP Y P S KYSP S YSP++ + SP SP
Sbjct: 1751 YSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPT 1810
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTL 270
YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT
Sbjct: 1811 TPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTS 1870
Query: 269 PGYSPSS 249
PGYSP+S
Sbjct: 1871 PGYSPTS 1877
Score = 155 bits (393), Expect = 2e-36
Identities = 83/127 (65%), Positives = 97/127 (76%), Gaps = 7/127 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSP+
Sbjct: 1681 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1740
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
PNY+PTSPSYSPTSPSYSP+SP Y+P SP +SP+Y+P S YSPT P YSP+
Sbjct: 1741 RPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSP----SSPEYTPTSPKYSPTSPKYSPT 1796
Query: 251 STGQYTP 231
S +Y+P
Sbjct: 1797 SP-KYSP 1802
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1765 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1824
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1825 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1881
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1882 LTSPA-ISPDDSDEEN 1896
Score = 147 bits (372), Expect = 5e-34
Identities = 81/123 (65%), Positives = 91/123 (73%), Gaps = 4/123 (3%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
SP SPG SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ SP SP YSPT
Sbjct: 1570 SPGSPG-GAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1628
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1629 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1687
Query: 239 YTP 231
Y+P
Sbjct: 1688 YSP 1690
Score = 122 bits (305), Expect = 3e-26
Identities = 72/120 (60%), Positives = 82/120 (68%), Gaps = 4/120 (3%)
Frame = -3
Query: 578 SPGYSPT-SPSY-SPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPN 408
SPGYSP SP+ SP SP G SPSY+P S Y P S +P SP YSPTSP+
Sbjct: 1557 SPGYSPAWSPTPGSPGSPG-GAMSPSYSPTSPAYEPR-----SPGGYTPQSPSYSPTSPS 1610
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1611 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1669
Score = 100 bits (250), Expect = 7e-20
Identities = 63/149 (42%), Positives = 79/149 (53%), Gaps = 40/149 (26%)
Frame = -3
Query: 557 SPSYSPTSPSYGPTSPSYNPQS------AKYSPSIA------------------------ 468
SP+ +P + P +++P+S A +SPS A
Sbjct: 1515 SPAMTPWNQGATPAYGAWSPRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSP 1574
Query: 467 -------YSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 315
YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S
Sbjct: 1575 GGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1634
Query: 314 ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP YSP S YSPT P YSP+S Y+P
Sbjct: 1635 TSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1662
Score = 98.6 bits (244), Expect = 3e-19
Identities = 64/140 (45%), Positives = 80/140 (57%), Gaps = 21/140 (15%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTS---PSYGPTSPSYNPQSAKYSP--SIAYSPSNARLSPASPYS 423
+P + G +P ++SP S P SPS ++ +SP S A+SP+ SP SP
Sbjct: 1519 TPWNQGATPAYGAWSPRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPG--SPGSPGG 1576
Query: 422 PTSPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-S 291
SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1577 AMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTS 1636
Query: 290 AGYSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1637 PSYSPTSPSYSPTSP-SYSP 1655
[43][TOP]
>UniRef100_UPI00005A0B29 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 20 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B29
Length = 1891
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1597 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1656
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1657 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1715
Query: 239 YTP 231
Y+P
Sbjct: 1716 YSP 1718
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1618 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1677
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS Y+PT P YSP+S
Sbjct: 1678 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSP-S 1736
Query: 239 YTP 231
Y+P
Sbjct: 1737 YSP 1739
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1583 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1642
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1643 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1701
Query: 239 YTP 231
Y+P
Sbjct: 1702 YSP 1704
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1576 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1635
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1636 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1694
Query: 239 YTP 231
Y+P
Sbjct: 1695 YSP 1697
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1561 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1620
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1621 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1680
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1681 YSPTSP-SYSP 1690
Score = 157 bits (397), Expect = 6e-37
Identities = 78/119 (65%), Positives = 91/119 (76%), Gaps = 6/119 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 414
+PTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPTS
Sbjct: 1754 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1813
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
P YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1814 PTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1872
Score = 155 bits (391), Expect = 3e-36
Identities = 84/139 (60%), Positives = 95/139 (68%), Gaps = 19/139 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSPS Y+P++ SP SP YSPT
Sbjct: 1681 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1740
Query: 416 SPNYSP----------------TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 288
SPNY+P TSPSYSP+SP Y+P+SP YSP+SP S SP YSP S
Sbjct: 1741 SPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1800
Query: 287 GYSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1801 TYSPTTPKYSPTSP-TYSP 1818
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1760 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1819
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1820 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1876
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1877 LTSPA-ISPDDSDEEN 1891
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1539 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1598
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1599 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1658
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1659 SYSPTSP-SYSP 1669
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1526 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1585
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1586 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1645
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1646 YSPTSPSYSPTSP-SYSP 1662
Score = 59.7 bits (143), Expect = 2e-07
Identities = 52/128 (40%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Frame = -3
Query: 572 GYSPT-SPSYSPTSPSYGP---TSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT-SPN 408
G SP +P +P+Y P P +A +SPS A S AS +SP SP
Sbjct: 1481 GISPAMTPWNQGATPAYDPDPGAGSGMTPGAAGFSPSAA--------SDASGFSPGYSPA 1532
Query: 407 YSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGASP-DYSP-SAGYSPTLPGYSP 255
+SPT S PS Y PS SP+YSP+SP SP Y+P S YSPT P YSP
Sbjct: 1533 WSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSP 1592
Query: 254 SSTGQYTP 231
+S Y+P
Sbjct: 1593 TSP-SYSP 1599
[44][TOP]
>UniRef100_UPI00005A0B28 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 19 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B28
Length = 1908
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1614 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1674 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1732
Query: 239 YTP 231
Y+P
Sbjct: 1733 YSP 1735
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS Y+PT P YSP+S
Sbjct: 1695 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSP-S 1753
Query: 239 YTP 231
Y+P
Sbjct: 1754 YSP 1756
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1600 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1659
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1660 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1718
Query: 239 YTP 231
Y+P
Sbjct: 1719 YSP 1721
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1593 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1653 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1711
Query: 239 YTP 231
Y+P
Sbjct: 1712 YSP 1714
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1578 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1637
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1638 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1697
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1698 YSPTSP-SYSP 1707
Score = 157 bits (397), Expect = 6e-37
Identities = 78/119 (65%), Positives = 91/119 (76%), Gaps = 6/119 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 414
+PTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPTS
Sbjct: 1771 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1830
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
P YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1831 PTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1889
Score = 155 bits (391), Expect = 3e-36
Identities = 84/139 (60%), Positives = 95/139 (68%), Gaps = 19/139 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSPS Y+P++ SP SP YSPT
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1757
Query: 416 SPNYSP----------------TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 288
SPNY+P TSPSYSP+SP Y+P+SP YSP+SP S SP YSP S
Sbjct: 1758 SPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1817
Query: 287 GYSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1818 TYSPTTPKYSPTSP-TYSP 1835
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1777 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1836
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1837 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1893
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1894 LTSPA-ISPDDSDEEN 1908
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1556 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1615
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1616 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1675
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1676 SYSPTSP-SYSP 1686
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1543 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1602
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1603 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1662
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1663 YSPTSPSYSPTSP-SYSP 1679
Score = 59.7 bits (143), Expect = 2e-07
Identities = 52/128 (40%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Frame = -3
Query: 572 GYSPT-SPSYSPTSPSYGP---TSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT-SPN 408
G SP +P +P+Y P P +A +SPS A S AS +SP SP
Sbjct: 1498 GISPAMTPWNQGATPAYDPDPGAGSGMTPGAAGFSPSAA--------SDASGFSPGYSPA 1549
Query: 407 YSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGASP-DYSP-SAGYSPTLPGYSP 255
+SPT S PS Y PS SP+YSP+SP SP Y+P S YSPT P YSP
Sbjct: 1550 WSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSP 1609
Query: 254 SSTGQYTP 231
+S Y+P
Sbjct: 1610 TSP-SYSP 1616
[45][TOP]
>UniRef100_UPI00005A0B26 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 17 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B26
Length = 1684
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1524 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1583
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1584 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1642
Query: 239 YTP 231
Y+P
Sbjct: 1643 YSP 1645
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1545 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS Y+PT P YSP+S
Sbjct: 1605 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSP-S 1663
Query: 239 YTP 231
Y+P
Sbjct: 1664 YSP 1666
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1510 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1569
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1570 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1628
Query: 239 YTP 231
Y+P
Sbjct: 1629 YSP 1631
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1503 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1562
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1563 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1621
Query: 239 YTP 231
Y+P
Sbjct: 1622 YSP 1624
Score = 166 bits (419), Expect = 2e-39
Identities = 82/117 (70%), Positives = 92/117 (78%), Gaps = 3/117 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP S Y+P P YSP+S
Sbjct: 1626 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTS 1682
Score = 164 bits (414), Expect = 6e-39
Identities = 85/124 (68%), Positives = 96/124 (77%), Gaps = 4/124 (3%)
Frame = -3
Query: 590 YSPTSPG-YSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSP 420
Y P SPG Y+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSP
Sbjct: 1495 YEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1554
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1555 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP- 1613
Query: 242 QYTP 231
Y+P
Sbjct: 1614 SYSP 1617
Score = 158 bits (399), Expect = 3e-37
Identities = 86/130 (66%), Positives = 95/130 (73%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1552 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1611
Query: 416 SPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
SP+YSPTSPSYSPTSPSYS P+SP YSPS P + SP YSP S YSPT P Y
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNY 1671
Query: 260 SPSSTGQYTP 231
+P S Y+P
Sbjct: 1672 TPMSP-NYSP 1680
Score = 145 bits (365), Expect = 3e-33
Identities = 70/98 (71%), Positives = 79/98 (80%), Gaps = 2/98 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSP+
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1646
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
PNY+PTSPSYSPTSPSYSP+SP Y+P SP S SP+
Sbjct: 1647 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1684
Score = 130 bits (327), Expect = 8e-29
Identities = 72/119 (60%), Positives = 79/119 (66%), Gaps = 2/119 (1%)
Frame = -3
Query: 581 TSPGYSPTSPS-YSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNY 405
TSP Y P SP Y+P SPSY PTSPSY+P S PS YSPTSPNY
Sbjct: 1491 TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTS----------PS---------YSPTSPNY 1531
Query: 404 SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1532 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1589
Score = 81.6 bits (200), Expect = 4e-14
Identities = 51/105 (48%), Positives = 58/105 (55%), Gaps = 16/105 (15%)
Frame = -3
Query: 497 QSAKYSPSIAYSPSNARLSPASPYSPTSPNY---------------SPTSPSYSPTSPSY 363
+ KY I P+N A+ TSP Y SPTSPSYSPTSPSY
Sbjct: 1468 EKCKYGMEI---PTNIPGLGAAGRESTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSY 1524
Query: 362 SPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP+SP YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1525 SPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1568
[46][TOP]
>UniRef100_UPI00005A0B25 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 16 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B25
Length = 1752
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1524 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1583
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1584 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1642
Query: 239 YTP 231
Y+P
Sbjct: 1643 YSP 1645
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1545 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS Y+PT P YSP+S
Sbjct: 1605 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSP-S 1663
Query: 239 YTP 231
Y+P
Sbjct: 1664 YSP 1666
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1510 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1569
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1570 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1628
Query: 239 YTP 231
Y+P
Sbjct: 1629 YSP 1631
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1503 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1562
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1563 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1621
Query: 239 YTP 231
Y+P
Sbjct: 1622 YSP 1624
Score = 167 bits (422), Expect = 7e-40
Identities = 84/126 (66%), Positives = 98/126 (77%), Gaps = 6/126 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA---GYSPTLPGYSPSST 246
SP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP++ YSP+ P YSP+S
Sbjct: 1626 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSP 1685
Query: 245 G-QYTP 231
+Y+P
Sbjct: 1686 NPKYSP 1691
Score = 164 bits (414), Expect = 6e-39
Identities = 85/124 (68%), Positives = 96/124 (77%), Gaps = 4/124 (3%)
Frame = -3
Query: 590 YSPTSPG-YSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSP 420
Y P SPG Y+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSP
Sbjct: 1495 YEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1554
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1555 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP- 1613
Query: 242 QYTP 231
Y+P
Sbjct: 1614 SYSP 1617
Score = 160 bits (406), Expect = 5e-38
Identities = 86/129 (66%), Positives = 97/129 (75%), Gaps = 9/129 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSP+
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1646
Query: 416 SPNYSPTSPSYSPTSPSYSPSSP--TYSPSSPYSSGASPD-----YSPSAGYSPTLPGYS 258
PNY+PTSPSYSPTSPSYSP+SP TYSPSSP S SP+ SP+ YSPT P YS
Sbjct: 1647 RPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPNPTYSPTSPKYS 1706
Query: 257 PSSTGQYTP 231
P+S Y+P
Sbjct: 1707 PTSP-TYSP 1714
Score = 138 bits (348), Expect = 3e-31
Identities = 77/138 (55%), Positives = 92/138 (66%), Gaps = 11/138 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS---IAYSPSNARLSPASP--- 429
YSPTSP YSPTSP+YSP+ P+Y PTSPSY+P S YSP+ YSPS+ SP SP
Sbjct: 1629 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPK 1688
Query: 428 YSPTSPN--YSPTSPSYSPTSPSYSPSSP---TYSPSSPYSSGASPDYSPSAGYSPTLPG 264
YSPTSPN YSPTSP YSPTSP+YSP+SP TYSP+SP GYSPT P
Sbjct: 1689 YSPTSPNPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP-------------GYSPTSPT 1735
Query: 263 YSPSSTGQYTPHEGDKKD 210
YS +S +P + D+++
Sbjct: 1736 YSLTSPA-ISPDDSDEEN 1752
Score = 130 bits (327), Expect = 8e-29
Identities = 72/119 (60%), Positives = 79/119 (66%), Gaps = 2/119 (1%)
Frame = -3
Query: 581 TSPGYSPTSPS-YSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNY 405
TSP Y P SP Y+P SPSY PTSPSY+P S PS YSPTSPNY
Sbjct: 1491 TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTS----------PS---------YSPTSPNY 1531
Query: 404 SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1532 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1589
Score = 81.6 bits (200), Expect = 4e-14
Identities = 51/105 (48%), Positives = 58/105 (55%), Gaps = 16/105 (15%)
Frame = -3
Query: 497 QSAKYSPSIAYSPSNARLSPASPYSPTSPNY---------------SPTSPSYSPTSPSY 363
+ KY I P+N A+ TSP Y SPTSPSYSPTSPSY
Sbjct: 1468 EKCKYGMEI---PTNIPGLGAAGRESTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSY 1524
Query: 362 SPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP+SP YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1525 SPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1568
[47][TOP]
>UniRef100_UPI00005A0B24 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 15 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B24
Length = 1924
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1630 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1689
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1690 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1748
Query: 239 YTP 231
Y+P
Sbjct: 1749 YSP 1751
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1651 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1710
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS Y+PT P YSP+S
Sbjct: 1711 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSP-S 1769
Query: 239 YTP 231
Y+P
Sbjct: 1770 YSP 1772
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1616 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1675
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1676 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1734
Query: 239 YTP 231
Y+P
Sbjct: 1735 YSP 1737
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1609 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1668
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1669 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1727
Query: 239 YTP 231
Y+P
Sbjct: 1728 YSP 1730
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1594 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1653
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1654 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1713
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1714 YSPTSP-SYSP 1723
Score = 157 bits (397), Expect = 6e-37
Identities = 78/119 (65%), Positives = 91/119 (76%), Gaps = 6/119 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 414
+PTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPTS
Sbjct: 1787 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1846
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
P YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1847 PTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1905
Score = 155 bits (391), Expect = 3e-36
Identities = 84/139 (60%), Positives = 95/139 (68%), Gaps = 19/139 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSPS Y+P++ SP SP YSPT
Sbjct: 1714 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1773
Query: 416 SPNYSP----------------TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 288
SPNY+P TSPSYSP+SP Y+P+SP YSP+SP S SP YSP S
Sbjct: 1774 SPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1833
Query: 287 GYSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1834 TYSPTTPKYSPTSP-TYSP 1851
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1793 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1852
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1853 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1909
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1910 LTSPA-ISPDDSDEEN 1924
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1572 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1631
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1632 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1691
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1692 SYSPTSP-SYSP 1702
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1559 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1618
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1619 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1678
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1679 YSPTSPSYSPTSP-SYSP 1695
Score = 59.7 bits (143), Expect = 2e-07
Identities = 52/128 (40%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Frame = -3
Query: 572 GYSPT-SPSYSPTSPSYGP---TSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT-SPN 408
G SP +P +P+Y P P +A +SPS A S AS +SP SP
Sbjct: 1514 GISPAMTPWNQGATPAYDPDPGAGSGMTPGAAGFSPSAA--------SDASGFSPGYSPA 1565
Query: 407 YSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGASP-DYSP-SAGYSPTLPGYSP 255
+SPT S PS Y PS SP+YSP+SP SP Y+P S YSPT P YSP
Sbjct: 1566 WSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSP 1625
Query: 254 SSTGQYTP 231
+S Y+P
Sbjct: 1626 TSP-SYSP 1632
[48][TOP]
>UniRef100_UPI00005A0B23 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 14 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B23
Length = 1653
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1493 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1552
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1553 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1611
Query: 239 YTP 231
Y+P
Sbjct: 1612 YSP 1614
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1514 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1573
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS Y+PT P YSP+S
Sbjct: 1574 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSP-S 1632
Query: 239 YTP 231
Y+P
Sbjct: 1633 YSP 1635
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1479 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1538
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1539 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1597
Query: 239 YTP 231
Y+P
Sbjct: 1598 YSP 1600
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1472 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1531
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1532 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1590
Query: 239 YTP 231
Y+P
Sbjct: 1591 YSP 1593
Score = 166 bits (419), Expect = 2e-39
Identities = 82/117 (70%), Positives = 92/117 (78%), Gaps = 3/117 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1535 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP S Y+P P YSP+S
Sbjct: 1595 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTS 1651
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1457 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1516
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1517 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1576
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1577 YSPTSP-SYSP 1586
Score = 158 bits (399), Expect = 3e-37
Identities = 86/130 (66%), Positives = 95/130 (73%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1521 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1580
Query: 416 SPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
SP+YSPTSPSYSPTSPSYS P+SP YSPS P + SP YSP S YSPT P Y
Sbjct: 1581 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNY 1640
Query: 260 SPSSTGQYTP 231
+P S Y+P
Sbjct: 1641 TPMSP-NYSP 1649
Score = 145 bits (365), Expect = 3e-33
Identities = 70/98 (71%), Positives = 79/98 (80%), Gaps = 2/98 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSP+
Sbjct: 1556 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1615
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
PNY+PTSPSYSPTSPSYSP+SP Y+P SP S SP+
Sbjct: 1616 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1653
Score = 139 bits (349), Expect = 2e-31
Identities = 75/118 (63%), Positives = 83/118 (70%), Gaps = 2/118 (1%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYS 402
SP YSPTSP+Y P SP Y P SPSY+P S YSP+ SPS YSPTSPNYS
Sbjct: 1454 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPT---SPS---------YSPTSPNYS 1501
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
PTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1502 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1558
[49][TOP]
>UniRef100_UPI00005A0B22 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 13 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B22
Length = 1722
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1493 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1552
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1553 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1611
Query: 239 YTP 231
Y+P
Sbjct: 1612 YSP 1614
Score = 173 bits (438), Expect = 1e-41
Identities = 89/129 (68%), Positives = 102/129 (79%), Gaps = 9/129 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1514 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1573
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSS--- 249
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS+ YSPT P YSP+S
Sbjct: 1574 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSPTY 1633
Query: 248 ---TGQYTP 231
T +Y+P
Sbjct: 1634 SPTTPKYSP 1642
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1479 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1538
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1539 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1597
Query: 239 YTP 231
Y+P
Sbjct: 1598 YSP 1600
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1472 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1531
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1532 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1590
Query: 239 YTP 231
Y+P
Sbjct: 1591 YSP 1593
Score = 167 bits (424), Expect = 4e-40
Identities = 83/120 (69%), Positives = 94/120 (78%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y+P S KYSP S YSP++ SP +P YSPT
Sbjct: 1584 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1643
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1644 SPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1703
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1457 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1516
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1517 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1576
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1577 YSPTSP-SYSP 1586
Score = 162 bits (410), Expect = 2e-38
Identities = 85/126 (67%), Positives = 96/126 (76%), Gaps = 6/126 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSPS YSP++ + SP SP YSPT
Sbjct: 1577 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSPTYSPT 1636
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG---YSPSS 249
+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1637 TPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTS 1696
Query: 248 TGQYTP 231
G Y+P
Sbjct: 1697 PG-YSP 1701
Score = 139 bits (349), Expect = 2e-31
Identities = 75/118 (63%), Positives = 83/118 (70%), Gaps = 2/118 (1%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYS 402
SP YSPTSP+Y P SP Y P SPSY+P S YSP+ SPS YSPTSPNYS
Sbjct: 1454 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPT---SPS---------YSPTSPNYS 1501
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
PTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1502 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1558
Score = 134 bits (338), Expect = 4e-30
Identities = 68/111 (61%), Positives = 80/111 (72%), Gaps = 12/111 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP--------SIAYSPSNARLSPA 435
YSPTSP YSP+SP YSPTSP Y PTSP+Y+P + KYSP S Y+P++ + SP
Sbjct: 1605 YSPTSPNYSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1664
Query: 434 SP-YSPTSPNYSPTSPSYSPTSP---SYSPSSPTYSPSSPYSSGASPDYSP 294
SP YSPTSP YSPTSP+YSPTSP +YSP+SP YSP+SP S SP SP
Sbjct: 1665 SPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1715
Score = 128 bits (321), Expect = 4e-28
Identities = 67/103 (65%), Positives = 77/103 (74%), Gaps = 5/103 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPT+P Y PTSP+Y+P S Y+P S YSP++ SP SP YSPT
Sbjct: 1619 YSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPT 1678
Query: 416 SPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 297
SP YSPTSP +YSPTSP YSP+SPTYS +SP SPD S
Sbjct: 1679 SPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISPDDS 1718
[50][TOP]
>UniRef100_UPI00005A0B21 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 12 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B21
Length = 1922
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1688 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1746
Query: 239 YTP 231
Y+P
Sbjct: 1747 YSP 1749
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS Y+PT P YSP+S
Sbjct: 1709 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSP-S 1767
Query: 239 YTP 231
Y+P
Sbjct: 1768 YSP 1770
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1674 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1732
Query: 239 YTP 231
Y+P
Sbjct: 1733 YSP 1735
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1667 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1725
Query: 239 YTP 231
Y+P
Sbjct: 1726 YSP 1728
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1592 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1651
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1652 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1711
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1712 YSPTSP-SYSP 1721
Score = 157 bits (397), Expect = 6e-37
Identities = 78/119 (65%), Positives = 91/119 (76%), Gaps = 6/119 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 414
+PTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPTS
Sbjct: 1785 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1844
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
P YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1845 PTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1903
Score = 155 bits (391), Expect = 3e-36
Identities = 84/139 (60%), Positives = 95/139 (68%), Gaps = 19/139 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSPS Y+P++ SP SP YSPT
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1771
Query: 416 SPNYSP----------------TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 288
SPNY+P TSPSYSP+SP Y+P+SP YSP+SP S SP YSP S
Sbjct: 1772 SPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1831
Query: 287 GYSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1832 TYSPTTPKYSPTSP-TYSP 1849
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1791 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1850
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1851 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1907
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1908 LTSPA-ISPDDSDEEN 1922
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1570 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1629
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1630 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1690 SYSPTSP-SYSP 1700
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1557 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1616
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1617 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1676
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1677 YSPTSPSYSPTSP-SYSP 1693
Score = 59.7 bits (143), Expect = 2e-07
Identities = 52/128 (40%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Frame = -3
Query: 572 GYSPT-SPSYSPTSPSYGP---TSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT-SPN 408
G SP +P +P+Y P P +A +SPS A S AS +SP SP
Sbjct: 1512 GISPAMTPWNQGATPAYDPDPGAGSGMTPGAAGFSPSAA--------SDASGFSPGYSPA 1563
Query: 407 YSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGASP-DYSP-SAGYSPTLPGYSP 255
+SPT S PS Y PS SP+YSP+SP SP Y+P S YSPT P YSP
Sbjct: 1564 WSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSP 1623
Query: 254 SSTGQYTP 231
+S Y+P
Sbjct: 1624 TSP-SYSP 1630
[51][TOP]
>UniRef100_UPI00005A0B20 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 11 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B20
Length = 1923
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1747
Query: 239 YTP 231
Y+P
Sbjct: 1748 YSP 1750
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1709
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS Y+PT P YSP+S
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSP-S 1768
Query: 239 YTP 231
Y+P
Sbjct: 1769 YSP 1771
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1675 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1733
Query: 239 YTP 231
Y+P
Sbjct: 1734 YSP 1736
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1668 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1726
Query: 239 YTP 231
Y+P
Sbjct: 1727 YSP 1729
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1593 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1652
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1653 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1713 YSPTSP-SYSP 1722
Score = 157 bits (397), Expect = 6e-37
Identities = 78/119 (65%), Positives = 91/119 (76%), Gaps = 6/119 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 414
+PTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPTS
Sbjct: 1786 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1845
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
P YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1846 PTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1904
Score = 155 bits (391), Expect = 3e-36
Identities = 84/139 (60%), Positives = 95/139 (68%), Gaps = 19/139 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSPS Y+P++ SP SP YSPT
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1772
Query: 416 SPNYSP----------------TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 288
SPNY+P TSPSYSP+SP Y+P+SP YSP+SP S SP YSP S
Sbjct: 1773 SPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1832
Query: 287 GYSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1833 TYSPTTPKYSPTSP-TYSP 1850
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1792 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1851
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1852 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1908
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1909 LTSPA-ISPDDSDEEN 1923
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1571 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1630
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1691 SYSPTSP-SYSP 1701
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1558 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1618 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1678 YSPTSPSYSPTSP-SYSP 1694
Score = 59.7 bits (143), Expect = 2e-07
Identities = 52/128 (40%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Frame = -3
Query: 572 GYSPT-SPSYSPTSPSYGP---TSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT-SPN 408
G SP +P +P+Y P P +A +SPS A S AS +SP SP
Sbjct: 1513 GISPAMTPWNQGATPAYDPDPGAGSGMTPGAAGFSPSAA--------SDASGFSPGYSPA 1564
Query: 407 YSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGASP-DYSP-SAGYSPTLPGYSP 255
+SPT S PS Y PS SP+YSP+SP SP Y+P S YSPT P YSP
Sbjct: 1565 WSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSP 1624
Query: 254 SSTGQYTP 231
+S Y+P
Sbjct: 1625 TSP-SYSP 1631
[52][TOP]
>UniRef100_UPI00005A0B1E PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 9 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1E
Length = 1851
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1566 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1626 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1684
Query: 239 YTP 231
Y+P
Sbjct: 1685 YSP 1687
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS Y+PT P YSP+S
Sbjct: 1647 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSP-S 1705
Query: 239 YTP 231
Y+P
Sbjct: 1706 YSP 1708
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1552 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1611
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1670
Query: 239 YTP 231
Y+P
Sbjct: 1671 YSP 1673
Score = 169 bits (428), Expect = 2e-40
Identities = 85/123 (69%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSP+
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1688
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
PNY+PTSPSYSPTSPSYSPSSP+YSP+SP + SP YSPS+ Y+PT P YSP+S +
Sbjct: 1689 RPNYTPTSPSYSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSP-K 1747
Query: 239 YTP 231
Y+P
Sbjct: 1748 YSP 1750
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1545 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1605 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1663
Query: 239 YTP 231
Y+P
Sbjct: 1664 YSP 1666
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1530 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1589
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1590 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1649
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1650 YSPTSP-SYSP 1659
Score = 165 bits (417), Expect = 3e-39
Identities = 84/123 (68%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSPS Y+P++ SP SP YSP+
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPS 1709
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP S YSPT P YSP +T +
Sbjct: 1710 SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPK 1768
Query: 239 YTP 231
Y+P
Sbjct: 1769 YSP 1771
Score = 161 bits (407), Expect = 4e-38
Identities = 80/120 (66%), Positives = 92/120 (76%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPT
Sbjct: 1713 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1772
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1773 SPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1832
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1720 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1779
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1780 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1836
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1837 LTSPA-ISPDDSDEEN 1851
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1508 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1567
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1568 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1627
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1628 SYSPTSP-SYSP 1638
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1495 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1554
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1555 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1614
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1615 YSPTSPSYSPTSP-SYSP 1631
[53][TOP]
>UniRef100_UPI00005A0B1D PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=2 Tax=Canis lupus familiaris
RepID=UPI00005A0B1D
Length = 1764
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1604 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1663
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1664 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1722
Query: 239 YTP 231
Y+P
Sbjct: 1723 YSP 1725
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1684
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS Y+PT P YSP+S
Sbjct: 1685 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSP-S 1743
Query: 239 YTP 231
Y+P
Sbjct: 1744 YSP 1746
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1590 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1649
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1650 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1708
Query: 239 YTP 231
Y+P
Sbjct: 1709 YSP 1711
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1583 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1642
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1643 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1701
Query: 239 YTP 231
Y+P
Sbjct: 1702 YSP 1704
Score = 166 bits (419), Expect = 2e-39
Identities = 82/117 (70%), Positives = 92/117 (78%), Gaps = 3/117 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1705
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP S Y+P P YSP+S
Sbjct: 1706 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTS 1762
Score = 158 bits (399), Expect = 3e-37
Identities = 86/130 (66%), Positives = 95/130 (73%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1632 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1691
Query: 416 SPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
SP+YSPTSPSYSPTSPSYS P+SP YSPS P + SP YSP S YSPT P Y
Sbjct: 1692 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNY 1751
Query: 260 SPSSTGQYTP 231
+P S Y+P
Sbjct: 1752 TPMSP-NYSP 1760
Score = 145 bits (365), Expect = 3e-33
Identities = 70/98 (71%), Positives = 79/98 (80%), Gaps = 2/98 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSP+
Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1726
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
PNY+PTSPSYSPTSPSYSP+SP Y+P SP S SP+
Sbjct: 1727 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1764
Score = 139 bits (349), Expect = 2e-31
Identities = 75/118 (63%), Positives = 83/118 (70%), Gaps = 2/118 (1%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYS 402
SP YSPTSP+Y P SP Y P SPSY+P S YSP+ SPS YSPTSPNYS
Sbjct: 1565 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPT---SPS---------YSPTSPNYS 1612
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
PTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1613 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1669
Score = 98.2 bits (243), Expect = 4e-19
Identities = 64/139 (46%), Positives = 80/139 (57%), Gaps = 19/139 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPSI-AYSPS-NARLSPASPYSP 420
Y P P + + ++PS G SP+ P + +P+ A+SPS +SP+ YSP
Sbjct: 1513 YGMEIPTNIPATGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGGAMSPS--YSP 1570
Query: 419 TS---------------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 288
TS P+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP S
Sbjct: 1571 TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1630
Query: 287 GYSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1631 SYSPTSPSYSPTSP-SYSP 1648
[54][TOP]
>UniRef100_UPI00005A0B1C PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 8 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1C
Length = 1719
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1559 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1619 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1677
Query: 239 YTP 231
Y+P
Sbjct: 1678 YSP 1680
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1639
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS Y+PT P YSP+S
Sbjct: 1640 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSP-S 1698
Query: 239 YTP 231
Y+P
Sbjct: 1699 YSP 1701
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1545 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1605 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1663
Query: 239 YTP 231
Y+P
Sbjct: 1664 YSP 1666
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1538 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1597
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1598 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1656
Query: 239 YTP 231
Y+P
Sbjct: 1657 YSP 1659
Score = 166 bits (419), Expect = 2e-39
Identities = 82/117 (70%), Positives = 92/117 (78%), Gaps = 3/117 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP S Y+P P YSP+S
Sbjct: 1661 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTS 1717
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1523 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1582
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1583 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1642
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1643 YSPTSP-SYSP 1652
Score = 158 bits (399), Expect = 3e-37
Identities = 86/130 (66%), Positives = 95/130 (73%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1646
Query: 416 SPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
SP+YSPTSPSYSPTSPSYS P+SP YSPS P + SP YSP S YSPT P Y
Sbjct: 1647 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNY 1706
Query: 260 SPSSTGQYTP 231
+P S Y+P
Sbjct: 1707 TPMSP-NYSP 1715
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1501 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1560
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1561 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1620
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1621 SYSPTSP-SYSP 1631
Score = 145 bits (365), Expect = 3e-33
Identities = 70/98 (71%), Positives = 79/98 (80%), Gaps = 2/98 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSP+
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1681
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
PNY+PTSPSYSPTSPSYSP+SP Y+P SP S SP+
Sbjct: 1682 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1719
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1488 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1547
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1548 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1607
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1608 YSPTSPSYSPTSP-SYSP 1624
Score = 93.6 bits (231), Expect = 1e-17
Identities = 60/125 (48%), Positives = 73/125 (58%), Gaps = 26/125 (20%)
Frame = -3
Query: 527 YGPTSPSYNPQSAKYSP--SIAYSP---SNARLSPASPYSPT-----SPNYSPT------ 396
YG P+ P ++ +SP S A+SP S P+SPY P+ SP+YSPT
Sbjct: 1473 YGMEIPTNIPDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEP 1532
Query: 395 ---------SPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSST 246
SPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1533 RSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 1592
Query: 245 GQYTP 231
Y+P
Sbjct: 1593 -SYSP 1596
[55][TOP]
>UniRef100_UPI00005A0B1B PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 7 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1B
Length = 1858
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1559 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1618
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1619 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1677
Query: 239 YTP 231
Y+P
Sbjct: 1678 YSP 1680
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1639
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS Y+PT P YSP+S
Sbjct: 1640 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSP-S 1698
Query: 239 YTP 231
Y+P
Sbjct: 1699 YSP 1701
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1545 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1605 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1663
Query: 239 YTP 231
Y+P
Sbjct: 1664 YSP 1666
Score = 169 bits (428), Expect = 2e-40
Identities = 87/130 (66%), Positives = 97/130 (74%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1601 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1660
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP--------SAGYSPTLPGY 261
SP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP S YSPT P Y
Sbjct: 1661 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSY 1720
Query: 260 SPSSTGQYTP 231
SP+S +YTP
Sbjct: 1721 SPTSP-KYTP 1729
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1538 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1597
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1598 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1656
Query: 239 YTP 231
Y+P
Sbjct: 1657 YSP 1659
Score = 166 bits (419), Expect = 2e-39
Identities = 83/123 (67%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSPS Y+P++ SP SP YSPT
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1702
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SPNY+P SP+YSPTSPSYSP+SP Y+P+SP S +SP+Y+P S YSPT P YSP+S +
Sbjct: 1703 SPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP-K 1761
Query: 239 YTP 231
Y+P
Sbjct: 1762 YSP 1764
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1523 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1582
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1583 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1642
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1643 YSPTSP-SYSP 1652
Score = 162 bits (409), Expect = 2e-38
Identities = 81/127 (63%), Positives = 92/127 (72%), Gaps = 13/127 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSP Y+PTSPSY P+SP Y P S KYSP S YSP++ + SP SP
Sbjct: 1713 YSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPT 1772
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTL 270
YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT
Sbjct: 1773 TPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTS 1832
Query: 269 PGYSPSS 249
PGYSP+S
Sbjct: 1833 PGYSPTS 1839
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1727 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1786
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1787 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1843
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1844 LTSPA-ISPDDSDEEN 1858
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1501 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1560
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1561 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1620
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1621 SYSPTSP-SYSP 1631
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1488 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1547
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1548 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1607
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1608 YSPTSPSYSPTSP-SYSP 1624
Score = 93.6 bits (231), Expect = 1e-17
Identities = 60/125 (48%), Positives = 73/125 (58%), Gaps = 26/125 (20%)
Frame = -3
Query: 527 YGPTSPSYNPQSAKYSP--SIAYSP---SNARLSPASPYSPT-----SPNYSPT------ 396
YG P+ P ++ +SP S A+SP S P+SPY P+ SP+YSPT
Sbjct: 1473 YGMEIPTNIPDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEP 1532
Query: 395 ---------SPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSST 246
SPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1533 RSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 1592
Query: 245 GQYTP 231
Y+P
Sbjct: 1593 -SYSP 1596
[56][TOP]
>UniRef100_UPI00005A0B1A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 6 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1A
Length = 1767
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1607 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1667 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1725
Query: 239 YTP 231
Y+P
Sbjct: 1726 YSP 1728
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS Y+PT P YSP+S
Sbjct: 1688 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSP-S 1746
Query: 239 YTP 231
Y+P
Sbjct: 1747 YSP 1749
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1593 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1652
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1653 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1711
Query: 239 YTP 231
Y+P
Sbjct: 1712 YSP 1714
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1586 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1645
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1646 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1704
Query: 239 YTP 231
Y+P
Sbjct: 1705 YSP 1707
Score = 166 bits (419), Expect = 2e-39
Identities = 82/117 (70%), Positives = 92/117 (78%), Gaps = 3/117 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP S Y+P P YSP+S
Sbjct: 1709 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTS 1765
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1571 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1630
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1631 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1690
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1691 YSPTSP-SYSP 1700
Score = 158 bits (399), Expect = 3e-37
Identities = 86/130 (66%), Positives = 95/130 (73%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 416 SPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
SP+YSPTSPSYSPTSPSYS P+SP YSPS P + SP YSP S YSPT P Y
Sbjct: 1695 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNY 1754
Query: 260 SPSSTGQYTP 231
+P S Y+P
Sbjct: 1755 TPMSP-NYSP 1763
Score = 145 bits (365), Expect = 3e-33
Identities = 70/98 (71%), Positives = 79/98 (80%), Gaps = 2/98 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSP+
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1729
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
PNY+PTSPSYSPTSPSYSP+SP Y+P SP S SP+
Sbjct: 1730 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1767
Score = 139 bits (349), Expect = 2e-31
Identities = 75/118 (63%), Positives = 83/118 (70%), Gaps = 2/118 (1%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYS 402
SP YSPTSP+Y P SP Y P SPSY+P S YSP+ SPS YSPTSPNYS
Sbjct: 1568 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPT---SPS---------YSPTSPNYS 1615
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
PTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1616 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1672
Score = 95.5 bits (236), Expect = 3e-18
Identities = 63/163 (38%), Positives = 79/163 (48%), Gaps = 54/163 (33%)
Frame = -3
Query: 557 SPSYSPTSPSYGPTSPSYNPQS------AKYSPSIA------------------------ 468
SP+ +P + P +++P+S A +SPS A
Sbjct: 1490 SPAMTPWNQGATPAYGAWSPRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSP 1549
Query: 467 ---------------------YSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSP 357
YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP
Sbjct: 1550 GPSSPYIPSPGELSCGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSP 1609
Query: 356 SSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
+SP YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1610 TSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1651
Score = 73.2 bits (178), Expect = 1e-11
Identities = 55/127 (43%), Positives = 70/127 (55%), Gaps = 8/127 (6%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTS---PSYGPTSPSYNPQSAKYSP--SIAYSPSNARLSPASPYS 423
+P + G +P ++SP S P SPS ++ +SP S A+SP+ SP SP
Sbjct: 1494 TPWNQGATPAYGAWSPRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPG--SPGSP-G 1550
Query: 422 PTSPNY-SPTSPSYSPTSPSYSPSSPTYSPSSPYS-SGASPDYSP-SAGYSPTLPGYSPS 252
P+SP SP S SPSYSP+SP Y P SP + SP YSP S YSPT P YSP+
Sbjct: 1551 PSSPYIPSPGELSCGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPT 1610
Query: 251 STGQYTP 231
S Y+P
Sbjct: 1611 SP-NYSP 1616
[57][TOP]
>UniRef100_UPI00005A0B19 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 5 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B19
Length = 1693
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1533 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1592
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1593 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1651
Query: 239 YTP 231
Y+P
Sbjct: 1652 YSP 1654
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1554 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1613
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS Y+PT P YSP+S
Sbjct: 1614 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSP-S 1672
Query: 239 YTP 231
Y+P
Sbjct: 1673 YSP 1675
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1519 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1578
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1579 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1637
Query: 239 YTP 231
Y+P
Sbjct: 1638 YSP 1640
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1512 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1571
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1572 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1630
Query: 239 YTP 231
Y+P
Sbjct: 1631 YSP 1633
Score = 166 bits (419), Expect = 2e-39
Identities = 82/117 (70%), Positives = 92/117 (78%), Gaps = 3/117 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1575 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1634
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP S Y+P P YSP+S
Sbjct: 1635 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTS 1691
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1497 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1556
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1557 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1616
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1617 YSPTSP-SYSP 1626
Score = 158 bits (399), Expect = 3e-37
Identities = 86/130 (66%), Positives = 95/130 (73%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1561 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1620
Query: 416 SPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
SP+YSPTSPSYSPTSPSYS P+SP YSPS P + SP YSP S YSPT P Y
Sbjct: 1621 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNY 1680
Query: 260 SPSSTGQYTP 231
+P S Y+P
Sbjct: 1681 TPMSP-NYSP 1689
Score = 145 bits (365), Expect = 3e-33
Identities = 70/98 (71%), Positives = 79/98 (80%), Gaps = 2/98 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSP+
Sbjct: 1596 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1655
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
PNY+PTSPSYSPTSPSYSP+SP Y+P SP S SP+
Sbjct: 1656 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1693
Score = 139 bits (349), Expect = 2e-31
Identities = 75/118 (63%), Positives = 83/118 (70%), Gaps = 2/118 (1%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYS 402
SP YSPTSP+Y P SP Y P SPSY+P S YSP+ SPS YSPTSPNYS
Sbjct: 1494 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPT---SPS---------YSPTSPNYS 1541
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
PTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1542 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1598
Score = 88.6 bits (218), Expect = 3e-16
Identities = 50/94 (53%), Positives = 58/94 (61%), Gaps = 16/94 (17%)
Frame = -3
Query: 464 SPSNARLSPASPYSPTS---------------PNYSPTSPSYSPTSPSYSPSSPTYSPSS 330
+P A + + YSPTS P+YSPTSPSYSPTSPSYSP+SP YSP+S
Sbjct: 1485 TPGAAGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1544
Query: 329 PYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1545 PSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1577
Score = 81.3 bits (199), Expect = 5e-14
Identities = 45/88 (51%), Positives = 54/88 (61%), Gaps = 16/88 (18%)
Frame = -3
Query: 446 LSPASPYSPTSPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYSSGA 312
++P + SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S
Sbjct: 1484 MTPGAAGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1543
Query: 311 SPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP YSP S YSPT P YSP+S Y+P
Sbjct: 1544 SPSYSPTSPSYSPTSPSYSPTSP-SYSP 1570
[58][TOP]
>UniRef100_UPI00005A0B17 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B17
Length = 1788
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1688 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1746
Query: 239 YTP 231
Y+P
Sbjct: 1747 YSP 1749
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS Y+PT P YSP+S
Sbjct: 1709 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSP-S 1767
Query: 239 YTP 231
Y+P
Sbjct: 1768 YSP 1770
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1674 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1732
Query: 239 YTP 231
Y+P
Sbjct: 1733 YSP 1735
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1667 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1725
Query: 239 YTP 231
Y+P
Sbjct: 1726 YSP 1728
Score = 166 bits (419), Expect = 2e-39
Identities = 82/117 (70%), Positives = 92/117 (78%), Gaps = 3/117 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1729
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP YSP S Y+P P YSP+S
Sbjct: 1730 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTS 1786
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1592 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1651
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1652 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1711
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1712 YSPTSP-SYSP 1721
Score = 158 bits (399), Expect = 3e-37
Identities = 86/130 (66%), Positives = 95/130 (73%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1715
Query: 416 SPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
SP+YSPTSPSYSPTSPSYS P+SP YSPS P + SP YSP S YSPT P Y
Sbjct: 1716 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNY 1775
Query: 260 SPSSTGQYTP 231
+P S Y+P
Sbjct: 1776 TPMSP-NYSP 1784
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1570 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1629
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1630 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1690 SYSPTSP-SYSP 1700
Score = 145 bits (365), Expect = 3e-33
Identities = 70/98 (71%), Positives = 79/98 (80%), Gaps = 2/98 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSP+
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1750
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
PNY+PTSPSYSPTSPSYSP+SP Y+P SP S SP+
Sbjct: 1751 RPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1788
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1557 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1616
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1617 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1676
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1677 YSPTSPSYSPTSP-SYSP 1693
Score = 59.7 bits (143), Expect = 2e-07
Identities = 52/128 (40%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Frame = -3
Query: 572 GYSPT-SPSYSPTSPSYGP---TSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT-SPN 408
G SP +P +P+Y P P +A +SPS A S AS +SP SP
Sbjct: 1512 GISPAMTPWNQGATPAYDPDPGAGSGMTPGAAGFSPSAA--------SDASGFSPGYSPA 1563
Query: 407 YSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGASP-DYSP-SAGYSPTLPGYSP 255
+SPT S PS Y PS SP+YSP+SP SP Y+P S YSPT P YSP
Sbjct: 1564 WSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSP 1623
Query: 254 SSTGQYTP 231
+S Y+P
Sbjct: 1624 TSP-SYSP 1630
[59][TOP]
>UniRef100_UPI00005A0B16 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B16
Length = 1922
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1687
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1688 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1746
Query: 239 YTP 231
Y+P
Sbjct: 1747 YSP 1749
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSPS Y+PT P YSP+S
Sbjct: 1709 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSP-S 1767
Query: 239 YTP 231
Y+P
Sbjct: 1768 YSP 1770
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1674 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1732
Query: 239 YTP 231
Y+P
Sbjct: 1733 YSP 1735
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1607 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1666
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1667 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1725
Query: 239 YTP 231
Y+P
Sbjct: 1726 YSP 1728
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1592 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1651
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1652 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1711
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1712 YSPTSP-SYSP 1721
Score = 157 bits (397), Expect = 6e-37
Identities = 78/119 (65%), Positives = 91/119 (76%), Gaps = 6/119 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 414
+PTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPTS
Sbjct: 1785 TPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1844
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
P YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1845 PTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1903
Score = 155 bits (391), Expect = 3e-36
Identities = 84/139 (60%), Positives = 95/139 (68%), Gaps = 19/139 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSPS Y+P++ SP SP YSPT
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1771
Query: 416 SPNYSP----------------TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 288
SPNY+P TSPSYSP+SP Y+P+SP YSP+SP S SP YSP S
Sbjct: 1772 SPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1831
Query: 287 GYSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1832 TYSPTTPKYSPTSP-TYSP 1849
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1791 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1850
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1851 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1907
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1908 LTSPA-ISPDDSDEEN 1922
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1570 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1629
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1630 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1690 SYSPTSP-SYSP 1700
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1557 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1616
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1617 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1676
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1677 YSPTSPSYSPTSP-SYSP 1693
Score = 59.7 bits (143), Expect = 2e-07
Identities = 52/128 (40%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Frame = -3
Query: 572 GYSPT-SPSYSPTSPSYGP---TSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT-SPN 408
G SP +P +P+Y P P +A +SPS A S AS +SP SP
Sbjct: 1512 GISPAMTPWNQGATPAYDPDPGAGSGMTPGAAGFSPSAA--------SDASGFSPGYSPA 1563
Query: 407 YSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGASP-DYSP-SAGYSPTLPGYSP 255
+SPT S PS Y PS SP+YSP+SP SP Y+P S YSPT P YSP
Sbjct: 1564 WSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSP 1623
Query: 254 SSTGQYTP 231
+S Y+P
Sbjct: 1624 TSP-SYSP 1630
[60][TOP]
>UniRef100_UPI0001B7A25C UPI0001B7A25C related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25C
Length = 1968
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1631 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1690
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1691 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1749
Query: 239 YTP 231
Y+P
Sbjct: 1750 YSP 1752
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1652 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1711
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP S Y+PT P YSP+S
Sbjct: 1712 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP-S 1770
Query: 239 YTP 231
Y+P
Sbjct: 1771 YSP 1773
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1617 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1676
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1677 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1735
Query: 239 YTP 231
Y+P
Sbjct: 1736 YSP 1738
Score = 171 bits (433), Expect = 4e-41
Identities = 85/123 (69%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y+P S Y+P S +YSP++ SP SP Y+PT
Sbjct: 1722 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1781
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PS+ YSP+ P YSP+S +
Sbjct: 1782 SPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSP-K 1840
Query: 239 YTP 231
YTP
Sbjct: 1841 YTP 1843
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1610 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1669
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1670 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1728
Query: 239 YTP 231
Y+P
Sbjct: 1729 YSP 1731
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1595 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1654
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1655 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1714
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1715 YSPTSP-SYSP 1724
Score = 162 bits (411), Expect = 1e-38
Identities = 83/130 (63%), Positives = 98/130 (75%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSP+Y+PTSP+Y PTSPSY+P S YSP S +YSPS+ R +P SP
Sbjct: 1764 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1823
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP S YSPT P Y
Sbjct: 1824 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTY 1883
Query: 260 SPSSTGQYTP 231
SP +T +Y+P
Sbjct: 1884 SP-TTPKYSP 1892
Score = 161 bits (407), Expect = 4e-38
Identities = 80/120 (66%), Positives = 92/120 (76%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPT
Sbjct: 1834 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1893
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1894 SPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1953
Score = 156 bits (394), Expect = 1e-36
Identities = 81/126 (64%), Positives = 94/126 (74%), Gaps = 6/126 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP+SP YSPTSP Y+PTSPSY P+SP Y P S KYSP S YSP++ + SP SP YSPT
Sbjct: 1827 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPT 1886
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG---YSPSS 249
+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1887 TPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTS 1946
Query: 248 TGQYTP 231
G Y+P
Sbjct: 1947 PG-YSP 1951
Score = 150 bits (380), Expect = 6e-35
Identities = 76/123 (61%), Positives = 87/123 (70%), Gaps = 9/123 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1841 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1900
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1901 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1957
Query: 257 PSS 249
+S
Sbjct: 1958 LTS 1960
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1573 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1632
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1633 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1692
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1693 SYSPTSP-SYSP 1703
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1560 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1619
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1620 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1679
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1680 YSPTSPSYSPTSP-SYSP 1696
Score = 97.4 bits (241), Expect = 7e-19
Identities = 66/154 (42%), Positives = 84/154 (54%), Gaps = 38/154 (24%)
Frame = -3
Query: 578 SPGYSP----TSPSYSPTSPSYG----PTSPSYNPQSAK--------YSPSIAYSP-SNA 450
SP +P +P+Y SPS G P + ++P +A YSP+ + +P S
Sbjct: 1516 SPAMTPWNQGATPAYGAWSPSVGDGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPG 1575
Query: 449 RLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSS 330
P+SPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+S
Sbjct: 1576 SPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTS 1635
Query: 329 PYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1636 PNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1668
[61][TOP]
>UniRef100_UPI0001B7A25B UPI0001B7A25B related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25B
Length = 1932
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1591 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1650
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1651 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1709
Query: 239 YTP 231
Y+P
Sbjct: 1710 YSP 1712
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1671
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP S Y+PT P YSP+S
Sbjct: 1672 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP-S 1730
Query: 239 YTP 231
Y+P
Sbjct: 1731 YSP 1733
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1577 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1636
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1637 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1695
Query: 239 YTP 231
Y+P
Sbjct: 1696 YSP 1698
Score = 171 bits (433), Expect = 4e-41
Identities = 85/123 (69%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y+P S Y+P S +YSP++ SP SP Y+PT
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1741
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PS+ YSP+ P YSP+S +
Sbjct: 1742 SPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSP-K 1800
Query: 239 YTP 231
YTP
Sbjct: 1801 YTP 1803
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1570 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1630 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1688
Query: 239 YTP 231
Y+P
Sbjct: 1689 YSP 1691
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1555 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1614
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1615 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1674
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1675 YSPTSP-SYSP 1684
Score = 162 bits (411), Expect = 1e-38
Identities = 83/130 (63%), Positives = 98/130 (75%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSP+Y+PTSP+Y PTSPSY+P S YSP S +YSPS+ R +P SP
Sbjct: 1724 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1783
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP S YSPT P Y
Sbjct: 1784 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTY 1843
Query: 260 SPSSTGQYTP 231
SP +T +Y+P
Sbjct: 1844 SP-TTPKYSP 1852
Score = 161 bits (407), Expect = 4e-38
Identities = 80/120 (66%), Positives = 92/120 (76%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPT
Sbjct: 1794 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1853
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1854 SPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1913
Score = 152 bits (385), Expect = 1e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1801 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1860
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1861 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1917
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1918 LTSPA-ISPEDSDEEN 1932
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1533 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1592
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1593 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1652
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1653 SYSPTSP-SYSP 1663
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1520 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1579
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1580 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1639
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1640 YSPTSPSYSPTSP-SYSP 1656
Score = 94.7 bits (234), Expect = 5e-18
Identities = 64/141 (45%), Positives = 81/141 (57%), Gaps = 22/141 (15%)
Frame = -3
Query: 587 SPTSPGYSPTSPS-YSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT-- 417
+P + G+SP++ S S SP Y SP+++P +P SP P+SPY P+
Sbjct: 1502 TPGAAGFSPSAASDASGFSPGY---SPAWSP-----TPGSPGSPG-----PSSPYIPSPG 1548
Query: 416 ---SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 294
SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1549 GAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPT 1608
Query: 293 SAGYSPTLPGYSPSSTGQYTP 231
S YSPT P YSP+S Y+P
Sbjct: 1609 SPSYSPTSPSYSPTSP-SYSP 1628
[62][TOP]
>UniRef100_UPI0000DA33D8 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Rattus norvegicus RepID=UPI0000DA33D8
Length = 1970
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1747
Query: 239 YTP 231
Y+P
Sbjct: 1748 YSP 1750
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1709
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP S Y+PT P YSP+S
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP-S 1768
Query: 239 YTP 231
Y+P
Sbjct: 1769 YSP 1771
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1675 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1733
Query: 239 YTP 231
Y+P
Sbjct: 1734 YSP 1736
Score = 171 bits (433), Expect = 4e-41
Identities = 85/123 (69%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y+P S Y+P S +YSP++ SP SP Y+PT
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PS+ YSP+ P YSP+S +
Sbjct: 1780 SPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSP-K 1838
Query: 239 YTP 231
YTP
Sbjct: 1839 YTP 1841
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1668 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1726
Query: 239 YTP 231
Y+P
Sbjct: 1727 YSP 1729
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1593 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1652
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1653 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1713 YSPTSP-SYSP 1722
Score = 162 bits (411), Expect = 1e-38
Identities = 83/130 (63%), Positives = 98/130 (75%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSP+Y+PTSP+Y PTSPSY+P S YSP S +YSPS+ R +P SP
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1821
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP S YSPT P Y
Sbjct: 1822 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTY 1881
Query: 260 SPSSTGQYTP 231
SP +T +Y+P
Sbjct: 1882 SP-TTPKYSP 1890
Score = 161 bits (407), Expect = 4e-38
Identities = 80/120 (66%), Positives = 92/120 (76%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPT
Sbjct: 1832 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1891
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1892 SPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1951
Score = 152 bits (385), Expect = 1e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1839 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1898
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1899 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1955
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1956 LTSPA-ISPEDSDEEN 1970
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1571 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1630
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1691 SYSPTSP-SYSP 1701
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1558 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1618 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1678 YSPTSPSYSPTSP-SYSP 1694
Score = 97.4 bits (241), Expect = 7e-19
Identities = 66/154 (42%), Positives = 84/154 (54%), Gaps = 38/154 (24%)
Frame = -3
Query: 578 SPGYSP----TSPSYSPTSPSYG----PTSPSYNPQSAK--------YSPSIAYSP-SNA 450
SP +P +P+Y SPS G P + ++P +A YSP+ + +P S
Sbjct: 1514 SPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPG 1573
Query: 449 RLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSS 330
P+SPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+S
Sbjct: 1574 SPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTS 1633
Query: 329 PYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1634 PNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
[63][TOP]
>UniRef100_O35559 DNA-directed RNA polymerase n=1 Tax=Cricetulus griseus
RepID=O35559_CRIGR
Length = 1970
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1747
Query: 239 YTP 231
Y+P
Sbjct: 1748 YSP 1750
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1709
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP S Y+PT P YSP+S
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP-S 1768
Query: 239 YTP 231
Y+P
Sbjct: 1769 YSP 1771
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1675 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1733
Query: 239 YTP 231
Y+P
Sbjct: 1734 YSP 1736
Score = 171 bits (433), Expect = 4e-41
Identities = 85/123 (69%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y+P S Y+P S +YSP++ SP SP Y+PT
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PS+ YSP+ P YSP+S +
Sbjct: 1780 SPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSP-K 1838
Query: 239 YTP 231
YTP
Sbjct: 1839 YTP 1841
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1668 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1726
Query: 239 YTP 231
Y+P
Sbjct: 1727 YSP 1729
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1593 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1652
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1653 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1713 YSPTSP-SYSP 1722
Score = 162 bits (411), Expect = 1e-38
Identities = 83/130 (63%), Positives = 98/130 (75%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSP+Y+PTSP+Y PTSPSY+P S YSP S +YSPS+ R +P SP
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1821
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP S YSPT P Y
Sbjct: 1822 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTY 1881
Query: 260 SPSSTGQYTP 231
SP +T +Y+P
Sbjct: 1882 SP-TTPKYSP 1890
Score = 161 bits (407), Expect = 4e-38
Identities = 80/120 (66%), Positives = 92/120 (76%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPT
Sbjct: 1832 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1891
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1892 SPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1951
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1839 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1898
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1899 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1955
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1956 LTSPA-ISPDDSDEEN 1970
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1571 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1630
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1691 SYSPTSP-SYSP 1701
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1558 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1618 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1678 YSPTSPSYSPTSP-SYSP 1694
Score = 97.4 bits (241), Expect = 7e-19
Identities = 66/154 (42%), Positives = 84/154 (54%), Gaps = 38/154 (24%)
Frame = -3
Query: 578 SPGYSP----TSPSYSPTSPSYG----PTSPSYNPQSAK--------YSPSIAYSP-SNA 450
SP +P +P+Y SPS G P + ++P +A YSP+ + +P S
Sbjct: 1514 SPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPG 1573
Query: 449 RLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSS 330
P+SPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+S
Sbjct: 1574 SPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTS 1633
Query: 329 PYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1634 PNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
[64][TOP]
>UniRef100_O08847 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=O08847_MOUSE
Length = 1966
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1747
Query: 239 YTP 231
Y+P
Sbjct: 1748 YSP 1750
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1709
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP S Y+PT P YSP+S
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP-S 1768
Query: 239 YTP 231
Y+P
Sbjct: 1769 YSP 1771
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1675 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1733
Query: 239 YTP 231
Y+P
Sbjct: 1734 YSP 1736
Score = 171 bits (433), Expect = 4e-41
Identities = 85/123 (69%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y+P S Y+P S +YSP++ SP SP Y+PT
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PS+ YSP+ P YSP+S +
Sbjct: 1780 SPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSP-K 1838
Query: 239 YTP 231
YTP
Sbjct: 1839 YTP 1841
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1668 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1726
Query: 239 YTP 231
Y+P
Sbjct: 1727 YSP 1729
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1593 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1652
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1653 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1713 YSPTSP-SYSP 1722
Score = 164 bits (416), Expect = 4e-39
Identities = 83/129 (64%), Positives = 101/129 (78%), Gaps = 9/129 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+Y+PTSP+Y PTSPSY+P S YSP S +YSPS+ R +P SP Y+P+
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1821
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS--- 249
SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + ASP YSP S YSPT P YSP+S
Sbjct: 1822 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTY 1881
Query: 248 ---TGQYTP 231
T +Y+P
Sbjct: 1882 SPTTPKYSP 1890
Score = 160 bits (405), Expect = 7e-38
Identities = 80/127 (62%), Positives = 92/127 (72%), Gaps = 13/127 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSP+SP YSPTSP Y+PTSPSY P+SP Y P S KYSP S YSP++ + SP SP
Sbjct: 1825 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPT 1884
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTL 270
YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT
Sbjct: 1885 TPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTS 1944
Query: 269 PGYSPSS 249
PGYSP+S
Sbjct: 1945 PGYSPTS 1951
Score = 149 bits (376), Expect = 2e-34
Identities = 81/134 (60%), Positives = 94/134 (70%), Gaps = 14/134 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+PTSP YSPTSPSYSPTSPSY PTSPSY+P S +Y+P S Y+PS+ SP+SP YSPT
Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPT 1835
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP-----------SSPYSSGASPDYSPSA-GYSPT 273
SP Y+PTSPSYSP+SP Y+P+SP YSP SP SP YSP+ YSPT
Sbjct: 1836 SPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSP----TSPTYSPTTPKYSPT 1891
Query: 272 LPGYSPSSTGQYTP 231
P YSP+S YTP
Sbjct: 1892 SPTYSPTSP-VYTP 1904
Score = 149 bits (376), Expect = 2e-34
Identities = 80/133 (60%), Positives = 96/133 (72%), Gaps = 13/133 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P+SP YSP+SPSYSPTSP Y PTSPSY+P S +Y+P S YSP++ + SP SP YSPT
Sbjct: 1818 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPT 1877
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG-------- 264
SP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP S YSPT P
Sbjct: 1878 SPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKG 1937
Query: 263 --YSPSSTGQYTP 231
YSP+S G Y+P
Sbjct: 1938 STYSPTSPG-YSP 1949
Score = 149 bits (375), Expect = 2e-34
Identities = 75/123 (60%), Positives = 86/123 (69%), Gaps = 9/123 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+P SP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1839 YTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1898
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1899 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1955
Query: 257 PSS 249
+S
Sbjct: 1956 LTS 1958
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1571 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1630
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1691 SYSPTSP-SYSP 1701
Score = 133 bits (334), Expect = 1e-29
Identities = 67/103 (65%), Positives = 78/103 (75%), Gaps = 5/103 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSP+Y PT+P Y+P S YSP S Y+P++ + SP SP YSPT
Sbjct: 1860 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1919
Query: 416 SPNYSPTSPSYSPTSP---SYSPSSPTYSPSSPYSSGASPDYS 297
SP YSPTSP+YSPTSP +YSP+SP YSP+SP S SP S
Sbjct: 1920 SPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAIS 1962
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1558 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1618 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1678 YSPTSPSYSPTSP-SYSP 1694
Score = 97.4 bits (241), Expect = 7e-19
Identities = 66/154 (42%), Positives = 84/154 (54%), Gaps = 38/154 (24%)
Frame = -3
Query: 578 SPGYSP----TSPSYSPTSPSYG----PTSPSYNPQSAK--------YSPSIAYSP-SNA 450
SP +P +P+Y SPS G P + ++P +A YSP+ + +P S
Sbjct: 1514 SPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPG 1573
Query: 449 RLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSS 330
P+SPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+S
Sbjct: 1574 SPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTS 1633
Query: 329 PYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1634 PNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
[65][TOP]
>UniRef100_B4DET1 cDNA FLJ53860, highly similar to DNA-directed RNA polymerase II
largest subunit (EC 2.7.7.6) n=1 Tax=Homo sapiens
RepID=B4DET1_HUMAN
Length = 855
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 528 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 587
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 588 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 646
Query: 239 YTP 231
Y+P
Sbjct: 647 YSP 649
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 549 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 608
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP S Y+PT P YSP+S
Sbjct: 609 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP-S 667
Query: 239 YTP 231
Y+P
Sbjct: 668 YSP 670
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 514 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 573
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 574 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 632
Query: 239 YTP 231
Y+P
Sbjct: 633 YSP 635
Score = 172 bits (435), Expect = 2e-41
Identities = 90/145 (62%), Positives = 107/145 (73%), Gaps = 3/145 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y+P S Y+P S +YSP++ SP SP Y+PT
Sbjct: 619 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 678
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PS+ YSP+ P YSP+S +
Sbjct: 679 SPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSP-K 737
Query: 239 YTPHEGDKKDKTGKKDASKDDKGNP 165
YTP K T K + K +P
Sbjct: 738 YTP-TSPKYSPTSPKYSPTSPKYSP 761
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 507 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 566
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 567 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 625
Query: 239 YTP 231
Y+P
Sbjct: 626 YSP 628
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 492 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 551
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 552 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 611
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 612 YSPTSP-SYSP 621
Score = 159 bits (401), Expect = 2e-37
Identities = 78/120 (65%), Positives = 91/120 (75%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P+SP YSP+SPSYSPTSP Y PTSP Y+P S KYSP S YSP++ SP +P YSPT
Sbjct: 717 YTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 776
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP Y+PTSP YSP+ PTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 777 SPTYSPTSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 836
Score = 152 bits (383), Expect = 2e-35
Identities = 78/136 (57%), Positives = 93/136 (68%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSP+SP YSPTSP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 724 YSPSSPSYSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 783
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPT P+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 784 SPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 840
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 841 LTSPA-ISPDDSDEEN 855
Score = 147 bits (371), Expect = 6e-34
Identities = 84/151 (55%), Positives = 97/151 (64%), Gaps = 31/151 (20%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSP+Y P S YSP S +YSP++ +P SP YSPT
Sbjct: 626 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 685
Query: 416 SPNYSPTSPSYSPTSPSYS----------------------------PSSPTYSPSSPYS 321
SP+YSPTSPSYSPTSPSYS P+SP Y+P+SP
Sbjct: 686 SPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPKY 745
Query: 320 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
S SP YSP S YSPT P YSP +T +Y+P
Sbjct: 746 SPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 775
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 470 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 529
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 530 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 589
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 590 SYSPTSP-SYSP 600
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 457 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 516
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 517 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 576
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 577 YSPTSPSYSPTSP-SYSP 593
Score = 97.4 bits (241), Expect = 7e-19
Identities = 66/154 (42%), Positives = 84/154 (54%), Gaps = 38/154 (24%)
Frame = -3
Query: 578 SPGYSP----TSPSYSPTSPSYG----PTSPSYNPQSAK--------YSPSIAYSP-SNA 450
SP +P +P+Y SPS G P + ++P +A YSP+ + +P S
Sbjct: 413 SPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPG 472
Query: 449 RLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSS 330
P+SPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+S
Sbjct: 473 SPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTS 532
Query: 329 PYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P S SP YSP S YSPT P YSP+S Y+P
Sbjct: 533 PNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 565
[66][TOP]
>UniRef100_A6NN93 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=A6NN93_HUMAN
Length = 1970
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1747
Query: 239 YTP 231
Y+P
Sbjct: 1748 YSP 1750
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1709
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP S Y+PT P YSP+S
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP-S 1768
Query: 239 YTP 231
Y+P
Sbjct: 1769 YSP 1771
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1675 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1733
Query: 239 YTP 231
Y+P
Sbjct: 1734 YSP 1736
Score = 171 bits (433), Expect = 4e-41
Identities = 85/123 (69%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y+P S Y+P S +YSP++ SP SP Y+PT
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PS+ YSP+ P YSP+S +
Sbjct: 1780 SPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPASP-K 1838
Query: 239 YTP 231
YTP
Sbjct: 1839 YTP 1841
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1668 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1726
Query: 239 YTP 231
Y+P
Sbjct: 1727 YSP 1729
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1593 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1652
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1653 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1713 YSPTSP-SYSP 1722
Score = 160 bits (406), Expect = 5e-38
Identities = 82/130 (63%), Positives = 97/130 (74%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSP+Y+PTSP+Y PTSPSY+P S YSP S +YSPS+ R +P SP
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1821
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
YSP+SP+YSP SP Y+PTSPSYSPSSP Y+P+SP S SP YSP S YSPT P Y
Sbjct: 1822 SPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTY 1881
Query: 260 SPSSTGQYTP 231
SP +T +Y+P
Sbjct: 1882 SP-TTPKYSP 1890
Score = 159 bits (403), Expect = 1e-37
Identities = 85/137 (62%), Positives = 99/137 (72%), Gaps = 17/137 (12%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSP+Y P S YSP S +YSP++ +P SP YSPT
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPT 1786
Query: 416 SPNYSPTSPSYSPTSPSYSPSSP--------------TYSPSSPYSSGASPDYSP-SAGY 282
SP+YSPTSPSYSPTSPSYSPSSP +YSPSSP S ASP Y+P S Y
Sbjct: 1787 SPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSY 1846
Query: 281 SPTLPGYSPSSTGQYTP 231
SP+ P Y+P+S +Y+P
Sbjct: 1847 SPSSPEYTPTSP-KYSP 1862
Score = 159 bits (402), Expect = 2e-37
Identities = 79/120 (65%), Positives = 91/120 (75%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP SP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPT
Sbjct: 1832 YSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1891
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1892 SPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1951
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1839 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1898
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1899 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1955
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1956 LTSPA-ISPDDSDEEN 1970
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1571 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1630
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1691 SYSPTSP-SYSP 1701
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1558 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1618 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1678 YSPTSPSYSPTSP-SYSP 1694
Score = 97.4 bits (241), Expect = 7e-19
Identities = 66/154 (42%), Positives = 84/154 (54%), Gaps = 38/154 (24%)
Frame = -3
Query: 578 SPGYSP----TSPSYSPTSPSYG----PTSPSYNPQSAK--------YSPSIAYSP-SNA 450
SP +P +P+Y SPS G P + ++P +A YSP+ + +P S
Sbjct: 1514 SPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPG 1573
Query: 449 RLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSS 330
P+SPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+S
Sbjct: 1574 SPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTS 1633
Query: 329 PYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1634 PNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
[67][TOP]
>UniRef100_C8Z6G2 Rpo21p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8Z6G2_YEAST
Length = 1733
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1630 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1688
Query: 239 YTP 231
Y+P
Sbjct: 1689 YSP 1691
Score = 171 bits (433), Expect = 4e-41
Identities = 86/120 (71%), Positives = 94/120 (78%), Gaps = 3/120 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1664
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S GYSP P YSP Q
Sbjct: 1665 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQ 1724
Score = 170 bits (430), Expect = 9e-41
Identities = 86/123 (69%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
+SPTSP YSPTSP+YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1602 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA- 1660
Query: 239 YTP 231
Y+P
Sbjct: 1661 YSP 1663
Score = 164 bits (414), Expect = 6e-39
Identities = 82/123 (66%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
+ +SPG+SPTSP+YSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1595 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1653
Query: 239 YTP 231
Y+P
Sbjct: 1654 YSP 1656
Score = 150 bits (380), Expect = 6e-35
Identities = 76/120 (63%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
+PTSPG+ +SP +SPTSP+Y PTSP+Y+P S YSP+ SPS + SP+ YSPTSP+
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPT---SPSYSPTSPS--YSPTSPS 1583
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1584 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1642
[68][TOP]
>UniRef100_C7GKZ2 Rpo21p n=2 Tax=Saccharomyces cerevisiae RepID=C7GKZ2_YEAS2
Length = 1733
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1630 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1688
Query: 239 YTP 231
Y+P
Sbjct: 1689 YSP 1691
Score = 171 bits (433), Expect = 4e-41
Identities = 86/120 (71%), Positives = 94/120 (78%), Gaps = 3/120 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1664
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S GYSP P YSP Q
Sbjct: 1665 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQ 1724
Score = 170 bits (430), Expect = 9e-41
Identities = 86/123 (69%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
+SPTSP YSPTSP+YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1602 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA- 1660
Query: 239 YTP 231
Y+P
Sbjct: 1661 YSP 1663
Score = 164 bits (414), Expect = 6e-39
Identities = 82/123 (66%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
+ +SPG+SPTSP+YSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1595 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1653
Query: 239 YTP 231
Y+P
Sbjct: 1654 YSP 1656
Score = 150 bits (380), Expect = 6e-35
Identities = 76/120 (63%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
+PTSPG+ +SP +SPTSP+Y PTSP+Y+P S YSP+ SPS + SP+ YSPTSP+
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPT---SPSYSPTSPS--YSPTSPS 1583
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1584 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1642
[69][TOP]
>UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JYP8_SCHJY
Length = 1748
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1569 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1628
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1629 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1687
Query: 239 YTP 231
Y+P
Sbjct: 1688 YSP 1690
Score = 172 bits (437), Expect = 1e-41
Identities = 86/120 (71%), Positives = 95/120 (79%), Gaps = 3/120 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1590 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1649
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP + Q
Sbjct: 1650 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGHSAQ 1709
Score = 168 bits (426), Expect = 3e-40
Identities = 89/145 (61%), Positives = 101/145 (69%), Gaps = 23/145 (15%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1604 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1663
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP------------------- 294
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1664 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGHSAQNAQGRMSPRSPVYS 1723
Query: 293 --SAGYSPTLPGYSPSSTGQYTPHE 225
S YSPT P YSP+S +Y+P+E
Sbjct: 1724 PTSPSYSPTSPSYSPTSP-RYSPNE 1747
Score = 167 bits (424), Expect = 4e-40
Identities = 84/123 (68%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
+SP+SP YSP+SP+YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1548 FSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1607
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1608 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1666
Query: 239 YTP 231
Y+P
Sbjct: 1667 YSP 1669
Score = 148 bits (373), Expect = 4e-34
Identities = 76/118 (64%), Positives = 89/118 (75%), Gaps = 1/118 (0%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYS 402
+SPG+SP+SPSYSP+SP+Y PTSPSY+P S YSP+ SPS YSPTSP+YS
Sbjct: 1544 SSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPT---SPS---------YSPTSPSYS 1591
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
PTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1592 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1648
Score = 130 bits (326), Expect = 1e-28
Identities = 71/117 (60%), Positives = 82/117 (70%), Gaps = 3/117 (2%)
Frame = -3
Query: 572 GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP-YSPTSPNYSP 399
G SP Y SP G +SP ++P S YSPS AYSP++ SP SP YSPTSP+YSP
Sbjct: 1528 GADARSPGYM--SPFSGASSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSP 1585
Query: 398 TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
TSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1586 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1641
[70][TOP]
>UniRef100_B3LH31 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae RM11-1a
RepID=B3LH31_YEAS1
Length = 1733
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1630 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1688
Query: 239 YTP 231
Y+P
Sbjct: 1689 YSP 1691
Score = 171 bits (433), Expect = 4e-41
Identities = 86/120 (71%), Positives = 94/120 (78%), Gaps = 3/120 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1664
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S GYSP P YSP Q
Sbjct: 1665 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQ 1724
Score = 170 bits (430), Expect = 9e-41
Identities = 86/123 (69%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
+SPTSP YSPTSP+YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1602 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA- 1660
Query: 239 YTP 231
Y+P
Sbjct: 1661 YSP 1663
Score = 164 bits (414), Expect = 6e-39
Identities = 82/123 (66%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
+ +SPG+SPTSP+YSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1595 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1653
Query: 239 YTP 231
Y+P
Sbjct: 1654 YSP 1656
Score = 150 bits (379), Expect = 7e-35
Identities = 76/119 (63%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNY 405
PTSPG+ +SP +SPTSP+Y PTSP+Y+P S YSP+ SPS + SP+ YSPTSP+Y
Sbjct: 1530 PTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPT---SPSYSPTSPS--YSPTSPSY 1584
Query: 404 SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1585 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1642
[71][TOP]
>UniRef100_P04050 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Saccharomyces
cerevisiae RepID=RPB1_YEAST
Length = 1733
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1570 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1629
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1630 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1688
Query: 239 YTP 231
Y+P
Sbjct: 1689 YSP 1691
Score = 171 bits (433), Expect = 4e-41
Identities = 86/120 (71%), Positives = 94/120 (78%), Gaps = 3/120 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPT 1664
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S GYSP P YSP Q
Sbjct: 1665 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQ 1724
Score = 170 bits (430), Expect = 9e-41
Identities = 86/123 (69%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
+SPTSP YSPTSP+YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1542 FSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1601
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1602 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA- 1660
Query: 239 YTP 231
Y+P
Sbjct: 1661 YSP 1663
Score = 164 bits (414), Expect = 6e-39
Identities = 82/123 (66%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
+ +SPG+SPTSP+YSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1535 FGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1594
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1595 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1653
Query: 239 YTP 231
Y+P
Sbjct: 1654 YSP 1656
Score = 150 bits (380), Expect = 6e-35
Identities = 76/120 (63%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
+PTSPG+ +SP +SPTSP+Y PTSP+Y+P S YSP+ SPS + SP+ YSPTSP+
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPT---SPSYSPTSPS--YSPTSPS 1583
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1584 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1642
[72][TOP]
>UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1
Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO
Length = 1752
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1679
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1680 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1738
Query: 239 YTP 231
Y+P
Sbjct: 1739 YSP 1741
Score = 170 bits (431), Expect = 7e-41
Identities = 87/123 (70%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+ S YSP S +YSP++ SP SP YSPT
Sbjct: 1578 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1637
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1638 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1696
Query: 239 YTP 231
Y+P
Sbjct: 1697 YSP 1699
Score = 170 bits (431), Expect = 7e-41
Identities = 87/123 (70%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YS TSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1599 YSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1658
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1659 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1717
Query: 239 YTP 231
Y+P
Sbjct: 1718 YSP 1720
Score = 164 bits (414), Expect = 6e-39
Identities = 82/111 (73%), Positives = 90/111 (81%), Gaps = 3/111 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1701 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1751
Score = 162 bits (411), Expect = 1e-38
Identities = 87/124 (70%), Positives = 95/124 (76%), Gaps = 10/124 (8%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1686
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS---SGASPDYSP-SAGYSPTLPGY 261
SP+YSPTSPSYSPTSPSYSP+SP+YSP SP S S SP YSP S YSPT P Y
Sbjct: 1687 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1746
Query: 260 SPSS 249
SP+S
Sbjct: 1747 SPTS 1750
Score = 159 bits (402), Expect = 2e-37
Identities = 83/123 (67%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP+SPGYS TSP+Y P+SPSY PTSPSY+P S YSP S +YSP++ S SP YSPT
Sbjct: 1558 YSPSSPGYS-TSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPT 1616
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1617 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1675
Query: 239 YTP 231
Y+P
Sbjct: 1676 YSP 1678
Score = 154 bits (390), Expect = 4e-36
Identities = 85/143 (59%), Positives = 96/143 (67%), Gaps = 23/143 (16%)
Frame = -3
Query: 590 YSPTSPGYSP-------------TSPSYSPTSPSYGPTSPSYNPQSAKYSP--------S 474
Y TSP YSP +SPSYSPTSPSY PTSPSY+P S YSP S
Sbjct: 1551 YGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATS 1610
Query: 473 IAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 297
+YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YS
Sbjct: 1611 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1670
Query: 296 P-SAGYSPTLPGYSPSSTGQYTP 231
P S YSPT P YSP+S Y+P
Sbjct: 1671 PTSPSYSPTSPSYSPTSP-SYSP 1692
Score = 138 bits (347), Expect = 4e-31
Identities = 77/126 (61%), Positives = 87/126 (69%), Gaps = 9/126 (7%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSPSYGP------TSPSYNPQSAKYSP-SIAYSPSNARLSPASP-Y 426
TSP S SP Y TSPSY P TSP+Y P S YSP S +YSP++ SP SP Y
Sbjct: 1540 TSPFSSAMSPGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSY 1599
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SPTSP+YS TSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1600 SPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1659
Query: 248 TGQYTP 231
Y+P
Sbjct: 1660 P-SYSP 1664
Score = 134 bits (338), Expect = 4e-30
Identities = 65/84 (77%), Positives = 72/84 (85%), Gaps = 2/84 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1728
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPT 345
SP+YSPTSPSYSPTSPSYSP+SP+
Sbjct: 1729 SPSYSPTSPSYSPTSPSYSPTSPS 1752
Score = 133 bits (335), Expect = 9e-30
Identities = 68/91 (74%), Positives = 74/91 (81%), Gaps = 5/91 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1721
Query: 416 SPNYSPTSPSYSPTSPSYSPSSP---TYSPS 333
SP+YSPTSPSYSPTSPSYSP+SP SPS
Sbjct: 1722 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1752
Score = 124 bits (312), Expect = 4e-27
Identities = 70/117 (59%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSP 399
SPGY TSP S SP YG TSPSY+P S YS S AY PS SP+YSP
Sbjct: 1536 SPGY--TSPFSSAMSPGYGLTSPSYSPSSPGYSTSPAYMPS-------------SPSYSP 1580
Query: 398 TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
TSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1581 TSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1636
[73][TOP]
>UniRef100_P08775 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Mus musculus
RepID=RPB1_MOUSE
Length = 1970
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1747
Query: 239 YTP 231
Y+P
Sbjct: 1748 YSP 1750
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1709
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP S Y+PT P YSP+S
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP-S 1768
Query: 239 YTP 231
Y+P
Sbjct: 1769 YSP 1771
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1675 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1733
Query: 239 YTP 231
Y+P
Sbjct: 1734 YSP 1736
Score = 171 bits (433), Expect = 4e-41
Identities = 85/123 (69%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y+P S Y+P S +YSP++ SP SP Y+PT
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PS+ YSP+ P YSP+S +
Sbjct: 1780 SPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSP-K 1838
Query: 239 YTP 231
YTP
Sbjct: 1839 YTP 1841
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1668 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1726
Query: 239 YTP 231
Y+P
Sbjct: 1727 YSP 1729
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1593 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1652
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1653 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1713 YSPTSP-SYSP 1722
Score = 164 bits (416), Expect = 4e-39
Identities = 83/129 (64%), Positives = 101/129 (78%), Gaps = 9/129 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+Y+PTSP+Y PTSPSY+P S YSP S +YSPS+ R +P SP Y+P+
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1821
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS--- 249
SP+YSP+SPSYSPTSP Y+P+SP+YSPSSP + ASP YSP S YSPT P YSP+S
Sbjct: 1822 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTY 1881
Query: 248 ---TGQYTP 231
T +Y+P
Sbjct: 1882 SPTTPKYSP 1890
Score = 160 bits (405), Expect = 7e-38
Identities = 80/127 (62%), Positives = 92/127 (72%), Gaps = 13/127 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSP+SP YSPTSP Y+PTSPSY P+SP Y P S KYSP S YSP++ + SP SP
Sbjct: 1825 YSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPT 1884
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTL 270
YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT
Sbjct: 1885 TPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTS 1944
Query: 269 PGYSPSS 249
PGYSP+S
Sbjct: 1945 PGYSPTS 1951
Score = 150 bits (379), Expect = 7e-35
Identities = 77/136 (56%), Positives = 93/136 (68%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+P SP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1839 YTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1898
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1899 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1955
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1956 LTSPA-ISPDDSDEEN 1970
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1571 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1630
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1691 SYSPTSP-SYSP 1701
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1558 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1618 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1678 YSPTSPSYSPTSP-SYSP 1694
Score = 97.4 bits (241), Expect = 7e-19
Identities = 66/154 (42%), Positives = 84/154 (54%), Gaps = 38/154 (24%)
Frame = -3
Query: 578 SPGYSP----TSPSYSPTSPSYG----PTSPSYNPQSAK--------YSPSIAYSP-SNA 450
SP +P +P+Y SPS G P + ++P +A YSP+ + +P S
Sbjct: 1514 SPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPG 1573
Query: 449 RLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSS 330
P+SPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+S
Sbjct: 1574 SPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTS 1633
Query: 329 PYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1634 PNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
[74][TOP]
>UniRef100_P24928 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Euarchontoglires
RepID=RPB1_HUMAN
Length = 1970
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1629 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1688
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 1747
Query: 239 YTP 231
Y+P
Sbjct: 1748 YSP 1750
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1709
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP S Y+PT P YSP+S
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP-S 1768
Query: 239 YTP 231
Y+P
Sbjct: 1769 YSP 1771
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1674
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1675 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1733
Query: 239 YTP 231
Y+P
Sbjct: 1734 YSP 1736
Score = 171 bits (433), Expect = 4e-41
Identities = 85/123 (69%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y+P S Y+P S +YSP++ SP SP Y+PT
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 1779
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PS+ YSP+ P YSP+S +
Sbjct: 1780 SPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSP-K 1838
Query: 239 YTP 231
YTP
Sbjct: 1839 YTP 1841
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1668 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1726
Query: 239 YTP 231
Y+P
Sbjct: 1727 YSP 1729
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1593 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1652
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1653 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1713 YSPTSP-SYSP 1722
Score = 162 bits (411), Expect = 1e-38
Identities = 83/130 (63%), Positives = 98/130 (75%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSP+Y+PTSP+Y PTSPSY+P S YSP S +YSPS+ R +P SP
Sbjct: 1762 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1821
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP S YSPT P Y
Sbjct: 1822 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTY 1881
Query: 260 SPSSTGQYTP 231
SP +T +Y+P
Sbjct: 1882 SP-TTPKYSP 1890
Score = 161 bits (407), Expect = 4e-38
Identities = 80/120 (66%), Positives = 92/120 (76%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPT
Sbjct: 1832 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1891
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1892 SPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1951
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1839 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1898
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1899 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1955
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1956 LTSPA-ISPDDSDEEN 1970
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1571 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1630
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1691 SYSPTSP-SYSP 1701
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1558 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1618 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1678 YSPTSPSYSPTSP-SYSP 1694
Score = 97.4 bits (241), Expect = 7e-19
Identities = 66/154 (42%), Positives = 84/154 (54%), Gaps = 38/154 (24%)
Frame = -3
Query: 578 SPGYSP----TSPSYSPTSPSYG----PTSPSYNPQSAK--------YSPSIAYSP-SNA 450
SP +P +P+Y SPS G P + ++P +A YSP+ + +P S
Sbjct: 1514 SPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPG 1573
Query: 449 RLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSS 330
P+SPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+S
Sbjct: 1574 SPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTS 1633
Query: 329 PYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1634 PNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
[75][TOP]
>UniRef100_P11414 DNA-directed RNA polymerase II subunit RPB1 (Fragment) n=1
Tax=Cricetulus griseus RepID=RPB1_CRIGR
Length = 467
Score = 173 bits (439), Expect = 8e-42
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 126 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 185
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 186 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-N 244
Query: 239 YTP 231
Y+P
Sbjct: 245 YSP 247
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 147 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 206
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP S Y+PT P YSP+S
Sbjct: 207 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP-S 265
Query: 239 YTP 231
Y+P
Sbjct: 266 YSP 268
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 112 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 171
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 172 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 230
Query: 239 YTP 231
Y+P
Sbjct: 231 YSP 233
Score = 171 bits (433), Expect = 4e-41
Identities = 85/123 (69%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y+P S Y+P S +YSP++ SP SP Y+PT
Sbjct: 217 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPT 276
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y+PS+ YSP+ P YSP+S +
Sbjct: 277 SPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSP-K 335
Query: 239 YTP 231
YTP
Sbjct: 336 YTP 338
Score = 169 bits (427), Expect = 2e-40
Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 105 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 164
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 165 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 223
Query: 239 YTP 231
Y+P
Sbjct: 224 YSP 226
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 90 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 149
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 150 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 209
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 210 YSPTSP-SYSP 219
Score = 162 bits (411), Expect = 1e-38
Identities = 83/130 (63%), Positives = 98/130 (75%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSP+Y+PTSP+Y PTSPSY+P S YSP S +YSPS+ R +P SP
Sbjct: 259 YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 318
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP S YSPT P Y
Sbjct: 319 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTY 378
Query: 260 SPSSTGQYTP 231
SP +T +Y+P
Sbjct: 379 SP-TTPKYSP 387
Score = 161 bits (407), Expect = 4e-38
Identities = 80/120 (66%), Positives = 92/120 (76%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPT
Sbjct: 329 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 388
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 389 SPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 448
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 336 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 395
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 396 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 452
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 453 LTSPA-ISPDDSDEEN 467
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 68 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 127
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 128 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 187
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 188 SYSPTSP-SYSP 198
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 55 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 114
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 115 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 174
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 175 YSPTSPSYSPTSP-SYSP 191
Score = 94.7 bits (234), Expect = 5e-18
Identities = 64/141 (45%), Positives = 81/141 (57%), Gaps = 22/141 (15%)
Frame = -3
Query: 587 SPTSPGYSPTSPS-YSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT-- 417
+P + G+SP++ S S SP Y SP+++P +P SP P+SPY P+
Sbjct: 37 TPGAAGFSPSAASDASGFSPGY---SPAWSP-----TPGSPGSPG-----PSSPYIPSPG 83
Query: 416 ---SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 294
SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 84 GAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPT 143
Query: 293 SAGYSPTLPGYSPSSTGQYTP 231
S YSPT P YSP+S Y+P
Sbjct: 144 SPSYSPTSPSYSPTSP-SYSP 163
[76][TOP]
>UniRef100_UPI00005A0B1F PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 10 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1F
Length = 1840
Score = 173 bits (438), Expect = 1e-41
Identities = 89/130 (68%), Positives = 100/130 (76%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1583 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1642
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP--------SAGYSPTLPGY 261
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+YSP S YSPT P Y
Sbjct: 1643 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1702
Query: 260 SPSSTGQYTP 231
SP+S +YTP
Sbjct: 1703 SPTSP-KYTP 1711
Score = 167 bits (422), Expect = 7e-40
Identities = 83/123 (67%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1618 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1677
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP YSPS+ Y+PT P YSP+S +
Sbjct: 1678 SPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSP-K 1736
Query: 239 YTP 231
Y+P
Sbjct: 1737 YSP 1739
Score = 162 bits (409), Expect = 2e-38
Identities = 81/127 (63%), Positives = 92/127 (72%), Gaps = 13/127 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSP Y+PTSPSY P+SP Y P S KYSP S YSP++ + SP SP
Sbjct: 1695 YSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPT 1754
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTL 270
YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT
Sbjct: 1755 TPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTS 1814
Query: 269 PGYSPSS 249
PGYSP+S
Sbjct: 1815 PGYSPTS 1821
Score = 155 bits (393), Expect = 2e-36
Identities = 83/127 (65%), Positives = 97/127 (76%), Gaps = 7/127 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSP+
Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPS 1684
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
PNY+PTSPSYSPTSPSYSP+SP Y+P SP +SP+Y+P S YSPT P YSP+
Sbjct: 1685 RPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSP----SSPEYTPTSPKYSPTSPKYSPT 1740
Query: 251 STGQYTP 231
S +Y+P
Sbjct: 1741 SP-KYSP 1746
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1709 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1768
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1769 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1825
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1826 LTSPA-ISPDDSDEEN 1840
Score = 151 bits (382), Expect = 3e-35
Identities = 82/129 (63%), Positives = 91/129 (70%), Gaps = 9/129 (6%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPA 435
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP+ SPS
Sbjct: 1526 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPT---SPS------- 1575
Query: 434 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYS 258
YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YS
Sbjct: 1576 --YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1633
Query: 257 PSSTGQYTP 231
P+S Y+P
Sbjct: 1634 PTSP-SYSP 1641
Score = 144 bits (363), Expect = 5e-33
Identities = 84/162 (51%), Positives = 94/162 (58%), Gaps = 46/162 (28%)
Frame = -3
Query: 578 SPGYSPT-------------------------------------------SPSYSPTSPS 528
SPGYSP SPSYSPTSPS
Sbjct: 1495 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGELYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1554
Query: 527 YGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPS 354
Y PTSPSY+P S YSP S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+
Sbjct: 1555 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1614
Query: 353 SPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1615 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1655
Score = 128 bits (322), Expect = 3e-28
Identities = 76/126 (60%), Positives = 85/126 (67%), Gaps = 7/126 (5%)
Frame = -3
Query: 587 SPTSPG-YSPTSPS----YSPTSPSYGPTSPS-YNPQSAKYSPSIAYSPSNARLSPASPY 426
SP SPG SP PS YSPTSP+Y P SP Y PQS YSP+ SPS Y
Sbjct: 1508 SPGSPGPSSPYIPSPGELYSPTSPAYEPRSPGGYTPQSPSYSPT---SPS---------Y 1555
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1556 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1615
Query: 248 TGQYTP 231
Y+P
Sbjct: 1616 P-SYSP 1620
[77][TOP]
>UniRef100_A7S8F9 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7S8F9_NEMVE
Length = 1929
Score = 173 bits (438), Expect = 1e-41
Identities = 86/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPS+ YSP+ P YSP S
Sbjct: 1724 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSY 1783
Query: 239 YTP 231
+P
Sbjct: 1784 ASP 1786
Score = 170 bits (431), Expect = 7e-41
Identities = 89/124 (71%), Positives = 99/124 (79%), Gaps = 4/124 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAY-SPSNARLSPASP-YSP 420
YSPTSP YSPTSPSYSPTSPSY P+SPSY+P S YSP S +Y SPS+ + SPASP YSP
Sbjct: 1741 YSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASPSSPKYSPASPSYSP 1800
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
TSP YSPTSP+YSP SPSYSPSSP YSP+SP + ASP YSP S YSP+ P YSPSS
Sbjct: 1801 TSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSP- 1859
Query: 242 QYTP 231
+YTP
Sbjct: 1860 RYTP 1863
Score = 169 bits (429), Expect = 1e-40
Identities = 91/138 (65%), Positives = 101/138 (73%), Gaps = 18/138 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSP--------YSSGASPDYSP--------SAG 285
SP+YSPTSPSYSPTSPSYSPSSP+YSPSSP Y+S +SP YSP S
Sbjct: 1745 SPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASPSSPKYSPASPSYSPTSPK 1804
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1805 YSPTSPNYSPASP-SYSP 1821
Score = 166 bits (420), Expect = 1e-39
Identities = 86/131 (65%), Positives = 95/131 (72%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP----- 429
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSPS +YSPS+ SP SP
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASP 1786
Query: 428 ----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
YSP SP+YSPTSP YSPTSP+YSP+SP+YSPSSP S SP Y+P S YSP P
Sbjct: 1787 SSPKYSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPS 1846
Query: 263 YSPSSTGQYTP 231
YSPSS Y+P
Sbjct: 1847 YSPSSP-SYSP 1856
Score = 162 bits (411), Expect = 1e-38
Identities = 85/124 (68%), Positives = 97/124 (78%), Gaps = 4/124 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSPS+ SP+SP YSP
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQ 1779
Query: 416 SPNY-SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTG 243
SP+Y SP+SP YSP SPSYSP+SP YSP+SP S ASP YSPS+ YSPT P Y+P+S
Sbjct: 1780 SPSYASPSSPKYSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASP- 1838
Query: 242 QYTP 231
Y+P
Sbjct: 1839 SYSP 1842
Score = 159 bits (403), Expect = 1e-37
Identities = 88/148 (59%), Positives = 98/148 (66%), Gaps = 25/148 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSA--------KYSP--------SIAYSP 459
YSPTSP YSPTSPSYSP+SPSY P+SPSY+PQS KYSP S YSP
Sbjct: 1748 YSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASPSSPKYSPASPSYSPTSPKYSP 1807
Query: 458 SNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
++ SPASP YSPTSP+Y+P SPSYSP SPSYSPSSP+YSPSSP + SP
Sbjct: 1808 TSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQ 1867
Query: 302 YSP-SAGYSPTLPGYSPSSTGQYTPHEG 222
YSP S YSP P YSP +T YTP G
Sbjct: 1868 YSPTSPKYSPASPNYSP-TTPSYTPMSG 1894
Score = 155 bits (393), Expect = 2e-36
Identities = 81/125 (64%), Positives = 94/125 (75%), Gaps = 5/125 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAK--YSP-SIAYSPSNARLSPASP-YS 423
YSP+SP + P+SPS SP SPSY PTSP Y+P S YSP S +YSP++ SP SP YS
Sbjct: 1592 YSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYS 1651
Query: 422 PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSST 246
PTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 245 GQYTP 231
Y+P
Sbjct: 1712 -SYSP 1715
Score = 145 bits (365), Expect = 3e-33
Identities = 67/105 (63%), Positives = 83/105 (79%), Gaps = 2/105 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP SP YSPTSP YSPTSP+Y P SPSY+P S KYSP S +Y+P++ SPASP YSP+
Sbjct: 1791 YSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPS 1850
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGY 282
SP+YSP+SP Y+PTSP YSP+SP YSP+SP S +P Y+P +G+
Sbjct: 1851 SPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSPTTPSYTPMSGH 1895
Score = 144 bits (362), Expect = 7e-33
Identities = 73/117 (62%), Positives = 85/117 (72%), Gaps = 1/117 (0%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSP 399
SPGYSP+SP++ P+SPS P SPSY+P S YSPS SP+S YSP SP+YSP
Sbjct: 1589 SPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPS----------SPSSGYSPASPSYSP 1638
Query: 398 TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
TSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1639 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1694
Score = 142 bits (357), Expect = 3e-32
Identities = 77/124 (62%), Positives = 91/124 (73%), Gaps = 5/124 (4%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPS--NARLSPASP-YSP 420
SP P + SP YSP+SP++ P+SPS +P S YSP S YSPS ++ SPASP YSP
Sbjct: 1579 SPYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSP 1638
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1639 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP- 1697
Query: 242 QYTP 231
Y+P
Sbjct: 1698 SYSP 1701
Score = 114 bits (285), Expect = 6e-24
Identities = 69/119 (57%), Positives = 81/119 (68%), Gaps = 5/119 (4%)
Frame = -3
Query: 572 GYSPTSPSYSPTSP-SYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPNYSP 399
G+SP+ S +P SP S GPTSP Y P A SP YSPS+ P+SP SP SP+YSP
Sbjct: 1559 GFSPSWMSPTPGSPVSPGPTSP-YIPSPAAASPG--YSPSSPAFMPSSPSMSPASPSYSP 1615
Query: 398 TSPSYSPTSPS--YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
TSP YSP+SPS YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1616 TSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1673
Score = 106 bits (265), Expect = 1e-21
Identities = 51/80 (63%), Positives = 60/80 (75%), Gaps = 2/80 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
YSP+SP YSPTSPSY+P SPSY P SPSY+P S YSPS Y+P++ + SP SP YSP
Sbjct: 1819 YSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPA 1878
Query: 416 SPNYSPTSPSYSPTSPSYSP 357
SPNYSPT+PSY+P S P
Sbjct: 1879 SPNYSPTTPSYTPMSGHIVP 1898
Score = 82.8 bits (203), Expect = 2e-14
Identities = 58/140 (41%), Positives = 79/140 (56%), Gaps = 21/140 (15%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPT-----SPSYG----PTSPSYNPQSAKYSPSIA---YSPSNARL 444
S SP +P + +P SP G P + S++P +A + ++ +SPS
Sbjct: 1508 SAMSPQMTPWNMGATPAYMEAWSPGMGSGMTPGAASFSPSAASDASGMSPGGFSPSWMSP 1567
Query: 443 SPASPYSP--TSPNYSPT----SPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY---SPS 291
+P SP SP TSP Y P+ SP YSP+SP++ PSSP+ SP+SP S SP Y SPS
Sbjct: 1568 TPGSPVSPGPTSP-YIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPS 1626
Query: 290 AGYSPTLPGYSPSSTGQYTP 231
+GYSP P YSP+S Y+P
Sbjct: 1627 SGYSPASPSYSPTSP-SYSP 1645
Score = 61.2 bits (147), Expect = 6e-08
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSP-----ASPY 426
Y+PTSP YSPTSP YSP SP+Y PT+PSY P S P + +S L P P+
Sbjct: 1861 YTPTSPQYSPTSPKYSPASPNYSPTTPSYTPMSGHIVP-LLHSIVQLLLDPPHLLNTRPH 1919
Query: 425 SPTS 414
PT+
Sbjct: 1920 HPTT 1923
[78][TOP]
>UniRef100_UPI000051AA8E PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) n=1 Tax=Apis mellifera
RepID=UPI000051AA8E
Length = 452
Score = 172 bits (437), Expect = 1e-41
Identities = 88/123 (71%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 195 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 254
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSPSSP + ASP YSP S YSP+ P YSP+S
Sbjct: 255 SPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPASP-S 313
Query: 239 YTP 231
Y+P
Sbjct: 314 YSP 316
Score = 172 bits (436), Expect = 2e-41
Identities = 88/129 (68%), Positives = 101/129 (78%), Gaps = 9/129 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 216 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 275
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSS--- 249
SP+YSP+SP+Y+P SPSYSP+SP+YSPSSP S ASP YSPS+ YSPT P YSP+S
Sbjct: 276 SPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSF 335
Query: 248 ---TGQYTP 231
+ QYTP
Sbjct: 336 AGTSPQYTP 344
Score = 165 bits (417), Expect = 3e-39
Identities = 84/130 (64%), Positives = 97/130 (74%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSPS+ +PASP
Sbjct: 237 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPT 296
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
YSP+SP YSP SPSYSP+SP YSP+SP+YSP+SP +G SP Y+P S YSPT P Y
Sbjct: 297 SPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPASPTYSPTSPTY 356
Query: 260 SPSSTGQYTP 231
SP+S Y+P
Sbjct: 357 SPTSP-SYSP 365
Score = 160 bits (404), Expect = 9e-38
Identities = 89/152 (58%), Positives = 101/152 (66%), Gaps = 32/152 (21%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY P+SP+Y P S YSP S +YSPS+ + SPASP YSP+
Sbjct: 258 YSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPASPSYSPS 317
Query: 416 SPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYSSGASPDYSPSAG--------- 285
SP YSPTSPSYSPTSPS Y+P+SPTYSP+SP S SP YSPS+
Sbjct: 318 SPKYSPTSPSYSPTSPSFAGTSPQYTPASPTYSPTSPTYSPTSPSYSPSSPQHTASGSTR 377
Query: 284 --------------YSPTLPGYSPSSTGQYTP 231
YSPT P YSPSST +Y+P
Sbjct: 378 YSPSSPNYSPTSPTYSPTSPQYSPSST-KYSP 408
Score = 155 bits (392), Expect = 2e-36
Identities = 79/121 (65%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSP Y PTSPS +P+SP+Y PTSP+Y+P S YSP+ SPS + SP+ YSPTSP
Sbjct: 132 YSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSPT---SPSYSPTSPS--YSPTSP 186
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYT 234
+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+
Sbjct: 187 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYS 245
Query: 233 P 231
P
Sbjct: 246 P 246
Score = 154 bits (390), Expect = 4e-36
Identities = 81/131 (61%), Positives = 93/131 (70%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSP+SP YSPTSPSYSPTSPS+ TSP Y P S YSP S YSP++ SP+SP
Sbjct: 314 YSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPASPTYSPTSPTYSPTSPSYSPSSPQHTAS 373
Query: 428 ----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
YSP+SPNYSPTSP+YSPTSP YSPSS YSP+SP + SP YSP S YSP +PG
Sbjct: 374 GSTRYSPSSPNYSPTSPTYSPTSPQYSPSSTKYSPTSPTYTPTSPSYSPTSPTYSPPVPG 433
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 434 YSPTSP-TYSP 443
Score = 149 bits (375), Expect = 2e-34
Identities = 83/162 (51%), Positives = 96/162 (59%), Gaps = 39/162 (24%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSP+SP+Y+P SPSY PTSPSY+P S +YSP S +YSPS+ + SP SP
Sbjct: 272 YSPTSPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPT 331
Query: 428 -----------------YSPTSPNYSPTSPSYSPTSPS--------YSPSSPTYSPSSPY 324
YSPTSP YSPTSPSYSP+SP YSPSSP YSP+SP
Sbjct: 332 SPSFAGTSPQYTPASPTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPT 391
Query: 323 SSGASPDYSPSAG--------YSPTLPGYSPSSTGQYTPHEG 222
S SP YSPS+ Y+PT P YSP+S P G
Sbjct: 392 YSPTSPQYSPSSTKYSPTSPTYTPTSPSYSPTSPTYSPPVPG 433
Score = 135 bits (339), Expect = 3e-30
Identities = 77/130 (59%), Positives = 86/130 (66%), Gaps = 11/130 (8%)
Frame = -3
Query: 587 SPTSPGYSPT----------SPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSP 438
SP SPG S + SPSYSPTSP+Y PTSPS P S YSP+ SP+
Sbjct: 109 SPGSPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSPSITPSSPNYSPT---SPT------ 159
Query: 437 ASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P Y
Sbjct: 160 ---YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 216
Query: 260 SPSSTGQYTP 231
SP+S Y+P
Sbjct: 217 SPTSP-SYSP 225
Score = 133 bits (335), Expect = 9e-30
Identities = 76/143 (53%), Positives = 85/143 (59%), Gaps = 24/143 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS-------YSPTSPSYGPTSPSYNPQSAKYSPS---------IAYSP 459
YSPTSP YSPTSPS Y+P SP+Y PTSP+Y+P S YSPS YSP
Sbjct: 321 YSPTSPSYSPTSPSFAGTSPQYTPASPTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSP 380
Query: 458 SNARLSPASP-YSPTSPNYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
S+ SP SP YSPTSP YSP TSP+Y+PTSPSYSP+SPTYSP
Sbjct: 381 SSPNYSPTSPTYSPTSPQYSPSSTKYSPTSPTYTPTSPSYSPTSPTYSP----------- 429
Query: 302 YSPSAGYSPTLPGYSPSSTGQYT 234
P GYSPT P YSP+S T
Sbjct: 430 --PVPGYSPTSPTYSPASPAYET 450
Score = 69.7 bits (169), Expect = 2e-10
Identities = 53/134 (39%), Positives = 66/134 (49%), Gaps = 15/134 (11%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPS------YNPQSAKYSPSIAYSPSNARLSPA-SP 429
S +P SP + +P YG +S S P A +SPS A S LSPA S
Sbjct: 45 SVATPSMSPQMTPWMGATPGYGASSMSPALGSGMTPGGACFSPSGASDASG--LSPAYSA 102
Query: 428 YSPTSPNYSPTSPSYSP--------TSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPT 273
YSP + PS SP SPSYSP+SP Y P+SP + +SP+YSP T
Sbjct: 103 YSPQPGSPGSPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSPSITPSSPNYSP------T 156
Query: 272 LPGYSPSSTGQYTP 231
P YSP+S Y+P
Sbjct: 157 SPTYSPTSP-NYSP 169
[79][TOP]
>UniRef100_A7NVN7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7NVN7_VITVI
Length = 1010
Score = 172 bits (437), Expect = 1e-41
Identities = 87/123 (70%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSPGYSPTSP YSPTSP Y PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 794 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPT 853
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 854 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSP-S 912
Query: 239 YTP 231
Y+P
Sbjct: 913 YSP 915
Score = 166 bits (421), Expect = 1e-39
Identities = 85/123 (69%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP+SPGYSP+SP YSPTSP Y PTSP Y+P S YSP S YSPS+ SP SP YSPT
Sbjct: 780 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 839
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 840 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPA- 898
Query: 239 YTP 231
Y+P
Sbjct: 899 YSP 901
Score = 166 bits (419), Expect = 2e-39
Identities = 84/123 (68%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSP+SP YSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 815 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 874
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 875 SPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 933
Query: 239 YTP 231
Y+P
Sbjct: 934 YSP 936
Score = 164 bits (415), Expect = 5e-39
Identities = 82/122 (67%), Positives = 95/122 (77%), Gaps = 2/122 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 885 YSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 944
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SP YSPTSP YSPTSPSYSP+SP+YSP+SP + +S YSPS YSP+ P SPSS Y
Sbjct: 945 SPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSLAYSPSSPRLSPSS--PY 1002
Query: 236 TP 231
+P
Sbjct: 1003 SP 1004
Score = 159 bits (403), Expect = 1e-37
Identities = 81/112 (72%), Positives = 89/112 (79%), Gaps = 2/112 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 899 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPT 958
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGY 261
SP+YSPTSPSYSPTSPSY+PSS YSPS YS +SP SPS+ YSPT P Y
Sbjct: 959 SPSYSPTSPSYSPTSPSYNPSSAKYSPSLAYSP-SSPRLSPSSPYSPTSPNY 1009
Score = 159 bits (401), Expect = 2e-37
Identities = 83/124 (66%), Positives = 95/124 (76%), Gaps = 4/124 (3%)
Frame = -3
Query: 590 YSPTS-PGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSP 420
+SPTS PGYSP+SP YSP+SP Y PTSP Y+P S YSP S YSP++ SP+SP YSP
Sbjct: 772 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 831
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
TSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 832 TSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSP- 890
Query: 242 QYTP 231
Y+P
Sbjct: 891 SYSP 894
Score = 104 bits (259), Expect = 6e-21
Identities = 57/98 (58%), Positives = 69/98 (70%), Gaps = 3/98 (3%)
Frame = -3
Query: 515 SPSYNPQSAKYSPSIAYSP-SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTY 342
SP + Q + Y +A+SP S+ SP+SP YSP+SP YSPTSP YSPTSP YSP+SP Y
Sbjct: 756 SPITDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGY 815
Query: 341 SPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP+SP S +SP YSP S YSPT P YSP+S Y+P
Sbjct: 816 SPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP-SYSP 852
Score = 61.6 bits (148), Expect = 4e-08
Identities = 48/106 (45%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Frame = -3
Query: 536 SPSYGP-TSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPT--SPSYSPTS-P 369
+PS P T Y+ SP+ SP N RLSP T +SP ++SPTS P
Sbjct: 727 TPSRSPITGTPYH--DGMMSPNYLLSP-NLRLSPI-----TDAQFSPYVGGMAFSPTSSP 778
Query: 368 SYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 231
YSPSSP YSPSSP GYSPT PGYSP+S G Y+P
Sbjct: 779 GYSPSSPGYSPSSP-------------GYSPTSPGYSPTSPG-YSP 810
[80][TOP]
>UniRef100_B3RM26 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3RM26_TRIAD
Length = 1784
Score = 172 bits (437), Expect = 1e-41
Identities = 88/123 (71%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP Y PTSPSY+P S YSP S YSP++ R SP SP YSPT
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPSYSPT 1693
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S +
Sbjct: 1694 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSP-R 1752
Query: 239 YTP 231
Y+P
Sbjct: 1753 YSP 1755
Score = 171 bits (434), Expect = 3e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSPSY PTSPSY+P S +YSP S +YSP++ SP SP YSPT
Sbjct: 1620 YSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPT 1679
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S +
Sbjct: 1680 SPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSP-R 1738
Query: 239 YTP 231
Y+P
Sbjct: 1739 YSP 1741
Score = 168 bits (425), Expect = 3e-40
Identities = 85/124 (68%), Positives = 95/124 (76%), Gaps = 3/124 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSP Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1662 YSPTSPSYSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1721
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1722 SPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSP-D 1780
Query: 239 YTPH 228
Y+P+
Sbjct: 1781 YSPN 1784
Score = 143 bits (360), Expect = 1e-32
Identities = 76/114 (66%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
Frame = -3
Query: 569 YSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSP 390
YSPTSPSYSPTSP Y PTSPSY+P S +YSP+ SPS YSPTSP YSPTSP
Sbjct: 1592 YSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPT---SPS---------YSPTSPRYSPTSP 1639
Query: 389 SYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SYSPTSPSYSP+SP YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1640 SYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSP-SYSP 1692
Score = 108 bits (271), Expect = 2e-22
Identities = 67/127 (52%), Positives = 82/127 (64%), Gaps = 7/127 (5%)
Frame = -3
Query: 590 YSPTS--PGYSPTSPSYSPTSPSYGPTSP-SYNPQSAKYS---PSIAYSPSNARLSPASP 429
+SP S P +SP P+ SP SP GP+SP +P + SI + + L+ S
Sbjct: 1535 FSPASYSPNWSP-GPAASPGSP--GPSSPYMQSPTDITFYVAFQSIILTVESKLLTDFSK 1591
Query: 428 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
YSPTSP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP S YSPT P YSP+
Sbjct: 1592 YSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPT 1651
Query: 251 STGQYTP 231
S +Y+P
Sbjct: 1652 SP-RYSP 1657
Score = 106 bits (264), Expect = 2e-21
Identities = 69/167 (41%), Positives = 86/167 (51%), Gaps = 53/167 (31%)
Frame = -3
Query: 572 GYSPTSPSYSPTSPSYGPTSPSYNPQS--------------------------------- 492
G +P + +SP+ G + PS++P S
Sbjct: 1517 GMTPGAAGFSPS----GASEPSFSPASYSPNWSPGPAASPGSPGPSSPYMQSPTDITFYV 1572
Query: 491 -----------------AKYSP-SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSP 369
+KYSP S +YSP++ R SP SP YSPTSP YSPTSPSYSPTSP
Sbjct: 1573 AFQSIILTVESKLLTDFSKYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSP 1632
Query: 368 SYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S +Y+P
Sbjct: 1633 RYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSP-KYSP 1678
[81][TOP]
>UniRef100_UPI00019270E9 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 2 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270E9
Length = 2014
Score = 172 bits (436), Expect = 2e-41
Identities = 89/123 (72%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPT 1730
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SP YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSPS+ YSPT P YSP+S +
Sbjct: 1731 SPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSP-K 1789
Query: 239 YTP 231
Y+P
Sbjct: 1790 YSP 1792
Score = 171 bits (432), Expect = 5e-41
Identities = 87/123 (70%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1608 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1668 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSP-S 1726
Query: 239 YTP 231
Y+P
Sbjct: 1727 YSP 1729
Score = 170 bits (431), Expect = 7e-41
Identities = 89/130 (68%), Positives = 96/130 (73%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP--------SIAYSPSNARLSPA 435
YSPTSP YSPTSP YSPTSPSY PTSPSY+P S +YSP S +YSPS+ SP
Sbjct: 1720 YSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPT 1779
Query: 434 SP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
SP YSPTSP YSPTSP YSPTSPSYSPSSP+YSPSSP S SP YSP S YSPT P Y
Sbjct: 1780 SPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAY 1839
Query: 260 SPSSTGQYTP 231
SP+S Y+P
Sbjct: 1840 SPTSPA-YSP 1848
Score = 166 bits (420), Expect = 1e-39
Identities = 83/116 (71%), Positives = 93/116 (80%), Gaps = 3/116 (2%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 414
SP+SPGYSPTSP YSPTSP Y PTSPSY+P S YSP S +YSP++ SP SP YSPTS
Sbjct: 1588 SPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTS 1647
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
P+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1648 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Score = 166 bits (420), Expect = 1e-39
Identities = 85/130 (65%), Positives = 96/130 (73%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSP Y PTSPSY+P S YSPS YSP++ SP SP YSPT
Sbjct: 1776 YSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPT 1835
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAG--------YSPTLPGY 261
SP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP++ YSPT P Y
Sbjct: 1836 SPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPTSPKYSPTSPIYSPTSPAY 1895
Query: 260 SPSSTGQYTP 231
SP+STG Y+P
Sbjct: 1896 SPTSTG-YSP 1904
Score = 166 bits (419), Expect = 2e-39
Identities = 84/123 (68%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSP SPSYSP+SPSY PTSP Y+P S KYSP S YSP++ SP+SP YSP+
Sbjct: 1755 YSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPS 1814
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SPNYSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P YSP+S +
Sbjct: 1815 SPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSP-K 1873
Query: 239 YTP 231
Y+P
Sbjct: 1874 YSP 1876
Score = 161 bits (407), Expect = 4e-38
Identities = 82/123 (66%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP+SP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 1811 YSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPT 1870
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SP YSPTSP YSPTSP YSP+SP YSP+S S SP+YSPS+ YSPT P YSP+S +
Sbjct: 1871 SPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSP-K 1929
Query: 239 YTP 231
Y+P
Sbjct: 1930 YSP 1932
Score = 156 bits (394), Expect = 1e-36
Identities = 86/149 (57%), Positives = 98/149 (65%), Gaps = 11/149 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP--------SIAYSPSNARLSPA 435
YSPTSP YSPTSP YSPTSP+Y PTSP Y+P S KYSP S AYSP++ SP
Sbjct: 1846 YSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPT 1905
Query: 434 SP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS-SGASPDYSP-SAGYSPTLPG 264
SP YSP+SP YSPT+P YSPTSP YSP+SPTYSPS+P S S +YSP YSP P
Sbjct: 1906 SPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPDYSPGTPT 1965
Query: 263 YSPSSTGQYTPHEGDKKDKTGKKDASKDD 177
YSP T Y+P +G T K+ S D
Sbjct: 1966 YSPDGTPTYSP-DGRGFSGTAAKNISPMD 1993
Score = 153 bits (386), Expect = 1e-35
Identities = 79/127 (62%), Positives = 90/127 (70%), Gaps = 3/127 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSP Y+P S YSP S YSP++ + SP SP YSPT
Sbjct: 1832 YSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPTSPKYSPTSPIYSPT 1891
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTS YSPTSP YSPSSP YSP++P S SP YSP S YSP+ P +
Sbjct: 1892 SPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSIN 1951
Query: 239 YTPHEGD 219
Y+P E D
Sbjct: 1952 YSPLEPD 1958
Score = 148 bits (374), Expect = 3e-34
Identities = 78/122 (63%), Positives = 90/122 (73%), Gaps = 2/122 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTS 414
YSP SP ++P SP+ SP+SP Y PTSP Y+P S YSP+ SPS SP SP YSPTS
Sbjct: 1573 YSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPT---SPS---YSPTSPGYSPTS 1626
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQY 237
P+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y
Sbjct: 1627 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SY 1685
Query: 236 TP 231
+P
Sbjct: 1686 SP 1687
Score = 119 bits (298), Expect = 2e-25
Identities = 68/127 (53%), Positives = 85/127 (66%), Gaps = 8/127 (6%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPT---SPSYNPQSA--KYSP-SIAYSPSNARLSPASP- 429
S +PG + SPS + + P SP+++PQ + YSP S A++P + +SP+SP
Sbjct: 1534 SGMTPGAASFSPSAHSDASGFSPAGGFSPAWSPQDSIPSYSPNSPAFNPQSPAMSPSSPG 1593
Query: 428 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP S SP YSP S YSPT P YSP+
Sbjct: 1594 YSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1653
Query: 251 STGQYTP 231
S Y+P
Sbjct: 1654 SP-SYSP 1659
Score = 101 bits (252), Expect = 4e-20
Identities = 57/115 (49%), Positives = 68/115 (59%), Gaps = 7/115 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSP YSP+SP YSPT+P Y PTSP Y+P S YSPS +P++ S S
Sbjct: 1902 YSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPS---TPTDK--------SVGSI 1950
Query: 410 NYSPTSPSYSPTSPSYSP-SSPTYSPSSPYSSGASP------DYSPSAGYSPTLP 267
NYSP P YSP +P+YSP +PTYSP SG + DYSPS+ P P
Sbjct: 1951 NYSPLEPDYSPGTPTYSPDGTPTYSPDGRGFSGTAAKNISPMDYSPSSPSGPGTP 2005
Score = 98.2 bits (243), Expect = 4e-19
Identities = 55/119 (46%), Positives = 74/119 (62%), Gaps = 3/119 (2%)
Frame = -3
Query: 578 SPGYSPT-SPSY-SPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNY 405
+PGY SP+ S +P SPS + ++ +SP+ +SP+ + YSP SP +
Sbjct: 1521 TPGYGDGWSPALGSGMTPGAASFSPSAHSDASGFSPAGGFSPAWSPQDSIPSYSPNSPAF 1580
Query: 404 SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
+P SP+ SP+SP YSP+SP YSP+SP S SP YSP S GYSPT P YSP+S Y+P
Sbjct: 1581 NPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSP-SYSP 1638
[82][TOP]
>UniRef100_UPI00019270BB PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 1 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270BB
Length = 2041
Score = 172 bits (436), Expect = 2e-41
Identities = 89/123 (72%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPT 1757
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SP YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSPS+ YSPT P YSP+S +
Sbjct: 1758 SPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSP-K 1816
Query: 239 YTP 231
Y+P
Sbjct: 1817 YSP 1819
Score = 171 bits (432), Expect = 5e-41
Identities = 87/123 (70%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1635 YSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1695 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSP-S 1753
Query: 239 YTP 231
Y+P
Sbjct: 1754 YSP 1756
Score = 170 bits (431), Expect = 7e-41
Identities = 89/130 (68%), Positives = 96/130 (73%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP--------SIAYSPSNARLSPA 435
YSPTSP YSPTSP YSPTSPSY PTSPSY+P S +YSP S +YSPS+ SP
Sbjct: 1747 YSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPT 1806
Query: 434 SP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
SP YSPTSP YSPTSP YSPTSPSYSPSSP+YSPSSP S SP YSP S YSPT P Y
Sbjct: 1807 SPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAY 1866
Query: 260 SPSSTGQYTP 231
SP+S Y+P
Sbjct: 1867 SPTSPA-YSP 1875
Score = 166 bits (420), Expect = 1e-39
Identities = 83/116 (71%), Positives = 93/116 (80%), Gaps = 3/116 (2%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 414
SP+SPGYSPTSP YSPTSP Y PTSPSY+P S YSP S +YSP++ SP SP YSPTS
Sbjct: 1615 SPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTS 1674
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
P+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1675 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1730
Score = 166 bits (420), Expect = 1e-39
Identities = 85/130 (65%), Positives = 96/130 (73%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSP Y PTSPSY+P S YSPS YSP++ SP SP YSPT
Sbjct: 1803 YSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPT 1862
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAG--------YSPTLPGY 261
SP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP++ YSPT P Y
Sbjct: 1863 SPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPTSPKYSPTSPIYSPTSPAY 1922
Query: 260 SPSSTGQYTP 231
SP+STG Y+P
Sbjct: 1923 SPTSTG-YSP 1931
Score = 166 bits (419), Expect = 2e-39
Identities = 84/123 (68%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSP SPSYSP+SPSY PTSP Y+P S KYSP S YSP++ SP+SP YSP+
Sbjct: 1782 YSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPS 1841
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SPNYSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P YSP+S +
Sbjct: 1842 SPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSP-K 1900
Query: 239 YTP 231
Y+P
Sbjct: 1901 YSP 1903
Score = 161 bits (407), Expect = 4e-38
Identities = 82/123 (66%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP+SP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 1838 YSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPT 1897
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SP YSPTSP YSPTSP YSP+SP YSP+S S SP+YSPS+ YSPT P YSP+S +
Sbjct: 1898 SPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSP-K 1956
Query: 239 YTP 231
Y+P
Sbjct: 1957 YSP 1959
Score = 156 bits (394), Expect = 1e-36
Identities = 86/149 (57%), Positives = 98/149 (65%), Gaps = 11/149 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP--------SIAYSPSNARLSPA 435
YSPTSP YSPTSP YSPTSP+Y PTSP Y+P S KYSP S AYSP++ SP
Sbjct: 1873 YSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPT 1932
Query: 434 SP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS-SGASPDYSP-SAGYSPTLPG 264
SP YSP+SP YSPT+P YSPTSP YSP+SPTYSPS+P S S +YSP YSP P
Sbjct: 1933 SPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPDYSPGTPT 1992
Query: 263 YSPSSTGQYTPHEGDKKDKTGKKDASKDD 177
YSP T Y+P +G T K+ S D
Sbjct: 1993 YSPDGTPTYSP-DGRGFSGTAAKNISPMD 2020
Score = 153 bits (386), Expect = 1e-35
Identities = 79/127 (62%), Positives = 90/127 (70%), Gaps = 3/127 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSP Y+P S YSP S YSP++ + SP SP YSPT
Sbjct: 1859 YSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPTSPKYSPTSPIYSPT 1918
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTS YSPTSP YSPSSP YSP++P S SP YSP S YSP+ P +
Sbjct: 1919 SPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSIN 1978
Query: 239 YTPHEGD 219
Y+P E D
Sbjct: 1979 YSPLEPD 1985
Score = 148 bits (374), Expect = 3e-34
Identities = 78/122 (63%), Positives = 90/122 (73%), Gaps = 2/122 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTS 414
YSP SP ++P SP+ SP+SP Y PTSP Y+P S YSP+ SPS SP SP YSPTS
Sbjct: 1600 YSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPT---SPS---YSPTSPGYSPTS 1653
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQY 237
P+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y
Sbjct: 1654 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SY 1712
Query: 236 TP 231
+P
Sbjct: 1713 SP 1714
Score = 101 bits (252), Expect = 4e-20
Identities = 57/115 (49%), Positives = 68/115 (59%), Gaps = 7/115 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSP YSP+SP YSPT+P Y PTSP Y+P S YSPS +P++ S S
Sbjct: 1929 YSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPS---TPTDK--------SVGSI 1977
Query: 410 NYSPTSPSYSPTSPSYSP-SSPTYSPSSPYSSGASP------DYSPSAGYSPTLP 267
NYSP P YSP +P+YSP +PTYSP SG + DYSPS+ P P
Sbjct: 1978 NYSPLEPDYSPGTPTYSPDGTPTYSPDGRGFSGTAAKNISPMDYSPSSPSGPGTP 2032
Score = 99.8 bits (247), Expect = 1e-19
Identities = 59/126 (46%), Positives = 77/126 (61%), Gaps = 7/126 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPT---SPSYNPQSAKY--SP-SIAYSPSNARLSPASPY 426
S +PG + SPS + + P SP+++PQ + SP S Y PS +R + Y
Sbjct: 1541 SGMTPGAASFSPSAHSDASGFSPAGGFSPAWSPQDSMSLGSPDSSPYIPSPSRNVMSPSY 1600
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SP SP ++P SP+ SP+SP YSP+SP YSP+SP S SP YSP S GYSPT P YSP+S
Sbjct: 1601 SPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTS 1660
Query: 248 TGQYTP 231
Y+P
Sbjct: 1661 P-SYSP 1665
[83][TOP]
>UniRef100_UPI000186501C hypothetical protein BRAFLDRAFT_115025 n=1 Tax=Branchiostoma floridae
RepID=UPI000186501C
Length = 1956
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNY+PTSP YSPTSPSYSP+SP+YSP+SP S SP YSPS+ YSP P YSPSS
Sbjct: 1745 SPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQSPSYSPSSP-S 1803
Query: 239 YTP 231
Y+P
Sbjct: 1804 YSP 1806
Score = 170 bits (431), Expect = 7e-41
Identities = 86/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSP SP+YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1622 YSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1682 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1740
Query: 239 YTP 231
Y+P
Sbjct: 1741 YSP 1743
Score = 164 bits (414), Expect = 6e-39
Identities = 85/128 (66%), Positives = 95/128 (74%), Gaps = 8/128 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSPSYSP SPSY PTSPSY+P S YSP S +YSPS+ SP+SP
Sbjct: 1755 YSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQSPSYSPSSPSYSPSSPNPSSP 1814
Query: 428 -YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSP 255
Y+PTSP YSP+SP YSP+SP YSP+SPTYSPSS S ASP YSPS Y+PT P YSP
Sbjct: 1815 KYTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSP 1874
Query: 254 SSTGQYTP 231
+S YTP
Sbjct: 1875 ASP-TYTP 1881
Score = 161 bits (408), Expect = 3e-38
Identities = 90/149 (60%), Positives = 103/149 (69%), Gaps = 7/149 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP Y+PT
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPT 1751
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
SP YSPTSPSYSPTSPSYSP+SP+YSP SP +SP+YSP S YSP+ P YSPS
Sbjct: 1752 SPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSP----SSPNYSPQSPSYSPSSPSYSPS 1807
Query: 251 STGQYTPHEGDKKDKTGKKDASKDDKGNP 165
S +P K T K + K +P
Sbjct: 1808 SPNPSSP----KYTPTSPKYSPSSPKYSP 1832
Score = 161 bits (407), Expect = 4e-38
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 6/132 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+PTSP YSP+SP YSP+SP Y PTSP+Y+P SAKYSP S +YSPS + +P SP YSP
Sbjct: 1816 YTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPA 1875
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP Y+PTSP YSPTSPSY+P +P YSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1876 SPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGSTYSPTTPGYSPAS 1935
Query: 248 TGQYTPHEGDKK 213
Y+P + +
Sbjct: 1936 P-TYSPESPESR 1946
Score = 159 bits (402), Expect = 2e-37
Identities = 84/131 (64%), Positives = 95/131 (72%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSPGY--------SPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSP SP Y +P SP YSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1593 YSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSP 1652
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1653 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1713 YSPTSP-SYSP 1722
Score = 156 bits (395), Expect = 1e-36
Identities = 90/149 (60%), Positives = 100/149 (67%), Gaps = 29/149 (19%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP+Y P S KYSP S +YSP++ SPASP YSPT
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPT 1779
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP-------------------SSPYSSGASPDYSP 294
SP+YSP+SP+YSP SPSYSPSSP+YSP SSP S +SP YSP
Sbjct: 1780 SPSYSPSSPNYSPQSPSYSPSSPSYSPSSPNPSSPKYTPTSPKYSPSSPKYSPSSPKYSP 1839
Query: 293 --------SAGYSPTLPGYSPSSTGQYTP 231
SA YSP P YSP ST +YTP
Sbjct: 1840 TSPTYSPSSAKYSPASPSYSP-STPKYTP 1867
Score = 142 bits (359), Expect = 2e-32
Identities = 79/120 (65%), Positives = 89/120 (74%), Gaps = 4/120 (3%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLSPASP-YSPTSPN 408
SPG P SPSYSP SP+Y P SP PQS YSP S +YSP++ SPASP YSPTSP+
Sbjct: 1584 SPG-GPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPS 1642
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1701
Score = 129 bits (325), Expect = 1e-28
Identities = 78/130 (60%), Positives = 86/130 (66%), Gaps = 11/130 (8%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP---------SIAYSPSNARLSPA 435
SP SPG P SP Y P SP GP SPSY+P S Y P S YSP++ SP
Sbjct: 1571 SPGSPG--PASP-YIP-SPG-GPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPT 1625
Query: 434 SP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
SP YSP SPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P Y
Sbjct: 1626 SPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1685
Query: 260 SPSSTGQYTP 231
SP+S Y+P
Sbjct: 1686 SPTSP-SYSP 1694
Score = 92.4 bits (228), Expect = 2e-17
Identities = 63/139 (45%), Positives = 78/139 (56%), Gaps = 23/139 (16%)
Frame = -3
Query: 578 SPGY-SPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSP-SNARLSPASPYSPT---- 417
SPG S +P + SPS + +P A YSP+ + +P S PASPY P+
Sbjct: 1531 SPGLGSGMTPGAAGFSPSAASDASGMSP--AGYSPAWSPTPGSPGSPGPASPYIPSPGGP 1588
Query: 416 -SPNYSPTSPS---------------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 288
SP+YSP SP+ YSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1589 MSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSP 1648
Query: 287 GYSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1649 SYSPTSPSYSPTSP-SYSP 1666
Score = 90.9 bits (224), Expect = 7e-17
Identities = 46/84 (54%), Positives = 52/84 (61%), Gaps = 12/84 (14%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP SP+Y+PTSP Y PTSPSY P + KYSP S YSP++ SP SP
Sbjct: 1865 YTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGSTY 1924
Query: 428 ------YSPTSPNYSPTSPSYSPT 375
YSP SP YSP SP T
Sbjct: 1925 SPTTPGYSPASPTYSPESPESRAT 1948
[84][TOP]
>UniRef100_UPI00005A0B27 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 18 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B27
Length = 1831
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1533 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1592
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1593 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1651
Query: 239 YTP 231
Y+P
Sbjct: 1652 YSP 1654
Score = 169 bits (427), Expect = 2e-40
Identities = 81/122 (66%), Positives = 99/122 (81%), Gaps = 2/122 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1603 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1662
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP+ YSP+ P Y+P+S +Y
Sbjct: 1663 SPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSYSPSSPEYTPTSP-KY 1721
Query: 236 TP 231
+P
Sbjct: 1722 SP 1723
Score = 159 bits (401), Expect = 2e-37
Identities = 83/124 (66%), Positives = 93/124 (75%), Gaps = 4/124 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS-YSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSP 420
YSPTSP Y P SP Y+P SPSY PTSPSY+P S YSP S YSP++ SP SP YSP
Sbjct: 1511 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1570
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1571 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP- 1629
Query: 242 QYTP 231
Y+P
Sbjct: 1630 SYSP 1633
Score = 155 bits (393), Expect = 2e-36
Identities = 79/147 (53%), Positives = 92/147 (62%), Gaps = 33/147 (22%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------ 429
YSP+ P Y+PTSPSYSPTSPSY PTSP+Y P S YSP+ +YSPS+ +P SP
Sbjct: 1666 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSYSPSSPEYTPTSPKYSPTS 1725
Query: 428 -----------------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSS 318
YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S
Sbjct: 1726 PKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYS 1785
Query: 317 GASPDYSPS----AGYSPTLPGYSPSS 249
SP YSP+ + YSPT PGYSP+S
Sbjct: 1786 PTSPTYSPTSPKGSTYSPTSPGYSPTS 1812
Score = 154 bits (390), Expect = 4e-36
Identities = 84/134 (62%), Positives = 94/134 (70%), Gaps = 18/134 (13%)
Frame = -3
Query: 578 SPGYSPT---------------SPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNAR 447
SP YSPT SPSYSPTSPSY PTSPSY+P S YSP S +YSP++
Sbjct: 1508 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1567
Query: 446 LSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPT 273
SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT
Sbjct: 1568 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1627
Query: 272 LPGYSPSSTGQYTP 231
P YSP+S Y+P
Sbjct: 1628 SPSYSPTSP-SYSP 1640
Score = 154 bits (390), Expect = 4e-36
Identities = 82/143 (57%), Positives = 95/143 (66%), Gaps = 23/143 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI--------AYSPSNARLSPA 435
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSPS +YSP++ SP
Sbjct: 1631 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPT 1690
Query: 434 SP--------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 297
SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YS
Sbjct: 1691 SPNYTPMSPNYSPTPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYS 1750
Query: 296 P-SAGYSPTLPGYSPSSTGQYTP 231
P S YSPT P Y+P+S +Y+P
Sbjct: 1751 PTSPTYSPTSPVYTPTSP-KYSP 1772
Score = 151 bits (382), Expect = 3e-35
Identities = 77/129 (59%), Positives = 93/129 (72%), Gaps = 2/129 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
YSP+SP Y+PTSP YSPTSP Y PTSP Y+P S YSP+ YSP++ SP SP Y+PT
Sbjct: 1707 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPT 1766
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS +S
Sbjct: 1767 SPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYSLTSPA-I 1822
Query: 236 TPHEGDKKD 210
+P + D+++
Sbjct: 1823 SPDDSDEEN 1831
Score = 88.6 bits (218), Expect = 3e-16
Identities = 50/94 (53%), Positives = 58/94 (61%), Gaps = 16/94 (17%)
Frame = -3
Query: 464 SPSNARLSPASPYSPTS---------------PNYSPTSPSYSPTSPSYSPSSPTYSPSS 330
+P A + + YSPTS P+YSPTSPSYSPTSPSYSP+SP YSP+S
Sbjct: 1499 TPGAAGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1558
Query: 329 PYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1559 PSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1591
Score = 81.3 bits (199), Expect = 5e-14
Identities = 45/88 (51%), Positives = 54/88 (61%), Gaps = 16/88 (18%)
Frame = -3
Query: 446 LSPASPYSPTSPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYSSGA 312
++P + SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S
Sbjct: 1498 MTPGAAGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1557
Query: 311 SPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP YSP S YSPT P YSP+S Y+P
Sbjct: 1558 SPSYSPTSPSYSPTSPSYSPTSP-SYSP 1584
[85][TOP]
>UniRef100_UPI0001951285 220 kDa DNA-directed RNA polymerase polypeptide A n=1 Tax=Canis lupus
familiaris RepID=UPI0001951285
Length = 1969
Score = 172 bits (436), Expect = 2e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1682 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1740
Query: 239 YTP 231
Y+P
Sbjct: 1741 YSP 1743
Score = 169 bits (428), Expect = 2e-40
Identities = 86/129 (66%), Positives = 99/129 (76%), Gaps = 9/129 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1744
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-------SAGYSPTLPGYS 258
SPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+YSP S YSPT P YS
Sbjct: 1745 SPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPNSPTSPSYSPTSPSYS 1804
Query: 257 PSSTGQYTP 231
PSS +YTP
Sbjct: 1805 PSSP-RYTP 1812
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1593 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1652
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1653 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1713 YSPTSP-SYSP 1722
Score = 164 bits (416), Expect = 4e-39
Identities = 86/144 (59%), Positives = 101/144 (70%), Gaps = 2/144 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSPTSP YSPTSP+YSP+ P+Y PTSPSY+P S YSP S Y+P + SP SP SPTS
Sbjct: 1734 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPNSPTS 1793
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQY 237
P+YSPTSPSYSP+SP Y+P SPTY+PSSP S +SP YSP S Y+PT P YSPSS +Y
Sbjct: 1794 PSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSP-EY 1852
Query: 236 TPHEGDKKDKTGKKDASKDDKGNP 165
TP K T K + K +P
Sbjct: 1853 TP-TSPKYSPTSPKYSPTSPKYSP 1875
Score = 161 bits (407), Expect = 4e-38
Identities = 80/120 (66%), Positives = 92/120 (76%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPT
Sbjct: 1831 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1890
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1891 SPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1950
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1838 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1897
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1898 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1954
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1955 LTSPA-ISPDDSDEEN 1969
Score = 146 bits (368), Expect = 1e-33
Identities = 83/132 (62%), Positives = 94/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG----YSPT-----SPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLS 441
SP SPG Y P+ SPSYSPTSP+Y P SP Y PQS YSP S +YSP++ S
Sbjct: 1571 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1630
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1631 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1691 SYSPTSP-SYSP 1701
Score = 145 bits (367), Expect = 2e-33
Identities = 81/143 (56%), Positives = 96/143 (67%), Gaps = 23/143 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP--------------SIAYSPSN 453
YSP+ P Y+PTSPSYSPTSPSY PTSP+Y P S YSP S +YSPS+
Sbjct: 1748 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPNSPTSPSYSPTSPSYSPSS 1807
Query: 452 ARLSPASP-YSPTSPNYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 297
R +P SP Y+P+SP+YSP TSP Y+PTSPSYSPSSP Y+P+SP S SP YS
Sbjct: 1808 PRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 1867
Query: 296 P-SAGYSPTLPGYSPSSTGQYTP 231
P S YSPT P YSP +T +Y+P
Sbjct: 1868 PTSPKYSPTSPTYSP-TTPKYSP 1889
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1558 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1618 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1678 YSPTSPSYSPTSP-SYSP 1694
Score = 97.4 bits (241), Expect = 7e-19
Identities = 66/154 (42%), Positives = 84/154 (54%), Gaps = 38/154 (24%)
Frame = -3
Query: 578 SPGYSP----TSPSYSPTSPSYG----PTSPSYNPQSAK--------YSPSIAYSP-SNA 450
SP +P +P+Y SPS G P + ++P +A YSP+ + +P S
Sbjct: 1514 SPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPG 1573
Query: 449 RLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSS 330
P+SPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+S
Sbjct: 1574 SPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTS 1633
Query: 329 PYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1634 PNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
[86][TOP]
>UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CBQ3_YARLI
Length = 1750
Score = 172 bits (436), Expect = 2e-41
Identities = 91/140 (65%), Positives = 104/140 (74%), Gaps = 9/140 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ YSPTS
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS--------YSPTS 1670
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YSSGASPDYSP-SAGYSPTLPGYSPSS--- 249
P+YSPTSPSYSPTSPSYSP+SP+YSPSSP +++GAS YSP S YSPT P YSP+S
Sbjct: 1671 PSYSPTSPSYSPTSPSYSPTSPSYSPSSPKFNAGASTSYSPTSPSYSPTSPSYSPTSPSY 1730
Query: 248 ---TGQYTPHEGDKKDKTGK 198
+ Y+P GD KDK K
Sbjct: 1731 SPTSPSYSPGSGDSKDKEKK 1750
Score = 134 bits (337), Expect = 5e-30
Identities = 74/124 (59%), Positives = 89/124 (71%), Gaps = 4/124 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYG--PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSP 420
+ SPG++ TSPSYSP+SP G SPS++P S ++ A SPS SP+SP YSP
Sbjct: 1547 FGAASPGFAATSPSYSPSSPGMGLGAASPSFSPSSPAFA---ATSPS---YSPSSPSYSP 1600
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
TSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1601 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP- 1659
Query: 242 QYTP 231
Y+P
Sbjct: 1660 SYSP 1663
Score = 82.8 bits (203), Expect = 2e-14
Identities = 58/165 (35%), Positives = 73/165 (44%), Gaps = 66/165 (40%)
Frame = -3
Query: 527 YGPTSPSYNPQSAKYSPSIAYSP-------------------------SNARLSPASP-- 429
Y +SP+Y+ A+ + +SP S + +P SP
Sbjct: 1486 YDSSSPAYDALQARGGGDVIFSPIGTSGAPEMSGGFSEYGGFGHGGDGSGSAYTPTSPFS 1545
Query: 428 ---------------YSP-----------------------TSPNYSPTSPSYSPTSPSY 363
YSP TSP+YSP+SPSYSPTSPSY
Sbjct: 1546 SFGAASPGFAATSPSYSPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPSYSPTSPSY 1605
Query: 362 SPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1606 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1649
Score = 82.8 bits (203), Expect = 2e-14
Identities = 54/123 (43%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
Frame = -3
Query: 569 YSPTSP--SYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPT 396
Y+PTSP S+ SP + TSPSY+P SP + +
Sbjct: 1538 YTPTSPFSSFGAASPGFAATSPSYSPS----SPGMGLGAA-------------------- 1573
Query: 395 SPSYSP-------TSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SPS+SP TSPSYSPSSP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1574 SPSFSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1632
Query: 239 YTP 231
Y+P
Sbjct: 1633 YSP 1635
[87][TOP]
>UniRef100_UPI0000D5670C PREDICTED: similar to GA13798-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D5670C
Length = 2007
Score = 172 bits (435), Expect = 2e-41
Identities = 86/117 (73%), Positives = 96/117 (82%), Gaps = 3/117 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1714
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SP+YSPTSPSYSPTSPSYSP+SP+YSPSSP + ASP YSP S YSP+ P YSP+S
Sbjct: 1715 SPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPAS 1771
Score = 171 bits (432), Expect = 5e-41
Identities = 87/130 (66%), Positives = 99/130 (76%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSPS+ R +PASP
Sbjct: 1697 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSYSPT 1756
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
YSP+SP YSP SPS+SP+SP YSP+SP+YSP+SP +G SP YSP S YSPT P Y
Sbjct: 1757 SPSYSPSSPQYSPASPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNY 1816
Query: 260 SPSSTGQYTP 231
SPSS Q+TP
Sbjct: 1817 SPSSP-QHTP 1825
Score = 168 bits (426), Expect = 3e-40
Identities = 86/129 (66%), Positives = 100/129 (77%), Gaps = 9/129 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1676 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1735
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSS--- 249
SP+YSP+SP Y+P SPSYSP+SP+YSPSSP S ASP +SPS+ YSPT P YSP+S
Sbjct: 1736 SPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPASPSFSPSSPKYSPTSPSYSPTSPSF 1795
Query: 248 ---TGQYTP 231
+ QY+P
Sbjct: 1796 AGGSPQYSP 1804
Score = 154 bits (388), Expect = 7e-36
Identities = 91/159 (57%), Positives = 103/159 (64%), Gaps = 39/159 (24%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP--------SIAYSPSNARLSPA 435
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S +Y+P S +YSPS+ + SPA
Sbjct: 1711 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPA 1770
Query: 434 SP--------YSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGA---- 312
SP YSPTSP+YSPTSPS YSPTSPSYSP+SP YSPSSP + A
Sbjct: 1771 SPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTPAASSR 1830
Query: 311 ----SPDYSPSA-GYSPTLP-------GYSPSSTGQYTP 231
SP+YSPS+ YSPT P YSP+S YTP
Sbjct: 1831 YSPSSPNYSPSSPSYSPTSPQYSPHSTKYSPTSP-TYTP 1868
Score = 152 bits (383), Expect = 2e-35
Identities = 77/121 (63%), Positives = 90/121 (74%), Gaps = 1/121 (0%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSP+SP + PTSPS +P SP Y PTSP Y+P S YSP+ SPS + SP+ YSPTSP
Sbjct: 1585 YSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPT---SPSYSPTSPS--YSPTSP 1639
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYT 234
+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+
Sbjct: 1640 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYS 1698
Query: 233 P 231
P
Sbjct: 1699 P 1699
Score = 144 bits (364), Expect = 4e-33
Identities = 77/131 (58%), Positives = 90/131 (68%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSP SP +SP+SP YSPTSPSY PTSPS+ S +YSP S +YSP++ SP+SP
Sbjct: 1767 YSPASPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTPA 1826
Query: 428 ----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
YSP+SPNYSP+SPSYSPTSP YSP S YSP+SP + SP YSP S YS P
Sbjct: 1827 ASSRYSPSSPNYSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSPASPAYSSQPPR 1886
Query: 263 YSPSSTGQYTP 231
YSPSS Y+P
Sbjct: 1887 YSPSSP-SYSP 1896
Score = 137 bits (346), Expect = 5e-31
Identities = 75/133 (56%), Positives = 92/133 (69%), Gaps = 18/133 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS-------YSPTSPSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSP 438
YSPTSP YSPTSPS YSPTSPSY PTSP+Y+P S +++P+ + YSPS+ SP
Sbjct: 1781 YSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTPAASSRYSPSSPNYSP 1840
Query: 437 ASP-YSPTSPNYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGY 282
+SP YSPTSP YSP TSP+Y+PTSPSYSP+SP YS P S +SP YSP++
Sbjct: 1841 SSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSPASPAYSSQPPRYSPSSPSYSPTSPI 1900
Query: 281 S-PTLPGYSPSST 246
+ P P YS SS+
Sbjct: 1901 TLPPSPYYSRSSS 1913
Score = 133 bits (335), Expect = 9e-30
Identities = 75/127 (59%), Positives = 84/127 (66%), Gaps = 8/127 (6%)
Frame = -3
Query: 587 SPTSPGYSP-------TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP 429
+P SP SP SPSYSP+SPS+ PTSPS P S YSP+ SP
Sbjct: 1565 TPQSPAMSPFMASPHGQSPSYSPSSPSFQPTSPSMTPVSPGYSPT----------SPG-- 1612
Query: 428 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+
Sbjct: 1613 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1672
Query: 251 STGQYTP 231
S Y+P
Sbjct: 1673 SP-SYSP 1678
Score = 129 bits (324), Expect = 2e-28
Identities = 80/159 (50%), Positives = 91/159 (57%), Gaps = 40/159 (25%)
Frame = -3
Query: 587 SPTSPGYS---------------------PT----------------SPSYSPTSPSYGP 519
S +PG PT SPSYSP+SPS+ P
Sbjct: 1535 SGMTPGGPAFSPSAASDASGMSPGYGAWSPTPQSPAMSPFMASPHGQSPSYSPSSPSFQP 1594
Query: 518 TSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT 345
TSPS P S YSP S YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+
Sbjct: 1595 TSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1654
Query: 344 YSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1692
Score = 125 bits (315), Expect = 2e-27
Identities = 69/131 (52%), Positives = 86/131 (65%), Gaps = 18/131 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS--------YGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP YSPTSP+YSP+SP Y P+SP+Y+P S YSP S YSP + + SP
Sbjct: 1802 YSPTSPSYSPTSPNYSPSSPQHTPAASSRYSPSSPNYSPSSPSYSPTSPQYSPHSTKYSP 1861
Query: 437 ASP-YSPTSPNYSPTSPSYS-------PTSPSYSPSSPTYSPSSPYSSGASPDYS-PSAG 285
SP Y+PTSP+YSP SP+YS P+SPSYSP+SP P SPY S +S Y+ S
Sbjct: 1862 TSPTYTPTSPSYSPASPAYSSQPPRYSPSSPSYSPTSPITLPPSPYYSRSSSTYTFSSRD 1921
Query: 284 YSPTLPGYSPS 252
Y+ + P YSP+
Sbjct: 1922 YTYSSPPYSPT 1932
Score = 61.2 bits (147), Expect = 6e-08
Identities = 42/124 (33%), Positives = 56/124 (45%), Gaps = 40/124 (32%)
Frame = -3
Query: 482 SPSIAYSPSNARLSPA-----SPYSPTSPNYSPTSPSYSPT------------------- 375
SP A +P N +P SP++ +P P++SP+
Sbjct: 1507 SPGAAMTPWNQGATPYVGSAWSPHNLMGSGMTPGGPAFSPSAASDASGMSPGYGAWSPTP 1566
Query: 374 ---------------SPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
SPSYSPSSP++ P+SP + SP YSP S GYSPT P YSP+S
Sbjct: 1567 QSPAMSPFMASPHGQSPSYSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSP- 1625
Query: 242 QYTP 231
Y+P
Sbjct: 1626 SYSP 1629
Score = 58.9 bits (141), Expect = 3e-07
Identities = 50/124 (40%), Positives = 61/124 (49%), Gaps = 10/124 (8%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSP P SP YS +S +Y +S Y S YSP+I P + TSP
Sbjct: 1894 YSPTSPITLPPSPYYSRSSSTYTFSSRDYTYSSPPYSPTI---PQDEMF--------TSP 1942
Query: 410 NYSPTSPSYSPTSPSYS-PSSPTYSP-SSPYSS-------GASPDYSP-SAGYSPTLPGY 261
YSPT P Y + + + SPTY P SP SS SP YS S+ + PT P +
Sbjct: 1943 VYSPTIPKYFRSDINRNRTESPTYYPLYSPISSRRVYMEEPPSPYYSSRSSVFFPTSPSF 2002
Query: 260 SPSS 249
S SS
Sbjct: 2003 SSSS 2006
[88][TOP]
>UniRef100_P16356 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
elegans RepID=RPB1_CAEEL
Length = 1852
Score = 172 bits (435), Expect = 2e-41
Identities = 85/122 (69%), Positives = 96/122 (78%), Gaps = 2/122 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSPS+ SP+SP YSP+
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPS 1671
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SP YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP Y GYSP+ P YSPSS Y
Sbjct: 1672 SPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSP-TY 1730
Query: 236 TP 231
+P
Sbjct: 1731 SP 1732
Score = 163 bits (412), Expect = 1e-38
Identities = 83/128 (64%), Positives = 96/128 (75%), Gaps = 8/128 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTS 414
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S Y YSPS+ + SP+SP YSPTS
Sbjct: 1675 YSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTS 1734
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG------ASPDYSP-SAGYSPTLPGYSP 255
P+YSPTSP YSPTSP YSPSSPTY+PSSP + +SP YSP S YSPT P Y+P
Sbjct: 1735 PSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTP 1794
Query: 254 SSTGQYTP 231
SS QY+P
Sbjct: 1795 SSP-QYSP 1801
Score = 151 bits (382), Expect = 3e-35
Identities = 77/129 (59%), Positives = 92/129 (71%), Gaps = 9/129 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP----- 429
YSP+SP YSP+SP+YSPTSPSY PTSP Y+P S +YSPS Y+PS+ +P SP
Sbjct: 1716 YSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSS 1775
Query: 428 --YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYS 258
YSPTSP YSPTSPSY+P+SP YSP+SPTY+PS G S YSP S YSP+ P YS
Sbjct: 1776 PQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSPSSPTYS 1835
Query: 257 PSSTGQYTP 231
P+S Y+P
Sbjct: 1836 PASP-SYSP 1843
Score = 147 bits (371), Expect = 6e-34
Identities = 89/170 (52%), Positives = 97/170 (57%), Gaps = 50/170 (29%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP----- 429
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSPS +YSPS+ R SP SP
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPT 1685
Query: 428 ----------YSPTSPNYSPTSP---------------------------SYSPTSPSYS 360
YSPTSP YSPTSP SYSPTSP YS
Sbjct: 1686 SPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYS 1745
Query: 359 PSSPTYSPSSPYSSGASPDYSP-------SAGYSPTLPGYSPSSTGQYTP 231
P+SP YSPSSP + +SP Y+P S YSPT P YSP+S YTP
Sbjct: 1746 PTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSP-SYTP 1794
Score = 139 bits (349), Expect = 2e-31
Identities = 72/129 (55%), Positives = 85/129 (65%), Gaps = 15/129 (11%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTS 414
YSPTSP YSPTSP YSPTSP Y P+SP+Y P S Y+P+ S+ + SP SP YSPTS
Sbjct: 1730 YSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTS 1789
Query: 413 PNYSPTSPSYSPTSPSYSPS--------------SPTYSPSSPYSSGASPDYSPSAGYSP 276
P+Y+P+SP YSPTSP+Y+PS SPTYSPSSP S ASP YSPS+
Sbjct: 1790 PSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSPSSPTYSPASPSYSPSS---- 1845
Query: 275 TLPGYSPSS 249
P Y P+S
Sbjct: 1846 --PTYDPNS 1852
Score = 130 bits (326), Expect = 1e-28
Identities = 72/127 (56%), Positives = 86/127 (67%), Gaps = 7/127 (5%)
Frame = -3
Query: 590 YSPTSPG-----YSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP 429
+SP SPG SP +PSY SP Y P+SP ++ S YSP+ SPS + SPA+
Sbjct: 1548 WSPASPGDPLGALSPRTPSYGGMSPGVYSPSSPQFSMTSPHYSPT---SPSYSPTSPAAG 1604
Query: 428 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
SP SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSP+ P YSPS
Sbjct: 1605 QSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPS 1664
Query: 251 STGQYTP 231
S Y+P
Sbjct: 1665 SP-SYSP 1670
Score = 83.6 bits (205), Expect = 1e-14
Identities = 59/167 (35%), Positives = 77/167 (46%), Gaps = 65/167 (38%)
Frame = -3
Query: 536 SPSYGPTSPSYNPQSAKYSPSIA---YSPSNARLSPASPYSP------------------ 420
SPS SP+++P ++ +P+ A +SP+ +SP + +SP
Sbjct: 1491 SPSNREFSPAHSPWNSGVTPTYAGAAWSPTTGGMSPGAGFSPAGNTDGGASPFNEGGWSP 1550
Query: 419 ----------------------------------TSPNYSPTSPSYSPT---------SP 369
TSP+YSPTSPSYSPT SP
Sbjct: 1551 ASPGDPLGALSPRTPSYGGMSPGVYSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSP 1610
Query: 368 SYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1611 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1656
[89][TOP]
>UniRef100_B7G9I2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G9I2_PHATR
Length = 1706
Score = 171 bits (434), Expect = 3e-41
Identities = 89/132 (67%), Positives = 102/132 (77%), Gaps = 4/132 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 1573 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1632
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1633 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA- 1691
Query: 239 YTPHEG-DKKDK 207
Y+P G DKKD+
Sbjct: 1692 YSPSGGDDKKDE 1703
Score = 166 bits (420), Expect = 1e-39
Identities = 84/123 (68%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 1531 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1590
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1591 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA- 1649
Query: 239 YTP 231
Y+P
Sbjct: 1650 YSP 1652
Score = 157 bits (397), Expect = 6e-37
Identities = 83/122 (68%), Positives = 94/122 (77%), Gaps = 2/122 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S AYSP+ SPA YSPTS
Sbjct: 1517 YSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT----SPA--YSPTS 1570
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQY 237
P YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P YSP+S Y
Sbjct: 1571 PAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-Y 1629
Query: 236 TP 231
+P
Sbjct: 1630 SP 1631
Score = 132 bits (331), Expect = 3e-29
Identities = 75/122 (61%), Positives = 86/122 (70%), Gaps = 6/122 (4%)
Frame = -3
Query: 578 SPGYSPTSPSYSP--TSPSYGP-TSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 414
SP YSP S SY S SYG SP+Y+P S +YSP S AYSP++ SP SP YSPTS
Sbjct: 1490 SPAYSPDSGSYGSGFASGSYGAGDSPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTS 1549
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQY 237
P YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P YSP+S Y
Sbjct: 1550 PAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-Y 1608
Query: 236 TP 231
+P
Sbjct: 1609 SP 1610
Score = 109 bits (273), Expect = 1e-22
Identities = 66/123 (53%), Positives = 76/123 (61%), Gaps = 4/123 (3%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTS--PSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPT 417
SP G + SP+ S P+Y P S SY A S SP+ SP SP YSPT
Sbjct: 1471 SPFVDGGAAFSPAVGAASFSPAYSPDSGSYGSGFASGSYGAGDSPA---YSPTSPQYSPT 1527
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1528 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA- 1586
Query: 239 YTP 231
Y+P
Sbjct: 1587 YSP 1589
Score = 77.0 bits (188), Expect = 1e-12
Identities = 48/117 (41%), Positives = 59/117 (50%), Gaps = 18/117 (15%)
Frame = -3
Query: 527 YGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSP----------------- 399
Y T + +P + + + A SPA + SP YSP
Sbjct: 1453 YATTPFAASPMVGDGAAASPFVDGGAAFSPAVGAASFSPAYSPDSGSYGSGFASGSYGAG 1512
Query: 398 TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP+YSPTSP YSP+SP YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1513 DSPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1568
[90][TOP]
>UniRef100_C3ZES3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3ZES3_BRAFL
Length = 1934
Score = 171 bits (434), Expect = 3e-41
Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1702
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S Y+PT P YSP+S
Sbjct: 1703 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSP-S 1761
Query: 239 YTP 231
Y+P
Sbjct: 1762 YSP 1764
Score = 170 bits (431), Expect = 7e-41
Identities = 86/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSP SP+YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1622 YSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1682 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1740
Query: 239 YTP 231
Y+P
Sbjct: 1741 YSP 1743
Score = 169 bits (429), Expect = 1e-40
Identities = 87/127 (68%), Positives = 96/127 (75%), Gaps = 6/127 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSP---SS 249
SP+YSPTSPSYSPTSPSYSP+SP Y+P+SP S SP YSP S YSP P YSP S+
Sbjct: 1724 SPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTILSN 1783
Query: 248 TGQYTPH 228
Q PH
Sbjct: 1784 LTQLQPH 1790
Score = 159 bits (402), Expect = 2e-37
Identities = 84/131 (64%), Positives = 95/131 (72%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSPGY--------SPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSP SP Y +P SP YSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1593 YSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSP 1652
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1653 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1713 YSPTSP-SYSP 1722
Score = 151 bits (381), Expect = 4e-35
Identities = 85/155 (54%), Positives = 97/155 (62%), Gaps = 35/155 (22%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSPSYSPTSPSY PTSP+Y P S KYSP S +YSP++ SPASP
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPT 1779
Query: 428 ---------------------YSPTSPNYSPTSPSYSPTSPSYSPS-------SPTYSPS 333
YSP+SP YSP+SP YSPTSP+YSPS SP+YSPS
Sbjct: 1780 ILSNLTQLQPHLTPVHSHVTQYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPS 1839
Query: 332 SPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
+P + SP YSP S Y+PT P YSP+S YTP
Sbjct: 1840 TPKYTPTSPKYSPASPTYTPTSPKYSPTSP-SYTP 1873
Score = 150 bits (379), Expect = 7e-35
Identities = 85/171 (49%), Positives = 98/171 (57%), Gaps = 45/171 (26%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPT-------------------------SPSYNPQSAK 486
YSPTSP YSPTSPSYSP SPSY PT SP Y+P S K
Sbjct: 1755 YSPTSPSYSPTSPSYSPASPSYSPTILSNLTQLQPHLTPVHSHVTQYSPSSPKYSPSSPK 1814
Query: 485 YSP-SIAYSPSNARLSPASP---------------YSPTSPNYSPTSPSYSPTSPSYSPS 354
YSP S YSPS+A+ SPASP YSP SP Y+PTSP YSPTSPSY+P
Sbjct: 1815 YSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPD 1874
Query: 353 SPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSSTGQYTPHEGDKK 213
+P YSP+SP S SP YSP+ + YSPT PGYSP+S Y+P + +
Sbjct: 1875 TPKYSPTSPKYSPTSPTYSPTSPKGSTYSPTTPGYSPASP-TYSPESPESR 1924
Score = 143 bits (361), Expect = 9e-33
Identities = 71/129 (55%), Positives = 89/129 (68%), Gaps = 2/129 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP+SP YSPTSP+YSP+S Y P SPSY+P + KY+P S YSP++ +P SP YSPT
Sbjct: 1808 YSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPT 1867
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SP+Y+P +P YSPTSP YSP+SPTYSP+SP S SP + GYSP P YSP S
Sbjct: 1868 SPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGSTYSP---TTPGYSPASPTYSPESPESR 1924
Query: 236 TPHEGDKKD 210
E ++ +
Sbjct: 1925 ATQEEEEDE 1933
Score = 142 bits (359), Expect = 2e-32
Identities = 79/120 (65%), Positives = 89/120 (74%), Gaps = 4/120 (3%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPS-YNPQSAKYSP-SIAYSPSNARLSPASP-YSPTSPN 408
SPG P SPSYSP SP+Y P SP PQS YSP S +YSP++ SPASP YSPTSP+
Sbjct: 1584 SPG-GPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPS 1642
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1701
Score = 129 bits (325), Expect = 1e-28
Identities = 78/130 (60%), Positives = 86/130 (66%), Gaps = 11/130 (8%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP---------SIAYSPSNARLSPA 435
SP SPG P SP Y P SP GP SPSY+P S Y P S YSP++ SP
Sbjct: 1571 SPGSPG--PASP-YIP-SPG-GPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPT 1625
Query: 434 SP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
SP YSP SPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P Y
Sbjct: 1626 SPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1685
Query: 260 SPSSTGQYTP 231
SP+S Y+P
Sbjct: 1686 SPTSP-SYSP 1694
Score = 92.4 bits (228), Expect = 2e-17
Identities = 63/139 (45%), Positives = 78/139 (56%), Gaps = 23/139 (16%)
Frame = -3
Query: 578 SPGY-SPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSP-SNARLSPASPYSPT---- 417
SPG S +P + SPS + +P A YSP+ + +P S PASPY P+
Sbjct: 1531 SPGLGSGMTPGAAGFSPSAASDASGMSP--AGYSPAWSPTPGSPGSPGPASPYIPSPGGP 1588
Query: 416 -SPNYSPTSPS---------------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 288
SP+YSP SP+ YSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1589 MSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSP 1648
Query: 287 GYSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1649 SYSPTSPSYSPTSP-SYSP 1666
[91][TOP]
>UniRef100_A1YIA7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pichia kudriavzevii
RepID=A1YIA7_ISSOR
Length = 1647
Score = 171 bits (434), Expect = 3e-41
Identities = 87/123 (70%), Positives = 99/123 (80%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 1477 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPT 1536
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1537 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP-Q 1595
Query: 239 YTP 231
Y+P
Sbjct: 1596 YSP 1598
Score = 171 bits (432), Expect = 5e-41
Identities = 87/123 (70%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ + SP SP YSPT
Sbjct: 1519 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPT 1578
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1579 SPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP-Q 1637
Query: 239 YTP 231
Y+P
Sbjct: 1638 YSP 1640
Score = 169 bits (429), Expect = 1e-40
Identities = 86/123 (69%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y PTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 1470 YGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1529
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1530 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSP-Q 1588
Query: 239 YTP 231
Y+P
Sbjct: 1589 YSP 1591
Score = 168 bits (425), Expect = 3e-40
Identities = 86/123 (69%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y PTSP Y PTSPSYSPTSP+Y PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 1463 YGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1522
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1523 SPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSP-Q 1581
Query: 239 YTP 231
Y+P
Sbjct: 1582 YSP 1584
Score = 168 bits (425), Expect = 3e-40
Identities = 86/123 (69%), Positives = 94/123 (76%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S YSP++ + SP SP YSPT
Sbjct: 1526 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPT 1585
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1586 SPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP-S 1644
Query: 239 YTP 231
Y+P
Sbjct: 1645 YSP 1647
Score = 167 bits (422), Expect = 7e-40
Identities = 84/123 (68%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1498 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1557
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1558 SPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP-Q 1616
Query: 239 YTP 231
Y+P
Sbjct: 1617 YSP 1619
Score = 165 bits (417), Expect = 3e-39
Identities = 86/124 (69%), Positives = 96/124 (77%), Gaps = 4/124 (3%)
Frame = -3
Query: 590 YSPTSP-GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSP 420
Y PTSP GY TSPSY PTSPSYGPTSPSY+P S YSP S AYSP++ SP SP YSP
Sbjct: 1448 YQPTSPFGYGATSPSYGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1507
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
TSP YSPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1508 TSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP- 1566
Query: 242 QYTP 231
QY+P
Sbjct: 1567 QYSP 1570
Score = 164 bits (415), Expect = 5e-39
Identities = 84/123 (68%), Positives = 94/123 (76%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y TSP Y PTSPSY PTSPSY PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 1456 YGATSPSYGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1515
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1516 SPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP-Q 1574
Query: 239 YTP 231
Y+P
Sbjct: 1575 YSP 1577
[92][TOP]
>UniRef100_B0XAQ9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0XAQ9_CULQU
Length = 1874
Score = 171 bits (433), Expect = 4e-41
Identities = 87/135 (64%), Positives = 99/135 (73%), Gaps = 15/135 (11%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-------SIAYSPSNARLSPAS 432
YSPTSP YSPTSP+YSPTSP+Y PTSPSY+P S YSP S AYSP++ SP S
Sbjct: 1593 YSPTSPRYSPTSPNYSPTSPNYSPTSPSYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTS 1652
Query: 431 PYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA--------GYSP 276
PYSPTSP+YSPTSP+YSPTSPSYSPSSP+YSP+SP S SP YSP++ YSP
Sbjct: 1653 PYSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSP 1712
Query: 275 TLPGYSPSSTGQYTP 231
T P YSPSS Y+P
Sbjct: 1713 TSPNYSPSSP-HYSP 1726
Score = 164 bits (416), Expect = 4e-39
Identities = 81/122 (66%), Positives = 95/122 (77%), Gaps = 2/122 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSPSY P+SPSY+P S YSP S +YSP++ +PA+P YSPT
Sbjct: 1654 YSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPT 1713
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SPNYSP+SP YSPTSPSYSPSSP YSP+SP S SP Y S Y+P P YSP+S +Y
Sbjct: 1714 SPNYSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYGGSPQYTPASPQYSPTSP-KY 1772
Query: 236 TP 231
+P
Sbjct: 1773 SP 1774
Score = 161 bits (408), Expect = 3e-38
Identities = 85/129 (65%), Positives = 97/129 (75%), Gaps = 9/129 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSP+SPSY PTSPSY+P S YSP S Y+P+ SP SP YSP+
Sbjct: 1661 YSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPS 1720
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG------ASPDYSP-SAGYSPTLPGYS 258
SP+YSPTSPSYSP+SP YSP+SP+YSP+SP G ASP YSP S YSPT P YS
Sbjct: 1721 SPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYGGSPQYTPASPQYSPTSPKYSPTSPSYS 1780
Query: 257 PSSTGQYTP 231
PSS Q++P
Sbjct: 1781 PSSP-QHSP 1788
Score = 154 bits (388), Expect = 7e-36
Identities = 79/119 (66%), Positives = 89/119 (74%), Gaps = 3/119 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP+SP YSPTSPSYSPTSPSY PTSP+Y P + YSP S YSPS+ SP SP YSP+
Sbjct: 1675 YSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPS 1734
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
SP YSPTSPSYSPTSPSY SP Y+P+SP S SP YSP S YSP+ P +SP S+G
Sbjct: 1735 SPKYSPTSPSYSPTSPSYG-GSPQYTPASPQYSPTSPKYSPTSPSYSPSSPQHSPGSSG 1792
Score = 149 bits (376), Expect = 2e-34
Identities = 85/145 (58%), Positives = 99/145 (68%), Gaps = 25/145 (17%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y P +PSY+P S YSPS YSP++ SP+SP YSPT
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPT 1741
Query: 416 SPNYSPTSPSY-------------SPTSPSYSPSSPTYSPSSPY----SSGA-----SPD 303
SP+YSPTSPSY SPTSP YSP+SP+YSPSSP SSG+ SP
Sbjct: 1742 SPSYSPTSPSYGGSPQYTPASPQYSPTSPKYSPTSPSYSPSSPQHSPGSSGSNFMVNSPT 1801
Query: 302 YSPS-AGYSPTLPGYSPSSTGQYTP 231
YSP+ A YSP + YSP S +Y+P
Sbjct: 1802 YSPTTARYSPNMSSYSPGSQ-KYSP 1825
Score = 136 bits (343), Expect = 1e-30
Identities = 77/154 (50%), Positives = 94/154 (61%), Gaps = 27/154 (17%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTS 414
YSP+SP YSPTSPSYSP+SP Y PTSPSY+P S Y S Y+P++ + SP SP YSPTS
Sbjct: 1717 YSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYGGSPQYTPASPQYSPTSPKYSPTS 1776
Query: 413 PNYSPTSPSYSP---------TSPSYSPS--------------SPTYSPSSPYSSGASPD 303
P+YSP+SP +SP SP+YSP+ S YSP+SP + SP
Sbjct: 1777 PSYSPSSPQHSPGSSGSNFMVNSPTYSPTTARYSPNMSSYSPGSQKYSPTSPVYTPTSPH 1836
Query: 302 YSPSA-GYSPTLPGYSPSSTGQ--YTPHEGDKKD 210
YSPS+ YSPT GYSPSS Y+P +D
Sbjct: 1837 YSPSSPAYSPTGQGYSPSSPASPTYSPTSPSYED 1870
Score = 129 bits (325), Expect = 1e-28
Identities = 74/137 (54%), Positives = 80/137 (58%), Gaps = 24/137 (17%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY-------------SPTSPSYGPTSPSYNPQSAKYSP--------- 477
YSPTSP YSPTSPSY SPTSP Y PTSPSY+P S ++SP
Sbjct: 1738 YSPTSPSYSPTSPSYGGSPQYTPASPQYSPTSPKYSPTSPSYSPSSPQHSPGSSGSNFMV 1797
Query: 476 -SIAYSPSNARLSP-ASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
S YSP+ AR SP S YSP S YSPTSP Y+PTSP YSPSSP YSP+ G SP
Sbjct: 1798 NSPTYSPTTARYSPNMSSYSPGSQKYSPTSPVYTPTSPHYSPSSPAYSPT---GQGYSPS 1854
Query: 302 YSPSAGYSPTLPGYSPS 252
S YSPT P Y S
Sbjct: 1855 SPASPTYSPTSPSYEDS 1871
Score = 126 bits (316), Expect = 1e-27
Identities = 72/127 (56%), Positives = 83/127 (65%), Gaps = 8/127 (6%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNAR--LSPASP-YSPT 417
SP+SPG PS SP PS SPSY+P S Y+ A SP A SP SP YSPT
Sbjct: 1538 SPSSPG-----PSMSPYFPSSPSASPSYSPSSPNYA---AASPGGASPGYSPTSPSYSPT 1589
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS---- 249
SPNYSPTSP YSPTSP+YSP+SP YSP+SP S SP YSP+A Y+P+ P YSP+S
Sbjct: 1590 SPNYSPTSPRYSPTSPNYSPTSPNYSPTSPSYSPTSPLYSPTATYAPSSPAYSPTSPSYS 1649
Query: 248 -TGQYTP 231
T Y+P
Sbjct: 1650 PTSPYSP 1656
Score = 122 bits (306), Expect = 2e-26
Identities = 73/146 (50%), Positives = 87/146 (59%), Gaps = 27/146 (18%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPS---YGPTSPSYNPQSAKYSPSIA----------------- 468
S SP +SP S S PS Y P+SPS +P + SP+ A
Sbjct: 1526 SGMSPSWSPMPGSPSSPGPSMSPYFPSSPSASPSYSPSSPNYAAASPGGASPGYSPTSPS 1585
Query: 467 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSP------TYSPSSPYSSGAS 309
YSP++ SP SP YSPTSPNYSPTSP+YSPTSPSYSP+SP TY+PSSP S S
Sbjct: 1586 YSPTSPNYSPTSPRYSPTSPNYSPTSPNYSPTSPSYSPTSPLYSPTATYAPSSPAYSPTS 1645
Query: 308 PDYSPSAGYSPTLPGYSPSSTGQYTP 231
P YSP++ YSPT P YSP+S Y+P
Sbjct: 1646 PSYSPTSPYSPTSPSYSPTSPA-YSP 1670
Score = 106 bits (265), Expect = 1e-21
Identities = 67/138 (48%), Positives = 85/138 (61%), Gaps = 18/138 (13%)
Frame = -3
Query: 590 YSPTSP--GYSPTSPSYSPTSPSYGP-TSPSYNPQSAKYS---PSIA-YSPSNARLSPAS 432
+SP+ P G +P PS+SP++ S SPS++P S PS++ Y PS+ SP+
Sbjct: 1501 WSPSGPPSGMTPGGPSFSPSAQSDASGMSPSWSPMPGSPSSPGPSMSPYFPSSPSASPS- 1559
Query: 431 PYSPTSPNYSPTSPS-----YSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 270
YSP+SPNY+ SP YSPTSPSYSP+SP YSP+SP S SP+YSP S YSPT
Sbjct: 1560 -YSPSSPNYAAASPGGASPGYSPTSPSYSPTSPNYSPTSPRYSPTSPNYSPTSPNYSPTS 1618
Query: 269 PGYSPSS-----TGQYTP 231
P YSP+S T Y P
Sbjct: 1619 PSYSPTSPLYSPTATYAP 1636
Score = 68.6 bits (166), Expect = 4e-10
Identities = 56/137 (40%), Positives = 71/137 (51%), Gaps = 22/137 (16%)
Frame = -3
Query: 575 PGYSPT-SPSYSP----TSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
PG +P+ SP+ +P +P YG SPS P S ++SPS S S SP
Sbjct: 1477 PGATPSMSPAMTPWQQSQTPGYGEWSPS-GPPSGMTPGGPSFSPS-----AQSDASGMSP 1530
Query: 410 NYSPTSPSYSPTSP----------------SYSPSSPTYSPSSPYSSGASPDYSP-SAGY 282
++SP S P+SP SYSPSSP Y+ +SP GASP YSP S Y
Sbjct: 1531 SWSPMPGS--PSSPGPSMSPYFPSSPSASPSYSPSSPNYAAASP--GGASPGYSPTSPSY 1586
Query: 281 SPTLPGYSPSSTGQYTP 231
SPT P YSP+S +Y+P
Sbjct: 1587 SPTSPNYSPTSP-RYSP 1602
Score = 55.5 bits (132), Expect = 3e-06
Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 10/50 (20%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPT----------SPSYNPQSAKYSPSI 471
YSPTSP Y+PTSP YSP+SP+Y PT SP+Y+P S Y S+
Sbjct: 1823 YSPTSPVYTPTSPHYSPSSPAYSPTGQGYSPSSPASPTYSPTSPSYEDSV 1872
[93][TOP]
>UniRef100_C4R4Y0 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R4Y0_PICPG
Length = 1743
Score = 171 bits (432), Expect = 5e-41
Identities = 87/123 (70%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ + SP SP YSPT
Sbjct: 1581 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPT 1640
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1641 SPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP-Q 1699
Query: 239 YTP 231
Y+P
Sbjct: 1700 YSP 1702
Score = 170 bits (431), Expect = 7e-41
Identities = 87/123 (70%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1560 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1619
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1620 SPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP-Q 1678
Query: 239 YTP 231
Y+P
Sbjct: 1679 YSP 1681
Score = 169 bits (427), Expect = 2e-40
Identities = 86/123 (69%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSP Y+P S +YSP S YSP++ + SP SP YSPT
Sbjct: 1602 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1661
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1662 SPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP-Q 1720
Query: 239 YTP 231
Y+P
Sbjct: 1721 YSP 1723
Score = 167 bits (424), Expect = 4e-40
Identities = 84/123 (68%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
++PTSPG++PTSP YSPTSP Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1539 FAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1598
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1599 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP-Q 1657
Query: 239 YTP 231
Y+P
Sbjct: 1658 YSP 1660
Score = 160 bits (404), Expect = 9e-38
Identities = 81/122 (66%), Positives = 95/122 (77%), Gaps = 3/122 (2%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 414
S TSPG++PTSP ++PTSP Y PTSP Y+P S YSP S +YSP++ SP SP YSPTS
Sbjct: 1533 SATSPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1592
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQY 237
P+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S QY
Sbjct: 1593 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSP-QY 1651
Query: 236 TP 231
+P
Sbjct: 1652 SP 1653
Score = 158 bits (400), Expect = 3e-37
Identities = 81/123 (65%), Positives = 94/123 (76%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y PTSPG S TSP ++PTSP + PTSP Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1525 YQPTSPGLSATSPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPT 1584
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1585 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSP-Q 1643
Query: 239 YTP 231
Y+P
Sbjct: 1644 YSP 1646
Score = 152 bits (385), Expect = 1e-35
Identities = 79/129 (61%), Positives = 94/129 (72%), Gaps = 2/129 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSP Y PTSP Y+P S +YSP S YSP++ + SP SP YSPT
Sbjct: 1623 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1682
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP++ P YSPS ++
Sbjct: 1683 SPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPAS------PQYSPS---RH 1733
Query: 236 TPHEGDKKD 210
+P+ G+ K+
Sbjct: 1734 SPN-GESKE 1741
Score = 146 bits (368), Expect = 1e-33
Identities = 76/123 (61%), Positives = 88/123 (71%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+ Y PTSP S TSP + PTSP + P S +YSP S YSP++ SP SP YSPT
Sbjct: 1518 YAGIQSPYQPTSPGLSATSPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPT 1577
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Q
Sbjct: 1578 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP-Q 1636
Query: 239 YTP 231
Y+P
Sbjct: 1637 YSP 1639
Score = 72.8 bits (177), Expect = 2e-11
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 12/125 (9%)
Frame = -3
Query: 569 YSPTSPSYSPTSPSYGPTSPSYNPQ-----------SAKYSPSIAYSPSNARLSPASPYS 423
Y+PT P + + T N Q +SP + R + Y+
Sbjct: 1460 YAPTMPLFKGKATQGSATPYDNNAQYDDEFNHDDVADVMFSPMAETGSGDDRSGGLTEYA 1519
Query: 422 PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSST 246
Y PTSP S TSP ++P+SP ++P+SP S SP YSP S YSPT P YSP+S
Sbjct: 1520 GIQSPYQPTSPGLSATSPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSP 1579
Query: 245 GQYTP 231
Y+P
Sbjct: 1580 -SYSP 1583
[94][TOP]
>UniRef100_UPI0000E24648 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Pan troglodytes RepID=UPI0000E24648
Length = 1913
Score = 170 bits (431), Expect = 7e-41
Identities = 89/136 (65%), Positives = 99/136 (72%), Gaps = 16/136 (11%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1681
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP--------------SAGYS 279
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YS
Sbjct: 1682 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTSPSYS 1741
Query: 278 PTLPGYSPSSTGQYTP 231
PT P YSPSS +YTP
Sbjct: 1742 PTSPSYSPSSP-RYTP 1756
Score = 168 bits (425), Expect = 3e-40
Identities = 83/117 (70%), Positives = 94/117 (80%), Gaps = 3/117 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P SP YSPTSPSYSPTSPSY PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1608 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1667
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1668 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1724
Score = 165 bits (417), Expect = 3e-39
Identities = 87/131 (66%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSP--------GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP GY+P SPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP
Sbjct: 1593 YSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1652
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1653 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1712
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1713 YSPTSP-SYSP 1722
Score = 163 bits (413), Expect = 8e-39
Identities = 92/158 (58%), Positives = 105/158 (66%), Gaps = 16/158 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 416 S-------------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYS 279
S P+YSPTSPSYSP+SP Y+P SPTY+PSSP S +SP YSP S Y+
Sbjct: 1724 SQSYHPTVVDSSTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYT 1783
Query: 278 PTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 165
PT P YSPSS +YTP K T K + K +P
Sbjct: 1784 PTSPSYSPSSP-EYTP-TSPKYSPTSPKYSPTSPKYSP 1819
Score = 161 bits (407), Expect = 4e-38
Identities = 80/120 (66%), Positives = 92/120 (76%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPT
Sbjct: 1775 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 1834
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 1835 SPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1894
Score = 152 bits (384), Expect = 2e-35
Identities = 78/136 (57%), Positives = 94/136 (69%), Gaps = 9/136 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 1782 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 1841
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 1842 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 1898
Query: 257 PSSTGQYTPHEGDKKD 210
+S +P + D+++
Sbjct: 1899 LTSPA-ISPDDSDEEN 1913
Score = 150 bits (380), Expect = 6e-35
Identities = 83/143 (58%), Positives = 98/143 (68%), Gaps = 23/143 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI--------------AYSPSN 453
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S Y P++ +YSPS+
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTSPSYSPTSPSYSPSS 1751
Query: 452 ARLSPASP-YSPTSPNYSP-------TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 297
R +P SP Y+P+SP+YSP TSP Y+PTSPSYSPSSP Y+P+SP S SP YS
Sbjct: 1752 PRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 1811
Query: 296 P-SAGYSPTLPGYSPSSTGQYTP 231
P S YSPT P YSP +T +Y+P
Sbjct: 1812 PTSPKYSPTSPTYSP-TTPKYSP 1833
Score = 129 bits (325), Expect = 1e-28
Identities = 78/138 (56%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSP---------SIAYSP 459
SPGYSP SP S P+SP G SPSY+P S Y P S +YSP
Sbjct: 1558 SPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
Query: 458 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1618 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1678 YSPTSPSYSPTSP-SYSP 1694
Score = 121 bits (304), Expect = 4e-26
Identities = 73/126 (57%), Positives = 85/126 (67%), Gaps = 7/126 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPT-----SPSYGPTSPSYNPQS-AKYSPSIAYSPSNARLSPASPY 426
SP SPG P+SP Y P+ SPSY PTSP+Y P+S Y+P SPS Y
Sbjct: 1571 SPGSPG--PSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQ---SPS---------Y 1615
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SPTSP+YSPTSPSYSPTSP+YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1616 SPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1675
Query: 248 TGQYTP 231
Y+P
Sbjct: 1676 P-SYSP 1680
Score = 97.4 bits (241), Expect = 7e-19
Identities = 66/154 (42%), Positives = 84/154 (54%), Gaps = 38/154 (24%)
Frame = -3
Query: 578 SPGYSP----TSPSYSPTSPSYG----PTSPSYNPQSAK--------YSPSIAYSP-SNA 450
SP +P +P+Y SPS G P + ++P +A YSP+ + +P S
Sbjct: 1514 SPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPG 1573
Query: 449 RLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSS 330
P+SPY P+ SP+YSPT SPSYSPTSPSYSP+SP+YSP+S
Sbjct: 1574 SPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTS 1633
Query: 329 PYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1634 PNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
[95][TOP]
>UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U396_PHYPA
Length = 1742
Score = 169 bits (429), Expect = 1e-40
Identities = 87/130 (66%), Positives = 98/130 (75%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSPGYSPTSP YSPTSP Y PTSPSY+P S YSP S +YSP++ +P SP YSPT
Sbjct: 1564 YSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPT 1623
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP--------SAGYSPTLPGY 261
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P Y
Sbjct: 1624 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSY 1683
Query: 260 SPSSTGQYTP 231
SP+S G Y+P
Sbjct: 1684 SPTSPG-YSP 1692
Score = 169 bits (428), Expect = 2e-40
Identities = 85/117 (72%), Positives = 94/117 (80%), Gaps = 3/117 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S AYSP++ +P SP YSPT
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPT 1679
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SP+YSPTSP YSPTSPSYSPSSP+YSP+SP S SP YSP S YSP+ P YSP+S
Sbjct: 1680 SPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPSSPSYSPTS 1736
Score = 147 bits (370), Expect = 8e-34
Identities = 72/99 (72%), Positives = 80/99 (80%), Gaps = 2/99 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP+Y PTSPSY P S YSP S +YSP++ SP SP YSP+
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPS 1700
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 300
SP+YSPTSPSYSPTSP+YSP+SP YSPSSP S SP Y
Sbjct: 1701 SPSYSPTSPSYSPTSPAYSPTSPRYSPSSPSYSPTSPSY 1739
Score = 130 bits (327), Expect = 8e-29
Identities = 66/94 (70%), Positives = 74/94 (78%), Gaps = 5/94 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSPSY PTSP+Y+P S YSP S YSP++ SP+SP YSPT
Sbjct: 1648 YSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPT 1707
Query: 416 SPNYSPTSPSYSPTSPSYSPSSP---TYSPSSPY 324
SP+YSPTSP+YSPTSP YSPSSP SPS Y
Sbjct: 1708 SPSYSPTSPAYSPTSPRYSPSSPSYSPTSPSYRY 1741
Score = 107 bits (268), Expect = 5e-22
Identities = 58/107 (54%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
Frame = -3
Query: 548 YSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSP 369
+SP+SP Y P+SP Y+P LSP YSPTSP YSPTSP YSPTSP
Sbjct: 1536 FSPSSPGYSPSSPGYSP-----------------LSPG--YSPTSPGYSPTSPGYSPTSP 1576
Query: 368 SYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSP+SP YSP+SP S SP YSP S YSPT P Y+P+S Y+P
Sbjct: 1577 GYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSP-SYSP 1622
[96][TOP]
>UniRef100_UPI000179338A PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179338A
Length = 1862
Score = 169 bits (428), Expect = 2e-40
Identities = 91/151 (60%), Positives = 104/151 (68%), Gaps = 28/151 (18%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA----------------- 288
SP+YSPTSPSYSPTSPSYSP+SP+YSPSSP + +SP Y+PSA
Sbjct: 1709 SPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYTASSPSYTPSATSGASNYKYSPTSPSLA 1768
Query: 287 ---GYSPTLPGYSPS------STGQYTPHEG 222
YSPT P YSPS S+ Q+TP+ G
Sbjct: 1769 VSPTYSPTSPMYSPSNASYSPSSVQHTPNAG 1799
Score = 146 bits (369), Expect = 1e-33
Identities = 80/127 (62%), Positives = 93/127 (73%), Gaps = 7/127 (5%)
Frame = -3
Query: 590 YSPTSPGYSPT---SPSYSPTSPSYG--PTSPSYNPQSAKYSPSIAYSPSNARLSPASP- 429
YSPTSP YS T +P YS SP+Y PTSPSY+P S YS + +YSP++ SP SP
Sbjct: 1604 YSPTSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPTSPSYSHT-SYSPTSPSYSPTSPS 1662
Query: 428 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722
Query: 251 STGQYTP 231
S Y+P
Sbjct: 1723 SP-SYSP 1728
Score = 138 bits (348), Expect = 3e-31
Identities = 78/150 (52%), Positives = 87/150 (58%), Gaps = 28/150 (18%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------ 429
YSPTSP YSPTSPSYSPTSPSY P+SP Y S Y+PS SN + SP SP
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPSSPQYTASSPSYTPSATSGASNYKYSPTSPSLAVSP 1771
Query: 428 -YSPTSPNYSPTSPSYSPTS-------------PSYSPSSPTYSP-----SSPYSSGASP 306
YSPTSP YSP++ SYSP+S SYSPSSP YSP +SP S SP
Sbjct: 1772 TYSPTSPMYSPSNASYSPSSVQHTPNAGVTQYNQSYSPSSPVYSPTNFSLASPRYSPTSP 1831
Query: 305 DYSPSAG---YSPTLPGYSPSSTGQYTPHE 225
YSP G YSP+ P YSP+S P E
Sbjct: 1832 TYSPGVGSPNYSPSSPSYSPTSPNYSGPEE 1861
Score = 122 bits (306), Expect = 2e-26
Identities = 69/131 (52%), Positives = 86/131 (65%), Gaps = 12/131 (9%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYS-PTSPSYGPTSPS-----YNPQSAKYSPSIAYSPSNARLSPASPY 426
SP P + SP+Y+ P+SP +G SPS Y+P S +YS + +P + +SP Y
Sbjct: 1571 SPYVPSPNSMSPNYNYPSSPQFGSMSPSMTPTNYSPTSPQYSATQQNTPKYSSMSPNYNY 1630
Query: 425 SPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SPTSP+YSPTSP SYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1631 SPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1690
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1691 YSPTSP-SYSP 1700
[97][TOP]
>UniRef100_UPI000179348F PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179348F
Length = 1862
Score = 169 bits (427), Expect = 2e-40
Identities = 91/151 (60%), Positives = 104/151 (68%), Gaps = 28/151 (18%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1708
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA----------------- 288
SP+YSPTSPSYSPTSPSYSP+SP+YSPSSP + +SP Y+PSA
Sbjct: 1709 SPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPSYTPSATSGTSNYKYSPTSPSLA 1768
Query: 287 ---GYSPTLPGYSPS------STGQYTPHEG 222
YSPT P YSPS S+ Q+TP+ G
Sbjct: 1769 VSPTYSPTSPMYSPSNASYSPSSLQHTPNAG 1799
Score = 146 bits (369), Expect = 1e-33
Identities = 80/127 (62%), Positives = 93/127 (73%), Gaps = 7/127 (5%)
Frame = -3
Query: 590 YSPTSPGYSPT---SPSYSPTSPSYG--PTSPSYNPQSAKYSPSIAYSPSNARLSPASP- 429
YSPTSP YS T +P YS SP+Y PTSPSY+P S YS + +YSP++ SP SP
Sbjct: 1604 YSPTSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPTSPSYSHT-SYSPTSPSYSPTSPS 1662
Query: 428 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1722
Query: 251 STGQYTP 231
S Y+P
Sbjct: 1723 SP-SYSP 1728
Score = 137 bits (345), Expect = 6e-31
Identities = 78/150 (52%), Positives = 87/150 (58%), Gaps = 28/150 (18%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------ 429
YSPTSP YSPTSPSYSPTSPSY P+SP Y S Y+PS SN + SP SP
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPSYTPSATSGTSNYKYSPTSPSLAVSP 1771
Query: 428 -YSPTSPNYSPTSPSYSPTS-------------PSYSPSSPTYSP-----SSPYSSGASP 306
YSPTSP YSP++ SYSP+S SYSPSSP YSP +SP S SP
Sbjct: 1772 TYSPTSPMYSPSNASYSPSSLQHTPNAGGTQYNQSYSPSSPVYSPTNFSMASPRYSPTSP 1831
Query: 305 DYSPSAG---YSPTLPGYSPSSTGQYTPHE 225
YSP G YSP+ P YSP+S P E
Sbjct: 1832 TYSPGVGSPHYSPSSPSYSPTSPNYSGPDE 1861
Score = 123 bits (309), Expect = 9e-27
Identities = 70/131 (53%), Positives = 86/131 (65%), Gaps = 12/131 (9%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYS-PTSPSYGPTSPS-----YNPQSAKYSPSIAYSPSNARLSPASPY 426
SP P S SP+Y+ P+SP +G SPS Y+P S +YS + +P + +SP Y
Sbjct: 1571 SPYVPSPSSMSPNYNYPSSPQFGSLSPSMTPTNYSPTSPQYSATQQNTPKYSSMSPNYNY 1630
Query: 425 SPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
SPTSP+YSPTSP SYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1631 SPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1690
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1691 YSPTSP-SYSP 1700
Score = 114 bits (285), Expect = 6e-24
Identities = 76/160 (47%), Positives = 83/160 (51%), Gaps = 62/160 (38%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKY-----------------------S 480
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S +Y S
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPSYTPSATSGTSNYKYSPTS 1764
Query: 479 PSIA-----------YSPSNARLSPAS---------------------PYSPT-----SP 411
PS+A YSPSNA SP+S YSPT SP
Sbjct: 1765 PSLAVSPTYSPTSPMYSPSNASYSPSSLQHTPNAGGTQYNQSYSPSSPVYSPTNFSMASP 1824
Query: 410 NYSPTSPSYSP--TSPSYSPSSPTYSPSSPYSSGASPDYS 297
YSPTSP+YSP SP YSPSSP+YSP+SP SG PD S
Sbjct: 1825 RYSPTSPTYSPGVGSPHYSPSSPSYSPTSPNYSG--PDES 1862
Score = 77.4 bits (189), Expect = 8e-13
Identities = 70/194 (36%), Positives = 82/194 (42%), Gaps = 85/194 (43%)
Frame = -3
Query: 557 SPSYSP--------TSPSY---------------GP------------TSP--------- 510
+PS SP ++P Y GP TSP
Sbjct: 1501 TPSMSPAMTPWDQTSTPMYQNNWSSSLETGMTPGGPGFSPAGSSEASGTSPFWMSSGGTP 1560
Query: 509 -----------SYNPQSAKYSPSIAY--SPSNARLSPA---SPYSPTSP----------- 411
Y P + SP+ Y SP LSP+ + YSPTSP
Sbjct: 1561 GSPGSPGMATSPYVPSPSSMSPNYNYPSSPQFGSLSPSMTPTNYSPTSPQYSATQQNTPK 1620
Query: 410 --------NYSPTSPSYSPTSP-----SYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPT 273
NYSPTSPSYSPTSP SYSP+SP+YSP+SP S SP YSP S YSPT
Sbjct: 1621 YSSMSPNYNYSPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680
Query: 272 LPGYSPSSTGQYTP 231
P YSP+S Y+P
Sbjct: 1681 SPSYSPTSP-SYSP 1693
[98][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
discoideum RepID=RPB1_DICDI
Length = 1727
Score = 168 bits (425), Expect = 3e-40
Identities = 86/123 (69%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y P SP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1546 YFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPT 1605
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1606 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1664
Query: 239 YTP 231
Y+P
Sbjct: 1665 YSP 1667
Score = 164 bits (415), Expect = 5e-39
Identities = 85/128 (66%), Positives = 95/128 (74%), Gaps = 2/128 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1609 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1668
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SP+YSPTSPSYSPTSPSYSPSSP+YSPSSP S +SP YSPS SP+ T +Y
Sbjct: 1669 SPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPSYSPS----------SPTFTNKY 1718
Query: 236 TPHEGDKK 213
+KK
Sbjct: 1719 NYQPNNKK 1726
Score = 161 bits (408), Expect = 3e-38
Identities = 88/130 (67%), Positives = 98/130 (75%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSP Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1581 YSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1640
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS---SGASPDYSPSA-GYSPTLPGY 261
SP+YSPTSPSYSPTSPSYSP+SP+YSP SP S S SP YSPS+ YSP+ P Y
Sbjct: 1641 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSY 1700
Query: 260 SPSSTGQYTP 231
SPSS Y+P
Sbjct: 1701 SPSSP-SYSP 1709
Score = 115 bits (288), Expect = 3e-24
Identities = 65/126 (51%), Positives = 79/126 (62%), Gaps = 9/126 (7%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSPSY-------GPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-Y 426
T+P ++P SP + ++ SP YN + Y S Y P + SP SP Y
Sbjct: 1502 TTPFHNPYDAPLSPFNETFRGDFSPSAMNSPGYNANKS-YGSSYQYFPQSPTYSPTSPSY 1560
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1561 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTS 1620
Query: 248 TGQYTP 231
Y+P
Sbjct: 1621 P-SYSP 1625
Score = 110 bits (274), Expect = 1e-22
Identities = 71/141 (50%), Positives = 84/141 (59%), Gaps = 23/141 (16%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPT-SPSYGPTSPSYNPQSAK-----------YSPSIAYSPS-NARL 444
P++ Y T S +P+ S G T+P +NP A +SPS SP NA
Sbjct: 1479 PSNVSYPDTPGSQTPSYSYGDGSTTPFHNPYDAPLSPFNETFRGDFSPSAMNSPGYNANK 1538
Query: 443 S--------PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 294
S P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1539 SYGSSYQYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1598
Query: 293 SAGYSPTLPGYSPSSTGQYTP 231
S YSPT P YSP+S Y+P
Sbjct: 1599 SPFYSPTSPSYSPTSP-SYSP 1618
[99][TOP]
>UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1EA31_9CHLO
Length = 1720
Score = 167 bits (422), Expect = 7e-40
Identities = 83/119 (69%), Positives = 94/119 (78%), Gaps = 3/119 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 1576 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1635
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
SP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P YSP+S G
Sbjct: 1636 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSLG 1694
Score = 147 bits (370), Expect = 8e-34
Identities = 78/120 (65%), Positives = 88/120 (73%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 1597 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1656
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
SP YSPTSP YSPTSP YSP+SP YSP SP S G S +P+ SPT P YSPS+
Sbjct: 1657 SPAYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSLGLSDADAPTR--SPTSPQYSPST 1714
Score = 135 bits (339), Expect = 3e-30
Identities = 76/124 (61%), Positives = 86/124 (69%), Gaps = 8/124 (6%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSP 399
SPGYSPTSP+YSPTSP+Y PTSP+Y+P S YSP+ SPA YSPTSP YSP
Sbjct: 1524 SPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT----------SPA--YSPTSPAYSP 1571
Query: 398 TSPSYSPTSPSYSPSSPTYSP----SSPYS---SGASPDYSP-SAGYSPTLPGYSPSSTG 243
TSP+YSPTSP+YSP+SP YSP SP S S SP YSP S YSPT P YSP+S
Sbjct: 1572 TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA 1631
Query: 242 QYTP 231
Y+P
Sbjct: 1632 -YSP 1634
Score = 102 bits (253), Expect = 3e-20
Identities = 63/114 (55%), Positives = 74/114 (64%), Gaps = 5/114 (4%)
Frame = -3
Query: 557 SPSY--SPTSP-SYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPNYSPTSP 390
SPS+ SPT+ S S ++PQ Y S A + SP SP YSPTSP YSPTSP
Sbjct: 1488 SPSFLLSPTAHMSPFDDSMRFSPQGTDYG-SHAGGGQSPGYSPTSPAYSPTSPAYSPTSP 1546
Query: 389 SYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1547 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1599
[100][TOP]
>UniRef100_C5LSN8 P35 antigen, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC
50983 RepID=C5LSN8_9ALVE
Length = 170
Score = 166 bits (420), Expect = 1e-39
Identities = 84/123 (68%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 1 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 60
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 61 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPTSPA- 119
Query: 239 YTP 231
Y+P
Sbjct: 120 YSP 122
Score = 161 bits (407), Expect = 4e-38
Identities = 81/122 (66%), Positives = 91/122 (74%), Gaps = 2/122 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 29 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 88
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SP YSPTSP+YSPTSPSYSP+SP YSP+SP S SP YSPT P YSP+S Y
Sbjct: 89 SPAYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSPTSP------AYSPTSPAYSPTSPAYY 142
Query: 236 TP 231
P
Sbjct: 143 HP 144
Score = 142 bits (359), Expect = 2e-32
Identities = 73/116 (62%), Positives = 84/116 (72%), Gaps = 2/116 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 57 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPT 116
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
SP YSPTSP+YSPTSP+YSP+SP Y + S D P YSPT P YS +S
Sbjct: 117 SPAYSPTSPAYSPTSPAYSPTSPAYY----HPLVTSSDEGPVVRYSPTSPAYSNTS 168
Score = 124 bits (312), Expect = 4e-27
Identities = 64/106 (60%), Positives = 75/106 (70%), Gaps = 18/106 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 64 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSPT 123
Query: 416 SPNYSPTSPSYSPTSPSY----------------SPSSPTYSPSSP 327
SP YSPTSP+YSPTSP+Y SP+SP YS +SP
Sbjct: 124 SPAYSPTSPAYSPTSPAYYHPLVTSSDEGPVVRYSPTSPAYSNTSP 169
Score = 115 bits (287), Expect = 3e-24
Identities = 60/100 (60%), Positives = 70/100 (70%), Gaps = 18/100 (18%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 71 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPT 130
Query: 416 SPNYSPTSPSY----------------SPTSPSYSPSSPT 345
SP YSPTSP+Y SPTSP+YS +SP+
Sbjct: 131 SPAYSPTSPAYYHPLVTSSDEGPVVRYSPTSPAYSNTSPS 170
[101][TOP]
>UniRef100_B6AG69 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AG69_9CRYT
Length = 1927
Score = 165 bits (418), Expect = 2e-39
Identities = 85/123 (69%), Positives = 94/123 (76%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSP Y PTSP Y+P S YSP S YSP++ SP SP YSPT
Sbjct: 1720 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPT 1779
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
SPNYSPTSP YSPTSP+YSPSSP YSP+SP + ASP+YSPS+ Y+P P YSPSS Q
Sbjct: 1780 SPNYSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYSPSSPHYNPASPNYSPSSP-Q 1838
Query: 239 YTP 231
Y P
Sbjct: 1839 YNP 1841
Score = 156 bits (395), Expect = 1e-36
Identities = 80/145 (55%), Positives = 102/145 (70%), Gaps = 3/145 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP Y PTSP+Y+P S YSP S YSP++ SP SP YSP+
Sbjct: 1741 YSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPS 1800
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSY+P SP+YSPSSP Y+P+SP S +SP Y+P+ YSP+ P Y+P+S
Sbjct: 1801 SPHYSPTSPSYNPASPNYSPSSPHYNPASPNYSPSSPQYNPALPNYSPSSPQYNPTSP-N 1859
Query: 239 YTPHEGDKKDKTGKKDASKDDKGNP 165
Y+P + G D+ + +P
Sbjct: 1860 YSPSSPNYVLSNGNIDSPQYSPSSP 1884
Score = 135 bits (341), Expect = 2e-30
Identities = 83/178 (46%), Positives = 97/178 (54%), Gaps = 58/178 (32%)
Frame = -3
Query: 590 YSPTSPGY----------------------------SPT--------------------- 558
Y+PTSP Y SPT
Sbjct: 1630 YTPTSPIYAVRSPAYGHETEERTKKRYKANIATSAYSPTSPVYSGDKDGDSSSPFMSPTS 1689
Query: 557 ------SPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTSPNYS 402
SP+YSPTSP+Y PTSP+Y+P S YSP S YSP++ SP SP YSPTSP+YS
Sbjct: 1690 PGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYS 1749
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
PTSP+YSPTSP YSP+SP YSP+SP+ S SP+YSP S YSPT P YSPSS Y+P
Sbjct: 1750 PTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSP-HYSP 1806
Score = 126 bits (317), Expect = 1e-27
Identities = 74/144 (51%), Positives = 88/144 (61%), Gaps = 25/144 (17%)
Frame = -3
Query: 587 SPTSP--GYSPTSPSYSPTSPSYG---------------------PTSPSYNPQSAKYSP 477
SPTSP Y+PTSP Y+ SP+YG PTSP Y+ S
Sbjct: 1622 SPTSPLIDYTPTSPIYAVRSPAYGHETEERTKKRYKANIATSAYSPTSPVYSGDKDGDSS 1681
Query: 476 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 300
S SP++ + P SP YSPTSPNYSPTSP+YSPTSP+YSP+SP YSP+SP+ S SP Y
Sbjct: 1682 SPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHY 1741
Query: 299 SP-SAGYSPTLPGYSPSSTGQYTP 231
SP S YSPT P YSP+S Y+P
Sbjct: 1742 SPTSPHYSPTSPNYSPTSP-HYSP 1764
Score = 104 bits (259), Expect = 6e-21
Identities = 52/115 (45%), Positives = 77/115 (66%), Gaps = 14/115 (12%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
YSPTSP Y+P SP+YSP+SP Y P SP+Y+P S +Y+P++ YSPS+ + +P SP YSP+
Sbjct: 1804 YSPTSPSYNPASPNYSPSSPHYNPASPNYSPSSPQYNPALPNYSPSSPQYNPTSPNYSPS 1863
Query: 416 SPNY------------SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA 288
SPNY SP+SP Y + +Y P+SP+Y+ ++ + A +YSP++
Sbjct: 1864 SPNYVLSNGNIDSPQYSPSSPHYDQSVAAYHPTSPSYTSTNMAAEEA--EYSPTS 1916
Score = 72.0 bits (175), Expect = 3e-11
Identities = 62/159 (38%), Positives = 74/159 (46%), Gaps = 40/159 (25%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNP-QSAKYSPSIAYSPSNARLSPA--SPYSPT 417
SP SP SP SP YS P S ++P Q SP SPS LSP SP SPT
Sbjct: 1567 SPMSP-LSPMSPLYSTHEPMSPMISGQFSPVQMTPRSPMSPVSPSGI-LSPMPYSPASPT 1624
Query: 416 SP--NYSPTSPSYSPTSPSYSP--------------SSPTYSPSSPYSSG---------- 315
SP +Y+PTSP Y+ SP+Y ++ YSP+SP SG
Sbjct: 1625 SPLIDYTPTSPIYAVRSPAYGHETEERTKKRYKANIATSAYSPTSPVYSGDKDGDSSSPF 1684
Query: 314 ----------ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP+YSP S YSPT P YSP+S Y+P
Sbjct: 1685 MSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSP-NYSP 1722
Score = 58.5 bits (140), Expect = 4e-07
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 12/72 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSY------------GPTSPSYNPQSAKYSPSIAYSPSNAR 447
YSP+SP Y+PTSP+YSP+SP+Y P+SP Y+ A Y P+ S
Sbjct: 1846 YSPSSPQYNPTSPNYSPSSPNYVLSNGNIDSPQYSPSSPHYDQSVAAYHPTSPSYTSTNM 1905
Query: 446 LSPASPYSPTSP 411
+ + YSPTSP
Sbjct: 1906 AAEEAEYSPTSP 1917
[102][TOP]
>UniRef100_UPI000186D846 predicted protein n=1 Tax=Pediculus humanus corporis
RepID=UPI000186D846
Length = 1885
Score = 164 bits (415), Expect = 5e-39
Identities = 92/142 (64%), Positives = 101/142 (71%), Gaps = 22/142 (15%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSP---------YS----SGASPDYSP-SAGYS 279
SP+YS TSPSYSPTSPSYSPSSP Y+P+SP YS S ASP YSP S YS
Sbjct: 1696 SPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPTSPSLYSSPRYSPASPSYSPGSPKYS 1755
Query: 278 PTLPGYSPSS------TGQYTP 231
PT P YSP+S + QYTP
Sbjct: 1756 PTSPSYSPTSPSYASVSPQYTP 1777
Score = 161 bits (407), Expect = 4e-38
Identities = 81/123 (65%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP+SP ++PTSPS +PTS +Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1566 YSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPT 1625
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1626 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1684
Query: 239 YTP 231
Y+P
Sbjct: 1685 YSP 1687
Score = 160 bits (404), Expect = 9e-38
Identities = 80/123 (65%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
++PTSP +PTS +YSPTSPSY P+SP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1573 FAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1633 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1691
Query: 239 YTP 231
Y+P
Sbjct: 1692 YSP 1694
Score = 155 bits (391), Expect = 3e-36
Identities = 85/148 (57%), Positives = 98/148 (66%), Gaps = 16/148 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+ S YSP S +YSPS+ +PASP +SPT
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPT 1730
Query: 416 SPN------YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP--------SAGYS 279
SP+ YSP SPSYSP SP YSP+SP+YSP+SP + SP Y+P S YS
Sbjct: 1731 SPSLYSSPRYSPASPSYSPGSPKYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSPTYS 1790
Query: 278 PTLPGYSPSSTGQYTPHEGDKKDKTGKK 195
PT P YSPSS +TP + T K
Sbjct: 1791 PTSPSYSPSSP-SHTPGASTRYSPTSPK 1817
Score = 149 bits (376), Expect = 2e-34
Identities = 82/132 (62%), Positives = 96/132 (72%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPG-----YSPT-----SPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLS 441
SP+SPG Y P+ SPSYSP+SP++ PTSPS P S+ YSP S +YSPS+ S
Sbjct: 1543 SPSSPGPSNSPYVPSPGGGMSPSYSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPNYS 1602
Query: 440 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1603 PNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1662
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1663 SYSPTSP-SYSP 1673
Score = 147 bits (372), Expect = 5e-34
Identities = 86/158 (54%), Positives = 99/158 (62%), Gaps = 38/158 (24%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP--------------SIAYSPSN 453
YSPTSP YSPTSPSYS TSPSY PTSPSY+P S Y+P S YSP++
Sbjct: 1685 YSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPTSPSLYSSPRYSPAS 1744
Query: 452 ARLSPASP-YSPTSPNYSPTSPSY--------------SPTSPSYSPSSPTYSPSSP-YS 321
SP SP YSPTSP+YSPTSPSY SPTSP+YSP+SP+YSPSSP ++
Sbjct: 1745 PSYSPGSPKYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPSHT 1804
Query: 320 SGASPDYSP--------SAGYSPTLPGYSPSSTGQYTP 231
GAS YSP S YSP P YSPSS+ +Y+P
Sbjct: 1805 PGASTRYSPTSPKYSPTSLSYSPASPQYSPSSS-KYSP 1841
Score = 145 bits (365), Expect = 3e-33
Identities = 79/133 (59%), Positives = 88/133 (66%), Gaps = 19/133 (14%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSP SP YSPTSPSYSPTSPSY SP Y P S +YSP S YSP++ SP+SP
Sbjct: 1747 YSPGSPKYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPG 1806
Query: 428 ----YSPTSPNYSPTSPSYSPTSPSYSPS-------SPTYSPSSPYSSGASPDYSPSA-- 288
YSPTSP YSPTS SYSP SP YSPS SPTY+P+SP S +SP YSP+
Sbjct: 1807 ASTRYSPTSPKYSPTSLSYSPASPQYSPSSSKYSPTSPTYTPTSPDYSASSPTYSPTGPP 1866
Query: 287 GYSPTLPGYSPSS 249
YSPT P YSP+S
Sbjct: 1867 SYSPTSPTYSPTS 1879
Score = 128 bits (321), Expect = 4e-28
Identities = 65/108 (60%), Positives = 82/108 (75%), Gaps = 11/108 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPS--------YNPQSAKYSP-SIAYSPSNARLSP 438
Y+PTSP YSPTSP+YSPTSPSY P+SPS Y+P S KYSP S++YSP++ + SP
Sbjct: 1775 YTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPGASTRYSPTSPKYSPTSLSYSPASPQYSP 1834
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-TYSPSSPYSSGASPDY 300
+S YSPTSP Y+PTSP YS +SP+YSP+ P +YSP+SP S SP+Y
Sbjct: 1835 SSSKYSPTSPTYTPTSPDYSASSPTYSPTGPPSYSPTSPTYSPTSPEY 1882
Score = 72.0 bits (175), Expect = 3e-11
Identities = 49/117 (41%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Frame = -3
Query: 572 GYSPTSPSYSPTSPSYGP-TSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPT 396
G +P PS+SP+ S SP Y+P S + P SP SP P+ SP
Sbjct: 1511 GMTPGGPSFSPSGSSDASGLSPGYSPWSPQ---------------PGSPSSP-GPSNSPY 1554
Query: 395 SPSYSP-TSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
PS SPSYSPSSP ++P+SP + S +YSP S YSP+ P YSP+S Y+P
Sbjct: 1555 VPSPGGGMSPSYSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSP-SYSP 1610
[103][TOP]
>UniRef100_A8PU11 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PU11_BRUMA
Length = 1943
Score = 163 bits (412), Expect = 1e-38
Identities = 85/123 (69%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S YSPS+ R SP SP YSPT
Sbjct: 1767 YSPTSPAYSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPTSPTYSPT 1826
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSP+SP YSP+SP YSPSSP Y+PSSP + ASP YSP S YSP+ P YSPSS Q
Sbjct: 1827 SPAYSPSSPQYSPSSPQYSPSSPQYTPSSP-AGDASPAYSPTSPQYSPSSPRYSPSSP-Q 1884
Query: 239 YTP 231
Y+P
Sbjct: 1885 YSP 1887
Score = 160 bits (406), Expect = 5e-38
Identities = 84/123 (68%), Positives = 92/123 (74%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y SP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1683 YGVMSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPT 1742
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSP SP YSPSSP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1743 SPSYSPTSPSYSPASPGYSPSSPRYSPTSPAYSPTSPTYSPTSPAYSPTSPTYSPTSP-S 1801
Query: 239 YTP 231
Y+P
Sbjct: 1802 YSP 1804
Score = 160 bits (404), Expect = 9e-38
Identities = 80/122 (65%), Positives = 95/122 (77%), Gaps = 2/122 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP+SP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S +YSP++ SP+SP YSPT
Sbjct: 1760 YSPSSPRYSPTSPAYSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPT 1819
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SP YSPTSP+YSP+SP YSPSSP YSPSSP + +SP S YSPT P YSPSS +Y
Sbjct: 1820 SPTYSPTSPAYSPSSPQYSPSSPQYSPSSPQYTPSSPAGDASPAYSPTSPQYSPSSP-RY 1878
Query: 236 TP 231
+P
Sbjct: 1879 SP 1880
Score = 157 bits (397), Expect = 6e-37
Identities = 86/130 (66%), Positives = 94/130 (72%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S YSP++ SP SP YSPT
Sbjct: 1690 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPT 1749
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS---SGASPDYSP-SAGYSPTLPGY 261
SP+YSP SP YSP+SP YSP+SP YSP SP S S SP YSP S YSP PGY
Sbjct: 1750 SPSYSPASPGYSPSSPRYSPTSPAYSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGY 1809
Query: 260 SPSSTGQYTP 231
SPSS +Y+P
Sbjct: 1810 SPSSP-RYSP 1818
Score = 156 bits (394), Expect = 1e-36
Identities = 82/123 (66%), Positives = 91/123 (73%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y +SP Y SP YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 1676 YGASSPAYGVMSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPT 1735
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP YSPSSP S SP YSP S YSPT P YSP+S
Sbjct: 1736 SPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTSPAYSPTSPTYSPTSPAYSPTSP-T 1794
Query: 239 YTP 231
Y+P
Sbjct: 1795 YSP 1797
Score = 155 bits (392), Expect = 2e-36
Identities = 82/141 (58%), Positives = 99/141 (70%), Gaps = 21/141 (14%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP----- 429
YSP SPGYSP+SP YSPTSP+Y PTSP+Y+P S +YSPS YSPS+ + +P+SP
Sbjct: 1802 YSPASPGYSPSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPSSPQYTPSSPAGDAS 1861
Query: 428 --YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG------------ASPDYSPS 291
YSPTSP YSP+SP YSP+SP YSP+SP YSPSSP +G +SP YSPS
Sbjct: 1862 PAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTSYSRSSPQYSPSSPQYSPS 1921
Query: 290 AG-YSPTLPGYSPSSTGQYTP 231
+ YSP+ P YSPSS QY+P
Sbjct: 1922 SPQYSPSSPQYSPSSP-QYSP 1941
Score = 147 bits (372), Expect = 5e-34
Identities = 78/122 (63%), Positives = 93/122 (76%), Gaps = 5/122 (4%)
Frame = -3
Query: 581 TSPGYSPTSPS--YSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 414
+SPGYSPTSP+ Y +SP+YG SP Y+P S YSP S +YSP++ SP SP YSPTS
Sbjct: 1663 SSPGYSPTSPASPYGASSPAYGVMSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1722
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQY 237
P+YSPTSP YSPTSPSYSP+SP+YSP+SP S ASP YSPS+ YSPT P YSP+S Y
Sbjct: 1723 PSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTSPAYSPTSP-TY 1781
Query: 236 TP 231
+P
Sbjct: 1782 SP 1783
Score = 146 bits (369), Expect = 1e-33
Identities = 84/148 (56%), Positives = 100/148 (67%), Gaps = 28/148 (18%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYS--------------PTSPSYGPTSPSYNPQSAKYSPSI-AYSPS 456
YSPTSP YSPTSPSYS PTSP+Y PTSP+Y+P S +YSPS YSPS
Sbjct: 1788 YSPTSPTYSPTSPSYSPASPGYSPSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPS 1847
Query: 455 NARLSPASP-------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-----A 312
+ + +P+SP YSPTSP YSP+SP YSP+SP YSP+SP YSPSSP +G +
Sbjct: 1848 SPQYTPSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTSYSRS 1907
Query: 311 SPDYSPSA-GYSPTLPGYSPSSTGQYTP 231
SP YSPS+ YSP+ P YSPSS QY+P
Sbjct: 1908 SPQYSPSSPQYSPSSPQYSPSSP-QYSP 1934
Score = 139 bits (350), Expect = 2e-31
Identities = 76/130 (58%), Positives = 92/130 (70%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSP-----TSPSYSPTSPS--YGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA 435
YSP + Y +SP YSPTSP+ YG +SP+Y S +YSP S +YSP++ SP
Sbjct: 1648 YSPAASDYGSGLEGLSSPGYSPTSPASPYGASSPAYGVMSPRYSPTSPSYSPTSPSYSPT 1707
Query: 434 SP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP S GYSP+ P Y
Sbjct: 1708 SPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRY 1767
Query: 260 SPSSTGQYTP 231
SP+S Y+P
Sbjct: 1768 SPTSPA-YSP 1776
Score = 111 bits (277), Expect = 5e-23
Identities = 57/89 (64%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSP 399
SP YSPTSP YSP+SP Y P+SP Y+P S +YSPS SP A S YS +SP YSP
Sbjct: 1861 SPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPS---SPGGAGTS----YSRSSPQYSP 1913
Query: 398 TSPSYSPTSPSYSPSSPTYSPSSP-YSSG 315
+SP YSP+SP YSPSSP YSPSSP YS G
Sbjct: 1914 SSPQYSPSSPQYSPSSPQYSPSSPQYSPG 1942
Score = 74.3 bits (181), Expect = 7e-12
Identities = 60/156 (38%), Positives = 72/156 (46%), Gaps = 37/156 (23%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSP----TSPSYGP-----TSPSYNPQSAKYSPSI----AYSP--SN 453
S SP S SP+ +P T+P+YG T P A +SPS +SP
Sbjct: 1566 SSMSPASSAMSPAQTPWNAGTTPAYGAAWSPATGSGMTPGGAGFSPSGHSEGGFSPYGGG 1625
Query: 452 ARLSPASP--------------YSPTSPNYSP-----TSPSYSPTSPS--YSPSSPTYSP 336
SP SP YSP + +Y +SP YSPTSP+ Y SSP Y
Sbjct: 1626 GSWSPGSPGGSLGGMSPSGAGAYSPAASDYGSGLEGLSSPGYSPTSPASPYGASSPAYGV 1685
Query: 335 SSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1686 MSPRYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1720
[104][TOP]
>UniRef100_Q58EF0 Polr2a protein (Fragment) n=2 Tax=Danio rerio RepID=Q58EF0_DANRE
Length = 161
Score = 162 bits (411), Expect = 1e-38
Identities = 82/126 (65%), Positives = 96/126 (76%), Gaps = 6/126 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPT
Sbjct: 25 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 84
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP+Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 85 SPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 144
Query: 248 TGQYTP 231
Y+P
Sbjct: 145 P-TYSP 149
Score = 160 bits (405), Expect = 7e-38
Identities = 78/117 (66%), Positives = 93/117 (79%), Gaps = 3/117 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P+SP YSP+SPSYSPTSP Y PTSPSY+P S +Y+P S YSP++ + SP SP YSPT
Sbjct: 11 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 70
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SP YSPT+P YSPTSP+YSP+SPTY+P+SP S SP YSP S YSPT P YSP+S
Sbjct: 71 SPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 127
Score = 156 bits (395), Expect = 1e-36
Identities = 78/123 (63%), Positives = 93/123 (75%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP-YSPT 417
Y+P SP Y+P+SPSYSP+SPSY PTSP Y P S YSPS Y+P++ + SP SP YSPT
Sbjct: 4 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 63
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP S YSPT P YSP+S
Sbjct: 64 SPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSP-T 122
Query: 239 YTP 231
Y+P
Sbjct: 123 YSP 125
Score = 156 bits (395), Expect = 1e-36
Identities = 80/133 (60%), Positives = 96/133 (72%), Gaps = 6/133 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP YSPT
Sbjct: 32 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 91
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP---DYSP-SAGYSPTLPGYSPSS 249
SP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP YSP S GYSPT P YSP+
Sbjct: 92 SPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSPA- 150
Query: 248 TGQYTPHEGDKKD 210
+P + D+++
Sbjct: 151 ---ISPDDSDEEN 160
Score = 147 bits (370), Expect = 8e-34
Identities = 73/118 (61%), Positives = 91/118 (77%), Gaps = 3/118 (2%)
Frame = -3
Query: 575 PGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTSPNYS 402
P Y+P SP+Y+P+SPSY P+SPSY+P S KY+P S +YSPS+ +P SP YSPTSP YS
Sbjct: 2 PRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 61
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
PTSP YSPTSP+YSP++P YSP+SP S SP Y+P S YSPT P YSP+S +Y+P
Sbjct: 62 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSP-KYSP 118
[105][TOP]
>UniRef100_Q6ZJR1 DNA-directed RNA polymerase largest chain-like protein n=1
Tax=Oryza sativa Japonica Group RepID=Q6ZJR1_ORYSJ
Length = 138
Score = 162 bits (411), Expect = 1e-38
Identities = 83/125 (66%), Positives = 93/125 (74%), Gaps = 10/125 (8%)
Frame = -3
Query: 542 PTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSY 363
PTSP+Y PTSPSYNP SAKYSPS AYSPS+ RL SPYS TSPNYSPTSP+YSPTSPSY
Sbjct: 17 PTSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRL---SPYSQTSPNYSPTSPTYSPTSPSY 73
Query: 362 SPSSPTYSPSSPYS---------SGASPDYSPSAGYSPTLPGYSPSSTG-QYTPHEGDKK 213
S SP+YSP+SPY+ S SP+YSPS YSPT PGYSPSSTG Q++P DK
Sbjct: 74 SQPSPSYSPTSPYTTSGGPSPDYSPTSPNYSPSGSYSPTAPGYSPSSTGQQFSPQAADKD 133
Query: 212 DKTGK 198
+ K
Sbjct: 134 KEKAK 138
Score = 99.8 bits (247), Expect = 1e-19
Identities = 52/83 (62%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Frame = -3
Query: 590 YSPTSPGYSP---TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSP 420
YSP+SP SP TSP+YSPTSP+Y PTSPSY+ S YSP+ Y+ S P+ YSP
Sbjct: 42 YSPSSPRLSPYSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSG---GPSPDYSP 98
Query: 419 TSPNYSPTSPSYSPTSPSYSPSS 351
TSPNYSP S SYSPT+P YSPSS
Sbjct: 99 TSPNYSP-SGSYSPTAPGYSPSS 120
Score = 70.9 bits (172), Expect = 7e-11
Identities = 39/73 (53%), Positives = 44/73 (60%), Gaps = 9/73 (12%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSP---------SYNPQSAKYSPSIAYSPSNARLSP 438
YSPTSP YSPTSPSYS SPSY PTSP Y+P S YSPS +YSP+ SP
Sbjct: 59 YSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSPNYSPSGSYSPTAPGYSP 118
Query: 437 ASPYSPTSPNYSP 399
+S T +SP
Sbjct: 119 SS----TGQQFSP 127
[106][TOP]
>UniRef100_Q4QZ03 DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum tuberosum
RepID=Q4QZ03_SOLTU
Length = 361
Score = 162 bits (411), Expect = 1e-38
Identities = 75/86 (87%), Positives = 83/86 (96%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSPGYSPTSPSYSPTSPSY PTSPSYNP SA+YSPS+AYSP++ +LSP+SPYSP+SP
Sbjct: 277 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNP-SARYSPSLAYSPTSPKLSPSSPYSPSSP 335
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPS 333
+YSPTSPSYSPTSPSYSPSSPTYSPS
Sbjct: 336 SYSPTSPSYSPTSPSYSPSSPTYSPS 361
Score = 162 bits (410), Expect = 2e-38
Identities = 83/130 (63%), Positives = 94/130 (72%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSPGYSPTSP YSPTSP Y PTSP+Y+P S YSP S AYSP++ SP SP
Sbjct: 137 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPT 196
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGY 261
YSPTSP+YSPTSP YSPTSP+YSP+SP YSP+SP S P YSP+ YSPT P Y
Sbjct: 197 SSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSY 256
Query: 260 SPSSTGQYTP 231
SP+S Y+P
Sbjct: 257 SPTSP-SYSP 265
Score = 162 bits (409), Expect = 2e-38
Identities = 81/116 (69%), Positives = 90/116 (77%), Gaps = 3/116 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP+SPGYSP+SP YSPTSP Y PTSP Y+P S YSP S YSPS+ SP SP YSPT
Sbjct: 123 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 182
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
SP+YSPTSPSYSPTS SYSP+SP+YSP+SP S SP YSP S YSPT P YSP+
Sbjct: 183 SPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPTSPAYSPT 238
Score = 159 bits (402), Expect = 2e-37
Identities = 77/116 (66%), Positives = 94/116 (81%), Gaps = 2/116 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P YSP++ +YSP++ SP SP YSPT
Sbjct: 207 YSPTSPIYSPTSPAYSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPT 266
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
SP+YSPT P+YSPTSP YSP+SP+YSP+SP S SP Y+PSA YSP+L YSP+S
Sbjct: 267 SPSYSPTFPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSL-AYSPTS 321
Score = 157 bits (396), Expect = 8e-37
Identities = 88/135 (65%), Positives = 95/135 (70%), Gaps = 15/135 (11%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPT PSYSPT PSY PTSPSY+P S YSP S +YSP+ SP SP YSPT
Sbjct: 228 YSPTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPT 287
Query: 416 SPNYSPTSPSYSPTSPSYSPS------------SPTYSPSSPYSSGASPDYSP-SAGYSP 276
SP+YSPTSPSYSPTSPSY+PS SP SPSSPYS +SP YSP S YSP
Sbjct: 288 SPSYSPTSPSYSPTSPSYNPSARYSPSLAYSPTSPKLSPSSPYSP-SSPSYSPTSPSYSP 346
Query: 275 TLPGYSPSSTGQYTP 231
T P YSPSS Y+P
Sbjct: 347 TSPSYSPSSP-TYSP 360
Score = 155 bits (393), Expect = 2e-36
Identities = 82/124 (66%), Positives = 94/124 (75%), Gaps = 4/124 (3%)
Frame = -3
Query: 590 YSPTS-PGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSP 420
+SPTS PGYSP+SP YSP+SP Y PTSP Y+P S YSP S YSP++ SP+SP YSP
Sbjct: 115 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 174
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
TSP YSPTSPSYSPTSPSYSP+S +YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 175 TSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPTSPA 234
Query: 242 QYTP 231
Y+P
Sbjct: 235 -YSP 237
Score = 150 bits (378), Expect = 9e-35
Identities = 83/128 (64%), Positives = 89/128 (69%), Gaps = 15/128 (11%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP-YSPT 417
YSPT P YSPT PSYSPTSPSY PTSPSY+P S YSP+ AYSP++ SP SP YSPT
Sbjct: 235 YSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPT 294
Query: 416 SPNYSPTSPSY------------SPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSP 276
SP+YSPTSPSY SPTSP SPSSP YSPSSP S SP YSP S YSP
Sbjct: 295 SPSYSPTSPSYNPSARYSPSLAYSPTSPKLSPSSP-YSPSSPSYSPTSPSYSPTSPSYSP 353
Query: 275 TLPGYSPS 252
+ P YSPS
Sbjct: 354 SSPTYSPS 361
Score = 111 bits (278), Expect = 4e-23
Identities = 70/134 (52%), Positives = 81/134 (60%), Gaps = 18/134 (13%)
Frame = -3
Query: 578 SPGYSPTS----------PSY--SPTSPSYGPTSPSYNPQ--SAKYSP--SIAYSPSNAR 447
+PG SP S P+Y SP T ++P +SP S YSPS+
Sbjct: 70 TPGRSPISGTPYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAFSPTSSPGYSPSSPG 129
Query: 446 LSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPT 273
SP+SP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP YSP S YSPT
Sbjct: 130 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 189
Query: 272 LPGYSPSSTGQYTP 231
P YSP+S+ Y+P
Sbjct: 190 SPSYSPTSS-SYSP 202
[107][TOP]
>UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MI48_9CHLO
Length = 1694
Score = 162 bits (411), Expect = 1e-38
Identities = 85/128 (66%), Positives = 98/128 (76%), Gaps = 8/128 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYN-----PQSAKYSP-SIAYSPSNARLSPASP 429
+SPTSPGYSPTSP+YSPTSP+Y PTSP+Y+ P S YSP S AYSP++ SP SP
Sbjct: 1528 FSPTSPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSP 1587
Query: 428 -YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSP 255
YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P YSP
Sbjct: 1588 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1647
Query: 254 SSTGQYTP 231
+S QY+P
Sbjct: 1648 TSP-QYSP 1654
Score = 154 bits (390), Expect = 4e-36
Identities = 83/145 (57%), Positives = 101/145 (69%), Gaps = 17/145 (11%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS-----YSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP 429
YSPTSP YSPTSP+ YSPTSP+Y PTSP+Y+P S YSP S AYSP++ SP SP
Sbjct: 1549 YSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1608
Query: 428 -YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA----------GY 282
YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP++
Sbjct: 1609 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSVGLSDVENAPTR 1668
Query: 281 SPTLPGYSPSSTGQYTPHEGDKKDK 207
SPT P YSP+ G ++P E +K++
Sbjct: 1669 SPTSPQYSPTE-GAFSPMETTEKEE 1692
[108][TOP]
>UniRef100_Q5CUJ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cryptosporidium parvum
Iowa II RepID=Q5CUJ2_CRYPV
Length = 1902
Score = 162 bits (411), Expect = 1e-38
Identities = 80/122 (65%), Positives = 94/122 (77%), Gaps = 2/122 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSP Y PTSP Y+P S YSP S YSP++ SP SP YSPT
Sbjct: 1724 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1783
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SP+YSPTSP YSP+SP YSP+SP YSP+SP + ASP+YSP++ YSPT P Y+P+S Y
Sbjct: 1784 SPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSP-NY 1842
Query: 236 TP 231
+P
Sbjct: 1843 SP 1844
Score = 150 bits (380), Expect = 6e-35
Identities = 82/133 (61%), Positives = 94/133 (70%), Gaps = 13/133 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSP Y PTSP Y+P S YSP S YSP++ SP SP YSP+
Sbjct: 1738 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPS 1797
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPT----------L 270
SP+YSPTSP YSPTSP+Y+P+SP YSP+S YS SP+Y+P S YSP+
Sbjct: 1798 SPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSP-TSPNYNPTSPNYSPSSPNYISNNSGS 1856
Query: 269 PGYSPSSTGQYTP 231
PGYSPSS QY P
Sbjct: 1857 PGYSPSSP-QYDP 1868
Score = 134 bits (338), Expect = 4e-30
Identities = 71/120 (59%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
S SP SPTSP YSPTSP Y PTSP Y+P S YSP+ + YSPTSP+
Sbjct: 1676 SNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPH------------YSPTSPH 1723
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1724 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP-HYSP 1782
Score = 126 bits (317), Expect = 1e-27
Identities = 70/126 (55%), Positives = 80/126 (63%), Gaps = 6/126 (4%)
Frame = -3
Query: 590 YSPTSP-----GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPY 426
YSP+SP S SP SPTSP Y PTSP Y+P S YSP+ + Y
Sbjct: 1663 YSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPH------------Y 1710
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP S YSPT P YSP+S
Sbjct: 1711 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1770
Query: 248 TGQYTP 231
Y+P
Sbjct: 1771 P-HYSP 1775
Score = 124 bits (310), Expect = 7e-27
Identities = 77/153 (50%), Positives = 90/153 (58%), Gaps = 34/153 (22%)
Frame = -3
Query: 587 SPTSPG-------YSPTSPS-----YSPTSPSYGPTSPSYNPQSAK-------------- 486
SP SPG YSP SPS Y+PTSP Y +SP+YN + ++
Sbjct: 1603 SPVSPGGIFSPVPYSPMSPSSPLMDYTPTSPIYAASSPTYNTEVSERARKKYKVNNTLSS 1662
Query: 485 YSPSIAYSPSNA------RLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 327
YSPS + N LSP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP
Sbjct: 1663 YSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1722
Query: 326 YSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
+ S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1723 HYSPTSPHYSPTSPHYSPTSPHYSPTSP-HYSP 1754
Score = 122 bits (306), Expect = 2e-26
Identities = 64/115 (55%), Positives = 75/115 (65%), Gaps = 7/115 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSP YSP+SP YSPTSP Y PTSP+YNP S YSP+ YSP++ Y+PTSP
Sbjct: 1787 YSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPN------YNPTSP 1840
Query: 410 NYSPTSPSY---SPTSPSYSPSSPTYSPSSPYSSGASPDYS----PSAGYSPTLP 267
NYSP+SP+Y + SP YSPSSP Y P + S SP YS A YSP+ P
Sbjct: 1841 NYSPSSPNYISNNSGSPGYSPSSPQYDPIAVASVPRSPSYSVGKMVDAEYSPSSP 1895
Score = 74.7 bits (182), Expect = 5e-12
Identities = 63/151 (41%), Positives = 72/151 (47%), Gaps = 39/151 (25%)
Frame = -3
Query: 566 SPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN------- 408
SP SP SP SP Y SY P S P I+ S +++P SP SP SP
Sbjct: 1565 SPMSP-LSPMSPLY----QSYEPMS----PMISGQFSPVQMTPRSPMSPVSPGGIFSPVP 1615
Query: 407 YSPTSPS-----YSPTSPSYSPSSPT---------------------YSPSSPYS----- 321
YSP SPS Y+PTSP Y+ SSPT YSPSSP +
Sbjct: 1616 YSPMSPSSPLMDYTPTSPIYAASSPTYNTEVSERARKKYKVNNTLSSYSPSSPLNSDNKI 1675
Query: 320 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
S SPD SP S YSPT P YSP+S Y+P
Sbjct: 1676 SNISPDLSPTSPHYSPTSPHYSPTSP-HYSP 1705
[109][TOP]
>UniRef100_Q5CH45 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium hominis
RepID=Q5CH45_CRYHO
Length = 1895
Score = 162 bits (411), Expect = 1e-38
Identities = 80/122 (65%), Positives = 94/122 (77%), Gaps = 2/122 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSP Y PTSP Y+P S YSP S YSP++ SP SP YSPT
Sbjct: 1717 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1776
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SP+YSPTSP YSP+SP YSP+SP YSP+SP + ASP+YSP++ YSPT P Y+P+S Y
Sbjct: 1777 SPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSP-NY 1835
Query: 236 TP 231
+P
Sbjct: 1836 SP 1837
Score = 150 bits (380), Expect = 6e-35
Identities = 82/133 (61%), Positives = 94/133 (70%), Gaps = 13/133 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSP Y PTSP Y+P S YSP S YSP++ SP SP YSP+
Sbjct: 1731 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPS 1790
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPT----------L 270
SP+YSPTSP YSPTSP+Y+P+SP YSP+S YS SP+Y+P S YSP+
Sbjct: 1791 SPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSP-TSPNYNPTSPNYSPSSPNYISNNSGS 1849
Query: 269 PGYSPSSTGQYTP 231
PGYSPSS QY P
Sbjct: 1850 PGYSPSSP-QYDP 1861
Score = 134 bits (338), Expect = 4e-30
Identities = 71/120 (59%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
S SP SPTSP YSPTSP Y PTSP Y+P S YSP+ + YSPTSP+
Sbjct: 1669 SNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPH------------YSPTSPH 1716
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1717 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP-HYSP 1775
Score = 126 bits (317), Expect = 1e-27
Identities = 70/126 (55%), Positives = 80/126 (63%), Gaps = 6/126 (4%)
Frame = -3
Query: 590 YSPTSP-----GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPY 426
YSP+SP S SP SPTSP Y PTSP Y+P S YSP+ + Y
Sbjct: 1656 YSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPH------------Y 1703
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP S YSPT P YSP+S
Sbjct: 1704 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1763
Query: 248 TGQYTP 231
Y+P
Sbjct: 1764 P-HYSP 1768
Score = 124 bits (310), Expect = 7e-27
Identities = 77/153 (50%), Positives = 90/153 (58%), Gaps = 34/153 (22%)
Frame = -3
Query: 587 SPTSPG-------YSPTSPS-----YSPTSPSYGPTSPSYNPQSAK-------------- 486
SP SPG YSP SPS Y+PTSP Y +SP+YN + ++
Sbjct: 1596 SPVSPGGIFSPVPYSPMSPSSPLMDYTPTSPIYAASSPTYNTEVSERARKKYKVNNTLSS 1655
Query: 485 YSPSIAYSPSNA------RLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 327
YSPS + N LSP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP
Sbjct: 1656 YSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1715
Query: 326 YSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
+ S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1716 HYSPTSPHYSPTSPHYSPTSPHYSPTSP-HYSP 1747
Score = 122 bits (306), Expect = 2e-26
Identities = 64/115 (55%), Positives = 75/115 (65%), Gaps = 7/115 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSP YSP+SP YSPTSP Y PTSP+YNP S YSP+ YSP++ Y+PTSP
Sbjct: 1780 YSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPN------YNPTSP 1833
Query: 410 NYSPTSPSY---SPTSPSYSPSSPTYSPSSPYSSGASPDYS----PSAGYSPTLP 267
NYSP+SP+Y + SP YSPSSP Y P + S SP YS A YSP+ P
Sbjct: 1834 NYSPSSPNYISNNSGSPGYSPSSPQYDPIAVTSVPRSPSYSVGKMVDAEYSPSSP 1888
Score = 74.7 bits (182), Expect = 5e-12
Identities = 63/151 (41%), Positives = 72/151 (47%), Gaps = 39/151 (25%)
Frame = -3
Query: 566 SPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN------- 408
SP SP SP SP Y SY P S P I+ S +++P SP SP SP
Sbjct: 1558 SPMSP-LSPMSPLY----QSYEPMS----PMISGQFSPVQMTPRSPMSPVSPGGIFSPVP 1608
Query: 407 YSPTSPS-----YSPTSPSYSPSSPT---------------------YSPSSPYS----- 321
YSP SPS Y+PTSP Y+ SSPT YSPSSP +
Sbjct: 1609 YSPMSPSSPLMDYTPTSPIYAASSPTYNTEVSERARKKYKVNNTLSSYSPSSPLNSDNKI 1668
Query: 320 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
S SPD SP S YSPT P YSP+S Y+P
Sbjct: 1669 SNISPDLSPTSPHYSPTSPHYSPTSP-HYSP 1698
[110][TOP]
>UniRef100_UPI00006A20E2 DNA-directed RNA polymerase II subunit RPB1 (EC 2.7.7.6) (RNA
polymerase II subunit B1) (DNA-directed RNA polymerase
II subunit A) (DNA-directed RNA polymerase III largest
subunit). n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A20E2
Length = 162
Score = 161 bits (407), Expect = 4e-38
Identities = 80/120 (66%), Positives = 92/120 (76%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP Y+PTSPSYSP+SP Y PTSP Y+P S KYSP S YSP++ SP +P YSPT
Sbjct: 24 YSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPT 83
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS----AGYSPTLPGYSPSS 249
SP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+ + YSPT PGYSP+S
Sbjct: 84 SPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 143
Score = 158 bits (400), Expect = 3e-37
Identities = 77/117 (65%), Positives = 92/117 (78%), Gaps = 3/117 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y+P+SP YSP+SPSYSPTSP Y PTSPSY+P S +Y+P S YSP++ + SP SP YSPT
Sbjct: 10 YTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 69
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP S YSPT P YSP+S
Sbjct: 70 SPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS 126
Score = 157 bits (398), Expect = 5e-37
Identities = 78/123 (63%), Positives = 93/123 (75%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP-YSPT 417
Y+P SP Y+P+SPSYSP+SPSY PTSP Y P S YSPS Y+P++ + SP SP YSPT
Sbjct: 3 YTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 62
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP S YSPT P YSP+S
Sbjct: 63 SPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSP-T 121
Query: 239 YTP 231
Y+P
Sbjct: 122 YSP 124
Score = 151 bits (382), Expect = 3e-35
Identities = 78/134 (58%), Positives = 92/134 (68%), Gaps = 9/134 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
Y+PTSP YSP+SP Y+PTSP Y PTSP Y+P S KYSP S YSP+ + SP SP
Sbjct: 31 YTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPT 90
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S GYSPT P YS
Sbjct: 91 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TSPGYSPTSPTYS 147
Query: 257 PSSTGQYTPHEGDK 216
+S +P + D+
Sbjct: 148 LTSPA-ISPDDSDE 160
Score = 147 bits (371), Expect = 6e-34
Identities = 74/118 (62%), Positives = 91/118 (77%), Gaps = 3/118 (2%)
Frame = -3
Query: 575 PGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTSPNYS 402
P Y+P SPSY+P+SPSY P+SPSY+P S KY+P S +YSPS+ +P SP YSPTSP YS
Sbjct: 1 PRYTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 60
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
PTSP YSPTSP+YSP++P YSP+SP S SP Y+P S YSPT P YSP+S +Y+P
Sbjct: 61 PTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP-KYSP 117
[111][TOP]
>UniRef100_A4S3M0 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S3M0_OSTLU
Length = 1646
Score = 161 bits (407), Expect = 4e-38
Identities = 84/130 (64%), Positives = 99/130 (76%), Gaps = 2/130 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S AYSP+ SPA YSPTS
Sbjct: 1523 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT----SPA--YSPTS 1576
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQY 237
P YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P YSP+S Y
Sbjct: 1577 PAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-Y 1635
Query: 236 TPHEGDKKDK 207
+P E ++ ++
Sbjct: 1636 SPKEEEENEE 1645
Score = 129 bits (324), Expect = 2e-28
Identities = 71/118 (60%), Positives = 81/118 (68%), Gaps = 2/118 (1%)
Frame = -3
Query: 578 SPGYSPTS-PSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYS 402
SPG SP YSPTSP+Y PTSP+Y+P S YSP+ SPA YSPTSP YS
Sbjct: 1512 SPGMSPGGFGGYSPTSPAYSPTSPAYSPTSPAYSPT----------SPA--YSPTSPAYS 1559
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
PTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1560 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1616
Score = 107 bits (266), Expect = 9e-22
Identities = 66/126 (52%), Positives = 81/126 (64%), Gaps = 10/126 (7%)
Frame = -3
Query: 578 SPGYSPTSPSY--SPTS-PSYGPTSPSYNPQSAKYSPSIAYSPSNAR-----LSPASP-Y 426
+PG+ SPS+ SP S TS +++P YS +A+SP + SP SP Y
Sbjct: 1475 TPGWGSKSPSFLLSPGGHQSPFDTSMAFSP----YSDGMAFSPGMSPGGFGGYSPTSPAY 1530
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1531 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1590
Query: 248 TGQYTP 231
Y+P
Sbjct: 1591 PA-YSP 1595
[112][TOP]
>UniRef100_P35074 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
briggsae RepID=RPB1_CAEBR
Length = 1853
Score = 161 bits (407), Expect = 4e-38
Identities = 81/125 (64%), Positives = 94/125 (75%), Gaps = 5/125 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI----AYSPSNARLSPASP-Y 426
YSP+SP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP+ YSPS+ + SP+SP Y
Sbjct: 1672 YSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTY 1731
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSST 246
SPTSP+YSPTSP YSPTSP YSPSSPTY+PSSP + SP S YSPT P YSP+S
Sbjct: 1732 SPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSSPQYSPTSPTYSPTSP 1791
Query: 245 GQYTP 231
YTP
Sbjct: 1792 -SYTP 1795
Score = 160 bits (406), Expect = 5e-38
Identities = 84/120 (70%), Positives = 93/120 (77%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY---SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-Y 426
YSPTSP YSPTSP++ SP SPSY PTSPSY+P S YSP S +YSP++ SP SP Y
Sbjct: 1592 YSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1651
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SPTSP+YSPTSPSYSPTSPSYSPSSP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1652 SPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTS 1711
Score = 160 bits (406), Expect = 5e-38
Identities = 82/121 (67%), Positives = 95/121 (78%), Gaps = 2/121 (1%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 414
SP SP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPTS
Sbjct: 1610 SPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1669
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYT 234
P+YSP+SP YSPTSP+YSP+SPTYSP+SP S SP YSP+ SP+ GYSPSS +Y+
Sbjct: 1670 PSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPT---SPSYEGYSPSSP-KYS 1725
Query: 233 P 231
P
Sbjct: 1726 P 1726
Score = 154 bits (389), Expect = 5e-36
Identities = 82/122 (67%), Positives = 95/122 (77%), Gaps = 2/122 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTS 414
YSP SPG+S TSP YSPTSPSY PTSP+++ QS SPS YSP++ SP SP YSPTS
Sbjct: 1578 YSPASPGFSMTSPHYSPTSPSYSPTSPAHHGQSP-VSPS--YSPTSPSYSPTSPSYSPTS 1634
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQY 237
P+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPS+ YSPT P YSP+S Y
Sbjct: 1635 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSP-TY 1693
Query: 236 TP 231
+P
Sbjct: 1694 SP 1695
Score = 151 bits (382), Expect = 3e-35
Identities = 77/129 (59%), Positives = 93/129 (72%), Gaps = 9/129 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP----- 429
YSP+SP YSP+SP+YSPTSPSY PTSP Y+P S +YSPS Y+PS+ +P SP
Sbjct: 1717 YSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSS 1776
Query: 428 --YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYS 258
YSPTSP YSPTSPSY+P+SP YSP+SPTY+PS G S YSPS+ YSP+ P YS
Sbjct: 1777 PQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPTYS 1836
Query: 257 PSSTGQYTP 231
P+S Y+P
Sbjct: 1837 PASP-SYSP 1844
Score = 139 bits (349), Expect = 2e-31
Identities = 72/129 (55%), Positives = 85/129 (65%), Gaps = 15/129 (11%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTS 414
YSPTSP YSPTSP YSPTSP Y P+SP+Y P S Y+P+ + S+ + SP SP YSPTS
Sbjct: 1731 YSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSSPQYSPTSPTYSPTS 1790
Query: 413 PNYSPTSPSYSPTSPSY--------------SPSSPTYSPSSPYSSGASPDYSPSAGYSP 276
P+Y+P+SP YSPTSP+Y SPSSPTYSPSSP S ASP YSPS+
Sbjct: 1791 PSYTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPTYSPASPSYSPSS---- 1846
Query: 275 TLPGYSPSS 249
P Y P +
Sbjct: 1847 --PTYDPQN 1853
Score = 132 bits (331), Expect = 3e-29
Identities = 78/156 (50%), Positives = 96/156 (61%), Gaps = 36/156 (23%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSY---NPQSAKYSPSI--------AYSPSNARL 444
YSPTSP YSPTSP+YSPTSP+Y PTSPSY +P S KYSPS +YSP++ +
Sbjct: 1686 YSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQY 1745
Query: 443 SPASP-YSPTSPNYSPTSPSYSPTSP----------------SYSPSSPTYSPSSPYSSG 315
SP SP YSP+SP Y+P+SP+Y+PTSP P+SP+Y+PSSP S
Sbjct: 1746 SPTSPQYSPSSPTYTPSSPTYNPTSPRAFSSPQYSPTSPTYS---PTSPSYTPSSPQYSP 1802
Query: 314 ASPDYSPSAG--------YSPTLPGYSPSSTGQYTP 231
SP Y+PS YSP+ P YSPSS Y+P
Sbjct: 1803 TSPTYTPSPADQPGTSNQYSPSSPTYSPSSP-TYSP 1837
Score = 108 bits (271), Expect = 2e-22
Identities = 66/131 (50%), Positives = 78/131 (59%), Gaps = 17/131 (12%)
Frame = -3
Query: 572 GYSPTSP-----SYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSP 411
G+SP SP + SP +P+YG SP YSP++ S SP YSPTSP
Sbjct: 1550 GWSPASPGDPLGALSPRTPAYGGMSPG------------VYSPASPGFSMTSPHYSPTSP 1597
Query: 410 NYSPT----------SPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
+YSPT SPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1598 SYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1657
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1658 YSPTSP-SYSP 1667
[113][TOP]
>UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351
Length = 2085
Score = 160 bits (406), Expect = 5e-38
Identities = 85/136 (62%), Positives = 96/136 (70%), Gaps = 16/136 (11%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYS------------PSIAYSPSNAR 447
YSPTSP YSPTSP Y+PTS +Y PTSPSYNP S YS PS +YSP++
Sbjct: 1632 YSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPS 1691
Query: 446 LSPASP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYS 279
SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S S YSP S YS
Sbjct: 1692 YSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYS 1751
Query: 278 PTLPGYSPSSTGQYTP 231
PT PGYSP+S Y+P
Sbjct: 1752 PTSPGYSPTSP-SYSP 1766
Score = 153 bits (387), Expect = 9e-36
Identities = 80/126 (63%), Positives = 94/126 (74%), Gaps = 6/126 (4%)
Frame = -3
Query: 590 YSPTSPGYS--PTSPSYSPTSPSYG--PTSPSYNPQSAKYSP-SIAYSPSNARLSPASP- 429
YSPTSP YS PTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP
Sbjct: 1676 YSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1735
Query: 428 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
YSPTS YSPTSP+YSPTSP YSP+SP+YSPSSP + +S Y+PS YSP+ P Y S+
Sbjct: 1736 YSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSST 1795
Query: 248 TGQYTP 231
+ Y+P
Sbjct: 1796 SPTYSP 1801
Score = 149 bits (376), Expect = 2e-34
Identities = 81/128 (63%), Positives = 91/128 (71%), Gaps = 4/128 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S AYSP++ SP SP YSPT
Sbjct: 1701 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPT 1760
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
SP+YSP+SPSY+P+S Y+PS YSPSSP Y S SP YSP S YS P YSP+
Sbjct: 1761 SPSYSPSSPSYNPSSVKYTPSH-AYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSPTRGE 1819
Query: 242 QYTPHEGD 219
+ GD
Sbjct: 1820 EGAIANGD 1827
Score = 133 bits (334), Expect = 1e-29
Identities = 80/164 (48%), Positives = 93/164 (56%), Gaps = 44/164 (26%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP-ASPYSPT 417
Y PTS +SPTSP YS TSP Y P+SP Y+P S YSP S YSP++ +P +S YSPT
Sbjct: 1597 YVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPT 1656
Query: 416 SP-----------------------------------------NYSPTSPSYSPTSPSYS 360
SP NYSPTSPSYSPTSPSYS
Sbjct: 1657 SPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYS 1716
Query: 359 PSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P+SP+YSP+SP S SP YSP S+ YSPT P YSP+S G Y+P
Sbjct: 1717 PTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPG-YSP 1759
Score = 113 bits (283), Expect = 1e-23
Identities = 74/149 (49%), Positives = 88/149 (59%), Gaps = 29/149 (19%)
Frame = -3
Query: 590 YSPTSPGYSP------TSPSYSPTSPSYGP--------TSPSYNPQSAKYSP-------- 477
YSP+ P +P +S Y+P SP Y P TSPSY P S +SP
Sbjct: 1555 YSPSPPVCTPGPGSFTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSAT 1614
Query: 476 SIAYSPSNARLSPAS-PYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YS-SGASP 306
S YSPS+ SP S YSPTSP YSPTSP Y+PTS +YSP+SP+Y+P+SP YS S SP
Sbjct: 1615 SPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSP 1674
Query: 305 DY---SPSAGYSPTLPGYSPSSTG-QYTP 231
Y SPS YSPT P YSP+S Y+P
Sbjct: 1675 SYSPTSPSYSYSPTSPSYSPTSPSYNYSP 1703
Score = 69.7 bits (169), Expect = 2e-10
Identities = 54/135 (40%), Positives = 64/135 (47%), Gaps = 32/135 (23%)
Frame = -3
Query: 557 SPSY--------SPT------SPSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPY 426
SPSY SPT SP G + S Y+PS YSPS +P
Sbjct: 1509 SPSYLLSPDIRASPTAADAQFSPYVGGMAFSPVSSPGNYTPSSGGGYSPSPPVCTPGPGS 1568
Query: 425 SPTSPNYSPTSPSYSP--------TSPSYSPSSPTYSPSSPYSSGASPDYSPSA------ 288
+S Y+P SP YSP TSPSY P+S +SP+SP S SP YSPS+
Sbjct: 1569 FTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPT 1628
Query: 287 --GYSPTLPGYSPSS 249
YSPT P YSP+S
Sbjct: 1629 SLSYSPTSPVYSPTS 1643
[114][TOP]
>UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q5WMZ9_ORYSJ
Length = 1741
Score = 160 bits (406), Expect = 5e-38
Identities = 85/136 (62%), Positives = 96/136 (70%), Gaps = 16/136 (11%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYS------------PSIAYSPSNAR 447
YSPTSP YSPTSP Y+PTS +Y PTSPSYNP S YS PS +YSP++
Sbjct: 1579 YSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPS 1638
Query: 446 LSPASP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYS 279
SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S S YSP S YS
Sbjct: 1639 YSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYS 1698
Query: 278 PTLPGYSPSSTGQYTP 231
PT PGYSP+S Y+P
Sbjct: 1699 PTSPGYSPTSP-SYSP 1713
Score = 158 bits (399), Expect = 3e-37
Identities = 86/129 (66%), Positives = 96/129 (74%), Gaps = 9/129 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYS--PTSPSYGPTSPSYN--PQSAKYSP---SIAYSPSNARLSPAS 432
YSPTSP Y+PTSPSYS PTSPSY PTSPSY+ P S YSP S YSP++ SP S
Sbjct: 1600 YSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTS 1659
Query: 431 P-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYS 258
P YSPTSP+YSPTSPSYSPTSPSYSP+S YSP+SP S SP YSP S YSP+ P Y+
Sbjct: 1660 PSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYN 1719
Query: 257 PSSTGQYTP 231
PSS +YTP
Sbjct: 1720 PSSV-KYTP 1727
Score = 150 bits (379), Expect = 7e-35
Identities = 84/146 (57%), Positives = 94/146 (64%), Gaps = 26/146 (17%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSP+SP YSPTS SYSPTSP Y PTSP YNP S+ YSP+ SPS SP+ YSPTSP
Sbjct: 1565 YSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPT---SPSYNPTSPSYSYSPTSP 1621
Query: 410 -------------------------NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 306
NYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP
Sbjct: 1622 SYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1681
Query: 305 DYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSP S+ YSPT P YSP+S G Y+P
Sbjct: 1682 SYSPTSSAYSPTSPAYSPTSPG-YSP 1706
Score = 150 bits (379), Expect = 7e-35
Identities = 82/125 (65%), Positives = 95/125 (76%), Gaps = 7/125 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYS--PTSPSYGPTSPSYN--PQSAKYSP-SIAYSPSNARLSPASP- 429
YSPTSP YSPTSPSYS PTSPSY PTSPSYN P S YSP S +YSP++ SP SP
Sbjct: 1616 YSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1675
Query: 428 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPS 252
YSPTSP+YSPTS +YSPTSP+YSP+SP YSP+SP S +SP Y+PS+ Y+P+ YSPS
Sbjct: 1676 YSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPS-HAYSPS 1734
Query: 251 STGQY 237
S Y
Sbjct: 1735 SPNYY 1739
Score = 113 bits (283), Expect = 1e-23
Identities = 74/149 (49%), Positives = 88/149 (59%), Gaps = 29/149 (19%)
Frame = -3
Query: 590 YSPTSPGYSP------TSPSYSPTSPSYGP--------TSPSYNPQSAKYSP-------- 477
YSP+ P +P +S Y+P SP Y P TSPSY P S +SP
Sbjct: 1502 YSPSPPVCTPGPGSFTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSAT 1561
Query: 476 SIAYSPSNARLSPAS-PYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YS-SGASP 306
S YSPS+ SP S YSPTSP YSPTSP Y+PTS +YSP+SP+Y+P+SP YS S SP
Sbjct: 1562 SPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSP 1621
Query: 305 DY---SPSAGYSPTLPGYSPSSTG-QYTP 231
Y SPS YSPT P YSP+S Y+P
Sbjct: 1622 SYSPTSPSYSYSPTSPSYSPTSPSYNYSP 1650
Score = 69.7 bits (169), Expect = 2e-10
Identities = 54/135 (40%), Positives = 64/135 (47%), Gaps = 32/135 (23%)
Frame = -3
Query: 557 SPSY--------SPT------SPSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPY 426
SPSY SPT SP G + S Y+PS YSPS +P
Sbjct: 1456 SPSYLLSPDIRASPTAADAQFSPYVGGMAFSPVSSPGNYTPSSGGGYSPSPPVCTPGPGS 1515
Query: 425 SPTSPNYSPTSPSYSP--------TSPSYSPSSPTYSPSSPYSSGASPDYSPSA------ 288
+S Y+P SP YSP TSPSY P+S +SP+SP S SP YSPS+
Sbjct: 1516 FTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPT 1575
Query: 287 --GYSPTLPGYSPSS 249
YSPT P YSP+S
Sbjct: 1576 SLSYSPTSPVYSPTS 1590
[115][TOP]
>UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DKN9_ORYSJ
Length = 1834
Score = 160 bits (406), Expect = 5e-38
Identities = 85/136 (62%), Positives = 96/136 (70%), Gaps = 16/136 (11%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYS------------PSIAYSPSNAR 447
YSPTSP YSPTSP Y+PTS +Y PTSPSYNP S YS PS +YSP++
Sbjct: 1632 YSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPS 1691
Query: 446 LSPASP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYS 279
SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S S YSP S YS
Sbjct: 1692 YSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYS 1751
Query: 278 PTLPGYSPSSTGQYTP 231
PT PGYSP+S Y+P
Sbjct: 1752 PTSPGYSPTSP-SYSP 1766
Score = 153 bits (387), Expect = 9e-36
Identities = 80/126 (63%), Positives = 94/126 (74%), Gaps = 6/126 (4%)
Frame = -3
Query: 590 YSPTSPGYS--PTSPSYSPTSPSYG--PTSPSYNPQSAKYSP-SIAYSPSNARLSPASP- 429
YSPTSP YS PTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP
Sbjct: 1676 YSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1735
Query: 428 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
YSPTS YSPTSP+YSPTSP YSP+SP+YSPSSP + +S Y+PS YSP+ P Y S+
Sbjct: 1736 YSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSST 1795
Query: 248 TGQYTP 231
+ Y+P
Sbjct: 1796 SPTYSP 1801
Score = 153 bits (387), Expect = 9e-36
Identities = 82/132 (62%), Positives = 96/132 (72%), Gaps = 4/132 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S AYSP++ SP SP YSPT
Sbjct: 1701 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPT 1760
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
SP+YSP+SPSY+P+S Y+PS YSPSSP Y S SP YSP S YS P YSP+S
Sbjct: 1761 SPSYSPSSPSYNPSSVKYTPSH-AYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSPTSRV 1819
Query: 242 QYTPHEGDKKDK 207
+ HE ++++
Sbjct: 1820 EEEAHEEAEEEE 1831
Score = 149 bits (375), Expect = 2e-34
Identities = 86/166 (51%), Positives = 104/166 (62%), Gaps = 21/166 (12%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYS--PTSPSYGPTSPSYN--PQSAKYSP-SIAYSPSNARLSPASP- 429
YSPTSP YSPTSPSYS PTSPSY PTSPSYN P S YSP S +YSP++ SP SP
Sbjct: 1669 YSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1728
Query: 428 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAG------------ 285
YSPTSP+YSPTS +YSPTSP+YSP+SP YSP+SP S +SP Y+PS+
Sbjct: 1729 YSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSS 1788
Query: 284 ---YSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP*KR 156
YS T P YSP+S P +++A ++ + KR
Sbjct: 1789 PNYYSSTSPTYSPTSPSYSQPSPSYSPTSRVEEEAHEEAEEEEPKR 1834
Score = 133 bits (334), Expect = 1e-29
Identities = 80/164 (48%), Positives = 93/164 (56%), Gaps = 44/164 (26%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP-ASPYSPT 417
Y PTS +SPTSP YS TSP Y P+SP Y+P S YSP S YSP++ +P +S YSPT
Sbjct: 1597 YVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPT 1656
Query: 416 SP-----------------------------------------NYSPTSPSYSPTSPSYS 360
SP NYSPTSPSYSPTSPSYS
Sbjct: 1657 SPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYS 1716
Query: 359 PSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P+SP+YSP+SP S SP YSP S+ YSPT P YSP+S G Y+P
Sbjct: 1717 PTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPG-YSP 1759
Score = 113 bits (283), Expect = 1e-23
Identities = 74/149 (49%), Positives = 88/149 (59%), Gaps = 29/149 (19%)
Frame = -3
Query: 590 YSPTSPGYSP------TSPSYSPTSPSYGP--------TSPSYNPQSAKYSP-------- 477
YSP+ P +P +S Y+P SP Y P TSPSY P S +SP
Sbjct: 1555 YSPSPPVCTPGPGSFTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSAT 1614
Query: 476 SIAYSPSNARLSPAS-PYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YS-SGASP 306
S YSPS+ SP S YSPTSP YSPTSP Y+PTS +YSP+SP+Y+P+SP YS S SP
Sbjct: 1615 SPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSP 1674
Query: 305 DY---SPSAGYSPTLPGYSPSSTG-QYTP 231
Y SPS YSPT P YSP+S Y+P
Sbjct: 1675 SYSPTSPSYSYSPTSPSYSPTSPSYNYSP 1703
Score = 69.7 bits (169), Expect = 2e-10
Identities = 54/135 (40%), Positives = 64/135 (47%), Gaps = 32/135 (23%)
Frame = -3
Query: 557 SPSY--------SPT------SPSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPY 426
SPSY SPT SP G + S Y+PS YSPS +P
Sbjct: 1509 SPSYLLSPDIRASPTAADAQFSPYVGGMAFSPVSSPGNYTPSSGGGYSPSPPVCTPGPGS 1568
Query: 425 SPTSPNYSPTSPSYSP--------TSPSYSPSSPTYSPSSPYSSGASPDYSPSA------ 288
+S Y+P SP YSP TSPSY P+S +SP+SP S SP YSPS+
Sbjct: 1569 FTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPT 1628
Query: 287 --GYSPTLPGYSPSS 249
YSPT P YSP+S
Sbjct: 1629 SLSYSPTSPVYSPTS 1643
[116][TOP]
>UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IRZ2_CHLRE
Length = 1789
Score = 160 bits (406), Expect = 5e-38
Identities = 82/124 (66%), Positives = 94/124 (75%), Gaps = 6/124 (4%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTSP 411
P SPGYSPTSP YSPTSP Y PTSP+Y+P S YSP S AYSP++ SP SP YSPTSP
Sbjct: 1545 PMSPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1604
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS---STG 243
YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P YSP+ ++
Sbjct: 1605 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPAYSPTSP 1664
Query: 242 QYTP 231
QY+P
Sbjct: 1665 QYSP 1668
Score = 139 bits (349), Expect = 2e-31
Identities = 73/123 (59%), Positives = 84/123 (68%), Gaps = 6/123 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S AYSP++ SP SP
Sbjct: 1599 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPA 1658
Query: 428 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
YSPTSP YSPTSPS SPTSP YSP+SP YSP+ SP+YSPS P+S
Sbjct: 1659 YSPTSPQYSPTSPSMSPTSPRYSPTSPNYSPT-------SPNYSPSTRQRRRSTRPRPTS 1711
Query: 248 TGQ 240
G+
Sbjct: 1712 LGR 1714
Score = 116 bits (290), Expect = 2e-24
Identities = 64/138 (46%), Positives = 83/138 (60%), Gaps = 26/138 (18%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-----YSPSNARLSPASP- 429
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP+ + YSP++ +SP SP
Sbjct: 1620 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPAYSPTSPQYSPTSPSMSPTSPR 1679
Query: 428 YSPTSPNYSPTSPSYSPTSPSYSPS------------------SPTYSP--SSPYSSGAS 309
YSPTSPNYSPTSP+YSP++ S +PT +P + P S S
Sbjct: 1680 YSPTSPNYSPTSPNYSPSTRQRRRSTRPRPTSLGRRRAARVQAAPTPAPPTAPPRMSAPS 1739
Query: 308 PDYSPSAGYSPTLPGYSP 255
+P + + PT P +P
Sbjct: 1740 THLAPPSAHPPTRPRRAP 1757
Score = 102 bits (253), Expect = 3e-20
Identities = 65/130 (50%), Positives = 78/130 (60%), Gaps = 21/130 (16%)
Frame = -3
Query: 557 SPSYSPTSPSYGPTSPSYNPQSAKYSPSI----------AYSPSNAR---------LSPA 435
+PS SP GP SPS+ S +SP + A+SP++ SP
Sbjct: 1496 TPSRSPARTP-GPMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVGGPMSPGYSPT 1553
Query: 434 SP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P Y
Sbjct: 1554 SPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1613
Query: 260 SPSSTGQYTP 231
SP+S Y+P
Sbjct: 1614 SPTSPA-YSP 1622
[117][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
RepID=Q9AXN0_9RHOD
Length = 1746
Score = 160 bits (404), Expect = 9e-38
Identities = 80/120 (66%), Positives = 93/120 (77%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----Y 426
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S YSPS+ +SPA Y
Sbjct: 1620 YSPTSPAYSPTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSY 1679
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSS 249
SP+SP+YSP+SP YSP+SP YSPSSP YSPSSP S +SP YSPS+ YSP+ P YSPSS
Sbjct: 1680 SPSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQYSPSSPQYSPSSPAYSPSSPAYSPSS 1739
Score = 157 bits (396), Expect = 8e-37
Identities = 86/129 (66%), Positives = 95/129 (73%), Gaps = 13/129 (10%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTSPNY 405
SPGYSPTSP+YSPTSPSY PTSPSY+P S YSP S AYSP++ SP SP YSPTSP Y
Sbjct: 1596 SPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSPTYSPTSPTY 1655
Query: 404 SPTSPSYSPTSP----------SYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYS 258
SPTSP YSP+SP SYSPSSP YSPSSP S +SP YSPS+ YSP+ P YS
Sbjct: 1656 SPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQYS 1715
Query: 257 PSSTGQYTP 231
PSS QY+P
Sbjct: 1716 PSSP-QYSP 1723
Score = 152 bits (384), Expect = 2e-35
Identities = 83/132 (62%), Positives = 95/132 (71%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 414
SP+SPG SP YSPTSP+Y PTSPSY+P S YSP S AYSP++ SP SP YSPTS
Sbjct: 1586 SPSSPGGVAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTS 1645
Query: 413 PNYSPTSPSYSPTSPSYSPSSP----------TYSPSSPYSSGASPDYSPSA-GYSPTLP 267
P YSPTSP+YSPTSP YSPSSP +YSPSSP+ S +SP YSPS+ YSP+ P
Sbjct: 1646 PTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHYSPSSP 1705
Query: 266 GYSPSSTGQYTP 231
YSPSS QY+P
Sbjct: 1706 HYSPSSP-QYSP 1716
Score = 149 bits (376), Expect = 2e-34
Identities = 73/118 (61%), Positives = 88/118 (74%), Gaps = 12/118 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS-----------IAYSPSNARL 444
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSPS ++YSPS+
Sbjct: 1627 YSPTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHY 1686
Query: 443 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPT 273
SP+SP YSP+SP+YSP+SP YSP+SP YSPSSP YSPSSP S +SP YSPS+ P+
Sbjct: 1687 SPSSPQYSPSSPHYSPSSPHYSPSSPQYSPSSPQYSPSSPAYSPSSPAYSPSSPAHPS 1744
Score = 116 bits (291), Expect = 1e-24
Identities = 67/120 (55%), Positives = 75/120 (62%), Gaps = 1/120 (0%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
+PTSP Y+ SP + SP SP +A YSP SP SP YSPTSP
Sbjct: 1550 TPTSPAYA--SPYGTAASPFNAMASPYSRAGNAFYSPRSPSSPGGVAASPG--YSPTSPT 1605
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSP-MYSP 1664
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSP--ASPYSPTS 414
+P + SP +P + G +P Y + +PS Y+P + SP ASPY +
Sbjct: 1488 TPRAGLMSPAHGFDTPRAFDAGSMTP-YPATPGQATPSYPYTPIGGQFSPFAASPYGDAA 1546
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-----------SAGYSPTLP 267
+ +PTSP+Y+ SP + +SP + +SPYS + YSP S GYSPT P
Sbjct: 1547 FSPTPTSPAYA--SPYGTAASPFNAMASPYSRAGNAFYSPRSPSSPGGVAASPGYSPTSP 1604
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1605 TYSPTSP-SYSP 1615
[118][TOP]
>UniRef100_Q8SSC4 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Encephalitozoon
cuniculi RepID=RPB1_ENCCU
Length = 1599
Score = 160 bits (404), Expect = 9e-38
Identities = 85/131 (64%), Positives = 96/131 (73%), Gaps = 6/131 (4%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
SPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP+ SPS + SP+ YSPTSP+
Sbjct: 1467 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT---SPSYSPTSPS--YSPTSPS 1521
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSP-----SST 246
YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YS S+
Sbjct: 1522 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSVSMSSFSNK 1581
Query: 245 GQYTPHEGDKK 213
+ +GDKK
Sbjct: 1582 NKSKNQDGDKK 1592
Score = 116 bits (290), Expect = 2e-24
Identities = 67/123 (54%), Positives = 83/123 (67%), Gaps = 6/123 (4%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS---IAYSPS-NARLSPASP-YSPT 417
++P + P P+ S P+S S++ S +SP+ +AYS RLSP SP YSPT
Sbjct: 1420 SNPVFKPNEPATPVIST---PSSDSFSISSGNWSPTHLEMAYSRDLGERLSPTSPSYSPT 1476
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1477 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1535
Query: 239 YTP 231
Y+P
Sbjct: 1536 YSP 1538
Score = 72.4 bits (176), Expect = 3e-11
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA 468
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YS S++
Sbjct: 1536 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSVSMS 1576
Score = 65.1 bits (157), Expect = 4e-09
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYS 480
YSPTSP YSPTSPSYSPTSPSY PTSPSY+ + +S
Sbjct: 1543 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSVSMSSFS 1579
[119][TOP]
>UniRef100_A8Q5I6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8Q5I6_MALGO
Length = 1607
Score = 157 bits (396), Expect = 8e-37
Identities = 84/136 (61%), Positives = 94/136 (69%), Gaps = 16/136 (11%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-------------YGPTSPSYNPQSAKYSP-SIAYSPSN 453
YSPTSP YSPTSP YSPTSP+ Y PTSP Y+P S +YSP S YSP++
Sbjct: 1445 YSPTSPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTSPQYSPTS 1504
Query: 452 ARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYS 279
+ SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP S YS
Sbjct: 1505 PQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYS 1564
Query: 278 PTLPGYSPSSTGQYTP 231
PT P YSP+S QY+P
Sbjct: 1565 PTSPQYSPTSP-QYSP 1579
Score = 156 bits (394), Expect = 1e-36
Identities = 84/136 (61%), Positives = 95/136 (69%), Gaps = 16/136 (11%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPS-------------YNPQSAKYSP-SIAYSPSN 453
YSPTSP YSPTSP+YSPTSP Y PTSP+ Y+P S +YSP S YSP++
Sbjct: 1438 YSPTSPVYSPTSPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTS 1497
Query: 452 ARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYS 279
+ SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP S YS
Sbjct: 1498 PQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYS 1557
Query: 278 PTLPGYSPSSTGQYTP 231
PT P YSP+S QY+P
Sbjct: 1558 PTSPQYSPTSP-QYSP 1572
Score = 153 bits (386), Expect = 1e-35
Identities = 83/135 (61%), Positives = 92/135 (68%), Gaps = 16/135 (11%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSA-------------KYSP-SIAYSPSNA 450
SP SP YSPTSP YSPTSP+Y PTSP Y+P S KYSP S YSP++
Sbjct: 1432 SPASPNYSPTSPVYSPTSPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSP 1491
Query: 449 RLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSP 276
+ SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP S YSP
Sbjct: 1492 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1551
Query: 275 TLPGYSPSSTGQYTP 231
T P YSP+S QY+P
Sbjct: 1552 TSPQYSPTSP-QYSP 1565
Score = 153 bits (386), Expect = 1e-35
Identities = 81/129 (62%), Positives = 89/129 (68%), Gaps = 16/129 (12%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS-------------YSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSN 453
YSPTSP YSPTSP+ YSPTSP Y PTSP Y+P S +YSP S YSP++
Sbjct: 1452 YSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS 1511
Query: 452 ARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYS 279
+ SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP S YS
Sbjct: 1512 PQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYS 1571
Query: 278 PTLPGYSPS 252
PT P YSPS
Sbjct: 1572 PTSPQYSPS 1580
Score = 147 bits (372), Expect = 5e-34
Identities = 79/142 (55%), Positives = 90/142 (63%), Gaps = 22/142 (15%)
Frame = -3
Query: 590 YSPTSPGYSPTSP--------------------SYSPTSPSYGPTSPSYNPQSAKYSPSI 471
YSPTSP YSP+SP +YSPTSP Y PTSP+Y+P S +YSP+
Sbjct: 1404 YSPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPTSPAYSPTSPQYSPTS 1463
Query: 470 AYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP 294
P RL + P YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP
Sbjct: 1464 PAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1523
Query: 293 -SAGYSPTLPGYSPSSTGQYTP 231
S YSPT P YSP+S QY+P
Sbjct: 1524 TSPQYSPTSPQYSPTSP-QYSP 1544
Score = 135 bits (340), Expect = 2e-30
Identities = 69/102 (67%), Positives = 75/102 (73%), Gaps = 7/102 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSP Y PTSP Y+P S +YSP S YSP++ + SP SP YSPT
Sbjct: 1493 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1552
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPS-----SPYSSGASP 306
SP YSPTSP YSPTSP YSP+SP YSPS S S ASP
Sbjct: 1553 SPQYSPTSPQYSPTSPQYSPTSPQYSPSGNVGASAASGAASP 1594
Score = 108 bits (270), Expect = 3e-22
Identities = 67/154 (43%), Positives = 85/154 (55%), Gaps = 34/154 (22%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
++PTSPGY PTSP+Y+ TSP+ G SP A S AYSP++ R+ + TSP
Sbjct: 1350 FAPTSPGYVPTSPAYNATSPALGAMSPWVGAAGAT---SPAYSPTSPRIFAGA----TSP 1402
Query: 410 NYSPTSPSYSPT--------------------SPSYSPSSPTYSPSSPYSSGASPDYSPS 291
+YSPTSPSYSP+ SP+YSP+SP YSP+SP S SP YSP+
Sbjct: 1403 SYSPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPTSPAYSPTSPQYSPT 1462
Query: 290 A--------------GYSPTLPGYSPSSTGQYTP 231
+ YSPT P YSP+S QY+P
Sbjct: 1463 SPAGPRGRRLGASGPKYSPTSPQYSPTSP-QYSP 1495
Score = 71.6 bits (174), Expect = 4e-11
Identities = 56/130 (43%), Positives = 65/130 (50%), Gaps = 41/130 (31%)
Frame = -3
Query: 497 QSAKYSPSIAYSPSNARLSPASP-YSPTSPNYS-----------------PTSPSYSP-- 378
QS +P A SP +P SP Y PTSP Y+ TSP+YSP
Sbjct: 1334 QSPMRTPLGAQSPGYG-FAPTSPGYVPTSPAYNATSPALGAMSPWVGAAGATSPAYSPTS 1392
Query: 377 -------TSPSYSPSSPTYSPSSPY-------------SSGASPDYSP-SAGYSPTLPGY 261
TSPSYSP+SP+YSPSSP S ASP+YSP S YSPT P Y
Sbjct: 1393 PRIFAGATSPSYSPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPTSPAY 1452
Query: 260 SPSSTGQYTP 231
SP+S QY+P
Sbjct: 1453 SPTSP-QYSP 1461
[120][TOP]
>UniRef100_Q7Q3C6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7Q3C6_ANOGA
Length = 1878
Score = 155 bits (393), Expect = 2e-36
Identities = 87/159 (54%), Positives = 98/159 (61%), Gaps = 23/159 (14%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----- 429
YSPTSP YSPTSPSYSP+SP + PTSPSY+P S YSP S +YSP++ SP SP
Sbjct: 1651 YSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPV 1710
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY---------SPSAG 285
YSP+SPNYSPTSP YSP SPSYSPSSP YSP+SP S SP Y SP G
Sbjct: 1711 TPSYSPSSPNYSPTSPHYSPASPSYSPSSPKYSPTSPSYSPTSPSYIGSPHYTPASPQYG 1770
Query: 284 -----YSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASK 183
YSPT P YSPSS Q++P G S+
Sbjct: 1771 QASPNYSPTSPSYSPSSP-QHSPGSSSNHYSIGSSSYSQ 1808
Score = 149 bits (375), Expect = 2e-34
Identities = 83/140 (59%), Positives = 96/140 (68%), Gaps = 20/140 (14%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPT-----SPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP 429
YSPTSP YSP SP + + SP Y PTSPSY+P S YSPS +SP++ SP+SP
Sbjct: 1625 YSPTSPSYSPMSPMHPTSASNFASPGYSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSP 1684
Query: 428 -YSPTSPNYSPTSPSYSPTS-------PSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSP 276
YSPTSP+YSPTSPSYSPTS PSYSPSSP YSP+SP+ S ASP YSPS+ YSP
Sbjct: 1685 SYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSSPKYSP 1744
Query: 275 TLPGYSPSS-----TGQYTP 231
T P YSP+S + YTP
Sbjct: 1745 TSPSYSPTSPSYIGSPHYTP 1764
Score = 146 bits (369), Expect = 1e-33
Identities = 80/140 (57%), Positives = 91/140 (65%), Gaps = 20/140 (14%)
Frame = -3
Query: 590 YSPTSPGYSPTSP-----SYSPTSPSYGPTSPSYNPQSAKYSPSIA--------YSPSNA 450
YSP+SP Y+P SP SYSPTSP Y P SP Y+P S+ YSPS YSP++
Sbjct: 1571 YSPSSPNYAPNSPGGASPSYSPTSPGYSPPSPQYSPGSSNYSPSSPNIHSATQNYSPTSP 1630
Query: 449 RLSPASPYSPTS------PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-S 291
SP SP PTS P YSPTSPSYSPTSPSYSPSSP +SP+SP S +SP YSP S
Sbjct: 1631 SYSPMSPMHPTSASNFASPGYSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTS 1690
Query: 290 AGYSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S +TP
Sbjct: 1691 PSYSPTSPSYSPTSP-NFTP 1709
Score = 144 bits (364), Expect = 4e-33
Identities = 82/152 (53%), Positives = 95/152 (62%), Gaps = 32/152 (21%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
YSP+SP YSPTSPSYSPTSPSY PTSP++ P + YSPS YSP++ SPASP YSP+
Sbjct: 1679 YSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPS 1738
Query: 416 SPNYSPTSPSYSPTSPSY--------------------SPSSPTYSPSSP---------- 327
SP YSPTSPSYSPTSPSY SP+SP+YSPSSP
Sbjct: 1739 SPKYSPTSPSYSPTSPSYIGSPHYTPASPQYGQASPNYSPTSPSYSPSSPQHSPGSSSNH 1798
Query: 326 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 231
YS G+S A YSP + YSPSS +Y+P
Sbjct: 1799 YSIGSSSYSQTPAPYSPNMSSYSPSSP-KYSP 1829
Score = 140 bits (353), Expect = 7e-32
Identities = 85/179 (47%), Positives = 97/179 (54%), Gaps = 60/179 (33%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP--------SIAYSPSNARLSPA 435
YSPTSP YSPTSPSYSPTSP++ P +PSY+P S YSP S +YSPS+ + SP
Sbjct: 1686 YSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSSPKYSPT 1745
Query: 434 SP-YSPTSP--------------------NYSPTSPSYSPTSP----------------- 369
SP YSPTSP NYSPTSPSYSP+SP
Sbjct: 1746 SPSYSPTSPSYIGSPHYTPASPQYGQASPNYSPTSPSYSPSSPQHSPGSSSNHYSIGSSS 1805
Query: 368 -------------SYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYT 234
SYSPSSP YSP+SP + +SP YSPS+ YSPT GYSPSS T
Sbjct: 1806 YSQTPAPYSPNMSSYSPSSPKYSPTSPVYTSSSPTYSPSSPAYSPTPQGYSPSSPASPT 1864
Score = 127 bits (320), Expect = 5e-28
Identities = 76/145 (52%), Positives = 85/145 (58%), Gaps = 31/145 (21%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSY---------NPQ----SAKYSP-SIAYSPSN 453
YSP SP YSP+SP YSPTSPSY PTSPSY +PQ S YSP S +YSPS+
Sbjct: 1728 YSPASPSYSPSSPKYSPTSPSYSPTSPSYIGSPHYTPASPQYGQASPNYSPTSPSYSPSS 1787
Query: 452 ARLSPAS-----------------PYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 324
+ SP S PYSP +YSP+SP YSPTSP Y+ SSPTYSPSSP
Sbjct: 1788 PQHSPGSSSNHYSIGSSSYSQTPAPYSPNMSSYSPSSPKYSPTSPVYTSSSPTYSPSSPA 1847
Query: 323 SSGASPDYSPSAGYSPTLPGYSPSS 249
S YSPS SP P YSP+S
Sbjct: 1848 YSPTPQGYSPS---SPASPTYSPTS 1869
Score = 120 bits (302), Expect = 6e-26
Identities = 71/145 (48%), Positives = 83/145 (57%), Gaps = 31/145 (21%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSY--------------------GPTSPSYNPQSAKYSP-- 477
YSP+SP YSPTSPSYSPTSPSY PTSPSY+P S ++SP
Sbjct: 1735 YSPSSPKYSPTSPSYSPTSPSYIGSPHYTPASPQYGQASPNYSPTSPSYSPSSPQHSPGS 1794
Query: 476 --------SIAYSPSNARLSP-ASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 324
S +YS + A SP S YSP+SP YSPTSP Y+ +SP+YSPSSP YSP+
Sbjct: 1795 SSNHYSIGSSSYSQTPAPYSPNMSSYSPSSPKYSPTSPVYTSSSPTYSPSSPAYSPT--- 1851
Query: 323 SSGASPDYSPSAGYSPTLPGYSPSS 249
G SP S YSPT P Y S+
Sbjct: 1852 PQGYSPSSPASPTYSPTSPSYDDSN 1876
Score = 107 bits (267), Expect = 7e-22
Identities = 75/163 (46%), Positives = 84/163 (51%), Gaps = 44/163 (26%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNAR--LSPASP-YSPT 417
SP+SPG PS SP PS SPSY+P S Y+P+ SP A SP SP YSP
Sbjct: 1549 SPSSPG-----PSMSPYPPSSPSMSPSYSPSSPNYAPN---SPGGASPSYSPTSPGYSPP 1600
Query: 416 SP---------------------NYSPTSPS-------------------YSPTSPSYSP 357
SP NYSPTSPS YSPTSPSYSP
Sbjct: 1601 SPQYSPGSSNYSPSSPNIHSATQNYSPTSPSYSPMSPMHPTSASNFASPGYSPTSPSYSP 1660
Query: 356 SSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 231
+SP+YSPSSP S SP YSPS+ YSPT P YSP+S Y+P
Sbjct: 1661 TSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSP-SYSP 1702
Score = 79.7 bits (195), Expect = 2e-13
Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 11/130 (8%)
Frame = -3
Query: 587 SPTSPGYSPTSPS--YSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP---YS 423
+P G+SP+ P+ +P PS+ P++ S ++ SPS ++SP R SP+SP S
Sbjct: 1505 TPGYGGWSPSGPASGMTPGGPSFSPSAQS---DASGMSPS-SWSP--IRGSPSSPGPSMS 1558
Query: 422 PTSPNYSPTSPSYSPTSPSYSP-----SSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
P P+ SPSYSP+SP+Y+P +SP+YSP+SP S SP YSP S+ YSP+ P
Sbjct: 1559 PYPPSSPSMSPSYSPSSPNYAPNSPGGASPSYSPTSPGYSPPSPQYSPGSSNYSPSSPNI 1618
Query: 260 SPSSTGQYTP 231
S+T Y+P
Sbjct: 1619 H-SATQNYSP 1627
[121][TOP]
>UniRef100_A9TK89 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TK89_PHYPA
Length = 1646
Score = 155 bits (392), Expect = 2e-36
Identities = 77/118 (65%), Positives = 87/118 (73%), Gaps = 3/118 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
+SP+SPGYSP+SP YSP SP Y PTSP Y+P S YSP S YSP++ SP SP YSPT
Sbjct: 1521 FSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPT 1580
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSST 246
SP YSPTSPSYSPTSPSY+P+SP+YSP+SP S SP YSP S YSPT P Y T
Sbjct: 1581 SPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYKHKPT 1638
Score = 134 bits (338), Expect = 4e-30
Identities = 65/94 (69%), Positives = 73/94 (77%), Gaps = 2/94 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSPGYSPTSP YSPTSPSY PTSP Y+P S YSP S +YSP++ +P SP YSPT
Sbjct: 1549 YSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPT 1608
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 315
SP+YSPTSPSYSPTSPSYSP+SP Y + G
Sbjct: 1609 SPSYSPTSPSYSPTSPSYSPTSPAYKHKPTWLRG 1642
Score = 111 bits (278), Expect = 4e-23
Identities = 64/118 (54%), Positives = 72/118 (61%), Gaps = 5/118 (4%)
Frame = -3
Query: 569 YSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPNYSPTS 393
+SP+SP YSP+SP Y P SP Y SP SP YSPTSP YSPTS
Sbjct: 1521 FSPSSPGYSPSSPGYSPLSPGY--------------------SPTSPGYSPTSPGYSPTS 1560
Query: 392 PSYSPTSPSYSPSSPTYSPSSPYSSG---ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P YSPTSPSYSP+SP YSP+SP G SP YSP S Y+PT P YSP+S Y+P
Sbjct: 1561 PGYSPTSPSYSPTSPGYSPTSP---GYSPTSPSYSPTSPSYAPTSPSYSPTSP-SYSP 1614
Score = 107 bits (266), Expect = 9e-22
Identities = 65/131 (49%), Positives = 79/131 (60%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSY--------NPQS-AKYSPSIAYSPSNARLSP 438
+ T G +P+ T + G SPSY +P S A++SP + P SP
Sbjct: 1468 FEGTDYGMTPSRSPMIGTPHNEGMMSPSYLLSPSLRASPLSEAQFSPYVGSMP----FSP 1523
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 264
+SP YSP+SP YSP SP YSPTSP YSP+SP YSP+SP S SP YSP S GYSPT PG
Sbjct: 1524 SSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPG 1583
Query: 263 YSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1584 YSPTSP-SYSP 1593
[122][TOP]
>UniRef100_O96446 DNA-directed RNA polymerase n=1 Tax=Vairimorpha necatrix
RepID=O96446_9MICR
Length = 1605
Score = 155 bits (391), Expect = 3e-36
Identities = 83/150 (55%), Positives = 99/150 (66%), Gaps = 14/150 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP+ SP+ YSPTSP
Sbjct: 1467 YSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPT---SPT---------YSPTSP 1514
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS----- 249
+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1515 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1574
Query: 248 --------TGQYTPHEGDKKDKTGKKDASK 183
+ Y+P + + KT +K K
Sbjct: 1575 TSPSYSPTSPSYSPTYDNDEKKTNRKRKGK 1604
Score = 137 bits (345), Expect = 6e-31
Identities = 72/119 (60%), Positives = 83/119 (69%), Gaps = 3/119 (2%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTSPNY 405
SP Y Y+P + Y PTSP+Y+P S YSP S YSP++ SP SP YSPTSP Y
Sbjct: 1450 SPAYLVEGNRYAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTY 1509
Query: 404 SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1510 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1567
Score = 120 bits (300), Expect = 1e-25
Identities = 67/123 (54%), Positives = 84/123 (68%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
+SP S S +S ++SP +Y Y P+++ YSP S YSP++ SP SP YSPT
Sbjct: 1435 HSPVSENLSISSGNWSP---AYLVEGNRYAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPT 1491
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 1492 SPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 1550
Query: 239 YTP 231
Y+P
Sbjct: 1551 YSP 1553
[123][TOP]
>UniRef100_A7AWJ0 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7AWJ0_BABBO
Length = 1746
Score = 154 bits (390), Expect = 4e-36
Identities = 82/127 (64%), Positives = 95/127 (74%), Gaps = 5/127 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSP+Y PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 1609 YSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1668
Query: 416 SPNYSPTSPSYSPTSPS--YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSST 246
SP YSPTSP+YSPTSP+ Y P+SP Y P+SP S SP YSP S YSPT P YSP+S
Sbjct: 1669 SPAYSPTSPAYSPTSPNLGYLPTSPAYRPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSP 1728
Query: 245 GQYTPHE 225
+Y+P +
Sbjct: 1729 -EYSPED 1734
Score = 153 bits (386), Expect = 1e-35
Identities = 81/130 (62%), Positives = 93/130 (71%), Gaps = 5/130 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S AYSP++ SP SP YSPT
Sbjct: 1616 YSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1675
Query: 416 SPNYSPTSPS--YSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSST 246
SP YSPTSP+ Y PTSP+Y P+SP YSP+SP S SP YSP S YSPT P YSP
Sbjct: 1676 SPAYSPTSPNLGYLPTSPAYRPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPEYSPEDP 1735
Query: 245 GQYTPHEGDK 216
P E ++
Sbjct: 1736 FSPNPFEEEE 1745
Score = 145 bits (366), Expect = 2e-33
Identities = 81/132 (61%), Positives = 91/132 (68%), Gaps = 12/132 (9%)
Frame = -3
Query: 590 YSPTSPGY-------SPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA 435
YSPTSP Y SP SP+YSPTSP Y PTSP Y+P S YSP S AYSP++ SP
Sbjct: 1588 YSPTSPVYGQAGGVYSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPT 1647
Query: 434 SP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSS--GASPDYSP-SAGYSPTLP 267
SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP SP Y P S YSPT P
Sbjct: 1648 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPNLGYLPTSPAYRPTSPAYSPTSP 1707
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1708 AYSPTSPA-YSP 1718
Score = 141 bits (356), Expect = 3e-32
Identities = 74/124 (59%), Positives = 86/124 (69%), Gaps = 5/124 (4%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTS 414
SPTSP YSPTSP Y Y P SP+Y+P S YSP S YSP++ SP SP YSPTS
Sbjct: 1582 SPTSPVYSPTSPVYGQAGGVYSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTS 1641
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA---GYSPTLPGYSPSSTG 243
P YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP++ GY PT P Y P+S
Sbjct: 1642 PAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPNLGYLPTSPAYRPTSPA 1701
Query: 242 QYTP 231
Y+P
Sbjct: 1702 -YSP 1704
Score = 132 bits (332), Expect = 2e-29
Identities = 77/129 (59%), Positives = 87/129 (67%), Gaps = 16/129 (12%)
Frame = -3
Query: 587 SPTSPGYSPTSP---SYSPTSPSYG---PTSPSYNPQS-------AKYSP-SIAYSPSNA 450
SP SP Y+P SP S +P SPS G PTSP Y+P S YSP S AYSP++
Sbjct: 1555 SPVSPSYAPLSPNPLSPNPLSPSMGMMSPTSPVYSPTSPVYGQAGGVYSPASPAYSPTSP 1614
Query: 449 RLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSP 276
SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSP
Sbjct: 1615 LYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1674
Query: 275 TLPGYSPSS 249
T P YSP+S
Sbjct: 1675 TSPAYSPTS 1683
Score = 90.1 bits (222), Expect = 1e-16
Identities = 64/139 (46%), Positives = 80/139 (57%), Gaps = 21/139 (15%)
Frame = -3
Query: 584 PTSPGYSPT--SPSYSPTSPSYGPTSPSYNPQS--AKYSPSIA-----YSPSNARLSP-- 438
P SP Y+ SP + +SPS+ TSP+ + ++ +SP+I SPS A LSP
Sbjct: 1510 PFSPSYAALMMSPIVNVSSPSF-VTSPAVDTKALGGSFSPTIMSPQSPVSPSYAPLSPNP 1568
Query: 437 --ASPYSPTSPNYSPTSPSYSPTSP-------SYSPSSPTYSPSSPYSSGASPDYSP-SA 288
+P SP+ SPTSP YSPTSP YSP+SP YSP+SP S SP YSP S
Sbjct: 1569 LSPNPLSPSMGMMSPTSPVYSPTSPVYGQAGGVYSPASPAYSPTSPLYSPTSPVYSPTSP 1628
Query: 287 GYSPTLPGYSPSSTGQYTP 231
YSPT P YSP+S Y+P
Sbjct: 1629 AYSPTSPAYSPTSPA-YSP 1646
[124][TOP]
>UniRef100_O77165 DNA-directed RNA polymerase (Fragment) n=1 Tax=Breviata anathema
RepID=O77165_9EUKA
Length = 1690
Score = 154 bits (388), Expect = 7e-36
Identities = 78/123 (63%), Positives = 90/123 (73%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP SP YSP SP+YSP SP+Y P SP+Y+P S YSP S AYSP++ SPASP YSP
Sbjct: 1506 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1565
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSP SP+YSP SP+YSP+SP YSP+SP S ASP YSP S YSP P YSP+S
Sbjct: 1566 SPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPA- 1624
Query: 239 YTP 231
Y+P
Sbjct: 1625 YSP 1627
Score = 154 bits (388), Expect = 7e-36
Identities = 78/123 (63%), Positives = 90/123 (73%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP SP YSP SP+YSP SP+Y P SP+Y+P S YSP S AYSP++ SPASP YSP
Sbjct: 1513 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1572
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSP SP+YSP SP+YSP+SP YSP+SP S ASP YSP S YSP P YSP+S
Sbjct: 1573 SPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPA- 1631
Query: 239 YTP 231
Y+P
Sbjct: 1632 YSP 1634
Score = 153 bits (386), Expect = 1e-35
Identities = 76/117 (64%), Positives = 87/117 (74%), Gaps = 3/117 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP SP YSP SP+YSP SP+Y P SP+Y+P S YSP S AYSP++ SPASP YSP
Sbjct: 1534 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1593
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SP YSP SP+YSP SP+YSP+SP YSP+SP S ASP YSP S YSP P YSP+S
Sbjct: 1594 SPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPAS 1650
Score = 152 bits (385), Expect = 1e-35
Identities = 78/125 (62%), Positives = 89/125 (71%), Gaps = 3/125 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP SP YSP SP+YSP SP+Y P SP+Y+P S YSP S AYSP++ SPASP YSP
Sbjct: 1562 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1621
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSP SP+YSP SP+YSP+SP YSP+SP ASP YSP S YSP P YSP+S
Sbjct: 1622 SPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPASPAYSPASPA- 1680
Query: 239 YTPHE 225
Y P E
Sbjct: 1681 YDPAE 1685
Score = 152 bits (384), Expect = 2e-35
Identities = 77/123 (62%), Positives = 89/123 (72%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP SP YSP SP+YSP SP+Y P SP+Y+P S YSP S AYSP++ SPASP YSP
Sbjct: 1555 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1614
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP YSP SP+YSP SP+YSP+SP YSP+SP S ASP Y P S YSP P YSP+S
Sbjct: 1615 SPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPASPA- 1673
Query: 239 YTP 231
Y+P
Sbjct: 1674 YSP 1676
Score = 140 bits (354), Expect = 6e-32
Identities = 70/111 (63%), Positives = 80/111 (72%), Gaps = 3/111 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP SP YSP SP+YSP SP+Y P SP+Y+P S YSP S AYSP++ SPASP YSP
Sbjct: 1576 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1635
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 267
SP YSP SP+YSP SP+Y P+SP YSP+SP S ASP YSP S Y P P
Sbjct: 1636 SPAYSPASPAYSPASPAYGPASPAYSPASPAYSPASPAYSPASPAYDPAEP 1686
Score = 140 bits (353), Expect = 7e-32
Identities = 72/121 (59%), Positives = 85/121 (70%), Gaps = 2/121 (1%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSP 411
SP + GYSP SP+YSP SP+Y P SP+Y+P S AYSP++ SPASP YSP SP
Sbjct: 1500 SPAAAGYSPASPAYSPASPAYSPASPAYSPASP------AYSPASPAYSPASPAYSPASP 1553
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYT 234
YSP SP+YSP SP+YSP+SP YSP+SP S ASP YSP S YSP P YSP+S Y+
Sbjct: 1554 AYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPA-YS 1612
Query: 233 P 231
P
Sbjct: 1613 P 1613
Score = 140 bits (352), Expect = 1e-31
Identities = 75/124 (60%), Positives = 87/124 (70%), Gaps = 6/124 (4%)
Frame = -3
Query: 584 PTSPGY---SPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSP 420
P SP SP SP+YSP SP+Y P SP+Y+P S YSP S AYSP++ SPASP YSP
Sbjct: 1498 PGSPAAAGYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSP 1557
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
SP YSP SP+YSP SP+YSP+SP YSP+SP S ASP YSP S YSP P YSP+S
Sbjct: 1558 ASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPA 1617
Query: 242 QYTP 231
Y+P
Sbjct: 1618 -YSP 1620
Score = 137 bits (346), Expect = 5e-31
Identities = 66/105 (62%), Positives = 77/105 (73%), Gaps = 2/105 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP SP YSP SP+YSP SP+Y P SP+Y+P S YSP S AYSP++ SPASP YSP
Sbjct: 1583 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA 1642
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGY 282
SP YSP SP+Y P SP+YSP+SP YSP+SP S ASP Y P+ Y
Sbjct: 1643 SPAYSPASPAYGPASPAYSPASPAYSPASPAYSPASPAYDPAEPY 1687
Score = 110 bits (275), Expect = 8e-23
Identities = 64/122 (52%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Frame = -3
Query: 584 PTSPG---YSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTS 414
P+SPG Y P S P + Y P SP+Y+P S YSP+ SPA YSP S
Sbjct: 1486 PSSPGPFGYIPVPGS--PAAAGYSPASPAYSPASPAYSPA----------SPA--YSPAS 1531
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQY 237
P YSP SP+YSP SP+YSP+SP YSP+SP S ASP YSP S YSP P YSP+S Y
Sbjct: 1532 PAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPA-Y 1590
Query: 236 TP 231
+P
Sbjct: 1591 SP 1592
[125][TOP]
>UniRef100_UPI000151A8B3 hypothetical protein PGUG_01105 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B3
Length = 1018
Score = 152 bits (385), Expect = 1e-35
Identities = 77/116 (66%), Positives = 87/116 (75%), Gaps = 3/116 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y SPGY TSP+YSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 805 YGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 864
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P+
Sbjct: 865 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTFAKLQPN 920
Score = 152 bits (383), Expect = 2e-35
Identities = 76/116 (65%), Positives = 86/116 (74%), Gaps = 3/116 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
Y TSP Y SP Y TSP+Y PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 798 YGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 857
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+
Sbjct: 858 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 913
Score = 149 bits (377), Expect = 1e-34
Identities = 79/123 (64%), Positives = 91/123 (73%), Gaps = 4/123 (3%)
Frame = -3
Query: 587 SPTSP-GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
SPTSP Y TSP+Y SP YG TSP+Y+P S YSP S +YSP++ SP SP YSPT
Sbjct: 791 SPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 850
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 851 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-S 909
Query: 239 YTP 231
Y+P
Sbjct: 910 YSP 912
Score = 131 bits (330), Expect = 3e-29
Identities = 69/104 (66%), Positives = 77/104 (74%), Gaps = 6/104 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP++ SP SP YSPT
Sbjct: 819 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 878
Query: 416 SPNYSPTSPSYSPTSPSYS----PSSPTYSPSSPYSSGASPDYS 297
SP+YSPTSPSYSPTSPSYS SPT SP + P++S
Sbjct: 879 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTFAKLQPNFS 922
Score = 57.0 bits (136), Expect = 1e-06
Identities = 25/35 (71%), Positives = 26/35 (74%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAK 486
YSPTSP YSPTSPSYSPTSPSY PT P +K
Sbjct: 889 YSPTSPSYSPTSPSYSPTSPSYSPTFAKLQPNFSK 923
[126][TOP]
>UniRef100_UPI00017B0A92 UPI00017B0A92 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0A92
Length = 1714
Score = 151 bits (381), Expect = 4e-35
Identities = 84/138 (60%), Positives = 94/138 (68%), Gaps = 18/138 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTS 414
Y+P SPGYSPTSPSYSPTSPSY PTSPSY+P S YSP+ SPS P SP YSPTS
Sbjct: 1585 YTPQSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT---SPS----GPTSPSYSPTS 1637
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPS-------------SPYSSGASPDYSPS----AG 285
P+YSPTSPSYSPTSPSYSP+SP Y+P S YS SP YSP+ +
Sbjct: 1638 PSYSPTSPSYSPTSPSYSPTSPNYTPPHQLVPTSPYTPHISVYSPPTSPTYSPTSPKGST 1697
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT PGYSP+S Y+P
Sbjct: 1698 YSPTSPGYSPTSP-TYSP 1714
Score = 120 bits (300), Expect = 1e-25
Identities = 75/142 (52%), Positives = 84/142 (59%), Gaps = 25/142 (17%)
Frame = -3
Query: 578 SPGYSPT------SP-SYSPTSPSY----GPTSPSYNPQSAKYSPSI--AYSPSNARLSP 438
SPGYSP SP S P SP G SP+Y+P S Y P Y+P + SP
Sbjct: 1535 SPGYSPAWSPTPGSPGSPGPASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSP 1594
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYS------PSSPTYSPSSPYSSGASPDYSP-SAGY 282
SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YSP+SP S SP YSP S Y
Sbjct: 1595 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPTSPSYSPTSPSYSPTSPSY 1654
Query: 281 SPTLPGYSPS----STGQYTPH 228
SPT P Y+P T YTPH
Sbjct: 1655 SPTSPNYTPPHQLVPTSPYTPH 1676
Score = 118 bits (295), Expect = 4e-25
Identities = 72/134 (53%), Positives = 83/134 (61%), Gaps = 13/134 (9%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPT-----SPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYS 423
SP SPG P SP Y P+ SP+Y PTSP+Y P+S Y+P SP YS
Sbjct: 1548 SPGSPG--PASP-YIPSPGGAMSPNYSPTSPAYEPRSPG-----GYTPQ----SPG--YS 1593
Query: 422 PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP--------SAGYSPTLP 267
PTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1594 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SGPTSPSYSPTSPSYSPTSPSYSPTSP 1652
Query: 266 GYSPSSTGQYTPHE 225
YSP+S PH+
Sbjct: 1653 SYSPTSPNYTPPHQ 1666
Score = 98.6 bits (244), Expect = 3e-19
Identities = 70/160 (43%), Positives = 85/160 (53%), Gaps = 41/160 (25%)
Frame = -3
Query: 587 SPTSPGYSPT-SPSYSPTSPSYGPTSPSYN----PQSAKYSPSIA---------YSP--- 459
SP S G SP +P + +P+YG SPS P +A +SPS A YSP
Sbjct: 1485 SPMS-GMSPAMTPWNTGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWS 1543
Query: 458 ----SNARLSPASPYSPT-----SPNYSPTSPS---------------YSPTSPSYSPSS 351
S PASPY P+ SPNYSPTSP+ YSPTSPSYSP+S
Sbjct: 1544 PTPGSPGSPGPASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSYSPTS 1603
Query: 350 PTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 231
P+YSP+SP S SP YSP++ PT P YSP+S Y+P
Sbjct: 1604 PSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPTSP-SYSP 1642
[127][TOP]
>UniRef100_C5Y387 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Y387_SORBI
Length = 1874
Score = 149 bits (376), Expect = 2e-34
Identities = 81/119 (68%), Positives = 89/119 (74%), Gaps = 5/119 (4%)
Frame = -3
Query: 590 YSPTS--PGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPAS-PYS 423
+SPTS P YSP S SYSPTSP Y PTSPSY+P S YSP S YSP++ SPAS YS
Sbjct: 1650 FSPTSTSPSYSPASASYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPASLSYS 1709
Query: 422 PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
PTSP YSPTSPSYSP+SPSYSP+SPTYSP+S S SP YSP S YSPT P YSP+S
Sbjct: 1710 PTSPFYSPTSPSYSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNYSPTS 1768
Score = 145 bits (365), Expect = 3e-33
Identities = 76/129 (58%), Positives = 88/129 (68%), Gaps = 5/129 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARL---SPASPYSP 420
YSPTSPGYSPTSP+YSPTSP+Y PTSPSYN +Y+ S YSP+ R+ S A YSP
Sbjct: 1743 YSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLSYTEYNSSNTYSPTRPRITLDSQAPDYSP 1802
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPS--SPYSSGASPDYSPSAGYSPTLPGYSPSST 246
TSP YSPTSPSYS S SYSP+ PT SP S SP++SP+ SPT YSPSST
Sbjct: 1803 TSPTYSPTSPSYSLPSLSYSPNRPTDDSGRPSPDYSPTSPNFSPNRSDSPTAADYSPSST 1862
Query: 245 GQYTPHEGD 219
GQ +G+
Sbjct: 1863 GQAIEKDGE 1871
Score = 141 bits (356), Expect = 3e-32
Identities = 78/138 (56%), Positives = 90/138 (65%), Gaps = 18/138 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP--------SIAYSPSNARLSPA 435
YSPTSP YSP S SYSPTSP Y PTSPSY+P S YSP S +YSPS+ SP
Sbjct: 1673 YSPTSPSYSPASLSYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPSSPSYSPT 1732
Query: 434 SP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPT----- 273
SP YSPTS YSPTSP YSPTSP+YSP+SP YSP+SP + + +Y+ S YSPT
Sbjct: 1733 SPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLSYTEYNSSNTYSPTRPRIT 1792
Query: 272 ----LPGYSPSSTGQYTP 231
P YSP+S Y+P
Sbjct: 1793 LDSQAPDYSPTSP-TYSP 1809
Score = 137 bits (344), Expect = 8e-31
Identities = 79/155 (50%), Positives = 95/155 (61%), Gaps = 35/155 (22%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSP-----------------------SYNPQSAKYS 480
Y+P SP YSPT+P Y+P SP Y PT+P YNP S +S
Sbjct: 1592 YTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYSSASPIYNPISPNSSRYNPSSPSFS 1651
Query: 479 P---SIAYSPSNARLSPASP-YSPTSP-------NYSPTSPSYSPTSPSYSPSSPTYSPS 333
P S +YSP++A SP SP YSPTSP +YSPTSP YSPTSPSYSP+S +YSP+
Sbjct: 1652 PTSTSPSYSPASASYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPASLSYSPT 1711
Query: 332 SPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 231
SP+ S SP YSPS+ YSPT P YSP+S G Y+P
Sbjct: 1712 SPFYSPTSPSYSPSSPSYSPTSPTYSPTSLG-YSP 1745
Score = 70.1 bits (170), Expect = 1e-10
Identities = 52/135 (38%), Positives = 71/135 (52%), Gaps = 22/135 (16%)
Frame = -3
Query: 569 YSPTSPSYSPTSPSYGPTSPSYNP---QSAKYSPSIAYSPSNARLSPA-SPYSPTSPNYS 402
Y+ SP S S P+ Y+P + YSP I S +SP +PY+ SP +
Sbjct: 1528 YASFSPYVRDMSLSPVPSQGGYSPIPRSESGYSP-IPRSVRYMAVSPIYTPYNAASPVNA 1586
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSP-YS------------SGASPDYSP----SAGYSPT 273
TS SY+P SP YSP++P Y+P SP YS S ASP Y+P S+ Y+P+
Sbjct: 1587 STSTSYTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYSSASPIYNPISPNSSRYNPS 1646
Query: 272 LPGYSPSSTG-QYTP 231
P +SP+ST Y+P
Sbjct: 1647 SPSFSPTSTSPSYSP 1661
[128][TOP]
>UniRef100_Q5KGG3 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KGG3_CRYNE
Length = 1786
Score = 143 bits (361), Expect = 9e-33
Identities = 79/143 (55%), Positives = 93/143 (65%), Gaps = 23/143 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA------YSPSNARLSPASP 429
YSPTSP YSPTSP +SPTSPS+ P+SP+Y+P S Y + A YSP++ SP SP
Sbjct: 1598 YSPTSPQYSPTSPQFSPTSPSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSPAYSPTSP 1657
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPT--------YSPSSPYSSGASPDYS 297
YSPTSP YSPTSP++SPTSPSYSP+SP YSP+SP S SP YS
Sbjct: 1658 MGGITSPQYSPTSPRYSPTSPAFSPTSPSYSPTSPAPFQATSPRYSPTSPQFSPTSPTYS 1717
Query: 296 P-SAGYSPTLPGYSPSSTGQYTP 231
P S YSPT P YSP+S Y+P
Sbjct: 1718 PASPAYSPTSPQYSPTSPA-YSP 1739
Score = 137 bits (344), Expect = 8e-31
Identities = 73/132 (55%), Positives = 86/132 (65%), Gaps = 1/132 (0%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSP YSPTSP TSP Y PTSP Y+P S +SP+ SPS + SPA P+ TSP
Sbjct: 1645 YSPTSPAYSPTSPMGGITSPQYSPTSPRYSPTSPAFSPT---SPSYSPTSPA-PFQATSP 1700
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYT 234
YSPTSP +SPTSP+YSP+SP YSP+SP S SP YSP S YSPT P Y G
Sbjct: 1701 RYSPTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAY-----GGAA 1755
Query: 233 PHEGDKKDKTGK 198
P+ G + + G+
Sbjct: 1756 PNGGTAQQQNGQ 1767
Score = 129 bits (324), Expect = 2e-28
Identities = 75/149 (50%), Positives = 88/149 (59%), Gaps = 25/149 (16%)
Frame = -3
Query: 590 YSPTSPGY------------SPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNA 450
YSP SP Y SPTSP+YSPTSP G TSP Y+P S +YSP S A+SP++
Sbjct: 1626 YSPASPAYGGAGAGNRASPYSPTSPAYSPTSPMGGITSPQYSPTSPRYSPTSPAFSPTSP 1685
Query: 449 RLSPASP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 297
SP SP YSPTSP +SPTSP+YSP SP+YSP+SP YSP+SP S SP YS
Sbjct: 1686 SYSPTSPAPFQATSPRYSPTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPAYSPTSPAYS 1745
Query: 296 P-SAGYSPTLP--GYSPSSTGQYTPHEGD 219
P S Y P G + GQ P G+
Sbjct: 1746 PTSPAYGGAAPNGGTAQQQNGQARPGWGN 1774
Score = 119 bits (298), Expect = 2e-25
Identities = 71/145 (48%), Positives = 90/145 (62%), Gaps = 25/145 (17%)
Frame = -3
Query: 590 YSPTSP-GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP----------SIAYSPSNARL 444
YSP+SP GYSPTSP ++ TSP+Y PTSP + SP S AYSP++ +
Sbjct: 1547 YSPSSPAGYSPTSP-FAVTSPAYSPTSPFAGAAAGAASPWVGRGGYGATSPAYSPTSPQY 1605
Query: 443 SPASP-YSPTSPNYSPTSPSYSPTSPS------------YSPSSPTYSPSSPYSSGASPD 303
SP SP +SPTSP++SP+SP+YSP SP+ YSP+SP YSP+SP SP
Sbjct: 1606 SPTSPQFSPTSPSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSPAYSPTSPMGGITSPQ 1665
Query: 302 YSP-SAGYSPTLPGYSPSSTGQYTP 231
YSP S YSPT P +SP+S Y+P
Sbjct: 1666 YSPTSPRYSPTSPAFSPTSP-SYSP 1689
Score = 119 bits (297), Expect = 2e-25
Identities = 64/123 (52%), Positives = 80/123 (65%), Gaps = 10/123 (8%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPS--------YNPQSAKYSP-SIAYSPSNARLSP 438
YSPTSP YSPTSP++SPTSPSY PTSP+ Y+P S ++SP S YSP++ SP
Sbjct: 1666 YSPTSPRYSPTSPAFSPTSPSYSPTSPAPFQATSPRYSPTSPQFSPTSPTYSPASPAYSP 1725
Query: 437 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGY 261
SP YSPTSP YSPTSP+YSPTSP+Y ++P + + A P + + GY G
Sbjct: 1726 TSPQYSPTSPAYSPTSPAYSPTSPAYGGAAPNGGTAQQQNGQARPGWGNTGGY-----GT 1780
Query: 260 SPS 252
SPS
Sbjct: 1781 SPS 1783
Score = 70.5 bits (171), Expect = 1e-10
Identities = 52/157 (33%), Positives = 70/157 (44%), Gaps = 57/157 (36%)
Frame = -3
Query: 530 SYGPTSPSYNPQSAKYS-PSIAYSPSNARLSPASPYSPTSP-NYSP-------------- 399
++ P S N + ++ SP + +SPA YSP+SP YSP
Sbjct: 1513 AFSPIQSSANDEGGNFAYMGYGQSPMHGGMSPAG-YSPSSPAGYSPTSPFAVTSPAYSPT 1571
Query: 398 ----------------------TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP--- 294
TSP+YSPTSP YSP+SP +SP+SP S +SP YSP
Sbjct: 1572 SPFAGAAAGAASPWVGRGGYGATSPAYSPTSPQYSPTSPQFSPTSPSFSPSSPTYSPASP 1631
Query: 293 ----------SAGYSPTLPGYSPSS------TGQYTP 231
++ YSPT P YSP+S + QY+P
Sbjct: 1632 AYGGAGAGNRASPYSPTSPAYSPTSPMGGITSPQYSP 1668
[129][TOP]
>UniRef100_O00820 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba
castellanii RepID=O00820_ACACA
Length = 1569
Score = 142 bits (359), Expect = 2e-32
Identities = 69/102 (67%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP SPGYSP YSP+SP Y P+SP Y+P S YSP S YSPS+ SP SP YSP
Sbjct: 1468 YSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPA 1527
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 291
SP+YSPTSP+YSPTSPSYSPSSP+YSP+SP S SP YSPS
Sbjct: 1528 SPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPS 1569
Score = 140 bits (354), Expect = 6e-32
Identities = 71/114 (62%), Positives = 80/114 (70%), Gaps = 2/114 (1%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP-YSPTS 414
SP+SP YSP SP YSP Y P+SP Y+P S YSPS YSP++ SP+SP YSPTS
Sbjct: 1462 SPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTS 1521
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPS 252
P YSP SPSYSPTSP+YSP+SP+YSPSSP S SP YSPT P YSPS
Sbjct: 1522 PKYSPASPSYSPTSPAYSPTSPSYSPSSPSYSPTSP------SYSPTSPSYSPS 1569
Score = 137 bits (344), Expect = 8e-31
Identities = 73/119 (61%), Positives = 85/119 (71%), Gaps = 3/119 (2%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP-YSPTSPNY 405
SPG SPS P+SPSY P SP Y+P A YSPS YSPS+ SP+SP YSP SP Y
Sbjct: 1453 SPGRGSFSPS--PSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGY 1510
Query: 404 SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 231
SP+SP+YSPTSP YSP+SP+YSP+SP S SP YSPS+ YSPT P YSP+S Y+P
Sbjct: 1511 SPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSP-SYSP 1568
Score = 100 bits (249), Expect = 9e-20
Identities = 69/137 (50%), Positives = 79/137 (57%), Gaps = 17/137 (12%)
Frame = -3
Query: 590 YSP--TSPG----YSPTSPSYSP----TSPSYGPTSPSYNPQSAKYSPSI---AYSPSNA 450
Y P TSPG Y + Y P T+P Y SP P +A YSP + +SP
Sbjct: 1400 YEPGATSPGSATPYMGSDERYLPNFFHTTPMYR-MSPGATP-AASYSPYVDFGEFSPGRG 1457
Query: 449 RL--SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GY 282
SP+SP YSP SP YSP YSP+SP YSPSSP YSPSSP S ASP YSPS+ Y
Sbjct: 1458 SFSPSPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAY 1517
Query: 281 SPTLPGYSPSSTGQYTP 231
SPT P YSP+S Y+P
Sbjct: 1518 SPTSPKYSPASP-SYSP 1533
Score = 82.0 bits (201), Expect = 3e-14
Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 9/123 (7%)
Frame = -3
Query: 572 GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSP-ASPYSPTSP----- 411
G T+ Y P + S G +P Y +Y P+ ++ R+SP A+P + SP
Sbjct: 1392 GGEATAMFYEPGATSPGSATP-YMGSDERYLPNFFHTTPMYRMSPGATPAASYSPYVDFG 1450
Query: 410 NYSPTSPSYSPT--SPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 240
+SP S+SP+ SPSYSP+SP YSP+ S +SP YSPS+ GYSP+ PGYSP+S G
Sbjct: 1451 EFSPGRGSFSPSPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPG- 1509
Query: 239 YTP 231
Y+P
Sbjct: 1510 YSP 1512
[130][TOP]
>UniRef100_O96452 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae
RepID=O96452_ANTLO
Length = 1553
Score = 140 bits (353), Expect = 7e-32
Identities = 71/101 (70%), Positives = 80/101 (79%), Gaps = 1/101 (0%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S AYSP+ SPA YSPTS
Sbjct: 1439 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT----SPA--YSPTS 1492
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 291
P YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y PS
Sbjct: 1493 PAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPVYRPS 1533
Score = 135 bits (339), Expect = 3e-30
Identities = 71/113 (62%), Positives = 82/113 (72%), Gaps = 2/113 (1%)
Frame = -3
Query: 581 TSPG-YSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNY 405
T+P YSPTSP+YSPTSP+Y PTSP+Y+P S YSP+ SPA YSPTSP Y
Sbjct: 1434 TTPSVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT----------SPA--YSPTSPAY 1481
Query: 404 SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P Y PS+
Sbjct: 1482 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPVYRPST 1534
Score = 108 bits (271), Expect = 2e-22
Identities = 63/113 (55%), Positives = 77/113 (68%), Gaps = 8/113 (7%)
Frame = -3
Query: 545 SPTSP-SYGPTSPSYNP-----QSAKYSPSIAYSPSNARLSPASP-YSPTSPNYSPTSPS 387
SP S YG +S ++P +A +PS+ YSP++ SP SP YSPTSP YSPTSP+
Sbjct: 1408 SPVSDVRYGSSSVPFSPIAAHGYAAGTTPSV-YSPTSPAYSPTSPAYSPTSPAYSPTSPA 1466
Query: 386 YSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1467 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1518
Score = 61.2 bits (147), Expect = 6e-08
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQS 492
YSPTSP YSPTSP+YSPTSP+Y PTSP Y P +
Sbjct: 1502 YSPTSPAYSPTSPAYSPTSPAYSPTSPVYRPST 1534
[131][TOP]
>UniRef100_Q9XZU9 DNA-directed RNA polymerase n=1 Tax=Drosophila subobscura
RepID=Q9XZU9_DROSU
Length = 1889
Score = 139 bits (351), Expect = 1e-31
Identities = 71/118 (60%), Positives = 81/118 (68%), Gaps = 4/118 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSP SP YSPTSPSYSP+SPSY PTSP Y+P S YSP S Y+P+ SP SP S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSP-SAGYSPTLPGYSPSS 249
P+YSP SP+YS T YSP+SPTYSP SP G+ SP Y+P S YSP P YSP+S
Sbjct: 1740 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTS 1797
Score = 137 bits (344), Expect = 8e-31
Identities = 82/184 (44%), Positives = 96/184 (52%), Gaps = 64/184 (34%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-------------------- 471
YSP+SP YSPTSP Y+ SP Y T+P++NPQS YSPS
Sbjct: 1598 YSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSP 1657
Query: 470 --------------AYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP 336
AYSPS+ SP SP YSPTSP+YSP+SPSYSPTSP YSPSSP+YSP
Sbjct: 1658 SFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSP 1717
Query: 335 SSPYSSGASPDYSPS---------------------AGYSPTLPGYSPSS--------TG 243
+SP + A+P YSP+ A YSPT P YSP S +
Sbjct: 1718 TSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSP 1777
Query: 242 QYTP 231
QYTP
Sbjct: 1778 QYTP 1781
Score = 136 bits (342), Expect = 1e-30
Identities = 75/144 (52%), Positives = 89/144 (61%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSN-------ARLSPAS 432
YSPTSP YSP+SPSYSPTSP+Y P +PSY+P S YS S YSP++ A+ SP S
Sbjct: 1701 YSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTS 1760
Query: 431 P-----------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
P Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS S
Sbjct: 1761 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTY 1820
Query: 302 YSPSAGYSPTLPGYSPSSTGQYTP 231
+ S YSP + YSPSST +Y+P
Sbjct: 1821 SATSPRYSPNMSIYSPSST-KYSP 1843
Score = 130 bits (328), Expect = 6e-29
Identities = 73/126 (57%), Positives = 84/126 (66%), Gaps = 12/126 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP 420
YSPTSP YSP SPSY SP SP Y P SP Y+P S KYSP S YSPS+ + SP++ YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 419 TSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA--GYSPTLP 267
T YS TSP YSP+S YSP+SPTY+P++ S SP YSP+A YSPT P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Query: 266 GYSPSS 249
YSPSS
Sbjct: 1876 AYSPSS 1881
Score = 115 bits (289), Expect = 2e-24
Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 9/97 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS------YGPTSPSYNPQSAKYSPSIA-YSPSNARLSPAS 432
YSP SP YSPTSP YSP+SP Y PT +Y+ S +YSP+++ YSPS+ + SP S
Sbjct: 1786 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 431 P-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 327
P Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 114 bits (285), Expect = 6e-24
Identities = 58/115 (50%), Positives = 73/115 (63%), Gaps = 16/115 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------- 429
SP SP Y+P SP YSP SP Y PTSP Y+P S ++SPS YSP+ + S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSPS 291
YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP + S
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 109 bits (272), Expect = 2e-22
Identities = 76/199 (38%), Positives = 88/199 (44%), Gaps = 79/199 (39%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPT----------------SPSYGPT------------SPSYNPQS 492
S SP +SP P SP+ SPSY PT SP+Y+P S
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 491 AKYSP----------------------SIAYSPSNARLSPASP----------------- 429
YSP S YSPS + SP SP
Sbjct: 1603 PNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGS 1662
Query: 428 ----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGY 282
YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S +SP YSP S Y
Sbjct: 1663 GSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNY 1722
Query: 281 SPTLPGYSPSSTG-QYTPH 228
+P P YSP+S +PH
Sbjct: 1723 TPATPSYSPTSPNYSASPH 1741
Score = 75.5 bits (184), Expect = 3e-12
Identities = 57/145 (39%), Positives = 78/145 (53%), Gaps = 27/145 (18%)
Frame = -3
Query: 584 PTSPGYSPTSPSY-SPTS--PSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPYSP 420
P +P + +P Y SP + P PS++P +A + ++ +SP++ SP+SP
Sbjct: 1505 PMTPWVNCNTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPS 1564
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLP-------- 267
SP Y P SPS SPSYSP+SP Y+ SSP GASP+YSPS+ YSPT P
Sbjct: 1565 MSPFY-PASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYAAPSPR 1618
Query: 266 -------------GYSPSSTGQYTP 231
GYSPS++G Y+P
Sbjct: 1619 YASTTPNFNPQSTGYSPSASG-YSP 1642
Score = 57.0 bits (136), Expect = 1e-06
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = -3
Query: 560 TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-Y 384
++PS +P P +P N + +Y +SP S +P P++SP++ S
Sbjct: 1498 STPSMTP------PMTPWVNCNTPRY-----FSPPGH----VSAMTPGGPSFSPSAASDA 1542
Query: 383 SPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
S SPS+SP+ P SPSSP S ASP SPS YSPT P Y+ SS G +P+
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPS--YSPTSPNYTASSPGGASPN 1597
Score = 54.3 bits (129), Expect = 7e-06
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPS 474
Y+PT+ YSPTSP YSPT+PS Y PTSP+Y+P S + S
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[132][TOP]
>UniRef100_Q9XZS2 DNA-directed RNA polymerase n=1 Tax=Drosophila madeirensis
RepID=Q9XZS2_DROMD
Length = 1889
Score = 139 bits (351), Expect = 1e-31
Identities = 71/118 (60%), Positives = 81/118 (68%), Gaps = 4/118 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSP SP YSPTSPSYSP+SPSY PTSP Y+P S YSP S Y+P+ SP SP S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSP-SAGYSPTLPGYSPSS 249
P+YSP SP+YS T YSP+SPTYSP SP G+ SP Y+P S YSP P YSP+S
Sbjct: 1740 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTS 1797
Score = 137 bits (344), Expect = 8e-31
Identities = 82/184 (44%), Positives = 96/184 (52%), Gaps = 64/184 (34%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-------------------- 471
YSP+SP YSPTSP Y+ SP Y T+P++NPQS YSPS
Sbjct: 1598 YSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSP 1657
Query: 470 --------------AYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP 336
AYSPS+ SP SP YSPTSP+YSP+SPSYSPTSP YSPSSP+YSP
Sbjct: 1658 SFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSP 1717
Query: 335 SSPYSSGASPDYSPS---------------------AGYSPTLPGYSPSS--------TG 243
+SP + A+P YSP+ A YSPT P YSP S +
Sbjct: 1718 TSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSP 1777
Query: 242 QYTP 231
QYTP
Sbjct: 1778 QYTP 1781
Score = 136 bits (342), Expect = 1e-30
Identities = 75/144 (52%), Positives = 89/144 (61%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSN-------ARLSPAS 432
YSPTSP YSP+SPSYSPTSP+Y P +PSY+P S YS S YSP++ A+ SP S
Sbjct: 1701 YSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTS 1760
Query: 431 P-----------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
P Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS S
Sbjct: 1761 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTY 1820
Query: 302 YSPSAGYSPTLPGYSPSSTGQYTP 231
+ S YSP + YSPSST +Y+P
Sbjct: 1821 SATSPRYSPNMSIYSPSST-KYSP 1843
Score = 130 bits (328), Expect = 6e-29
Identities = 73/126 (57%), Positives = 84/126 (66%), Gaps = 12/126 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP 420
YSPTSP YSP SPSY SP SP Y P SP Y+P S KYSP S YSPS+ + SP++ YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 419 TSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA--GYSPTLP 267
T YS TSP YSP+S YSP+SPTY+P++ S SP YSP+A YSPT P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Query: 266 GYSPSS 249
YSPSS
Sbjct: 1876 AYSPSS 1881
Score = 115 bits (289), Expect = 2e-24
Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 9/97 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS------YGPTSPSYNPQSAKYSPSIA-YSPSNARLSPAS 432
YSP SP YSPTSP YSP+SP Y PT +Y+ S +YSP+++ YSPS+ + SP S
Sbjct: 1786 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 431 P-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 327
P Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 114 bits (285), Expect = 6e-24
Identities = 58/115 (50%), Positives = 73/115 (63%), Gaps = 16/115 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------- 429
SP SP Y+P SP YSP SP Y PTSP Y+P S ++SPS YSP+ + S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSPS 291
YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP + S
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 109 bits (272), Expect = 2e-22
Identities = 76/199 (38%), Positives = 88/199 (44%), Gaps = 79/199 (39%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPT----------------SPSYGPT------------SPSYNPQS 492
S SP +SP P SP+ SPSY PT SP+Y+P S
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 491 AKYSP----------------------SIAYSPSNARLSPASP----------------- 429
YSP S YSPS + SP SP
Sbjct: 1603 PNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGS 1662
Query: 428 ----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGY 282
YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S +SP YSP S Y
Sbjct: 1663 GSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNY 1722
Query: 281 SPTLPGYSPSSTG-QYTPH 228
+P P YSP+S +PH
Sbjct: 1723 TPATPSYSPTSPNYSASPH 1741
Score = 75.5 bits (184), Expect = 3e-12
Identities = 57/145 (39%), Positives = 78/145 (53%), Gaps = 27/145 (18%)
Frame = -3
Query: 584 PTSPGYSPTSPSY-SPTS--PSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPYSP 420
P +P + +P Y SP + P PS++P +A + ++ +SP++ SP+SP
Sbjct: 1505 PMTPWVNCNTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPS 1564
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLP-------- 267
SP Y P SPS SPSYSP+SP Y+ SSP GASP+YSPS+ YSPT P
Sbjct: 1565 MSPFY-PASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYAAPSPR 1618
Query: 266 -------------GYSPSSTGQYTP 231
GYSPS++G Y+P
Sbjct: 1619 YASTTPNFNPQSTGYSPSASG-YSP 1642
Score = 57.0 bits (136), Expect = 1e-06
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = -3
Query: 560 TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-Y 384
++PS +P P +P N + +Y +SP S +P P++SP++ S
Sbjct: 1498 STPSMTP------PMTPWVNCNTPRY-----FSPPGH----VSAMTPGGPSFSPSAASDA 1542
Query: 383 SPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
S SPS+SP+ P SPSSP S ASP SPS YSPT P Y+ SS G +P+
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPS--YSPTSPNYTASSPGGASPN 1597
Score = 54.3 bits (129), Expect = 7e-06
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPS 474
Y+PT+ YSPTSP YSPT+PS Y PTSP+Y+P S + S
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[133][TOP]
>UniRef100_B3MQ29 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MQ29_DROAN
Length = 1889
Score = 139 bits (351), Expect = 1e-31
Identities = 75/149 (50%), Positives = 90/149 (60%), Gaps = 29/149 (19%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA------------------- 468
YSP+SP YSPTSP Y+ TSP Y T+P++NPQS YSPS +
Sbjct: 1598 YSPSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNYQSSP 1657
Query: 467 ---------YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 315
YSP NA +S YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S
Sbjct: 1658 SFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSP 1717
Query: 314 ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP+Y+P + YSPT P YS S Y+P
Sbjct: 1718 TSPNYTPVTPSYSPTSPNYSASP--HYSP 1744
Score = 137 bits (346), Expect = 5e-31
Identities = 71/118 (60%), Positives = 80/118 (67%), Gaps = 4/118 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSP SP YSPTSPSYSP+SPSY PTSP Y+P S YSP S Y+P SP SP S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSP-SAGYSPTLPGYSPSS 249
P+YSP SP+YS T YSP+SPTYSP SP G+ SP Y+P S YSP P YSP+S
Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTS 1797
Score = 137 bits (344), Expect = 8e-31
Identities = 75/144 (52%), Positives = 88/144 (61%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS--------------IAYSPSN 453
YSPTSP YSPTSPSYSPTSP+Y P +PSY+P S YS S + YSP++
Sbjct: 1701 YSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTS 1760
Query: 452 ARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS S
Sbjct: 1761 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTY 1820
Query: 302 YSPSAGYSPTLPGYSPSSTGQYTP 231
+ S YSP + YSPSST +Y+P
Sbjct: 1821 SATSPRYSPNMSIYSPSST-KYSP 1843
Score = 130 bits (328), Expect = 6e-29
Identities = 73/126 (57%), Positives = 84/126 (66%), Gaps = 12/126 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP 420
YSPTSP YSP SPSY SP SP Y P SP Y+P S KYSP S YSPS+ + SP++ YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 419 TSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA--GYSPTLP 267
T YS TSP YSP+S YSP+SPTY+P++ S SP YSP+A YSPT P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Query: 266 GYSPSS 249
YSPSS
Sbjct: 1876 AYSPSS 1881
Score = 115 bits (289), Expect = 2e-24
Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 9/97 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS------YGPTSPSYNPQSAKYSPSIA-YSPSNARLSPAS 432
YSP SP YSPTSP YSP+SP Y PT +Y+ S +YSP+++ YSPS+ + SP S
Sbjct: 1786 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 431 P-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 327
P Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 114 bits (285), Expect = 6e-24
Identities = 58/115 (50%), Positives = 73/115 (63%), Gaps = 16/115 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------- 429
SP SP Y+P SP YSP SP Y PTSP Y+P S ++SPS YSP+ + S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSPS 291
YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP + S
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 110 bits (274), Expect = 1e-22
Identities = 76/199 (38%), Positives = 88/199 (44%), Gaps = 79/199 (39%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPT----------------SPSYGPT------------SPSYNPQS 492
S SP +SP P SP+ SPSY PT SP+Y+P S
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 491 AKYSP----------------------SIAYSPSNARLSPASP----------------- 429
YSP S YSPS++ SP SP
Sbjct: 1603 PNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNYQSSPSFAGS 1662
Query: 428 ----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGY 282
YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP S Y
Sbjct: 1663 GSNMYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNY 1722
Query: 281 SPTLPGYSPSSTG-QYTPH 228
+P P YSP+S +PH
Sbjct: 1723 TPVTPSYSPTSPNYSASPH 1741
Score = 99.8 bits (247), Expect = 1e-19
Identities = 58/125 (46%), Positives = 77/125 (61%), Gaps = 5/125 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSP--SYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNA--RLSPASP-Y 426
+SP PG SP+SP S SP P+ SPSY+P S Y+ S SP A SP+SP Y
Sbjct: 1549 WSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTAS---SPGGASPNYSPSSPNY 1605
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSST 246
SPTSP Y+ TSP Y+ T+P+++P S YSPSS S SP YSP++ Y + P ++ S +
Sbjct: 1606 SPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNYQSS-PSFAGSGS 1664
Query: 245 GQYTP 231
Y+P
Sbjct: 1665 NMYSP 1669
Score = 76.6 bits (187), Expect = 1e-12
Identities = 58/145 (40%), Positives = 78/145 (53%), Gaps = 27/145 (18%)
Frame = -3
Query: 584 PTSPGYSPTSPSY-SPTS--PSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPYSP 420
P +P + +P Y SP + P PS++P +A + ++ +SP++ SP+SP
Sbjct: 1505 PMTPWVNCNTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPS 1564
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLP-------- 267
SP Y P SPS SPSYSP+SP Y+ SSP GASP+YSPS+ YSPT P
Sbjct: 1565 MSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYATTSPR 1618
Query: 266 -------------GYSPSSTGQYTP 231
GYSPSS+G Y+P
Sbjct: 1619 YASTTPNFNPQSTGYSPSSSG-YSP 1642
Score = 56.6 bits (135), Expect = 1e-06
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = -3
Query: 560 TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-Y 384
++PS +P P +P N + +Y +SP S +P P++SP++ S
Sbjct: 1498 STPSMTP------PMTPWVNCNTPRY-----FSPPGH----VSAMTPGGPSFSPSAASDA 1542
Query: 383 SPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
S SPS+SP+ P SPSSP S ASP SPS YSPT P Y+ SS G +P+
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPTSPNYTASSPGGASPN 1597
Score = 54.3 bits (129), Expect = 7e-06
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPS 474
Y+PT+ YSPTSP YSPT+PS Y PTSP+Y+P S + S
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[134][TOP]
>UniRef100_Q9XZU8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila
pseudoobscura pseudoobscura RepID=Q9XZU8_DROPS
Length = 1811
Score = 139 bits (350), Expect = 2e-31
Identities = 71/118 (60%), Positives = 81/118 (68%), Gaps = 4/118 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSP SP YSPTSPSYSP+SPSY PTSP Y+P S YSP S Y+P+ SP SP S
Sbjct: 1602 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1661
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSP-SAGYSPTLPGYSPSS 249
P+YSP SP+YS T YSP+SPTYSP SP G+ SP Y+P S YSP P YSP+S
Sbjct: 1662 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTS 1719
Score = 137 bits (346), Expect = 5e-31
Identities = 76/144 (52%), Positives = 89/144 (61%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSN-------ARLSPAS 432
YSPTSP YSPTSPSYSPTSP+Y P +PSY+P S YS S YSP++ A+ SP S
Sbjct: 1623 YSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTS 1682
Query: 431 P-----------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
P Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS S
Sbjct: 1683 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTY 1742
Query: 302 YSPSAGYSPTLPGYSPSSTGQYTP 231
+ S YSP + YSPSST +Y+P
Sbjct: 1743 SATSPRYSPNMSIYSPSST-KYSP 1765
Score = 137 bits (345), Expect = 6e-31
Identities = 73/149 (48%), Positives = 89/149 (59%), Gaps = 29/149 (19%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA------------------- 468
YSP+SP YSPTSP Y+ SP Y T+P++NPQS YSPS +
Sbjct: 1520 YSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSP 1579
Query: 467 ---------YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 315
YSP NA ++ YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S
Sbjct: 1580 SFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSP 1639
Query: 314 ASPDYSPSA-GYSPTLPGYSPSSTGQYTP 231
SP+Y+P+ YSPT P YS S Y+P
Sbjct: 1640 TSPNYTPATPSYSPTSPNYSASP--HYSP 1666
Score = 130 bits (328), Expect = 6e-29
Identities = 73/126 (57%), Positives = 84/126 (66%), Gaps = 12/126 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP 420
YSPTSP YSP SPSY SP SP Y P SP Y+P S KYSP S YSPS+ + SP++ YSP
Sbjct: 1678 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1737
Query: 419 TSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA--GYSPTLP 267
T YS TSP YSP+S YSP+SPTY+P++ S SP YSP+A YSPT P
Sbjct: 1738 TGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1797
Query: 266 GYSPSS 249
YSPSS
Sbjct: 1798 AYSPSS 1803
Score = 115 bits (289), Expect = 2e-24
Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 9/97 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS------YGPTSPSYNPQSAKYSPSIA-YSPSNARLSPAS 432
YSP SP YSPTSP YSP+SP Y PT +Y+ S +YSP+++ YSPS+ + SP S
Sbjct: 1708 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1767
Query: 431 P-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 327
P Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1768 PTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1804
Score = 114 bits (285), Expect = 6e-24
Identities = 58/115 (50%), Positives = 73/115 (63%), Gaps = 16/115 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------- 429
SP SP Y+P SP YSP SP Y PTSP Y+P S ++SPS YSP+ + S SP
Sbjct: 1695 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1754
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSPS 291
YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP + S
Sbjct: 1755 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1809
Score = 108 bits (271), Expect = 2e-22
Identities = 76/199 (38%), Positives = 87/199 (43%), Gaps = 79/199 (39%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPT----------------SPSYGPT------------SPSYNPQS 492
S SP +SP P SP+ SPSY PT SP+Y+P S
Sbjct: 1465 SGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1524
Query: 491 AKYSP----------------------SIAYSPSNARLSPASP----------------- 429
YSP S YSPS + SP SP
Sbjct: 1525 PNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGS 1584
Query: 428 ----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGY 282
YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP S Y
Sbjct: 1585 GSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNY 1644
Query: 281 SPTLPGYSPSSTG-QYTPH 228
+P P YSP+S +PH
Sbjct: 1645 TPATPSYSPTSPNYSASPH 1663
Score = 76.3 bits (186), Expect = 2e-12
Identities = 51/118 (43%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
Frame = -3
Query: 584 PTSPGYSPTSPSY-SPTS--PSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPYSP 420
P +P + +P Y SP + P PS++P +A + ++ +SP++ SP+SP
Sbjct: 1427 PMTPWVNCNTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPS 1486
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSS 249
SP Y P SPS SPSYSP+SP Y+ SSP GASP+YSPS+ YSPT P Y+ +S
Sbjct: 1487 MSPYY-PASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYAAAS 1538
Score = 57.0 bits (136), Expect = 1e-06
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = -3
Query: 560 TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-Y 384
++PS +P P +P N + +Y +SP S +P P++SP++ S
Sbjct: 1420 STPSMTP------PMTPWVNCNTPRY-----FSPPGH----VSAMTPGGPSFSPSAASDA 1464
Query: 383 SPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
S SPS+SP+ P SPSSP S ASP SPS YSPT P Y+ SS G +P+
Sbjct: 1465 SGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPS--YSPTSPNYTASSPGGASPN 1519
Score = 54.3 bits (129), Expect = 7e-06
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPS 474
Y+PT+ YSPTSP YSPT+PS Y PTSP+Y+P S + S
Sbjct: 1770 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1809
[135][TOP]
>UniRef100_Q9XZS1 DNA-directed RNA polymerase n=1 Tax=Drosophila guanche
RepID=Q9XZS1_DROGU
Length = 1889
Score = 139 bits (350), Expect = 2e-31
Identities = 71/118 (60%), Positives = 81/118 (68%), Gaps = 4/118 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSP SP YSPTSPSYSP+SPSY PTSP Y+P S YSP S Y+P+ SP SP S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSP-SAGYSPTLPGYSPSS 249
P+YSP SP+YS T YSP+SPTYSP SP G+ SP Y+P S YSP P YSP+S
Sbjct: 1740 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTS 1797
Score = 137 bits (346), Expect = 5e-31
Identities = 76/144 (52%), Positives = 89/144 (61%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSN-------ARLSPAS 432
YSPTSP YSPTSPSYSPTSP+Y P +PSY+P S YS S YSP++ A+ SP S
Sbjct: 1701 YSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTS 1760
Query: 431 P-----------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
P Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS S
Sbjct: 1761 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTY 1820
Query: 302 YSPSAGYSPTLPGYSPSSTGQYTP 231
+ S YSP + YSPSST +Y+P
Sbjct: 1821 SATSPRYSPNMSIYSPSST-KYSP 1843
Score = 137 bits (344), Expect = 8e-31
Identities = 73/149 (48%), Positives = 89/149 (59%), Gaps = 29/149 (19%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA------------------- 468
YSP+SP YSPTSP Y+ SP Y T+P++NPQS YSPS +
Sbjct: 1598 YSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSP 1657
Query: 467 ---------YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 315
YSP NA ++ YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S
Sbjct: 1658 SFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSP 1717
Query: 314 ASPDYSPSA-GYSPTLPGYSPSSTGQYTP 231
SP+Y+P+ YSPT P YS S Y+P
Sbjct: 1718 TSPNYTPATPSYSPTSPNYSASP--HYSP 1744
Score = 130 bits (328), Expect = 6e-29
Identities = 73/126 (57%), Positives = 84/126 (66%), Gaps = 12/126 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP 420
YSPTSP YSP SPSY SP SP Y P SP Y+P S KYSP S YSPS+ + SP++ YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 419 TSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA--GYSPTLP 267
T YS TSP YSP+S YSP+SPTY+P++ S SP YSP+A YSPT P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Query: 266 GYSPSS 249
YSPSS
Sbjct: 1876 AYSPSS 1881
Score = 115 bits (289), Expect = 2e-24
Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 9/97 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS------YGPTSPSYNPQSAKYSPSIA-YSPSNARLSPAS 432
YSP SP YSPTSP YSP+SP Y PT +Y+ S +YSP+++ YSPS+ + SP S
Sbjct: 1786 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 431 P-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 327
P Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 114 bits (285), Expect = 6e-24
Identities = 58/115 (50%), Positives = 73/115 (63%), Gaps = 16/115 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------- 429
SP SP Y+P SP YSP SP Y PTSP Y+P S ++SPS YSP+ + S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSPS 291
YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP + S
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 108 bits (271), Expect = 2e-22
Identities = 76/199 (38%), Positives = 87/199 (43%), Gaps = 79/199 (39%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPT----------------SPSYGPT------------SPSYNPQS 492
S SP +SP P SP+ SPSY PT SP+Y+P S
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 491 AKYSP----------------------SIAYSPSNARLSPASP----------------- 429
YSP S YSPS + SP SP
Sbjct: 1603 PNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGS 1662
Query: 428 ----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGY 282
YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP S Y
Sbjct: 1663 GSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNY 1722
Query: 281 SPTLPGYSPSSTG-QYTPH 228
+P P YSP+S +PH
Sbjct: 1723 TPATPSYSPTSPNYSASPH 1741
Score = 75.9 bits (185), Expect = 2e-12
Identities = 57/145 (39%), Positives = 78/145 (53%), Gaps = 27/145 (18%)
Frame = -3
Query: 584 PTSPGYSPTSPSY-SPTS--PSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPYSP 420
P +P + +P Y SP + P PS++P +A + ++ +SP++ SP+SP
Sbjct: 1505 PMTPWVNCNTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPS 1564
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLP-------- 267
SP Y P SPS SPSYSP+SP Y+ SSP GASP+YSPS+ YSPT P
Sbjct: 1565 MSPYY-PASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYAAPSPR 1618
Query: 266 -------------GYSPSSTGQYTP 231
GYSPS++G Y+P
Sbjct: 1619 YASTTPNFNPQSTGYSPSASG-YSP 1642
Score = 57.0 bits (136), Expect = 1e-06
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = -3
Query: 560 TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-Y 384
++PS +P P +P N + +Y +SP S +P P++SP++ S
Sbjct: 1498 STPSMTP------PMTPWVNCNTPRY-----FSPPGH----VSAMTPGGPSFSPSAASDA 1542
Query: 383 SPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
S SPS+SP+ P SPSSP S ASP SPS YSPT P Y+ SS G +P+
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPS--YSPTSPNYTASSPGGASPN 1597
Score = 54.3 bits (129), Expect = 7e-06
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPS 474
Y+PT+ YSPTSP YSPT+PS Y PTSP+Y+P S + S
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[136][TOP]
>UniRef100_Q29IN2 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q29IN2_DROPS
Length = 1889
Score = 139 bits (350), Expect = 2e-31
Identities = 71/118 (60%), Positives = 81/118 (68%), Gaps = 4/118 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSP SP YSPTSPSYSP+SPSY PTSP Y+P S YSP S Y+P+ SP SP S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSP-SAGYSPTLPGYSPSS 249
P+YSP SP+YS T YSP+SPTYSP SP G+ SP Y+P S YSP P YSP+S
Sbjct: 1740 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTS 1797
Score = 137 bits (346), Expect = 5e-31
Identities = 76/144 (52%), Positives = 89/144 (61%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSN-------ARLSPAS 432
YSPTSP YSPTSPSYSPTSP+Y P +PSY+P S YS S YSP++ A+ SP S
Sbjct: 1701 YSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTS 1760
Query: 431 P-----------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
P Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS S
Sbjct: 1761 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTY 1820
Query: 302 YSPSAGYSPTLPGYSPSSTGQYTP 231
+ S YSP + YSPSST +Y+P
Sbjct: 1821 SATSPRYSPNMSIYSPSST-KYSP 1843
Score = 137 bits (345), Expect = 6e-31
Identities = 73/149 (48%), Positives = 89/149 (59%), Gaps = 29/149 (19%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA------------------- 468
YSP+SP YSPTSP Y+ SP Y T+P++NPQS YSPS +
Sbjct: 1598 YSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSP 1657
Query: 467 ---------YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 315
YSP NA ++ YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S
Sbjct: 1658 SFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSP 1717
Query: 314 ASPDYSPSA-GYSPTLPGYSPSSTGQYTP 231
SP+Y+P+ YSPT P YS S Y+P
Sbjct: 1718 TSPNYTPATPSYSPTSPNYSASP--HYSP 1744
Score = 130 bits (328), Expect = 6e-29
Identities = 73/126 (57%), Positives = 84/126 (66%), Gaps = 12/126 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP 420
YSPTSP YSP SPSY SP SP Y P SP Y+P S KYSP S YSPS+ + SP++ YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 419 TSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA--GYSPTLP 267
T YS TSP YSP+S YSP+SPTY+P++ S SP YSP+A YSPT P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Query: 266 GYSPSS 249
YSPSS
Sbjct: 1876 AYSPSS 1881
Score = 115 bits (289), Expect = 2e-24
Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 9/97 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS------YGPTSPSYNPQSAKYSPSIA-YSPSNARLSPAS 432
YSP SP YSPTSP YSP+SP Y PT +Y+ S +YSP+++ YSPS+ + SP S
Sbjct: 1786 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 431 P-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 327
P Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 114 bits (285), Expect = 6e-24
Identities = 58/115 (50%), Positives = 73/115 (63%), Gaps = 16/115 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------- 429
SP SP Y+P SP YSP SP Y PTSP Y+P S ++SPS YSP+ + S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSPS 291
YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP + S
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 108 bits (271), Expect = 2e-22
Identities = 76/199 (38%), Positives = 87/199 (43%), Gaps = 79/199 (39%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPT----------------SPSYGPT------------SPSYNPQS 492
S SP +SP P SP+ SPSY PT SP+Y+P S
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 491 AKYSP----------------------SIAYSPSNARLSPASP----------------- 429
YSP S YSPS + SP SP
Sbjct: 1603 PNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGS 1662
Query: 428 ----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGY 282
YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP S Y
Sbjct: 1663 GSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNY 1722
Query: 281 SPTLPGYSPSSTG-QYTPH 228
+P P YSP+S +PH
Sbjct: 1723 TPATPSYSPTSPNYSASPH 1741
Score = 76.3 bits (186), Expect = 2e-12
Identities = 51/118 (43%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
Frame = -3
Query: 584 PTSPGYSPTSPSY-SPTS--PSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPYSP 420
P +P + +P Y SP + P PS++P +A + ++ +SP++ SP+SP
Sbjct: 1505 PMTPWVNCNTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPS 1564
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSS 249
SP Y P SPS SPSYSP+SP Y+ SSP GASP+YSPS+ YSPT P Y+ +S
Sbjct: 1565 MSPYY-PASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYAAAS 1616
Score = 57.0 bits (136), Expect = 1e-06
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = -3
Query: 560 TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-Y 384
++PS +P P +P N + +Y +SP S +P P++SP++ S
Sbjct: 1498 STPSMTP------PMTPWVNCNTPRY-----FSPPGH----VSAMTPGGPSFSPSAASDA 1542
Query: 383 SPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
S SPS+SP+ P SPSSP S ASP SPS YSPT P Y+ SS G +P+
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPS--YSPTSPNYTASSPGGASPN 1597
Score = 54.3 bits (129), Expect = 7e-06
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPS 474
Y+PT+ YSPTSP YSPT+PS Y PTSP+Y+P S + S
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[137][TOP]
>UniRef100_B4H2R8 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4H2R8_DROPE
Length = 1804
Score = 139 bits (350), Expect = 2e-31
Identities = 71/118 (60%), Positives = 81/118 (68%), Gaps = 4/118 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSP SP YSPTSPSYSP+SPSY PTSP Y+P S YSP S Y+P+ SP SP S
Sbjct: 1614 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1673
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSP-SAGYSPTLPGYSPSS 249
P+YSP SP+YS T YSP+SPTYSP SP G+ SP Y+P S YSP P YSP+S
Sbjct: 1674 PHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTS 1731
Score = 137 bits (346), Expect = 5e-31
Identities = 76/144 (52%), Positives = 89/144 (61%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSN-------ARLSPAS 432
YSPTSP YSPTSPSYSPTSP+Y P +PSY+P S YS S YSP++ A+ SP S
Sbjct: 1635 YSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTS 1694
Query: 431 P-----------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
P Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS S
Sbjct: 1695 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTY 1754
Query: 302 YSPSAGYSPTLPGYSPSSTGQYTP 231
+ S YSP + YSPSST +Y+P
Sbjct: 1755 SATSPRYSPNMSIYSPSST-KYSP 1777
Score = 137 bits (345), Expect = 6e-31
Identities = 73/149 (48%), Positives = 89/149 (59%), Gaps = 29/149 (19%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA------------------- 468
YSP+SP YSPTSP Y+ SP Y T+P++NPQS YSPS +
Sbjct: 1532 YSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSP 1591
Query: 467 ---------YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 315
YSP NA ++ YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S
Sbjct: 1592 SFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSP 1651
Query: 314 ASPDYSPSA-GYSPTLPGYSPSSTGQYTP 231
SP+Y+P+ YSPT P YS S Y+P
Sbjct: 1652 TSPNYTPATPSYSPTSPNYSASP--HYSP 1678
Score = 133 bits (334), Expect = 1e-29
Identities = 75/147 (51%), Positives = 89/147 (60%), Gaps = 30/147 (20%)
Frame = -3
Query: 578 SPGYSPTSPSYSPT-------SPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPAS--- 432
SP YSP+SP+YSPT SP Y T+P++NPQS YSPS + YSP++ SP S
Sbjct: 1529 SPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFP 1588
Query: 431 -----------------PYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP
Sbjct: 1589 SSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPS 1648
Query: 302 YSP-SAGYSPTLPGYSPSSTG-QYTPH 228
YSP S Y+P P YSP+S +PH
Sbjct: 1649 YSPTSPNYTPATPSYSPTSPNYSASPH 1675
Score = 119 bits (298), Expect = 2e-25
Identities = 65/110 (59%), Positives = 74/110 (67%), Gaps = 4/110 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP 420
YSPTSP YSP SPSY SP SP Y P SP Y+P S KYSP S YSPS+ + SP++ YSP
Sbjct: 1690 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1749
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPT 273
T YS TSP YSP YSPSS YSP+SP + + +YSP S YSPT
Sbjct: 1750 TGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSLMYSPT 1799
Score = 88.2 bits (217), Expect = 4e-16
Identities = 48/99 (48%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Frame = -3
Query: 524 GPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPT 345
G ++PS P SPS YSP++ + +SP SPNYSP+SP+YSPTSP Y+ +SP
Sbjct: 1496 GGSTPSMTPPMTPVSPS--YSPTSPNYTASSP-GGASPNYSPSSPNYSPTSPLYAAASPR 1552
Query: 344 YSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 231
Y+ ++P + S YSPSA GYSPT P YSP+S +P
Sbjct: 1553 YASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSP 1591
[138][TOP]
>UniRef100_A7EKT1 DNA-directed RNA polymerase n=2 Tax=Sclerotinia sclerotiorum
RepID=A7EKT1_SCLS1
Length = 1746
Score = 139 bits (350), Expect = 2e-31
Identities = 77/133 (57%), Positives = 91/133 (68%), Gaps = 19/133 (14%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSY-GPTSPSYNPQSAKYSPS---IAYSPSNARLSPASP-Y 426
+SP SP ++PTSP+YSPTSPS+ PTSPSY+P S YSP+ I SP++ SP SP Y
Sbjct: 1608 FSPVSPAFTPTSPAYSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSY 1667
Query: 425 SPTSPNYSPTSPSY-----------SPTSPSYSPSSPTYSPSSPYSSG--ASPDYSP-SA 288
SPTSPNYSPTSP+Y SPTSP YSP+SP +SPSSP G SP YSP S
Sbjct: 1668 SPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTSPNWSPSSPQHQGNNTSPKYSPTSP 1727
Query: 287 GYSPTLPGYSPSS 249
YSPT P +SP+S
Sbjct: 1728 SYSPTSPNFSPTS 1740
Score = 124 bits (312), Expect = 4e-27
Identities = 73/141 (51%), Positives = 90/141 (63%), Gaps = 27/141 (19%)
Frame = -3
Query: 590 YSPTSP-GYSPTSPSYSPTSPSYGPTSP----------SYNPQSAKYSPSIAYSPSNARL 444
YSPTSP SPTSP +SP+SP Y PTSP S +P+ + SP A++P++
Sbjct: 1565 YSPTSPFNASPTSPQFSPSSPGYSPTSPMMGGGASPGYSVSPRFSPVSP--AFTPTSPAY 1622
Query: 443 SPASP--YSPTSPNYSPTSPSY---------SPTSPSYSPSSPTYSPSSPYSSGASPDY- 300
SP SP SPTSP+YSPTSP+Y SPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1623 SPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYA 1682
Query: 299 ----SPSAGYSPTLPGYSPSS 249
SP +G SPT P YSP+S
Sbjct: 1683 GNKVSPGSGLSPTSPVYSPTS 1703
Score = 118 bits (296), Expect = 3e-25
Identities = 65/108 (60%), Positives = 76/108 (70%), Gaps = 13/108 (12%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNA--RLSPASPYS 423
YSPTSP YSPTSP+ SPTSPSY PTSPSY+P S YSP+ SP+ A ++SP S S
Sbjct: 1637 YSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPT---SPNYAGNKVSPGSGLS 1693
Query: 422 PTSPNYSPTSPSYSP---------TSPSYSPSSPTYSPSSPYSSGASP 306
PTSP YSPTSP++SP TSP YSP+SP+YSP+SP S SP
Sbjct: 1694 PTSPVYSPTSPNWSPSSPQHQGNNTSPKYSPTSPSYSPTSPNFSPTSP 1741
Score = 73.6 bits (179), Expect = 1e-11
Identities = 49/127 (38%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPT-SPSYGPTSPSYNPQSAKYSPSIAY----SPSNA-RLSPASPY 426
SP + G +P Y SP S + + + +Y S+ + SP A SP Y
Sbjct: 1506 SPLNEGGYLGTPDYGAAFSPIQSAGSETPSGFATEYGGSLGFGGGMSPYGAGSRSPGGGY 1565
Query: 425 SPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS 252
SPTSP N SPTSP +SP+SP YSP+SP + SP +SP S ++PT P YSP+
Sbjct: 1566 SPTSPFNASPTSPQFSPSSPGYSPTSPMMGGGASPGYSVSPRFSPVSPAFTPTSPAYSPT 1625
Query: 251 STGQYTP 231
S +P
Sbjct: 1626 SPSFVSP 1632
[139][TOP]
>UniRef100_A6SI63 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10
RepID=A6SI63_BOTFB
Length = 1742
Score = 139 bits (350), Expect = 2e-31
Identities = 77/133 (57%), Positives = 91/133 (68%), Gaps = 19/133 (14%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSY-GPTSPSYNPQSAKYSPS---IAYSPSNARLSPASP-Y 426
+SP SP ++PTSP+YSPTSPS+ PTSPSY+P S YSP+ I SP++ SP SP Y
Sbjct: 1604 FSPVSPAFTPTSPAYSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSY 1663
Query: 425 SPTSPNYSPTSPSY-----------SPTSPSYSPSSPTYSPSSPYSSG--ASPDYSP-SA 288
SPTSPNYSPTSP+Y SPTSP YSP+SP +SPSSP G SP YSP S
Sbjct: 1664 SPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTSPNWSPSSPQHQGNSTSPKYSPTSP 1723
Query: 287 GYSPTLPGYSPSS 249
YSPT P +SP+S
Sbjct: 1724 SYSPTSPNFSPTS 1736
Score = 123 bits (308), Expect = 1e-26
Identities = 72/139 (51%), Positives = 90/139 (64%), Gaps = 25/139 (17%)
Frame = -3
Query: 590 YSPTSP-GYSPTSPSYSPTSPSYGPTSPSYN-------PQSAKYSP-SIAYSPSNARLSP 438
YSPTSP SP+SP++SP+SP Y PTSP S ++SP S A++P++ SP
Sbjct: 1561 YSPTSPFNASPSSPNFSPSSPGYSPTSPMMGGGASPGYAVSPRFSPVSPAFTPTSPAYSP 1620
Query: 437 ASP--YSPTSPNYSPTSPSY---------SPTSPSYSPSSPTYSPSSPYSSGASPDY--- 300
SP SPTSP+YSPTSP+Y SPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1621 TSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGN 1680
Query: 299 --SPSAGYSPTLPGYSPSS 249
SP +G SPT P YSP+S
Sbjct: 1681 KVSPGSGLSPTSPVYSPTS 1699
Score = 118 bits (296), Expect = 3e-25
Identities = 65/108 (60%), Positives = 76/108 (70%), Gaps = 13/108 (12%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNA--RLSPASPYS 423
YSPTSP YSPTSP+ SPTSPSY PTSPSY+P S YSP+ SP+ A ++SP S S
Sbjct: 1633 YSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPT---SPNYAGNKVSPGSGLS 1689
Query: 422 PTSPNYSPTSPSYSP---------TSPSYSPSSPTYSPSSPYSSGASP 306
PTSP YSPTSP++SP TSP YSP+SP+YSP+SP S SP
Sbjct: 1690 PTSPVYSPTSPNWSPSSPQHQGNSTSPKYSPTSPSYSPTSPNFSPTSP 1737
Score = 68.6 bits (166), Expect = 4e-10
Identities = 51/130 (39%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPT-SPSYGPTSPSYNPQSAKYSPSIAYSPSNA-RLSPASPYSPTS 414
SP + G +P Y SP S + + + +YS SP A SP YSPTS
Sbjct: 1506 SPLNEGGYLGTPDYGAQFSPIQSAGSDTPSGFATEYSGLGGMSPYAAGSRSPGGGYSPTS 1565
Query: 413 P-NYSPTSPSYSPTSPSYSPSSPTY----SPS---SPYSSGASPDYSP-SAGYSPTLPGY 261
P N SP+SP++SP+SP YSP+SP SP SP S SP ++P S YSPT P +
Sbjct: 1566 PFNASPSSPNFSPSSPGYSPTSPMMGGGASPGYAVSPRFSPVSPAFTPTSPAYSPTSPSF 1625
Query: 260 SPSSTGQYTP 231
++ Y+P
Sbjct: 1626 VSPTSPSYSP 1635
[140][TOP]
>UniRef100_B4MAN9 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4MAN9_DROVI
Length = 1889
Score = 139 bits (349), Expect = 2e-31
Identities = 76/144 (52%), Positives = 89/144 (61%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS--------------IAYSPSN 453
YSPTSP YSPTSPSYSPTSP+Y P +PSY+P S YS S + YSP++
Sbjct: 1701 YSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTS 1760
Query: 452 ARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
SP SP Y+P SP YSPTSP YSPTSP YSPSSP +SPS+ YS S
Sbjct: 1761 PTYSPPSPSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSPTGSTY 1820
Query: 302 YSPSAGYSPTLPGYSPSSTGQYTP 231
+ S YSP + YSPSST +Y+P
Sbjct: 1821 SATSPRYSPNMSIYSPSST-KYSP 1843
Score = 135 bits (340), Expect = 2e-30
Identities = 70/118 (59%), Positives = 80/118 (67%), Gaps = 4/118 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YS SP YSP SPSYSP+SPSY PTSP Y+P S YSP S Y+P+ SP SP S
Sbjct: 1680 YSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSAS 1739
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSP-SAGYSPTLPGYSPSS 249
P+YSP SP+YS T YSP+SPTYSP SP G+ SP Y+P S YSPT P YSP+S
Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPTSPKYSPTS 1797
Score = 132 bits (331), Expect = 3e-29
Identities = 73/144 (50%), Positives = 87/144 (60%), Gaps = 23/144 (15%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPAS------ 432
YSP+SP YSPTSP Y+ TS Y +P++NPQS YSPS + YSP++ SP S
Sbjct: 1598 YSPSSPNYSPTSPLYTATSLRYASATPNFNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSP 1657
Query: 431 --------------PYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP 294
YSP+S NYS SPSYSP SPSYSPSSP+YSP+SP S SP YSP
Sbjct: 1658 SFAGSGSNMYSPGNAYSPSSSNYSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSP 1717
Query: 293 -SAGYSPTLPGYSPSSTG-QYTPH 228
S Y+P P YSP+S +PH
Sbjct: 1718 TSPNYTPATPSYSPTSPNYSASPH 1741
Score = 131 bits (330), Expect = 3e-29
Identities = 71/134 (52%), Positives = 87/134 (64%), Gaps = 14/134 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTS-----PSY-NPQSAKYSPSIAYSPSNARLSPASP 429
++P S GYSP+S YSPTSP Y PTS PS+ S YSP AYSPS++ S SP
Sbjct: 1626 FNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSSNSP 1685
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPT 273
YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P++P S SP+YS S YSP
Sbjct: 1686 SYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPA 1745
Query: 272 LPGYSPSSTGQYTP 231
P YS + +Y+P
Sbjct: 1746 SPAYSQTGV-KYSP 1758
Score = 130 bits (328), Expect = 6e-29
Identities = 73/126 (57%), Positives = 84/126 (66%), Gaps = 12/126 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP 420
YSPTSP YSP SPSY SP SP Y P SP Y+P S KYSP S YSPS+ + SP++ YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 419 TSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA--GYSPTLP 267
T YS TSP YSP+S YSP+SPTY+P++ S SP YSP+A YSPT P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Query: 266 GYSPSS 249
YSPSS
Sbjct: 1876 AYSPSS 1881
Score = 117 bits (294), Expect = 5e-25
Identities = 60/97 (61%), Positives = 73/97 (75%), Gaps = 9/97 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS------YGPTSPSYNPQSAKYSPSIA-YSPSNARLSPAS 432
YSPTSP YSPTSP YSP+SP Y PT +Y+ S +YSP+++ YSPS+ + SP S
Sbjct: 1786 YSPTSPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 431 P-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 327
P Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 116 bits (290), Expect = 2e-24
Identities = 59/115 (51%), Positives = 74/115 (64%), Gaps = 16/115 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------- 429
SP SP Y+P SP YSPTSP Y PTSP Y+P S ++SPS YSP+ + S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSPS 291
YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP + S
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 92.4 bits (228), Expect = 2e-17
Identities = 77/190 (40%), Positives = 86/190 (45%), Gaps = 70/190 (36%)
Frame = -3
Query: 590 YSPTSPGYSPTSP--SYSP---TSPSYGPTSPSYNPQSAKYSPSIAYSPSNA--RLSPAS 432
+SP PG SP+SP S SP TSPS SPSY+P S Y+ S SP A SP+S
Sbjct: 1549 WSPAHPGSSPSSPGPSMSPHFSTSPS---VSPSYSPTSPNYTAS---SPGGASPNYSPSS 1602
Query: 431 P-YSPTSP----------------------------NYSPTSPSYSPT------------ 375
P YSPTSP YSPTSP YSPT
Sbjct: 1603 PNYSPTSPLYTATSLRYASATPNFNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGS 1662
Query: 374 ---------------------SPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 261
SPSYSP SP+YSPSSP S SP YSP S YSPT P Y
Sbjct: 1663 GSNMYSPGNAYSPSSSNYSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNY 1722
Query: 260 SPSSTGQYTP 231
+P +T Y+P
Sbjct: 1723 TP-ATPSYSP 1731
Score = 78.2 bits (191), Expect = 5e-13
Identities = 59/145 (40%), Positives = 81/145 (55%), Gaps = 27/145 (18%)
Frame = -3
Query: 584 PTSPGYSPTSPSY-SPTSPSYG--PTSPSYNPQSAKYSPSIA--YSPSNARLSPASPYSP 420
P +P + +P Y SP+ G P PS++P +A + ++ +SP++ SP+SP
Sbjct: 1505 PMTPWVNCHTPRYFSPSGHVSGMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPS 1564
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLP-------- 267
SP++S TSPS SPSYSP+SP Y+ SSP GASP+YSPS+ YSPT P
Sbjct: 1565 MSPHFS-TSPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYTATSLR 1618
Query: 266 -------------GYSPSSTGQYTP 231
GYSPSS+G Y+P
Sbjct: 1619 YASATPNFNPQSTGYSPSSSG-YSP 1642
Score = 57.4 bits (137), Expect = 8e-07
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = -3
Query: 560 TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-Y 384
++PS +P P +P N + +Y +SPS S +P P++SP++ S
Sbjct: 1498 STPSMTP------PMTPWVNCHTPRY-----FSPSGH----VSGMTPGGPSFSPSAASDA 1542
Query: 383 SPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
S SPS+SP+ P SPSSP S SP SPS YSPT P Y+ SS G +P+
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPHFSTSPSVSPS--YSPTSPNYTASSPGGASPN 1597
Score = 54.3 bits (129), Expect = 7e-06
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPS 474
Y+PT+ YSPTSP YSPT+PS Y PTSP+Y+P S + S
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[141][TOP]
>UniRef100_Q9HGZ5 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=Q9HGZ5_ASPOR
Length = 1748
Score = 139 bits (349), Expect = 2e-31
Identities = 73/129 (56%), Positives = 91/129 (70%), Gaps = 9/129 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAY---SPSNARLSPASP-Y 426
YSPTSPG + TSP +S TSP + P SPS+ P S YSP S AY SP++ SP SP +
Sbjct: 1586 YSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGF 1645
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP----SAGYSPTLPGYS 258
SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP GA+ SP S Y+PT PG+S
Sbjct: 1646 SPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAARHLSPTSPTSPKYTPTSPGWS 1705
Query: 257 PSSTGQYTP 231
P+S Y+P
Sbjct: 1706 PTSPQTYSP 1714
Score = 127 bits (320), Expect = 5e-28
Identities = 68/122 (55%), Positives = 84/122 (68%), Gaps = 6/122 (4%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA----SPYS 423
SPTSP YSPTSP +SPTSP+Y PTSPS++P S +SP S +YSP++ + A SP S
Sbjct: 1632 SPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAARHLSPTS 1691
Query: 422 PTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSST 246
PTSP Y+PTSP +SPTSP +YSP+SP ++ S SP S GYSPT P +SPSS
Sbjct: 1692 PTSPKYTPTSPGWSPTSPQTYSPTSPNFA-----GSPTSPGGPTSPGYSPTSPAFSPSSP 1746
Query: 245 GQ 240
Q
Sbjct: 1747 RQ 1748
Score = 108 bits (270), Expect = 3e-22
Identities = 69/138 (50%), Positives = 86/138 (62%), Gaps = 24/138 (17%)
Frame = -3
Query: 590 YSPTSP---GYSPTSPSYSPTSPS-YGPTSP-SYNPQSAKYSPSIAYSPSNARL------ 444
Y PT G+SP + TSP+ Y P+SP S NP S YSPS +YSP++ +
Sbjct: 1545 YQPTGGFGGGFSPAA-----TSPAGYSPSSPFSANPTSPGYSPSSSYSPTSPGMAMTSPR 1599
Query: 443 --------SPASP-YSPTSPNYSPTSPSY---SPTSPSYSPSSPTYSPSSPYSSGASPDY 300
SPASP ++PTSP YSPTSP+Y SPTSPSYSP+SP +SP+SP S SP +
Sbjct: 1600 FSMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSF 1659
Query: 299 SP-SAGYSPTLPGYSPSS 249
SP S +SPT P YSP+S
Sbjct: 1660 SPASPAFSPTSPSYSPTS 1677
Score = 92.8 bits (229), Expect = 2e-17
Identities = 51/109 (46%), Positives = 63/109 (57%), Gaps = 35/109 (32%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP------------------SIAY 465
YSPTSPG+SPTSP+YSPTSPS+ P SP+++P S YSP S Y
Sbjct: 1638 YSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAARHLSPTSPTSPKY 1697
Query: 464 SPSNARLSPASP--YSPTSPN---------------YSPTSPSYSPTSP 369
+P++ SP SP YSPTSPN YSPTSP++SP+SP
Sbjct: 1698 TPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSPSSP 1746
[142][TOP]
>UniRef100_B4JXA6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4JXA6_DROGR
Length = 1889
Score = 138 bits (347), Expect = 4e-31
Identities = 73/124 (58%), Positives = 86/124 (69%), Gaps = 4/124 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTS 414
YSP+SP YSPTSP YSPTSPSY PTSP Y + YSP+ ++ SPASP YS T
Sbjct: 1694 YSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYSASPHYSPASPAYSQTG 1753
Query: 413 PNYSPTSPSYSPTSPSY--SPSSPTYSPSSPYSSGASPDYSPSAG-YSPTLPGYSPSSTG 243
YSPTSP+YSP SPSY SP SP Y+P SP S ASP YSP++ YSP+ P +SPS+
Sbjct: 1754 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN-- 1811
Query: 242 QYTP 231
QY+P
Sbjct: 1812 QYSP 1815
Score = 133 bits (335), Expect = 9e-30
Identities = 74/144 (51%), Positives = 86/144 (59%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS--------------IAYSPSN 453
YSPTSP YSPTSPSYSPTSP Y +PSY+P S YS S + YSP++
Sbjct: 1701 YSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTS 1760
Query: 452 ARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS S
Sbjct: 1761 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTY 1820
Query: 302 YSPSAGYSPTLPGYSPSSTGQYTP 231
+ S YSP + YSPSST +Y+P
Sbjct: 1821 SATSPRYSPNMSIYSPSST-KYSP 1843
Score = 132 bits (333), Expect = 2e-29
Identities = 69/118 (58%), Positives = 78/118 (66%), Gaps = 4/118 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSP SP YSP SPSYSP+SPSY PTSP Y+P S YSP S Y+ SP SP S
Sbjct: 1680 YSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYSAS 1739
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSP-SAGYSPTLPGYSPSS 249
P+YSP SP+YS T YSP+SPTYSP SP G+ SP Y+P S YSP P YSP+S
Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTS 1797
Score = 130 bits (328), Expect = 6e-29
Identities = 73/126 (57%), Positives = 84/126 (66%), Gaps = 12/126 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP 420
YSPTSP YSP SPSY SP SP Y P SP Y+P S KYSP S YSPS+ + SP++ YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 419 TSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA--GYSPTLP 267
T YS TSP YSP+S YSP+SPTY+P++ S SP YSP+A YSPT P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Query: 266 GYSPSS 249
YSPSS
Sbjct: 1876 AYSPSS 1881
Score = 129 bits (325), Expect = 1e-28
Identities = 69/149 (46%), Positives = 86/149 (57%), Gaps = 35/149 (23%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-------------------- 471
YSP+SP YSPTSP Y+ TSP Y +P++N QS YSPS
Sbjct: 1598 YSPSSPNYSPTSPLYTATSPRYASATPNFNAQSTGYSPSSSGYSPTSPVYSPTSNFQSSP 1657
Query: 470 --------------AYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP 336
AYSPS++ SP SP YSP SP+YSP+SPSYSPTSP YSP+SP+YSP
Sbjct: 1658 SFAGSGSNLYSPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSP 1717
Query: 335 SSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
+SP + +P YSP++ P YSP+S
Sbjct: 1718 TSPKYTAVTPSYSPTSPNYSASPHYSPAS 1746
Score = 115 bits (289), Expect = 2e-24
Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 9/97 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS------YGPTSPSYNPQSAKYSPSIA-YSPSNARLSPAS 432
YSP SP YSPTSP YSP+SP Y PT +Y+ S +YSP+++ YSPS+ + SP S
Sbjct: 1786 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 431 P-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 327
P Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 114 bits (285), Expect = 6e-24
Identities = 58/115 (50%), Positives = 73/115 (63%), Gaps = 16/115 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------- 429
SP SP Y+P SP YSP SP Y PTSP Y+P S ++SPS YSP+ + S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSPS 291
YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP + S
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 106 bits (265), Expect = 1e-21
Identities = 59/120 (49%), Positives = 77/120 (64%), Gaps = 1/120 (0%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
S SP +SP P SP+SP GP+ Y P S SPS YSP++ + +SP SPN
Sbjct: 1543 SGMSPSWSPAHPGSSPSSP--GPSMSPYFPASPSVSPS--YSPTSPNYTASSP-GGASPN 1597
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSP+SP+YSPTSP Y+ +SP Y+ ++P + S YSP S+GYSPT P YSP+S Q +P
Sbjct: 1598 YSPSSPNYSPTSPLYTATSPRYASATPNFNAQSTGYSPSSSGYSPTSPVYSPTSNFQSSP 1657
Score = 95.1 bits (235), Expect = 4e-18
Identities = 74/173 (42%), Positives = 84/173 (48%), Gaps = 53/173 (30%)
Frame = -3
Query: 590 YSPTSPGYSPTSP--SYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNA--RLSPASP-Y 426
+SP PG SP+SP S SP P+ SPSY+P S Y+ S SP A SP+SP Y
Sbjct: 1549 WSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTAS---SPGGASPNYSPSSPNY 1605
Query: 425 SPTSP----------------------------NYSPTSPSYSPT-----SPS------- 366
SPTSP YSPTSP YSPT SPS
Sbjct: 1606 SPTSPLYTATSPRYASATPNFNAQSTGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSN 1665
Query: 365 -------YSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 231
YSPSS YSP+SP S SP YSPS+ YSPT P YSP+S Y+P
Sbjct: 1666 LYSPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSP-SYSP 1717
Score = 75.9 bits (185), Expect = 2e-12
Identities = 58/145 (40%), Positives = 78/145 (53%), Gaps = 27/145 (18%)
Frame = -3
Query: 584 PTSPGYSPTSPSY-SPTS--PSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPYSP 420
P +P + +P Y SP + P PS++P +A + ++ +SP++ SP+SP
Sbjct: 1505 PMTPWVNCHTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPS 1564
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLP-------- 267
SP Y P SPS SPSYSP+SP Y+ SSP GASP+YSPS+ YSPT P
Sbjct: 1565 MSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYTATSPR 1618
Query: 266 -------------GYSPSSTGQYTP 231
GYSPSS+G Y+P
Sbjct: 1619 YASATPNFNAQSTGYSPSSSG-YSP 1642
Score = 56.6 bits (135), Expect = 1e-06
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = -3
Query: 560 TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-Y 384
++PS +P P +P N + +Y +SP S +P P++SP++ S
Sbjct: 1498 STPSMTP------PMTPWVNCHTPRY-----FSPPGH----VSAMTPGGPSFSPSAASDA 1542
Query: 383 SPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
S SPS+SP+ P SPSSP S ASP SPS YSPT P Y+ SS G +P+
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPTSPNYTASSPGGASPN 1597
Score = 54.3 bits (129), Expect = 7e-06
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPS 474
Y+PT+ YSPTSP YSPT+PS Y PTSP+Y+P S + S
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[143][TOP]
>UniRef100_B4PY98 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PY98_DROYA
Length = 1889
Score = 137 bits (346), Expect = 5e-31
Identities = 74/149 (49%), Positives = 89/149 (59%), Gaps = 29/149 (19%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA------------------- 468
YSP+SP YSPTSP Y+ SP Y T+P++NPQS YSPS +
Sbjct: 1598 YSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTPNFQSSP 1657
Query: 467 ---------YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 315
YSP NA +S YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S
Sbjct: 1658 SFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSP 1717
Query: 314 ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP+Y+P + YSPT P YS S Y+P
Sbjct: 1718 TSPNYTPVTPSYSPTSPNYSASP--HYSP 1744
Score = 137 bits (346), Expect = 5e-31
Identities = 71/118 (60%), Positives = 80/118 (67%), Gaps = 4/118 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSP SP YSPTSPSYSP+SPSY PTSP Y+P S YSP S Y+P SP SP S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSP-SAGYSPTLPGYSPSS 249
P+YSP SP+YS T YSP+SPTYSP SP G+ SP Y+P S YSP P YSP+S
Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTS 1797
Score = 137 bits (344), Expect = 8e-31
Identities = 75/144 (52%), Positives = 88/144 (61%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS--------------IAYSPSN 453
YSPTSP YSPTSPSYSPTSP+Y P +PSY+P S YS S + YSP++
Sbjct: 1701 YSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTS 1760
Query: 452 ARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS S
Sbjct: 1761 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTY 1820
Query: 302 YSPSAGYSPTLPGYSPSSTGQYTP 231
+ S YSP + YSPSST +Y+P
Sbjct: 1821 SATSPRYSPNMSIYSPSST-KYSP 1843
Score = 130 bits (328), Expect = 6e-29
Identities = 73/126 (57%), Positives = 84/126 (66%), Gaps = 12/126 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP 420
YSPTSP YSP SPSY SP SP Y P SP Y+P S KYSP S YSPS+ + SP++ YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 419 TSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA--GYSPTLP 267
T YS TSP YSP+S YSP+SPTY+P++ S SP YSP+A YSPT P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Query: 266 GYSPSS 249
YSPSS
Sbjct: 1876 AYSPSS 1881
Score = 115 bits (289), Expect = 2e-24
Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 9/97 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS------YGPTSPSYNPQSAKYSPSIA-YSPSNARLSPAS 432
YSP SP YSPTSP YSP+SP Y PT +Y+ S +YSP+++ YSPS+ + SP S
Sbjct: 1786 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 431 P-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 327
P Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 114 bits (285), Expect = 6e-24
Identities = 58/115 (50%), Positives = 73/115 (63%), Gaps = 16/115 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------- 429
SP SP Y+P SP YSP SP Y PTSP Y+P S ++SPS YSP+ + S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSPS 291
YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP + S
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 110 bits (274), Expect = 1e-22
Identities = 76/199 (38%), Positives = 88/199 (44%), Gaps = 79/199 (39%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPT----------------SPSYGPT------------SPSYNPQS 492
S SP +SP P SP+ SPSY PT SP+Y+P S
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 491 AKYSP----------------------SIAYSPSNARLSPASP----------------- 429
YSP S YSPS++ SP SP
Sbjct: 1603 PNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTPNFQSSPSFAGS 1662
Query: 428 ----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGY 282
YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP S Y
Sbjct: 1663 GSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNY 1722
Query: 281 SPTLPGYSPSSTG-QYTPH 228
+P P YSP+S +PH
Sbjct: 1723 TPVTPSYSPTSPNYSASPH 1741
Score = 76.6 bits (187), Expect = 1e-12
Identities = 58/145 (40%), Positives = 78/145 (53%), Gaps = 27/145 (18%)
Frame = -3
Query: 584 PTSPGYSPTSPSY-SPTS--PSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPYSP 420
P +P + +P Y SP + P PS++P +A + ++ +SP++ SP+SP
Sbjct: 1505 PMTPWVNCNTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPS 1564
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLP-------- 267
SP Y P SPS SPSYSP+SP Y+ SSP GASP+YSPS+ YSPT P
Sbjct: 1565 MSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYASASPR 1618
Query: 266 -------------GYSPSSTGQYTP 231
GYSPSS+G Y+P
Sbjct: 1619 YASTTPNFNPQSTGYSPSSSG-YSP 1642
Score = 56.6 bits (135), Expect = 1e-06
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = -3
Query: 560 TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-Y 384
++PS +P P +P N + +Y +SP S +P P++SP++ S
Sbjct: 1498 STPSMTP------PMTPWVNCNTPRY-----FSPPGH----VSAMTPGGPSFSPSAASDA 1542
Query: 383 SPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
S SPS+SP+ P SPSSP S ASP SPS YSPT P Y+ SS G +P+
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPTSPNYTASSPGGASPN 1597
Score = 54.3 bits (129), Expect = 7e-06
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPS 474
Y+PT+ YSPTSP YSPT+PS Y PTSP+Y+P S + S
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[144][TOP]
>UniRef100_B3NUC1 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NUC1_DROER
Length = 1889
Score = 137 bits (346), Expect = 5e-31
Identities = 71/118 (60%), Positives = 80/118 (67%), Gaps = 4/118 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSP SP YSPTSPSYSP+SPSY PTSP Y+P S YSP S Y+P SP SP S
Sbjct: 1680 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSP-SAGYSPTLPGYSPSS 249
P+YSP SP+YS T YSP+SPTYSP SP G+ SP Y+P S YSP P YSP+S
Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTS 1797
Score = 137 bits (344), Expect = 8e-31
Identities = 73/149 (48%), Positives = 90/149 (60%), Gaps = 29/149 (19%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA------------------- 468
YSP+SP YSPTSP Y+ SP Y T+P++NPQS YSPS +
Sbjct: 1598 YSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTPHFQSSP 1657
Query: 467 ---------YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 315
YSP+NA ++ YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S
Sbjct: 1658 SFAGSGSNIYSPANAYSPSSANYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSP 1717
Query: 314 ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP+Y+P + YSPT P YS S Y+P
Sbjct: 1718 TSPNYTPVTPSYSPTSPNYSASP--HYSP 1744
Score = 137 bits (344), Expect = 8e-31
Identities = 75/144 (52%), Positives = 88/144 (61%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS--------------IAYSPSN 453
YSPTSP YSPTSPSYSPTSP+Y P +PSY+P S YS S + YSP++
Sbjct: 1701 YSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTS 1760
Query: 452 ARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS S
Sbjct: 1761 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTY 1820
Query: 302 YSPSAGYSPTLPGYSPSSTGQYTP 231
+ S YSP + YSPSST +Y+P
Sbjct: 1821 SATSPRYSPNMSIYSPSST-KYSP 1843
Score = 130 bits (328), Expect = 6e-29
Identities = 73/126 (57%), Positives = 84/126 (66%), Gaps = 12/126 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP 420
YSPTSP YSP SPSY SP SP Y P SP Y+P S KYSP S YSPS+ + SP++ YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 419 TSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA--GYSPTLP 267
T YS TSP YSP+S YSP+SPTY+P++ S SP YSP+A YSPT P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Query: 266 GYSPSS 249
YSPSS
Sbjct: 1876 AYSPSS 1881
Score = 115 bits (289), Expect = 2e-24
Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 9/97 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS------YGPTSPSYNPQSAKYSPSIA-YSPSNARLSPAS 432
YSP SP YSPTSP YSP+SP Y PT +Y+ S +YSP+++ YSPS+ + SP S
Sbjct: 1786 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 431 P-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 327
P Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 114 bits (285), Expect = 6e-24
Identities = 58/115 (50%), Positives = 73/115 (63%), Gaps = 16/115 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------- 429
SP SP Y+P SP YSP SP Y PTSP Y+P S ++SPS YSP+ + S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSPS 291
YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP + S
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 110 bits (274), Expect = 1e-22
Identities = 76/199 (38%), Positives = 88/199 (44%), Gaps = 79/199 (39%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPT----------------SPSYGPT------------SPSYNPQS 492
S SP +SP P SP+ SPSY PT SP+Y+P S
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 491 AKYSP----------------------SIAYSPSNARLSPASP----------------- 429
YSP S YSPS++ SP SP
Sbjct: 1603 PNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTPHFQSSPSFAGS 1662
Query: 428 ----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGY 282
YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP S Y
Sbjct: 1663 GSNIYSPANAYSPSSANYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNY 1722
Query: 281 SPTLPGYSPSSTG-QYTPH 228
+P P YSP+S +PH
Sbjct: 1723 TPVTPSYSPTSPNYSASPH 1741
Score = 76.3 bits (186), Expect = 2e-12
Identities = 58/145 (40%), Positives = 78/145 (53%), Gaps = 27/145 (18%)
Frame = -3
Query: 584 PTSPGYSPTSPSY-SPTS--PSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPYSP 420
P +P + +P Y SP + P PS++P +A + ++ +SP++ SP+SP
Sbjct: 1505 PMTPWANCNTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPS 1564
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLP-------- 267
SP Y P SPS SPSYSP+SP Y+ SSP GASP+YSPS+ YSPT P
Sbjct: 1565 MSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYASASPR 1618
Query: 266 -------------GYSPSSTGQYTP 231
GYSPSS+G Y+P
Sbjct: 1619 YASTTPNFNPQSTGYSPSSSG-YSP 1642
Score = 56.2 bits (134), Expect = 2e-06
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = -3
Query: 560 TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-Y 384
++PS +P P +P N + +Y +SP S +P P++SP++ S
Sbjct: 1498 STPSMTP------PMTPWANCNTPRY-----FSPPGH----VSAMTPGGPSFSPSAASDA 1542
Query: 383 SPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
S SPS+SP+ P SPSSP S ASP SPS YSPT P Y+ SS G +P+
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPTSPNYTASSPGGASPN 1597
Score = 54.3 bits (129), Expect = 7e-06
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPS 474
Y+PT+ YSPTSP YSPT+PS Y PTSP+Y+P S + S
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[145][TOP]
>UniRef100_B4R347 RNA polymerase II 215kD subunit n=1 Tax=Drosophila simulans
RepID=B4R347_DROSI
Length = 552
Score = 137 bits (345), Expect = 6e-31
Identities = 71/118 (60%), Positives = 79/118 (66%), Gaps = 4/118 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSP SP YSPTSPSYSP+SPSY PTSP Y+P S YSP S Y+P SP SP S
Sbjct: 343 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 402
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSP-SAGYSPTLPGYSPSS 249
P YSP SP+YS T YSP+SPTYSP SP G+ SP Y+P S YSP P YSP+S
Sbjct: 403 PQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTS 460
Score = 137 bits (344), Expect = 8e-31
Identities = 78/147 (53%), Positives = 94/147 (63%), Gaps = 27/147 (18%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSP-----ASP 429
YSP+SP YSPTSP Y+ SP Y T+P++NPQS YSPS + YSP++ SP +SP
Sbjct: 263 YSPSSPNYSPTSPLYA--SPRYASTTPNFNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSP 320
Query: 428 ---------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP 294
YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP
Sbjct: 321 SFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSP 380
Query: 293 -SAGYSPTLPGYSP-----SSTGQYTP 231
S Y+P P YSP S++ QY+P
Sbjct: 381 TSPNYTPVTPSYSPTSPNYSASPQYSP 407
Score = 137 bits (344), Expect = 8e-31
Identities = 75/144 (52%), Positives = 88/144 (61%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS--------------IAYSPSN 453
YSPTSP YSPTSPSYSPTSP+Y P +PSY+P S YS S + YSP++
Sbjct: 364 YSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTS 423
Query: 452 ARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS S
Sbjct: 424 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTY 483
Query: 302 YSPSAGYSPTLPGYSPSSTGQYTP 231
+ S YSP + YSPSST +Y+P
Sbjct: 484 SATSPRYSPNMSIYSPSST-KYSP 506
Score = 128 bits (322), Expect = 3e-28
Identities = 72/126 (57%), Positives = 83/126 (65%), Gaps = 12/126 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP 420
YSPTSP YSP SPSY SP SP Y P SP Y+P S KYSP S YSPS+ + SP++ YSP
Sbjct: 419 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 478
Query: 419 TSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA--GYSPTLP 267
T YS TSP YSP+S YSP+SPTY+P++ S SP YSP+A YSP P
Sbjct: 479 TGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKSP 538
Query: 266 GYSPSS 249
YSPSS
Sbjct: 539 AYSPSS 544
Score = 115 bits (288), Expect = 3e-24
Identities = 59/97 (60%), Positives = 71/97 (73%), Gaps = 9/97 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS------YGPTSPSYNPQSAKYSPSIA-YSPSNARLSPAS 432
YSP SP YSPTSP YSP+SP Y PT +Y+ S +YSP+++ YSPS+ + SP S
Sbjct: 449 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 508
Query: 431 P-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 327
P Y+PT+ NYSPTSP YSPT+PS YSP SP YSPSSP
Sbjct: 509 PTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSSP 545
Score = 114 bits (284), Expect = 8e-24
Identities = 58/115 (50%), Positives = 72/115 (62%), Gaps = 16/115 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------- 429
SP SP Y+P SP YSP SP Y PTSP Y+P S ++SPS YSP+ + S SP
Sbjct: 436 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 495
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSPS 291
YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP SP S +SP + S
Sbjct: 496 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSSPTFEES 550
Score = 103 bits (256), Expect = 1e-20
Identities = 63/150 (42%), Positives = 78/150 (52%), Gaps = 34/150 (22%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSP 399
SP YSPTSP+Y+ +SP G SP+Y+P S YSP+ S S ++P S YSP
Sbjct: 241 SPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSP 298
Query: 398 TSPSYSPTSP---------------------------------SYSPSSPTYSPSSPYSS 318
+S YSPTSP +YSP+SP+YSP+SP S
Sbjct: 299 SSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYS 358
Query: 317 GASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
+SP YSP S YSPT P YSP+S YTP
Sbjct: 359 PSSPSYSPTSPCYSPTSPSYSPTSP-NYTP 387
Score = 101 bits (251), Expect = 5e-20
Identities = 69/154 (44%), Positives = 84/154 (54%), Gaps = 34/154 (22%)
Frame = -3
Query: 590 YSPTSPGYSPTSP--SYSPTSPSYGPTSPSYNPQSAKYSPSIA------YSPSNARLSPA 435
+SP PG SP+SP S SP P+ SPSY+P S Y+ S YSPS+ SP
Sbjct: 214 WSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPT 273
Query: 434 SP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-----SSP---------YSSG 315
SP Y+ T+PN++P S YSP+S YSP+SP YSP SSP YS G
Sbjct: 274 SPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPG 333
Query: 314 -----ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
+S +YSP S YSPT P YSPSS Y+P
Sbjct: 334 NAYSPSSSNYSPNSPSYSPTSPSYSPSSP-SYSP 366
Score = 77.4 bits (189), Expect = 8e-13
Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 25/143 (17%)
Frame = -3
Query: 584 PTSPGYSPTSPSY-SPTS--PSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPYSP 420
P +P + +P Y SP + P PS++P +A + ++ +SP++ SP+SP
Sbjct: 170 PMTPWVNCNTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPS 229
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLP-------- 267
SP Y P SPS SPSYSP+SP Y+ SSP GASP+YSPS+ YSPT P
Sbjct: 230 MSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYASPRYA 283
Query: 266 -----------GYSPSSTGQYTP 231
GYSPSS+G Y+P
Sbjct: 284 STTPNFNPQSTGYSPSSSG-YSP 305
Score = 56.6 bits (135), Expect = 1e-06
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = -3
Query: 560 TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-Y 384
++PS +P P +P N + +Y +SP S +P P++SP++ S
Sbjct: 163 STPSMTP------PMTPWVNCNTPRY-----FSPPGH----VSAMTPGGPSFSPSAASDA 207
Query: 383 SPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
S SPS+SP+ P SPSSP S ASP SPS YSPT P Y+ SS G +P+
Sbjct: 208 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPTSPNYTASSPGGASPN 262
[146][TOP]
>UniRef100_B4L732 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4L732_DROMO
Length = 1889
Score = 137 bits (345), Expect = 6e-31
Identities = 74/149 (49%), Positives = 89/149 (59%), Gaps = 29/149 (19%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA------------------- 468
YSP+SP YSPTSP Y+ TSP Y T+P++NPQS YSPS +
Sbjct: 1598 YSPSSPNYSPTSPLYASTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSP 1657
Query: 467 ---------YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 315
YSP NA +S YSP SP+YSP SPSYSP+SPSYSP+SP YSP+SP S
Sbjct: 1658 SFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSP 1717
Query: 314 ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP+Y+P + YSPT P YS S Y+P
Sbjct: 1718 TSPNYTPVTPSYSPTSPNYSASP--HYSP 1744
Score = 137 bits (344), Expect = 8e-31
Identities = 75/144 (52%), Positives = 88/144 (61%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS--------------IAYSPSN 453
YSPTSP YSPTSPSYSPTSP+Y P +PSY+P S YS S + YSP++
Sbjct: 1701 YSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTS 1760
Query: 452 ARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS S
Sbjct: 1761 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTY 1820
Query: 302 YSPSAGYSPTLPGYSPSSTGQYTP 231
+ S YSP + YSPSST +Y+P
Sbjct: 1821 SATSPRYSPNMSIYSPSST-KYSP 1843
Score = 135 bits (340), Expect = 2e-30
Identities = 70/118 (59%), Positives = 79/118 (66%), Gaps = 4/118 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSP SP YSP SPSYSP+SPSY PTSP Y+P S YSP S Y+P SP SP S
Sbjct: 1680 YSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1739
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSP-SAGYSPTLPGYSPSS 249
P+YSP SP+YS T YSP+SPTYSP SP G+ SP Y+P S YSP P YSP+S
Sbjct: 1740 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTS 1797
Score = 130 bits (328), Expect = 6e-29
Identities = 73/126 (57%), Positives = 84/126 (66%), Gaps = 12/126 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP 420
YSPTSP YSP SPSY SP SP Y P SP Y+P S KYSP S YSPS+ + SP++ YSP
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 419 TSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA--GYSPTLP 267
T YS TSP YSP+S YSP+SPTY+P++ S SP YSP+A YSPT P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Query: 266 GYSPSS 249
YSPSS
Sbjct: 1876 AYSPSS 1881
Score = 115 bits (289), Expect = 2e-24
Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 9/97 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS------YGPTSPSYNPQSAKYSPSIA-YSPSNARLSPAS 432
YSP SP YSPTSP YSP+SP Y PT +Y+ S +YSP+++ YSPS+ + SP S
Sbjct: 1786 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1845
Query: 431 P-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 327
P Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1846 PTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 114 bits (285), Expect = 6e-24
Identities = 58/115 (50%), Positives = 73/115 (63%), Gaps = 16/115 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------- 429
SP SP Y+P SP YSP SP Y PTSP Y+P S ++SPS YSP+ + S SP
Sbjct: 1773 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1832
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSPS 291
YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP + S
Sbjct: 1833 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
Score = 107 bits (268), Expect = 5e-22
Identities = 75/199 (37%), Positives = 87/199 (43%), Gaps = 79/199 (39%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPT----------------SPSYGPT------------SPSYNPQS 492
S SP +SP P SP+ SPSY PT SP+Y+P S
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 491 AKYSP----------------------SIAYSPSNARLSPASP----------------- 429
YSP S YSPS++ SP SP
Sbjct: 1603 PNYSPTSPLYASTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGS 1662
Query: 428 ----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGY 282
YSP+S NYSP SPSYSP SPSYSPSSP+YSP+SP S SP YSP S Y
Sbjct: 1663 GSNMYSPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNY 1722
Query: 281 SPTLPGYSPSSTG-QYTPH 228
+P P YSP+S +PH
Sbjct: 1723 TPVTPSYSPTSPNYSASPH 1741
Score = 98.2 bits (243), Expect = 4e-19
Identities = 57/125 (45%), Positives = 77/125 (61%), Gaps = 5/125 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSP--SYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNA--RLSPASP-Y 426
+SP PG SP+SP S SP P+ SPSY+P S Y+ S SP A SP+SP Y
Sbjct: 1549 WSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTAS---SPGGASPNYSPSSPNY 1605
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSST 246
SPTSP Y+ TSP Y+ T+P+++P S YSPSS S SP YSP++ + + P ++ S +
Sbjct: 1606 SPTSPLYASTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNFQSS-PSFAGSGS 1664
Query: 245 GQYTP 231
Y+P
Sbjct: 1665 NMYSP 1669
Score = 76.6 bits (187), Expect = 1e-12
Identities = 58/145 (40%), Positives = 79/145 (54%), Gaps = 27/145 (18%)
Frame = -3
Query: 584 PTSPGYSPTSPSY-SPTS--PSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPYSP 420
P +P + +P Y SP+ + P PS++P +A + ++ +SP++ SP+SP
Sbjct: 1505 PMTPWVNCHTPRYFSPSGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPS 1564
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLP-------- 267
SP Y P SPS SPSYSP+SP Y+ SSP GASP+YSPS+ YSPT P
Sbjct: 1565 MSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYASTSPR 1618
Query: 266 -------------GYSPSSTGQYTP 231
GYSPSS+G Y+P
Sbjct: 1619 YASTTPNFNPQSTGYSPSSSG-YSP 1642
Score = 58.5 bits (140), Expect = 4e-07
Identities = 45/117 (38%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Frame = -3
Query: 560 TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-Y 384
++PS +P P +P N + +Y +SPS S +P P++SP++ S
Sbjct: 1498 STPSMTP------PMTPWVNCHTPRY-----FSPSGH----VSAMTPGGPSFSPSAASDA 1542
Query: 383 SPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
S SPS+SP+ P SPSSP S ASP SPS YSPT P Y+ SS G +P+
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPTSPNYTASSPGGASPN 1597
Score = 54.3 bits (129), Expect = 7e-06
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPS 474
Y+PT+ YSPTSP YSPT+PS Y PTSP+Y+P S + S
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[147][TOP]
>UniRef100_B4IK28 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
RepID=B4IK28_DROSE
Length = 1887
Score = 137 bits (345), Expect = 6e-31
Identities = 71/118 (60%), Positives = 79/118 (66%), Gaps = 4/118 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSP SP YSPTSPSYSP+SPSY PTSP Y+P S YSP S Y+P SP SP S
Sbjct: 1678 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1737
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSP-SAGYSPTLPGYSPSS 249
P YSP SP+YS T YSP+SPTYSP SP G+ SP Y+P S YSP P YSP+S
Sbjct: 1738 PQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTS 1795
Score = 137 bits (344), Expect = 8e-31
Identities = 78/147 (53%), Positives = 94/147 (63%), Gaps = 27/147 (18%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSP-----ASP 429
YSP+SP YSPTSP Y+ SP Y T+P++NPQS YSPS + YSP++ SP +SP
Sbjct: 1598 YSPSSPNYSPTSPLYA--SPRYASTTPNFNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSP 1655
Query: 428 ---------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP 294
YSP+S NYSP SPSYSPTSPSYSPSSP+YSP+SP S SP YSP
Sbjct: 1656 SFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSP 1715
Query: 293 -SAGYSPTLPGYSP-----SSTGQYTP 231
S Y+P P YSP S++ QY+P
Sbjct: 1716 TSPNYTPVTPSYSPTSPNYSASPQYSP 1742
Score = 137 bits (344), Expect = 8e-31
Identities = 75/144 (52%), Positives = 88/144 (61%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS--------------IAYSPSN 453
YSPTSP YSPTSPSYSPTSP+Y P +PSY+P S YS S + YSP++
Sbjct: 1699 YSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTS 1758
Query: 452 ARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS S
Sbjct: 1759 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTY 1818
Query: 302 YSPSAGYSPTLPGYSPSSTGQYTP 231
+ S YSP + YSPSST +Y+P
Sbjct: 1819 SATSPRYSPNMSIYSPSST-KYSP 1841
Score = 130 bits (328), Expect = 6e-29
Identities = 73/126 (57%), Positives = 84/126 (66%), Gaps = 12/126 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP 420
YSPTSP YSP SPSY SP SP Y P SP Y+P S KYSP S YSPS+ + SP++ YSP
Sbjct: 1754 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1813
Query: 419 TSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA--GYSPTLP 267
T YS TSP YSP+S YSP+SPTY+P++ S SP YSP+A YSPT P
Sbjct: 1814 TGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1873
Query: 266 GYSPSS 249
YSPSS
Sbjct: 1874 AYSPSS 1879
Score = 115 bits (289), Expect = 2e-24
Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 9/97 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS------YGPTSPSYNPQSAKYSPSIA-YSPSNARLSPAS 432
YSP SP YSPTSP YSP+SP Y PT +Y+ S +YSP+++ YSPS+ + SP S
Sbjct: 1784 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1843
Query: 431 P-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 327
P Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1844 PTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1880
Score = 114 bits (285), Expect = 6e-24
Identities = 58/115 (50%), Positives = 73/115 (63%), Gaps = 16/115 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------- 429
SP SP Y+P SP YSP SP Y PTSP Y+P S ++SPS YSP+ + S SP
Sbjct: 1771 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1830
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSPS 291
YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP + S
Sbjct: 1831 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1885
Score = 103 bits (256), Expect = 1e-20
Identities = 63/150 (42%), Positives = 78/150 (52%), Gaps = 34/150 (22%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSP 399
SP YSPTSP+Y+ +SP G SP+Y+P S YSP+ S S ++P S YSP
Sbjct: 1576 SPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSP 1633
Query: 398 TSPSYSPTSP---------------------------------SYSPSSPTYSPSSPYSS 318
+S YSPTSP +YSP+SP+YSP+SP S
Sbjct: 1634 SSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYS 1693
Query: 317 GASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
+SP YSP S YSPT P YSP+S YTP
Sbjct: 1694 PSSPSYSPTSPCYSPTSPSYSPTSP-NYTP 1722
Score = 101 bits (251), Expect = 5e-20
Identities = 69/154 (44%), Positives = 84/154 (54%), Gaps = 34/154 (22%)
Frame = -3
Query: 590 YSPTSPGYSPTSP--SYSPTSPSYGPTSPSYNPQSAKYSPSIA------YSPSNARLSPA 435
+SP PG SP+SP S SP P+ SPSY+P S Y+ S YSPS+ SP
Sbjct: 1549 WSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPT 1608
Query: 434 SP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-----SSP---------YSSG 315
SP Y+ T+PN++P S YSP+S YSP+SP YSP SSP YS G
Sbjct: 1609 SPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPG 1668
Query: 314 -----ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
+S +YSP S YSPT P YSPSS Y+P
Sbjct: 1669 NAYSPSSSNYSPNSPSYSPTSPSYSPSSP-SYSP 1701
Score = 77.4 bits (189), Expect = 8e-13
Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 25/143 (17%)
Frame = -3
Query: 584 PTSPGYSPTSPSY-SPTS--PSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPYSP 420
P +P + +P Y SP + P PS++P +A + ++ +SP++ SP+SP
Sbjct: 1505 PMTPWVNCNTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPS 1564
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLP-------- 267
SP Y P SPS SPSYSP+SP Y+ SSP GASP+YSPS+ YSPT P
Sbjct: 1565 MSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYASPRYA 1618
Query: 266 -----------GYSPSSTGQYTP 231
GYSPSS+G Y+P
Sbjct: 1619 STTPNFNPQSTGYSPSSSG-YSP 1640
Score = 56.6 bits (135), Expect = 1e-06
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = -3
Query: 560 TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-Y 384
++PS +P P +P N + +Y +SP S +P P++SP++ S
Sbjct: 1498 STPSMTP------PMTPWVNCNTPRY-----FSPPGH----VSAMTPGGPSFSPSAASDA 1542
Query: 383 SPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
S SPS+SP+ P SPSSP S ASP SPS YSPT P Y+ SS G +P+
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPTSPNYTASSPGGASPN 1597
Score = 54.3 bits (129), Expect = 7e-06
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPS 474
Y+PT+ YSPTSP YSPT+PS Y PTSP+Y+P S + S
Sbjct: 1846 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1885
[148][TOP]
>UniRef100_A9UNH9 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster
RepID=A9UNH9_DROME
Length = 1887
Score = 137 bits (345), Expect = 6e-31
Identities = 71/118 (60%), Positives = 79/118 (66%), Gaps = 4/118 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSP SP YSPTSPSYSP+SPSY PTSP Y+P S YSP S Y+P SP SP S
Sbjct: 1678 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1737
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSP-SAGYSPTLPGYSPSS 249
P YSP SP+YS T YSP+SPTYSP SP G+ SP Y+P S YSP P YSP+S
Sbjct: 1738 PQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTS 1795
Score = 137 bits (344), Expect = 8e-31
Identities = 75/144 (52%), Positives = 88/144 (61%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS--------------IAYSPSN 453
YSPTSP YSPTSPSYSPTSP+Y P +PSY+P S YS S + YSP++
Sbjct: 1699 YSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTS 1758
Query: 452 ARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS S
Sbjct: 1759 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTY 1818
Query: 302 YSPSAGYSPTLPGYSPSSTGQYTP 231
+ S YSP + YSPSST +Y+P
Sbjct: 1819 SATSPRYSPNMSIYSPSST-KYSP 1841
Score = 135 bits (339), Expect = 3e-30
Identities = 75/149 (50%), Positives = 90/149 (60%), Gaps = 29/149 (19%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA------------------- 468
YSP+SP YSPTSP Y+ SP Y T+P++NPQS YSPS +
Sbjct: 1598 YSPSSPNYSPTSPLYA--SPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSP 1655
Query: 467 ---------YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 315
YSP NA +S YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S
Sbjct: 1656 SFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSP 1715
Query: 314 ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP+Y+P + YSPT P YS S QY+P
Sbjct: 1716 TSPNYTPVTPSYSPTSPNYSASP--QYSP 1742
Score = 133 bits (334), Expect = 1e-29
Identities = 71/134 (52%), Positives = 87/134 (64%), Gaps = 14/134 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPT-----SPSYNPQSAK-YSPSIAYSPSNARLSPASP 429
++P S GYSP+S YSPTSP Y PT SPS+ + YSP AYSPS++ SP SP
Sbjct: 1624 FNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSP 1683
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPT 273
YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P S SP+YS S YSP
Sbjct: 1684 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPA 1743
Query: 272 LPGYSPSSTGQYTP 231
P YS + +Y+P
Sbjct: 1744 SPAYSQTGV-KYSP 1756
Score = 129 bits (323), Expect = 2e-28
Identities = 72/126 (57%), Positives = 83/126 (65%), Gaps = 12/126 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP 420
YSPTSP YSP SPSY SP SP Y P SP Y+P S KYSP S YSPS+ + SP++ YSP
Sbjct: 1754 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1813
Query: 419 TSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA--GYSPTLP 267
T YS TSP YSP+S YSP+SPTY+P++ S P YSP+A YSPT P
Sbjct: 1814 TGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSPTSP 1873
Query: 266 GYSPSS 249
YSPSS
Sbjct: 1874 AYSPSS 1879
Score = 114 bits (284), Expect = 8e-24
Identities = 58/97 (59%), Positives = 71/97 (73%), Gaps = 9/97 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS------YGPTSPSYNPQSAKYSPSIA-YSPSNARLSPAS 432
YSP SP YSPTSP YSP+SP Y PT +Y+ S +YSP+++ YSPS+ + SP S
Sbjct: 1784 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1843
Query: 431 P-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 327
P Y+PT+ NYSPT P YSPT+PS YSP+SP YSPSSP
Sbjct: 1844 PTYTPTARNYSPTPPMYSPTAPSHYSPTSPAYSPSSP 1880
Score = 112 bits (280), Expect = 2e-23
Identities = 57/115 (49%), Positives = 72/115 (62%), Gaps = 16/115 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------- 429
SP SP Y+P SP YSP SP Y PTSP Y+P S ++SPS YSP+ + S SP
Sbjct: 1771 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1830
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSPS 291
YSPTSP Y+PT+ +YSPT P YSP++P+ YSP+SP S +SP + S
Sbjct: 1831 IYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSPTSPAYSPSSPTFEES 1885
Score = 102 bits (253), Expect = 3e-20
Identities = 69/154 (44%), Positives = 84/154 (54%), Gaps = 34/154 (22%)
Frame = -3
Query: 590 YSPTSPGYSPTSP--SYSPTSPSYGPTSPSYNPQSAKYSPSIA------YSPSNARLSPA 435
+SP PG SP+SP S SP P+ SPSY+P S Y+ S YSPS+ SP
Sbjct: 1549 WSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPT 1608
Query: 434 SP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-----SSP---------YSSG 315
SP Y+ T+PN++P S YSP+S YSP+SP YSP SSP YS G
Sbjct: 1609 SPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPG 1668
Query: 314 -----ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
+S +YSP S YSPT P YSPSS Y+P
Sbjct: 1669 NAYSPSSSNYSPNSPSYSPTSPSYSPSSP-SYSP 1701
Score = 77.0 bits (188), Expect = 1e-12
Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 25/143 (17%)
Frame = -3
Query: 584 PTSPGYSPTSPSY-SPTS--PSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPYSP 420
P +P + +P Y SP + P PS++P +A + ++ +SP++ SP+SP
Sbjct: 1505 PMTPWANCNTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPS 1564
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLP-------- 267
SP Y P SPS SPSYSP+SP Y+ SSP GASP+YSPS+ YSPT P
Sbjct: 1565 MSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYASPRYA 1618
Query: 266 -----------GYSPSSTGQYTP 231
GYSPSS+G Y+P
Sbjct: 1619 STTPNFNPQSTGYSPSSSG-YSP 1640
Score = 56.2 bits (134), Expect = 2e-06
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = -3
Query: 560 TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-Y 384
++PS +P P +P N + +Y +SP S +P P++SP++ S
Sbjct: 1498 STPSMTP------PMTPWANCNTPRY-----FSPPGH----VSAMTPGGPSFSPSAASDA 1542
Query: 383 SPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
S SPS+SP+ P SPSSP S ASP SPS YSPT P Y+ SS G +P+
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPTSPNYTASSPGGASPN 1597
[149][TOP]
>UniRef100_P04052 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Drosophila
melanogaster RepID=RPB1_DROME
Length = 1887
Score = 137 bits (345), Expect = 6e-31
Identities = 71/118 (60%), Positives = 79/118 (66%), Gaps = 4/118 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSP SP YSPTSPSYSP+SPSY PTSP Y+P S YSP S Y+P SP SP S
Sbjct: 1678 YSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1737
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSP-SAGYSPTLPGYSPSS 249
P YSP SP+YS T YSP+SPTYSP SP G+ SP Y+P S YSP P YSP+S
Sbjct: 1738 PQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTS 1795
Score = 137 bits (344), Expect = 8e-31
Identities = 75/144 (52%), Positives = 88/144 (61%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS--------------IAYSPSN 453
YSPTSP YSPTSPSYSPTSP+Y P +PSY+P S YS S + YSP++
Sbjct: 1699 YSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTS 1758
Query: 452 ARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS S
Sbjct: 1759 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTY 1818
Query: 302 YSPSAGYSPTLPGYSPSSTGQYTP 231
+ S YSP + YSPSST +Y+P
Sbjct: 1819 SATSPRYSPNMSIYSPSST-KYSP 1841
Score = 135 bits (339), Expect = 3e-30
Identities = 75/149 (50%), Positives = 90/149 (60%), Gaps = 29/149 (19%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA------------------- 468
YSP+SP YSPTSP Y+ SP Y T+P++NPQS YSPS +
Sbjct: 1598 YSPSSPNYSPTSPLYA--SPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSP 1655
Query: 467 ---------YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 315
YSP NA +S YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S
Sbjct: 1656 SFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSP 1715
Query: 314 ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP+Y+P + YSPT P YS S QY+P
Sbjct: 1716 TSPNYTPVTPSYSPTSPNYSASP--QYSP 1742
Score = 133 bits (334), Expect = 1e-29
Identities = 71/134 (52%), Positives = 87/134 (64%), Gaps = 14/134 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPT-----SPSYNPQSAK-YSPSIAYSPSNARLSPASP 429
++P S GYSP+S YSPTSP Y PT SPS+ + YSP AYSPS++ SP SP
Sbjct: 1624 FNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSP 1683
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPT 273
YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P S SP+YS S YSP
Sbjct: 1684 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPA 1743
Query: 272 LPGYSPSSTGQYTP 231
P YS + +Y+P
Sbjct: 1744 SPAYSQTGV-KYSP 1756
Score = 130 bits (328), Expect = 6e-29
Identities = 73/126 (57%), Positives = 84/126 (66%), Gaps = 12/126 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP 420
YSPTSP YSP SPSY SP SP Y P SP Y+P S KYSP S YSPS+ + SP++ YSP
Sbjct: 1754 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1813
Query: 419 TSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA--GYSPTLP 267
T YS TSP YSP+S YSP+SPTY+P++ S SP YSP+A YSPT P
Sbjct: 1814 TGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1873
Query: 266 GYSPSS 249
YSPSS
Sbjct: 1874 AYSPSS 1879
Score = 115 bits (289), Expect = 2e-24
Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 9/97 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS------YGPTSPSYNPQSAKYSPSIA-YSPSNARLSPAS 432
YSP SP YSPTSP YSP+SP Y PT +Y+ S +YSP+++ YSPS+ + SP S
Sbjct: 1784 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1843
Query: 431 P-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 327
P Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1844 PTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1880
Score = 114 bits (285), Expect = 6e-24
Identities = 58/115 (50%), Positives = 73/115 (63%), Gaps = 16/115 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------- 429
SP SP Y+P SP YSP SP Y PTSP Y+P S ++SPS YSP+ + S SP
Sbjct: 1771 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1830
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSPS 291
YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP + S
Sbjct: 1831 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1885
Score = 102 bits (253), Expect = 3e-20
Identities = 69/154 (44%), Positives = 84/154 (54%), Gaps = 34/154 (22%)
Frame = -3
Query: 590 YSPTSPGYSPTSP--SYSPTSPSYGPTSPSYNPQSAKYSPSIA------YSPSNARLSPA 435
+SP PG SP+SP S SP P+ SPSY+P S Y+ S YSPS+ SP
Sbjct: 1549 WSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPT 1608
Query: 434 SP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-----SSP---------YSSG 315
SP Y+ T+PN++P S YSP+S YSP+SP YSP SSP YS G
Sbjct: 1609 SPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPG 1668
Query: 314 -----ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
+S +YSP S YSPT P YSPSS Y+P
Sbjct: 1669 NAYSPSSSNYSPNSPSYSPTSPSYSPSSP-SYSP 1701
Score = 77.0 bits (188), Expect = 1e-12
Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 25/143 (17%)
Frame = -3
Query: 584 PTSPGYSPTSPSY-SPTS--PSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPYSP 420
P +P + +P Y SP + P PS++P +A + ++ +SP++ SP+SP
Sbjct: 1505 PMTPWANCNTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPS 1564
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLP-------- 267
SP Y P SPS SPSYSP+SP Y+ SSP GASP+YSPS+ YSPT P
Sbjct: 1565 MSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYASPRYA 1618
Query: 266 -----------GYSPSSTGQYTP 231
GYSPSS+G Y+P
Sbjct: 1619 STTPNFNPQSTGYSPSSSG-YSP 1640
Score = 56.2 bits (134), Expect = 2e-06
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = -3
Query: 560 TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-Y 384
++PS +P P +P N + +Y +SP S +P P++SP++ S
Sbjct: 1498 STPSMTP------PMTPWANCNTPRY-----FSPPGH----VSAMTPGGPSFSPSAASDA 1542
Query: 383 SPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
S SPS+SP+ P SPSSP S ASP SPS YSPT P Y+ SS G +P+
Sbjct: 1543 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPTSPNYTASSPGGASPN 1597
Score = 54.3 bits (129), Expect = 7e-06
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPS 474
Y+PT+ YSPTSP YSPT+PS Y PTSP+Y+P S + S
Sbjct: 1846 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1885
[150][TOP]
>UniRef100_B4NDK9 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4NDK9_DROWI
Length = 1890
Score = 137 bits (344), Expect = 8e-31
Identities = 75/144 (52%), Positives = 88/144 (61%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS--------------IAYSPSN 453
YSPTSP YSPTSPSYSPTSP+Y P +PSY+P S YS S + YSP++
Sbjct: 1702 YSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTS 1761
Query: 452 ARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS S
Sbjct: 1762 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTY 1821
Query: 302 YSPSAGYSPTLPGYSPSSTGQYTP 231
+ S YSP + YSPSST +Y+P
Sbjct: 1822 SATSPRYSPNMSIYSPSST-KYSP 1844
Score = 136 bits (343), Expect = 1e-30
Identities = 70/118 (59%), Positives = 80/118 (67%), Gaps = 4/118 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
Y+P SP YSPTSPSYSP+SPSY PTSP Y+P S YSP S Y+P SP SP S
Sbjct: 1681 YTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSAS 1740
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSP-SAGYSPTLPGYSPSS 249
P+YSP SP+YS T YSP+SPTYSP SP G+ SP Y+P S YSP P YSP+S
Sbjct: 1741 PHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTS 1798
Score = 134 bits (338), Expect = 4e-30
Identities = 73/149 (48%), Positives = 89/149 (59%), Gaps = 29/149 (19%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA------------------- 468
YSP+SP YSPTSP Y+ TSP Y T+P++N QS YSPS +
Sbjct: 1599 YSPSSPNYSPTSPLYAATSPRYASTTPNFNLQSTGYSPSSSGYSPTSPVYSPTSNFQSSP 1658
Query: 467 ---------YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 315
YSP NA +S Y+P SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S
Sbjct: 1659 SFAGSGSNMYSPGNAYSPSSSNYTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSP 1718
Query: 314 ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP+Y+P + YSPT P YS S Y+P
Sbjct: 1719 TSPNYTPVTPSYSPTSPNYSASP--HYSP 1745
Score = 130 bits (328), Expect = 6e-29
Identities = 73/126 (57%), Positives = 84/126 (66%), Gaps = 12/126 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP 420
YSPTSP YSP SPSY SP SP Y P SP Y+P S KYSP S YSPS+ + SP++ YSP
Sbjct: 1757 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1816
Query: 419 TSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA--GYSPTLP 267
T YS TSP YSP+S YSP+SPTY+P++ S SP YSP+A YSPT P
Sbjct: 1817 TGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1876
Query: 266 GYSPSS 249
YSPSS
Sbjct: 1877 AYSPSS 1882
Score = 130 bits (326), Expect = 1e-28
Identities = 76/164 (46%), Positives = 91/164 (55%), Gaps = 43/164 (26%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS------YSPTSPSYGPTSPSYNPQSAKYS--------PSIAYSPSN 453
YSPTSP Y+ +SPS YSP+SP+Y PTSP Y S +Y+ S YSPS+
Sbjct: 1579 YSPTSPNYTASSPSGGASPNYSPSSPNYSPTSPLYAATSPRYASTTPNFNLQSTGYSPSS 1638
Query: 452 ARLSPASP---------------------------YSPTSPNYSPTSPSYSPTSPSYSPS 354
+ SP SP YSP+S NY+P SPSYSPTSPSYSPS
Sbjct: 1639 SGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYTPNSPSYSPTSPSYSPS 1698
Query: 353 SPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG-QYTPH 228
SP+YSP+SP S SP YSP S Y+P P YSP+S +PH
Sbjct: 1699 SPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPH 1742
Score = 115 bits (289), Expect = 2e-24
Identities = 59/97 (60%), Positives = 72/97 (74%), Gaps = 9/97 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS------YGPTSPSYNPQSAKYSPSIA-YSPSNARLSPAS 432
YSP SP YSPTSP YSP+SP Y PT +Y+ S +YSP+++ YSPS+ + SP S
Sbjct: 1787 YSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTS 1846
Query: 431 P-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 327
P Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1847 PTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1883
Score = 114 bits (285), Expect = 6e-24
Identities = 58/115 (50%), Positives = 73/115 (63%), Gaps = 16/115 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------- 429
SP SP Y+P SP YSP SP Y PTSP Y+P S ++SPS YSP+ + S SP
Sbjct: 1774 SPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMS 1833
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSPS 291
YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP + S
Sbjct: 1834 IYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1888
Score = 108 bits (271), Expect = 2e-22
Identities = 59/120 (49%), Positives = 77/120 (64%), Gaps = 1/120 (0%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
S SP +SP P SP+SP GP+ Y P S SPS YSP++ + +SP SPN
Sbjct: 1543 SGMSPSWSPAHPGSSPSSP--GPSMSPYFPTSPSVSPS--YSPTSPNYTASSPSGGASPN 1598
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
YSP+SP+YSPTSP Y+ +SP Y+ ++P + S YSP S+GYSPT P YSP+S Q +P
Sbjct: 1599 YSPSSPNYSPTSPLYAATSPRYASTTPNFNLQSTGYSPSSSGYSPTSPVYSPTSNFQSSP 1658
Score = 81.6 bits (200), Expect = 4e-14
Identities = 61/145 (42%), Positives = 81/145 (55%), Gaps = 27/145 (18%)
Frame = -3
Query: 584 PTSPGYSPTSPSY-SPT--SPSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPYSP 420
P +P + +P Y SP + S P PS++P +A + ++ +SP++ SP+SP
Sbjct: 1505 PMTPWVNCNTPRYFSPQGHASSMTPGGPSFSPAAASDASGMSPSWSPAHPGSSPSSPGPS 1564
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLP-------- 267
SP Y PTSPS SPSYSP+SP Y+ SSP S GASP+YSPS+ YSPT P
Sbjct: 1565 MSP-YFPTSPS---VSPSYSPTSPNYTASSP-SGGASPNYSPSSPNYSPTSPLYAATSPR 1619
Query: 266 -------------GYSPSSTGQYTP 231
GYSPSS+G Y+P
Sbjct: 1620 YASTTPNFNLQSTGYSPSSSG-YSP 1643
Score = 54.3 bits (129), Expect = 7e-06
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPS 474
Y+PT+ YSPTSP YSPT+PS Y PTSP+Y+P S + S
Sbjct: 1849 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1888
[151][TOP]
>UniRef100_Q84KP6 DNA-directed RNA polymerase n=1 Tax=Cyanidioschyzon merolae
RepID=Q84KP6_CYAME
Length = 1819
Score = 135 bits (339), Expect = 3e-30
Identities = 83/136 (61%), Positives = 97/136 (71%), Gaps = 16/136 (11%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPS--NARLSPASP--- 429
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSP S AYSPS N SP+SP
Sbjct: 1651 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPSSPNVAYSPSSPNVA 1710
Query: 428 YSPTSPN--YSPTSP--SYSPTSP--SYSPSSP--TYSPSSPYSSGASPDYSPSAGYSPT 273
YSP+SPN YSP+SP +YSP+SP +YSPSSP YSPSSP + SP SP+ YSP+
Sbjct: 1711 YSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSP-NVAYSPS-SPNVAYSPS 1768
Query: 272 LP--GYSPSSTGQYTP 231
P YSPSS Y+P
Sbjct: 1769 SPNVAYSPSSPVAYSP 1784
Score = 133 bits (335), Expect = 9e-30
Identities = 83/138 (60%), Positives = 98/138 (71%), Gaps = 18/138 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS---IAYSPS--NARLSPASP- 429
YSPTSP YSPTSP+YSPTSP+Y PTSP+Y+P S YSPS +AYSPS N SP+SP
Sbjct: 1658 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPSSPNVAYSPSSPNVAYSPSSPN 1717
Query: 428 --YSPTSPN--YSPTSP--SYSPTSP--SYSPSSP--TYSPSSPYSSGASPDYSPSAGYS 279
YSP+SPN YSP+SP +YSP+SP +YSPSSP YSPSSP + SP SP+ YS
Sbjct: 1718 VAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSP-NVAYSPS-SPNVAYS 1775
Query: 278 PTLP-GYSPSSTG-QYTP 231
P+ P YSPSS Y+P
Sbjct: 1776 PSSPVAYSPSSPNVAYSP 1793
Score = 126 bits (317), Expect = 1e-27
Identities = 80/140 (57%), Positives = 100/140 (71%), Gaps = 26/140 (18%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSP--SYNPQS-----AKYSPSIAYSPS--NARLSP 438
YSPTSP YSPTSP+YSPTSP+Y P+SP +Y+P S + SP++AYSPS N SP
Sbjct: 1672 YSPTSPAYSPTSPAYSPTSPAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSP 1731
Query: 437 ASP---YSPTSPN--YSPTSP--SYSPTSP--SYSPSSP--TYSPSSPYS-SGASPD--Y 300
+SP YSP+SPN YSP+SP +YSP+SP +YSPSSP YSPSSP + S +SP+ Y
Sbjct: 1732 SSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSSPNVAY 1791
Query: 299 SPSA---GYSPTLPGYSPSS 249
SPS+ YSP+ P +SPSS
Sbjct: 1792 SPSSPNVAYSPSSPAFSPSS 1811
Score = 124 bits (310), Expect = 7e-27
Identities = 78/129 (60%), Positives = 91/129 (70%), Gaps = 9/129 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY-SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPT 417
+SP+SP YSPTSP SPTSP+Y PTSP+Y+P S YSP S AYSP+ SPA YSPT
Sbjct: 1629 FSPSSPAYSPTSPRLVSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT----SPA--YSPT 1682
Query: 416 SPNYSPTSPSYSPTSPS--YSPSSPT--YSPSSPYSSGASPDYSPSAGYSPTLP--GYSP 255
SP YSPTSP+YSP+SP+ YSPSSP YSPSSP + SP SP+ YSP+ P YSP
Sbjct: 1683 SPAYSPTSPAYSPSSPNVAYSPSSPNVAYSPSSP-NVAYSPS-SPNVAYSPSSPNVAYSP 1740
Query: 254 SSTG-QYTP 231
SS Y+P
Sbjct: 1741 SSPNVAYSP 1749
Score = 105 bits (263), Expect = 2e-21
Identities = 67/121 (55%), Positives = 82/121 (67%), Gaps = 9/121 (7%)
Frame = -3
Query: 566 SPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARL-SPASP-YSPTSPNYSPT 396
S T+P+++P SP+ G T +SPS AYSP++ RL SP SP YSPTSP YSPT
Sbjct: 1608 SATTPNWAP-SPAGGGTGTL-----GAFSPSSPAYSPTSPRLVSPTSPAYSPTSPAYSPT 1661
Query: 395 SPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA---GYSPTLP--GYSPSSTG-QYT 234
SP+YSPTSP+YSP+SP YSP+SP S SP YSPS+ YSP+ P YSPSS Y+
Sbjct: 1662 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPSSPNVAYSPSSPNVAYSPSSPNVAYS 1721
Query: 233 P 231
P
Sbjct: 1722 P 1722
Score = 95.1 bits (235), Expect = 4e-18
Identities = 60/139 (43%), Positives = 76/139 (54%), Gaps = 19/139 (13%)
Frame = -3
Query: 590 YSPTSP--GYSPTSPSYSPTSP-------SYGPTSPSYNPQSAKYSPSIAYSPSNARLSP 438
Y SP G+SP + +Y G TSP + ++ +P+ A SP+
Sbjct: 1566 YGSFSPAVGFSPATSTYVGGDAMKDAGRYGLGGTSPFASFSASATTPNWAPSPAGGGTGT 1625
Query: 437 ASPYSPTSPNY--------SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 285
+SP+SP Y SPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S
Sbjct: 1626 LGAFSPSSPAYSPTSPRLVSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA 1685
Query: 284 YSPTLPGYSPSSTG-QYTP 231
YSPT P YSPSS Y+P
Sbjct: 1686 YSPTSPAYSPSSPNVAYSP 1704
[152][TOP]
>UniRef100_B0XMU6 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
RepID=B0XMU6_ASPFC
Length = 1750
Score = 135 bits (339), Expect = 3e-30
Identities = 72/131 (54%), Positives = 90/131 (68%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSPGY---SP---TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP 429
YSPTSPG SP TSP +SP SPS+ PTSP+Y+P S Y + SP++ SP SP
Sbjct: 1586 YSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQA---SPTSPSYSPTSP 1642
Query: 428 -YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP----SAGYSPTLPG 264
+SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP GA SP S Y+PT PG
Sbjct: 1643 GFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPG 1702
Query: 263 YSPSSTGQYTP 231
+SP+S Y+P
Sbjct: 1703 WSPTSPQTYSP 1713
Score = 131 bits (329), Expect = 5e-29
Identities = 72/132 (54%), Positives = 94/132 (71%), Gaps = 18/132 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYG---PTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-Y 426
+SP SP ++PTSP+YSPTSP+YG PTSPSY+P S +SP S YSP++ SPASP +
Sbjct: 1606 FSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAF 1665
Query: 425 SPTSPNYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYS-SGASPDY--SPSAG 285
SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP + S SP++ SP++
Sbjct: 1666 SPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSP 1725
Query: 284 YSPTLPGYSPSS 249
PT PGYSP+S
Sbjct: 1726 GGPTSPGYSPTS 1737
Score = 125 bits (314), Expect = 2e-27
Identities = 66/118 (55%), Positives = 82/118 (69%), Gaps = 6/118 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA----SPYS 423
SPTSP YSPTSP +SPTSP+Y PTSPS++P S +SP S +YSP++ + A SP S
Sbjct: 1631 SPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTS 1690
Query: 422 PTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPS 252
PTSP Y+PTSP +SPTSP +YSP+SP ++ S SP S GYSPT P +SPS
Sbjct: 1691 PTSPKYTPTSPGWSPTSPQTYSPTSPNFA-----GSPTSPGGPTSPGYSPTSPAFSPS 1743
Score = 116 bits (291), Expect = 1e-24
Identities = 63/115 (54%), Positives = 79/115 (68%), Gaps = 14/115 (12%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----Y 426
YSPTSPG+SPTSP+YSPTSPS+ P SP+++P S YSP S A + LSP SP Y
Sbjct: 1637 YSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKY 1696
Query: 425 SPTSPNYSPTSP-SYSPTSPSYS--------PSSPTYSPSSPYSSGASPDYSPSA 288
+PTSP +SPTSP +YSPTSP+++ P+SP YSP+SP SP Y PS+
Sbjct: 1697 TPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSP---AFSPSYVPSS 1748
Score = 107 bits (267), Expect = 7e-22
Identities = 66/129 (51%), Positives = 84/129 (65%), Gaps = 15/129 (11%)
Frame = -3
Query: 590 YSP--TSP-GYSPTSP-SYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYS 423
+SP TSP GYSP+SP S +PTSP Y PTS SY+P S P + + SP +S
Sbjct: 1555 FSPAATSPAGYSPSSPFSANPTSPGYSPTS-SYSPTS----PGMGITSPRFMTSPG--FS 1607
Query: 422 PTSPNYSPTSPSYSPTSPSY---SPSSPTYSPSSPYSSGASPDYSP--------SAGYSP 276
P SP+++PTSP+YSPTSP+Y SP+SP+YSP+SP S SP+YSP S +SP
Sbjct: 1608 PASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSP 1667
Query: 275 TLPGYSPSS 249
T P YSP+S
Sbjct: 1668 TSPSYSPTS 1676
[153][TOP]
>UniRef100_A2QAT7 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QAT7_ASPNC
Length = 1747
Score = 135 bits (339), Expect = 3e-30
Identities = 71/129 (55%), Positives = 88/129 (68%), Gaps = 9/129 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAY---SPSNARLSPASP-Y 426
YSPTSPG + TSP + TSP + P SPS+ P S YSP S AY SP++ SP SP +
Sbjct: 1585 YSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGF 1644
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP----SAGYSPTLPGYS 258
SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP G SP S Y+PT PG+S
Sbjct: 1645 SPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAVGGVGRHLSPTSPTSPKYTPTSPGWS 1704
Query: 257 PSSTGQYTP 231
P+S Y+P
Sbjct: 1705 PTSPQTYSP 1713
Score = 124 bits (310), Expect = 7e-27
Identities = 65/119 (54%), Positives = 82/119 (68%), Gaps = 2/119 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLS-PASPYSPTS 414
YSPTSPG+SPTSP+YSPTSPS+ P SP+++P S YSP+ SP+ + SP SPTS
Sbjct: 1637 YSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPT---SPAVGGVGRHLSPTSPTS 1693
Query: 413 PNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQ 240
P Y+PTSP +SPTSP +YSP+SP ++ S SP S GYSPT P +SP+S Q
Sbjct: 1694 PKYTPTSPGWSPTSPQTYSPTSPNFA-----GSPTSPGGPTSPGYSPTSPAFSPTSPRQ 1747
Score = 107 bits (267), Expect = 7e-22
Identities = 68/138 (49%), Positives = 86/138 (62%), Gaps = 24/138 (17%)
Frame = -3
Query: 590 YSPTSP---GYSPTSPSYSPTSPS-YGPTSP-SYNPQSAKYSPSIAYSPSNARL------ 444
Y PT G+SP + TSP+ Y P+SP S NP S YSP+ +YSP++ +
Sbjct: 1544 YQPTGGFGGGFSPAA-----TSPAGYSPSSPFSANPTSPGYSPTSSYSPTSPGMAITSPR 1598
Query: 443 --------SPASP-YSPTSPNYSPTSPSY---SPTSPSYSPSSPTYSPSSPYSSGASPDY 300
SPASP ++PTSP YSPTSP+Y SPTSPSYSP+SP +SP+SP S SP +
Sbjct: 1599 FMSTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSF 1658
Query: 299 SP-SAGYSPTLPGYSPSS 249
SP S +SPT P YSP+S
Sbjct: 1659 SPASPAFSPTSPSYSPTS 1676
[154][TOP]
>UniRef100_A1D1U9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D1U9_NEOFI
Length = 1750
Score = 135 bits (339), Expect = 3e-30
Identities = 72/131 (54%), Positives = 90/131 (68%), Gaps = 11/131 (8%)
Frame = -3
Query: 590 YSPTSPGY---SP---TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP 429
YSPTSPG SP TSP +SP SPS+ PTSP+Y+P S Y + SP++ SP SP
Sbjct: 1586 YSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQA---SPTSPSYSPTSP 1642
Query: 428 -YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP----SAGYSPTLPG 264
+SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP GA SP S Y+PT PG
Sbjct: 1643 GFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPG 1702
Query: 263 YSPSSTGQYTP 231
+SP+S Y+P
Sbjct: 1703 WSPTSPQTYSP 1713
Score = 131 bits (329), Expect = 5e-29
Identities = 72/132 (54%), Positives = 94/132 (71%), Gaps = 18/132 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYG---PTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-Y 426
+SP SP ++PTSP+YSPTSP+YG PTSPSY+P S +SP S YSP++ SPASP +
Sbjct: 1606 FSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAF 1665
Query: 425 SPTSPNYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYS-SGASPDY--SPSAG 285
SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP + S SP++ SP++
Sbjct: 1666 SPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSP 1725
Query: 284 YSPTLPGYSPSS 249
PT PGYSP+S
Sbjct: 1726 GGPTSPGYSPTS 1737
Score = 125 bits (314), Expect = 2e-27
Identities = 66/118 (55%), Positives = 82/118 (69%), Gaps = 6/118 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA----SPYS 423
SPTSP YSPTSP +SPTSP+Y PTSPS++P S +SP S +YSP++ + A SP S
Sbjct: 1631 SPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTS 1690
Query: 422 PTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPS 252
PTSP Y+PTSP +SPTSP +YSP+SP ++ S SP S GYSPT P +SPS
Sbjct: 1691 PTSPKYTPTSPGWSPTSPQTYSPTSPNFA-----GSPTSPGGPTSPGYSPTSPAFSPS 1743
Score = 116 bits (291), Expect = 1e-24
Identities = 63/115 (54%), Positives = 79/115 (68%), Gaps = 14/115 (12%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP----Y 426
YSPTSPG+SPTSP+YSPTSPS+ P SP+++P S YSP S A + LSP SP Y
Sbjct: 1637 YSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKY 1696
Query: 425 SPTSPNYSPTSP-SYSPTSPSYS--------PSSPTYSPSSPYSSGASPDYSPSA 288
+PTSP +SPTSP +YSPTSP+++ P+SP YSP+SP SP Y PS+
Sbjct: 1697 TPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSP---AFSPSYVPSS 1748
Score = 107 bits (267), Expect = 7e-22
Identities = 66/129 (51%), Positives = 84/129 (65%), Gaps = 15/129 (11%)
Frame = -3
Query: 590 YSP--TSP-GYSPTSP-SYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYS 423
+SP TSP GYSP+SP S +PTSP Y PTS SY+P S P + + SP +S
Sbjct: 1555 FSPAATSPAGYSPSSPFSANPTSPGYSPTS-SYSPTS----PGMGITSPRFMTSPG--FS 1607
Query: 422 PTSPNYSPTSPSYSPTSPSY---SPSSPTYSPSSPYSSGASPDYSP--------SAGYSP 276
P SP+++PTSP+YSPTSP+Y SP+SP+YSP+SP S SP+YSP S +SP
Sbjct: 1608 PASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSP 1667
Query: 275 TLPGYSPSS 249
T P YSP+S
Sbjct: 1668 TSPSYSPTS 1676
[155][TOP]
>UniRef100_C6F1F2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F2_9APIC
Length = 232
Score = 134 bits (338), Expect = 4e-30
Identities = 73/119 (61%), Positives = 80/119 (67%), Gaps = 5/119 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YS TSP YSPTSP YSPTSP Y PTSP Y+P S KYSP+ SP YSPTSP
Sbjct: 56 YSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPT---SPK---------YSPTSP 103
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-ASPDYSP----SAGYSPTLPGYSPSS 249
YSPTSP YSPTSP YSP+SP YSP+SP + +SP YSP S +SPT P YS SS
Sbjct: 104 KYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISS 162
Score = 117 bits (293), Expect = 7e-25
Identities = 62/114 (54%), Positives = 69/114 (60%), Gaps = 2/114 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
+S SP YS TSP YSPTSP Y PTSP Y P S KY SPTSP
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKY-------------------SPTSP 89
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGY--SPTLPGYSP 255
YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP++ +P+ P YSP
Sbjct: 90 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSP 143
Score = 115 bits (288), Expect = 3e-24
Identities = 63/120 (52%), Positives = 72/120 (60%), Gaps = 20/120 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP Y PTSP Y PTSP Y+P S KYSP S YSP++ + SP SP YSPT
Sbjct: 63 YSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 122
Query: 416 SPNYSPTSP------------------SYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 291
SP YSPTSP +SPTSP+YS SSP Y S + + SP+
Sbjct: 123 SPQYSPTSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISSPVYDQSGNARNKSQHPLSPA 182
Score = 68.6 bits (166), Expect = 4e-10
Identities = 43/100 (43%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSP-SYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTS 414
YSPTSP YSPTSP YSPTSP P+SP Y SPY+ S
Sbjct: 112 YSPTSPKYSPTSPQYSPTSPVPNNPSSPHY-----------------------SPYAIAS 148
Query: 413 PNYSPTSPSYSPTSPSYS-----------PSSPTYSPSSP 327
P +SPTSP+YS +SP Y P SP Y SP
Sbjct: 149 PKFSPTSPAYSISSPVYDQSGNARNKSQHPLSPAYILQSP 188
Score = 63.9 bits (154), Expect = 9e-09
Identities = 44/115 (38%), Positives = 49/115 (42%), Gaps = 49/115 (42%)
Frame = -3
Query: 428 YSPTSPN------------------------------------------------YSPTS 393
YSPTSP YS TS
Sbjct: 1 YSPTSPTYHVSNNANAGGSSGLNDTKAFYSPTSPKNQLSEMNPNMMKYHSVVSPVYSVTS 60
Query: 392 PSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P YSPTSP YSP+SP Y P+SP S SP YSP S YSPT P YSP+S +Y+P
Sbjct: 61 PKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP-KYSP 114
[156][TOP]
>UniRef100_C6F0A2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0A2_PLAFA
Length = 223
Score = 134 bits (336), Expect = 7e-30
Identities = 79/157 (50%), Positives = 93/157 (59%), Gaps = 16/157 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSPTSP YSPTSP YSPTSP Y PTSP Y+P S KYSP S YSP++ + SP SP YSPT
Sbjct: 47 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 106
Query: 416 SPNYSPTSPSYSPTSP--------SYSP---SSPTYSPSSPYSSGASPDYSPSA---GYS 279
SP YSPTSP YSPTSP +YSP +SP +SP+SP S +SP Y S +
Sbjct: 107 SPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSPVYDKSGVVNAHQ 166
Query: 278 PTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGN 168
P P Y S Q + D + + A D+ N
Sbjct: 167 PMSPAYILQSPVQIKQNVQDANMFSPIQQAHVDEAKN 203
Score = 129 bits (323), Expect = 2e-28
Identities = 72/135 (53%), Positives = 84/135 (62%), Gaps = 14/135 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-----------YGPTSPSYNPQSAKYSP-SIAYSPSNAR 447
YSPTSP Y+ + YSPTSP Y SP Y+ S KYSP S YSP++ +
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 446 LSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPT 273
SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP S YSPT
Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 120
Query: 272 LPGYSPSSTGQYTPH 228
P ++ Y+P+
Sbjct: 121 SPVAQNIASPNYSPY 135
[157][TOP]
>UniRef100_C4JY44 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JY44_UNCRE
Length = 1747
Score = 132 bits (331), Expect = 3e-29
Identities = 71/132 (53%), Positives = 89/132 (67%), Gaps = 12/132 (9%)
Frame = -3
Query: 590 YSPTSPGY---SP---TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP 429
YSPTSPG SP TSP +SP SPS+ PTSP+Y+P S Y A SP++ SP SP
Sbjct: 1539 YSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPGYGQ--AQSPTSPSYSPTSP 1596
Query: 428 -YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA-----SPDYSPSAGYSPTLP 267
+SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP G SP S Y+PT P
Sbjct: 1597 GFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGVTGRHLSPTSPTSPKYTPTSP 1656
Query: 266 GYSPSSTGQYTP 231
G+SP+S Y+P
Sbjct: 1657 GWSPTSPDAYSP 1668
Score = 126 bits (317), Expect = 1e-27
Identities = 73/142 (51%), Positives = 96/142 (67%), Gaps = 21/142 (14%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYG----PTSPSYNPQSAKYSP-SIAYSPSNARLSPASP- 429
+SP SP ++PTSP+YSPTSP YG PTSPSY+P S +SP S +YSP++ SPASP
Sbjct: 1559 FSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPA 1618
Query: 428 YSPTSPNYSPTSPSY-----------SPTSPSYSPSSPTYSPSSPYS-SGASPDYS---P 294
+SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP + S SP+++
Sbjct: 1619 FSPTSPSYSPTSPALGGVTGRHLSPTSPTSPKYTPTSPGWSPTSPDAYSPTSPNFAGSPT 1678
Query: 293 SAGYSPTLPGYSPSSTGQYTPH 228
S G+S PGYSP+S Y P+
Sbjct: 1679 SPGWSLLPPGYSPTSP-TYNPN 1699
Score = 73.9 bits (180), Expect = 9e-12
Identities = 52/137 (37%), Positives = 64/137 (46%), Gaps = 17/137 (12%)
Frame = -3
Query: 590 YSPTSPGY-----------SPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARL 444
YSPTSP SPTSP Y+PTSP + PTSP
Sbjct: 1626 YSPTSPALGGVTGRHLSPTSPTSPKYTPTSPGWSPTSP---------------------- 1663
Query: 443 SPASPYSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSP--SSP--YSSGASPDYSPSAGY 282
YSPTSPN+ SPTSP +S P YSP+SPTY+P S+P + G S P Y
Sbjct: 1664 ---DAYSPTSPNFAGSPTSPGWSLLPPGYSPTSPTYNPNISAPVKLTLGLSDVLFPIYPY 1720
Query: 281 SPTLPGYSPSSTGQYTP 231
T P Y +++ + P
Sbjct: 1721 LSTTPKYLCTTSCLFYP 1737
Score = 64.7 bits (156), Expect = 5e-09
Identities = 46/122 (37%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI--AYSPSNARLSPASPYSPTS 414
SP +SP G T +Y P +SP+ AR SP YSPTS
Sbjct: 1464 SPMQENMYISSPDPDSQFSPIGQTGSETPAGFTEYQPPGFGGFSPAGAR-SPGGGYSPTS 1522
Query: 413 P-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
P N SPTSP YSP+S YSP+SP SP + S G+SP P ++P+S Y
Sbjct: 1523 PFNTSPTSPGYSPSSG--------YSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPA-Y 1573
Query: 236 TP 231
+P
Sbjct: 1574 SP 1575
[158][TOP]
>UniRef100_B6H9U6 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6H9U6_PENCW
Length = 1733
Score = 132 bits (331), Expect = 3e-29
Identities = 75/138 (54%), Positives = 93/138 (67%), Gaps = 21/138 (15%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYG---PTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-Y 426
+SP SP + PTSP+YSPTSP+YG PTSPSY+P S +SP S YSP++ SPASP +
Sbjct: 1596 FSPASPTFQPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAF 1655
Query: 425 SPTSPNYSPTSPSY---------SPTSPSYSPSSPTYSPSSPYS-SGASPDYS------P 294
SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP S S SP++S
Sbjct: 1656 SPTSPSYSPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQSYSPTSPNFSGSPTSPT 1715
Query: 293 SAGYSPTLPGYSPSSTGQ 240
S YSPT P YSP+S Q
Sbjct: 1716 SPAYSPTSPAYSPTSPRQ 1733
Score = 128 bits (321), Expect = 4e-28
Identities = 72/138 (52%), Positives = 89/138 (64%), Gaps = 19/138 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGP-TSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
SPTSPGYSP+S SYSPTSP G TSP ++P S + P S AYSP++ ASP TS
Sbjct: 1569 SPTSPGYSPSS-SYSPTSPGIGMMTSPGFSPASPTFQPTSPAYSPTSPAYGQASP---TS 1624
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-----------------SAG 285
P+YSPTSP +SPTSP+YSP+SP++SP+SP S SP YSP S
Sbjct: 1625 PSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPK 1684
Query: 284 YSPTLPGYSPSSTGQYTP 231
Y+PT PG+SP+S Y+P
Sbjct: 1685 YTPTSPGWSPTSPQSYSP 1702
Score = 73.6 bits (179), Expect = 1e-11
Identities = 58/138 (42%), Positives = 69/138 (50%), Gaps = 19/138 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP- 411
SP G P S ++SP + A S +SP A SP YSPTSP
Sbjct: 1511 SPYMAGGDPNS-TFSPMHQIGQEPTGGLTEYQATTSTFGGFSP--AARSPGG-YSPTSPF 1566
Query: 410 NYSPTSPSYSP--------------TSPSYSPSSPTYSPSSPYSSGASPDY---SP-SAG 285
N SPTSP YSP TSP +SP+SPT+ P+SP S SP Y SP S
Sbjct: 1567 NTSPTSPGYSPSSSYSPTSPGIGMMTSPGFSPASPTFQPTSPAYSPTSPAYGQASPTSPS 1626
Query: 284 YSPTLPGYSPSSTGQYTP 231
YSPT PG+SP+S Y+P
Sbjct: 1627 YSPTSPGFSPTSP-NYSP 1643
[159][TOP]
>UniRef100_A1CNZ4 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CNZ4_ASPCL
Length = 1765
Score = 132 bits (331), Expect = 3e-29
Identities = 71/147 (48%), Positives = 90/147 (61%), Gaps = 28/147 (19%)
Frame = -3
Query: 587 SPTSPGYSPT-----------------------SPSYSPTSPSYGPTSPSYNPQSAKYSP 477
+PTSPGYSPT SP +SP SPS+ PTSP+Y+P S Y
Sbjct: 1577 NPTSPGYSPTTSYSPIAPGITSPRFNTSPGFMTSPGFSPVSPSFAPTSPAYSPTSPAYGQ 1636
Query: 476 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 300
+ SP++ SP SP +SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP GA
Sbjct: 1637 A---SPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHL 1693
Query: 299 SP----SAGYSPTLPGYSPSSTGQYTP 231
SP S Y+PT PG+SP+S Y+P
Sbjct: 1694 SPTSPTSPKYTPTSPGWSPTSPQTYSP 1720
Score = 131 bits (330), Expect = 3e-29
Identities = 74/138 (53%), Positives = 93/138 (67%), Gaps = 25/138 (18%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYG---PTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-Y 426
+SP SP ++PTSP+YSPTSP+YG PTSPSY+P S +SP S YSP++ SPASP +
Sbjct: 1613 FSPVSPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAF 1672
Query: 425 SPTSPNYSPTSPS-----------------YSPTSPSYSPSSP-TYSPSSPYSSGA--SP 306
SPTSP+YSPTSP+ Y+PTSP +SP+SP TYSP+SP +G+ SP
Sbjct: 1673 SPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSP 1732
Query: 305 DYSPSAGYSPTLPGYSPS 252
S GYSPT P +SPS
Sbjct: 1733 GGPTSPGYSPTSPAFSPS 1750
Score = 77.0 bits (188), Expect = 1e-12
Identities = 53/122 (43%), Positives = 67/122 (54%), Gaps = 22/122 (18%)
Frame = -3
Query: 548 YSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPNYSP--------- 399
Y PT G SP+ A YSP+ +S + P SP YSPT+ +YSP
Sbjct: 1548 YQPTGGFGGGFSPAAT-SPAGYSPTSPFSAN-----PTSPGYSPTT-SYSPIAPGITSPR 1600
Query: 398 --------TSPSYSPTSPSYSPSSPTYSPSSP---YSSGASPDYSP-SAGYSPTLPGYSP 255
TSP +SP SPS++P+SP YSP+SP +S SP YSP S G+SPT P YSP
Sbjct: 1601 FNTSPGFMTSPGFSPVSPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSP 1660
Query: 254 SS 249
+S
Sbjct: 1661 TS 1662
Score = 58.2 bits (139), Expect = 5e-07
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 9/53 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSP-SYSPTSPSY--------GPTSPSYNPQSAKYSPSIAYSP 459
Y+PTSPG+SPTSP +YSPTSP++ GPTSP Y+P S +SPS P
Sbjct: 1703 YTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSPSYVPPP 1755
[160][TOP]
>UniRef100_O77375 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=O77375_PLAF7
Length = 2457
Score = 131 bits (330), Expect = 3e-29
Identities = 75/139 (53%), Positives = 86/139 (61%), Gaps = 25/139 (17%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS------------------YGPTSPSYNPQSAKYSP-SIA 468
YSPTSP Y+ + YSPTSP Y TSP Y+P S KYSP S
Sbjct: 2249 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 2308
Query: 467 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-ASPDYSP 294
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP + ASP+YSP
Sbjct: 2309 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSP 2368
Query: 293 ----SAGYSPTLPGYSPSS 249
S +SPT P YS SS
Sbjct: 2369 YSITSPKFSPTSPAYSISS 2387
Score = 118 bits (295), Expect = 4e-25
Identities = 65/112 (58%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSP-SYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYS 402
SP YSPTSP+Y+ + Y PTSP + N Q S SP + SP YSPTSP YS
Sbjct: 2246 SPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPK--YSPTSPKYS 2303
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
PTSP YSPTSP YSP+SP YSP+SP S SP YSP S YSPT P YSP+S
Sbjct: 2304 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 2355
Score = 94.4 bits (233), Expect = 6e-18
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 75/195 (38%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSP------------------------SYGPTSP--------- 510
+SPT SPTS +SP SP +Y SP
Sbjct: 2160 FSPTQSPKSPTSVMHSPFSPFDHQNQQPVDATNLLFSPKNNNIMNYNVFSPKPNINNNVI 2219
Query: 509 ---------------------SYNPQSAKYSP-SIAYSPSNARLSPASP----------- 429
++N S YSP S Y+ +NA SP SP
Sbjct: 2220 QSPNIYSPNPMLDIFSPKPQINHNIYSPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNS 2279
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSP 276
YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP S YSP
Sbjct: 2280 QYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 2339
Query: 275 TLPGYSPSSTGQYTP 231
T P YSP+S +Y+P
Sbjct: 2340 TSPKYSPTSP-KYSP 2353
Score = 69.7 bits (169), Expect = 2e-10
Identities = 60/182 (32%), Positives = 81/182 (44%), Gaps = 47/182 (25%)
Frame = -3
Query: 569 YSPTSPSYSPTSPSYGPTSP-SYNPQSAKYSPSIAYSPSNARLSPASPYSPT-------- 417
+SPT SPTS + P SP + Q + ++ +SP N + + +SP
Sbjct: 2160 FSPTQSPKSPTSVMHSPFSPFDHQNQQPVDATNLLFSPKNNNIMNYNVFSPKPNINNNVI 2219
Query: 416 -SPN-YSPT-----------------SPSYSPTSPSYSPSSPTYSPSSPYS--------- 321
SPN YSP SPSYSPTSP+Y+ ++ YSP+SP +
Sbjct: 2220 QSPNIYSPNPMLDIFSPKPQINHNIYSPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNS 2279
Query: 320 ---------SGASPDYSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKG 171
S SP YSP S YSPT P YSP+S +Y+P K T K + K
Sbjct: 2280 QYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSP-KYSP-TSPKYSPTSPKYSPTSPKY 2337
Query: 170 NP 165
+P
Sbjct: 2338 SP 2339
[161][TOP]
>UniRef100_B2W4S0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2W4S0_PYRTR
Length = 1742
Score = 131 bits (329), Expect = 5e-29
Identities = 80/142 (56%), Positives = 92/142 (64%), Gaps = 22/142 (15%)
Frame = -3
Query: 590 YSPTSPGY--SPTSPSYSPTSPSYG-PTSPSYNPQS-AKYSP-SIAYSPSNARLSPASPY 426
++ TSPGY SPTSP YSPTSP YG PTSPSY+P S A YSP S YSP++ SP SP
Sbjct: 1596 FAATSPGYMASPTSPHYSPTSPRYGSPTSPSYSPTSPAGYSPTSPQYSPTSPNYSPTSPT 1655
Query: 425 ---SPTSPNYSPTSPSYSPTSPSYSPSSPTY----------SPSSPYSSGASPDYSPSA- 288
TSP YSPTSP YSPTSP YSP+SP Y SP+SP S SP YSP++
Sbjct: 1656 FMGGATSPAYSPTSPQYSPTSPQYSPTSPQYQATSDRRSPTSPTSPQYSPTSPRYSPTSP 1715
Query: 287 --GYSPTLPGYSPSSTG-QYTP 231
+SPT P YSP+S G Y+P
Sbjct: 1716 AGSFSPTSPRYSPTSPGPAYSP 1737
Score = 126 bits (316), Expect = 1e-27
Identities = 80/151 (52%), Positives = 90/151 (59%), Gaps = 32/151 (21%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPS--------------YGPTSPSYNPQSAKY-SP-SIAYSP- 459
SP SPG+SPTSP YSPTSP PTSP Y+P S +Y SP S +YSP
Sbjct: 1571 SPVSPGFSPTSPGYSPTSPGTASPRFAATSPGYMASPTSPHYSPTSPRYGSPTSPSYSPT 1630
Query: 458 SNARLSPASP-YSPTSPNYSP---------TSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 309
S A SP SP YSPTSPNYSP TSP+YSPTSP YSP+SP YSP+SP S
Sbjct: 1631 SPAGYSPTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQYSPTSPQYSPTSPQYQATS 1690
Query: 308 PDYSP----SAGYSPTLPGYSPSS-TGQYTP 231
SP S YSPT P YSP+S G ++P
Sbjct: 1691 DRRSPTSPTSPQYSPTSPRYSPTSPAGSFSP 1721
Score = 110 bits (276), Expect = 6e-23
Identities = 71/133 (53%), Positives = 81/133 (60%), Gaps = 32/133 (24%)
Frame = -3
Query: 590 YSPTSPGY-SPTSPSYSPTSPS-YGPTSPSYNPQSAKYSP----------SIAYSPSNAR 447
YSPTSP Y SPTSPSYSPTSP+ Y PTSP Y+P S YSP S AYSP++ +
Sbjct: 1612 YSPTSPRYGSPTSPSYSPTSPAGYSPTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQ 1671
Query: 446 LSPASP-YSPTSPNY-----------------SPTSPSYSPTSP--SYSPSSPTYSPSSP 327
SP SP YSPTSP Y SPTSP YSPTSP S+SP+SP YSP+SP
Sbjct: 1672 YSPTSPQYSPTSPQYQATSDRRSPTSPTSPQYSPTSPRYSPTSPAGSFSPTSPRYSPTSP 1731
Query: 326 YSSGASPDYSPSA 288
P YSP++
Sbjct: 1732 -----GPAYSPTS 1739
Score = 103 bits (257), Expect = 1e-20
Identities = 56/90 (62%), Positives = 61/90 (67%), Gaps = 5/90 (5%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPNY 405
TSP YSPTSP YSPTSP Y PTSP Y S + SP+ SP SP YSPTSP Y
Sbjct: 1661 TSPAYSPTSPQYSPTSPQYSPTSPQYQATSDRRSPT----------SPTSPQYSPTSPRY 1710
Query: 404 SPTSP--SYSPTSPSYSPSS--PTYSPSSP 327
SPTSP S+SPTSP YSP+S P YSP+SP
Sbjct: 1711 SPTSPAGSFSPTSPRYSPTSPGPAYSPTSP 1740
Score = 91.7 bits (226), Expect = 4e-17
Identities = 49/86 (56%), Positives = 54/86 (62%), Gaps = 12/86 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSY----------GPTSPSYNPQSAKYSPSIAYSPSNARLS 441
YSPTSP YSPTSP YSPTSP Y PTSP Y+P S +YSP+ S
Sbjct: 1665 YSPTSPQYSPTSPQYSPTSPQYQATSDRRSPTSPTSPQYSPTSPRYSPT----------S 1714
Query: 440 PASPYSPTSPNYSPTS--PSYSPTSP 369
PA +SPTSP YSPTS P+YSPTSP
Sbjct: 1715 PAGSFSPTSPRYSPTSPGPAYSPTSP 1740
Score = 77.4 bits (189), Expect = 8e-13
Identities = 48/97 (49%), Positives = 56/97 (57%), Gaps = 19/97 (19%)
Frame = -3
Query: 464 SPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPS--------------YSPSSPTYSPS 333
SP + + SP SP SP +SPTSP YSPTSP SP+SP YSP+
Sbjct: 1556 SPGGSGFTGMSPGFTSPVSPGFSPTSPGYSPTSPGTASPRFAATSPGYMASPTSPHYSPT 1615
Query: 332 SP-YSSGASPDYSPS--AGYSPTLPGYSPSSTGQYTP 231
SP Y S SP YSP+ AGYSPT P YSP+S Y+P
Sbjct: 1616 SPRYGSPTSPSYSPTSPAGYSPTSPQYSPTSP-NYSP 1651
[162][TOP]
>UniRef100_C1H3Q4 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1H3Q4_PARBA
Length = 1748
Score = 130 bits (327), Expect = 8e-29
Identities = 69/132 (52%), Positives = 87/132 (65%), Gaps = 12/132 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSP------SYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP 429
YSPTSPG S TSP +SP SP + PTSP+Y+P S P SP++ SP SP
Sbjct: 1591 YSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTS----PGYQQSPTSPSYSPTSP 1646
Query: 428 -YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA-----SPDYSPSAGYSPTLP 267
+SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP G+ SP S Y+PT P
Sbjct: 1647 GFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSP 1706
Query: 266 GYSPSSTGQYTP 231
G+SP+S Y+P
Sbjct: 1707 GWSPTSPETYSP 1718
Score = 127 bits (320), Expect = 5e-28
Identities = 72/130 (55%), Positives = 87/130 (66%), Gaps = 16/130 (12%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YS 423
++PTSP YSPTSP Y SPTSPSY PTSP ++P S YSP S ++SP++ SP SP YS
Sbjct: 1618 FAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYS 1677
Query: 422 PTSPNY-----------SPTSPSYSPTSPSYSPSSP-TYSPSSPYSSGASPDYSPSAGYS 279
PTSP SPTSP Y+PTSP +SP+SP TYSP+SP SG SP++
Sbjct: 1678 PTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSG-----SPTSPGG 1732
Query: 278 PTLPGYSPSS 249
PT PGYSP+S
Sbjct: 1733 PTSPGYSPTS 1742
Score = 125 bits (314), Expect = 2e-27
Identities = 70/129 (54%), Positives = 84/129 (65%), Gaps = 16/129 (12%)
Frame = -3
Query: 590 YSPTSPGY--SPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPY-- 426
YSPTSPGY SPTSPSYSPTSP + PTSP+Y+P S +SP S A+SP++ SP SP
Sbjct: 1625 YSPTSPGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1684
Query: 425 ----------SPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGASPDYSPSAGYS 279
SPTSP Y+PTSP +SPTSP +YSP+SP +S S SP S GYS
Sbjct: 1685 GSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFS-----GSPTSPGGPTSPGYS 1739
Query: 278 PTLPGYSPS 252
PT P +SP+
Sbjct: 1740 PTSPTFSPT 1748
Score = 121 bits (303), Expect = 5e-26
Identities = 69/123 (56%), Positives = 84/123 (68%), Gaps = 5/123 (4%)
Frame = -3
Query: 590 YSPTSP-GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPT 417
YSP+SP SPTSP YSP+S Y PTSP + S ++ S +SP++ +P SP YSPT
Sbjct: 1570 YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPT 1628
Query: 416 SPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSST 246
SP Y SPTSPSYSPTSP +SP+SP YSP+SP S ASP +SP S YSPT P ST
Sbjct: 1629 SPGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPALG-GST 1687
Query: 245 GQY 237
G++
Sbjct: 1688 GRH 1690
Score = 96.3 bits (238), Expect = 2e-18
Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPS--YGPTSP-SYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
+PG+S + SP Y P+SP + +P S +YSPS YSP++ +S SP +SP
Sbjct: 1551 APGFSGGFSPHGARSPGGGYSPSSPFNTSPTSPRYSPSSGYSPTSPGMSITSPRFMSSPG 1610
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
+SP SP ++PTSP+YSP+SP Y S SP YSP S G+SPT P YSP+S
Sbjct: 1611 FSPASPVFAPTSPAYSPTSPGYQQSP-----TSPSYSPTSPGFSPTSPNYSPTS 1659
Score = 67.4 bits (163), Expect = 8e-10
Identities = 41/77 (53%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Frame = -3
Query: 467 YSPSNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 291
+SP AR SP YSP+SP N SPTSP YSP+S YSP+SP S +SP +SP +SP+
Sbjct: 1558 FSPHGAR-SPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFM-SSPGFSPA 1614
Query: 290 AG-YSPTLPGYSPSSTG 243
+ ++PT P YSP+S G
Sbjct: 1615 SPVFAPTSPAYSPTSPG 1631
[163][TOP]
>UniRef100_Q7SDN0 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q7SDN0_NEUCR
Length = 1752
Score = 130 bits (326), Expect = 1e-28
Identities = 79/147 (53%), Positives = 97/147 (65%), Gaps = 17/147 (11%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSPSY---GPTSPSYNPQSAKYSPSIAYSPSNARLSPASP---YSP 420
+SP +SP+SPS+SPTSP PTSPSY+P S YSP+ SP+ AR SP SP +SP
Sbjct: 1609 SSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPA---SPAAARYSPTSPAQQFSP 1665
Query: 419 TSPNYSPTSPSYSP-------TSPSYSPSSPTYSPSSPYS-SGASPDY--SPSAGYSPTL 270
TSP+YSPTSPSYSP TSPSYSP+SPT+SP+SP + S SP + SP SPT
Sbjct: 1666 TSPSYSPTSPSYSPASPAFQATSPSYSPASPTWSPTSPDAYSPTSPSFQRSPGQQLSPTS 1725
Query: 269 P-GYSPSSTGQYTPHEGDKKDKTGKKD 192
P GYSP+S QY+P + + G D
Sbjct: 1726 PTGYSPTSP-QYSPRTPGRNNSGGNGD 1751
Score = 104 bits (260), Expect = 5e-21
Identities = 61/123 (49%), Positives = 77/123 (62%), Gaps = 6/123 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS---YSPTSPS--YGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPY 426
YSPTSP YSP SP+ YSPTSP+ + PTSPSY+P S YSP+ SPA +
Sbjct: 1637 YSPTSPSYSPASPAAARYSPTSPAQQFSPTSPSYSPTSPSYSPA----------SPA--F 1684
Query: 425 SPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
TSP+YSP SP++SPTSP +YSP+SP++ S G + GYSPT P YSP +
Sbjct: 1685 QATSPSYSPASPTWSPTSPDAYSPTSPSFQ----RSPGQQLSPTSPTGYSPTSPQYSPRT 1740
Query: 248 TGQ 240
G+
Sbjct: 1741 PGR 1743
Score = 99.0 bits (245), Expect = 3e-19
Identities = 63/123 (51%), Positives = 81/123 (65%), Gaps = 4/123 (3%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSP-SYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
S TSP TSP ++PTSP SYG SPS +A YSPS S R + + +SP+SP
Sbjct: 1564 SATSP--RATSP-FTPTSPFSYGGYSPS--SPAAGYSPSSPLLDSAGRFASSPQFSPSSP 1618
Query: 410 NYSPTSPSY---SPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQ 240
++SPTSP SPTSPSYSP+SP+YSP+SP ++ SP SP+ +SPT P YSP+S
Sbjct: 1619 SFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAAARYSPT-SPAQQFSPTSPSYSPTSP-S 1676
Query: 239 YTP 231
Y+P
Sbjct: 1677 YSP 1679
Score = 91.7 bits (226), Expect = 4e-17
Identities = 48/84 (57%), Positives = 59/84 (70%), Gaps = 5/84 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI--AYSPSNA--RLSPASPYS 423
+SPTSP YSPTSPSYSP SP++ TSPSY+P S +SP+ AYSP++ + SP S
Sbjct: 1663 FSPTSPSYSPTSPSYSPASPAFQATSPSYSPASPTWSPTSPDAYSPTSPSFQRSPGQQLS 1722
Query: 422 PTSP-NYSPTSPSYSPTSPSYSPS 354
PTSP YSPTSP YSP +P + S
Sbjct: 1723 PTSPTGYSPTSPQYSPRTPGRNNS 1746
[164][TOP]
>UniRef100_C5PAJ4 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735 delta
SOWgp RepID=C5PAJ4_COCP7
Length = 1746
Score = 130 bits (326), Expect = 1e-28
Identities = 72/134 (53%), Positives = 94/134 (70%), Gaps = 20/134 (14%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYG----PTSPSYNPQSAKYSP-SIAYSPSNARLSPASP- 429
+SP SP ++PTSP+YSPTSP YG PTSPSY+P S +SP S +YSP++ SPASP
Sbjct: 1607 FSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPA 1666
Query: 428 YSPTSPNYSPTSPSY-----------SPTSPSYSPSSPTYSPSSPYS-SGASPDY--SPS 291
+SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+SP + S SP++ SP+
Sbjct: 1667 FSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFAGSPT 1726
Query: 290 AGYSPTLPGYSPSS 249
+ PT PGYSP+S
Sbjct: 1727 SPGGPTSPGYSPTS 1740
Score = 125 bits (315), Expect = 2e-27
Identities = 71/152 (46%), Positives = 88/152 (57%), Gaps = 32/152 (21%)
Frame = -3
Query: 590 YSPTSP-GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP----- 429
YSPTSP SPTSP YSP+S Y PTSP + S +Y S +SP++ +P SP
Sbjct: 1566 YSPTSPFNTSPTSPGYSPSS-GYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPT 1624
Query: 428 -------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-------- 294
SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP
Sbjct: 1625 SPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGA 1684
Query: 293 -----------SAGYSPTLPGYSPSSTGQYTP 231
S Y+PT PG+SP+S Y+P
Sbjct: 1685 TGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSP 1716
Score = 124 bits (310), Expect = 7e-27
Identities = 66/119 (55%), Positives = 82/119 (68%), Gaps = 7/119 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA-----SPY 426
SPTSP YSPTSP +SPTSPSY PTSPS++P S +SP S +YSP++ L A SP
Sbjct: 1633 SPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPT 1692
Query: 425 SPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPS 252
SPTSP Y+PTSP +SPTSP +YSP+SP ++ S SP S GYSPT P ++P+
Sbjct: 1693 SPTSPKYTPTSPGWSPTSPEAYSPTSPNFA-----GSPTSPGGPTSPGYSPTSPTFNPT 1746
Score = 108 bits (270), Expect = 3e-22
Identities = 65/134 (48%), Positives = 82/134 (61%), Gaps = 20/134 (14%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSP-SYNPQSAKYSPSIAYSPSNARL---------- 444
Y P PG+ SP+ + + Y PTSP + +P S YSPS YSP++ +
Sbjct: 1547 YQP--PGFGGFSPAGARSPGGYSPTSPFNTSPTSPGYSPSSGYSPTSPGMSITSPRYMTS 1604
Query: 443 ---SPASP-YSPTSPNYSPTSPSY----SPTSPSYSPSSPTYSPSSPYSSGASPDYSP-S 291
SPASP ++PTSP YSPTSP Y SPTSPSYSP+SP +SP+SP S SP +SP S
Sbjct: 1605 PGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPAS 1664
Query: 290 AGYSPTLPGYSPSS 249
+SPT P YSP+S
Sbjct: 1665 PAFSPTSPSYSPTS 1678
Score = 91.3 bits (225), Expect = 5e-17
Identities = 48/90 (53%), Positives = 63/90 (70%), Gaps = 4/90 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP--YSPT 417
+SP SP +SPTSPSYSPTSP+ G + + ++ SP Y+P++ SP SP YSPT
Sbjct: 1660 FSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPK--YTPTSPGWSPTSPEAYSPT 1717
Query: 416 SPNY--SPTSPSYSPTSPSYSPSSPTYSPS 333
SPN+ SPTSP PTSP YSP+SPT++P+
Sbjct: 1718 SPNFAGSPTSPG-GPTSPGYSPTSPTFNPT 1746
Score = 80.9 bits (198), Expect = 7e-14
Identities = 54/133 (40%), Positives = 68/133 (51%), Gaps = 26/133 (19%)
Frame = -3
Query: 569 YSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPY--SPTSPNYSP- 399
+SP + S T + P P +SP+ A SP SP SP+ SPTSP YSP
Sbjct: 1530 FSPIGQTGSETPAGFTEYQP---PGFGGFSPAGARSPGG--YSPTSPFNTSPTSPGYSPS 1584
Query: 398 ------------------TSPSYSPTSPSYSPSSPTYSPSSP----YSSGASPDYSP-SA 288
TSP +SP SP+++P+SP YSP+SP S SP YSP S
Sbjct: 1585 SGYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSP 1644
Query: 287 GYSPTLPGYSPSS 249
G+SPT P YSP+S
Sbjct: 1645 GFSPTSPSYSPTS 1657
[165][TOP]
>UniRef100_C6F1E9 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1E9_PLAVI
Length = 225
Score = 129 bits (325), Expect = 1e-28
Identities = 71/119 (59%), Positives = 78/119 (65%), Gaps = 5/119 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
+S SP YS TSP YSPTSP Y PTSP Y+P S KYSP+ SP YSPTSP
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPT---SPK---------YSPTSP 96
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-ASPDYSP----SAGYSPTLPGYSPSS 249
YSPTSP YSPTSP YSP+SP YSPSSP + +SP YSP S +SPT P YS SS
Sbjct: 97 KYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISS 155
Score = 117 bits (292), Expect = 9e-25
Identities = 61/106 (57%), Positives = 73/106 (68%), Gaps = 6/106 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPY--SP 420
YSPTSP YSPTSP YSPTSP Y PTSP Y+P S KYSP S YSP++ + SP+SP +P
Sbjct: 70 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNP 129
Query: 419 TSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 291
+SP+YSP SP +SPTSP+YS SSP Y S S + SP+
Sbjct: 130 SSPHYSPYAIASPKFSPTSPAYSISSPVYDQSGNARSKSQHPLSPA 175
Score = 114 bits (285), Expect = 6e-24
Identities = 66/136 (48%), Positives = 80/136 (58%), Gaps = 24/136 (17%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS-------YSPTSPSYGPTSPS-----YNPQSAKYSPSIA------- 468
YSPTSP Y T+P+ + T Y PTSP+ NP KY ++
Sbjct: 1 YSPTSPTYHLTNPASGGGSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTS 60
Query: 467 --YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 297
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YS
Sbjct: 61 PKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYS 120
Query: 296 PSAGY--SPTLPGYSP 255
PS+ +P+ P YSP
Sbjct: 121 PSSPVPNNPSSPHYSP 136
[166][TOP]
>UniRef100_C8VQG7 DNA-directed RNA polymerase (EC 2.7.7.6)
[Source:UniProtKB/TrEMBL;Acc:Q873Q6] n=2 Tax=Emericella
nidulans RepID=C8VQG7_EMENI
Length = 1745
Score = 129 bits (324), Expect = 2e-28
Identities = 66/118 (55%), Positives = 82/118 (69%), Gaps = 1/118 (0%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSPG+SPTSP+YSPTSPS+ PTSP+++P S YSP+ SP+ SP SPTSP
Sbjct: 1636 YSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSYSPT---SPAIGGARHLSPTSPTSP 1692
Query: 410 NYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQ 240
Y+PTSP +SPTSP +YSP+SP ++ S SP S GYSPT P +SP+S Q
Sbjct: 1693 KYTPTSPGWSPTSPQTYSPTSPNFA-----GSPTSPGGPTSPGYSPTSPAFSPTSPRQ 1745
Score = 127 bits (319), Expect = 7e-28
Identities = 69/140 (49%), Positives = 87/140 (62%), Gaps = 21/140 (15%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPY----SP 420
+PTSPGYSPTS SYSPTSP G TSP + S +++P++ SP SP SP
Sbjct: 1573 NPTSPGYSPTS-SYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASP 1631
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-----------------S 291
TSP+YSPTSP +SPTSP+YSP+SP++SP+SP S SP YSP S
Sbjct: 1632 TSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSYSPTSPAIGGARHLSPTSPTS 1691
Query: 290 AGYSPTLPGYSPSSTGQYTP 231
Y+PT PG+SP+S Y+P
Sbjct: 1692 PKYTPTSPGWSPTSPQTYSP 1711
Score = 109 bits (272), Expect = 2e-22
Identities = 67/128 (52%), Positives = 87/128 (67%), Gaps = 8/128 (6%)
Frame = -3
Query: 590 YSP--TSP-GYSPTSP-SYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYS 423
+SP TSP GYSP+SP S +PTSP Y PTS SY+P S P + + SP +S
Sbjct: 1554 FSPAATSPAGYSPSSPFSANPTSPGYSPTS-SYSPTS----PGMGITSPRFMTSPG--FS 1606
Query: 422 PTSPNYSPTSPSYSPTSPSY---SPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSP 255
P SP+++PTSP+YSPTSP+Y SP+SP+YSP+SP S SP+YSP S +SPT P +SP
Sbjct: 1607 PASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSP 1666
Query: 254 SSTGQYTP 231
+S Y+P
Sbjct: 1667 TSP-SYSP 1673
Score = 104 bits (259), Expect = 6e-21
Identities = 60/117 (51%), Positives = 77/117 (65%), Gaps = 3/117 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-YGPTSP-SYNPQSAKYSPSIAYSPSNARLSPASPYSPT 417
Y P S G+ SP+ TSP+ Y P+SP S NP S YSP+ +YSP++ + SP T
Sbjct: 1545 YQP-SGGFGGFSPA--ATSPAGYSPSSPFSANPTSPGYSPTSSYSPTSPGMGITSPRFMT 1601
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SP +SP SPS++PTSP+YSP+SP Y +SP SP YSP S G+SPT P YSP+S
Sbjct: 1602 SPGFSPASPSFAPTSPAYSPTSPAYGQASP----TSPSYSPTSPGFSPTSPNYSPTS 1654
Score = 65.9 bits (159), Expect = 2e-09
Identities = 49/112 (43%), Positives = 61/112 (54%), Gaps = 26/112 (23%)
Frame = -3
Query: 488 KYSPSIAYSP-SNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSP-------------S 354
+Y PS + S A SPA YSP+SP + +PTSP YSPTS SYSP +
Sbjct: 1544 EYQPSGGFGGFSPAATSPAG-YSPSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFMT 1601
Query: 353 SPTYSPSSPYSSGASPDYSP-----------SAGYSPTLPGYSPSSTGQYTP 231
SP +SP+SP + SP YSP S YSPT PG+SP+S Y+P
Sbjct: 1602 SPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSP-NYSP 1652
[167][TOP]
>UniRef100_C0SE75 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0SE75_PARBP
Length = 2106
Score = 129 bits (323), Expect = 2e-28
Identities = 74/128 (57%), Positives = 87/128 (67%), Gaps = 15/128 (11%)
Frame = -3
Query: 590 YSPTSPGY--SPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP--- 429
YSPTSPGY SPTSPSYSPTSP + PTSPSY+P S +SP S A+SP++ SP SP
Sbjct: 1620 YSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1679
Query: 428 ------YSPTSPNYSPTSPSYSPTSPSYSPSSP-TYSPSSPYSSGA--SPDYSPSAGYSP 276
SPT SPTSP Y+PTSP +SP+SP TYSP+SP SG+ SP S GYSP
Sbjct: 1680 GSTGRHLSPT----SPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSP 1735
Query: 275 TLPGYSPS 252
T P +SP+
Sbjct: 1736 TSPTFSPT 1743
Score = 122 bits (306), Expect = 2e-26
Identities = 69/150 (46%), Positives = 88/150 (58%), Gaps = 30/150 (20%)
Frame = -3
Query: 590 YSPTSP-GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP----- 429
YSP+SP SPTSP YSP+S Y PTSP + S ++ S +SP++ +P SP
Sbjct: 1565 YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPT 1623
Query: 428 -----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP---------- 294
SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP
Sbjct: 1624 SPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTG 1683
Query: 293 ---------SAGYSPTLPGYSPSSTGQYTP 231
S Y+PT PG+SP+S Y+P
Sbjct: 1684 RHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1713
Score = 96.3 bits (238), Expect = 2e-18
Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPS--YGPTSP-SYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
+PG+S + SP Y P+SP + +P S +YSPS YSP++ +S SP +SP
Sbjct: 1546 APGFSGGFSPHGARSPGGGYSPSSPFNTSPTSPRYSPSSGYSPTSPGMSITSPRFMSSPG 1605
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
+SP SP ++PTSP+YSP+SP Y S SP YSP S G+SPT P YSP+S
Sbjct: 1606 FSPASPVFAPTSPAYSPTSPGYQQSP-----TSPSYSPTSPGFSPTSPSYSPTS 1654
Score = 93.2 bits (230), Expect = 1e-17
Identities = 49/93 (52%), Positives = 65/93 (69%), Gaps = 4/93 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP--YSPT 417
+SP SP +SPTSPSYSPTSP+ G ++ + ++ SP Y+P++ SP SP YSPT
Sbjct: 1657 FSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPK--YTPTSPGWSPTSPETYSPT 1714
Query: 416 SPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPY 324
SPN+ SPTSP PTSP YSP+SPT+SP+ +
Sbjct: 1715 SPNFSGSPTSPG-GPTSPGYSPTSPTFSPTCSF 1746
Score = 67.4 bits (163), Expect = 8e-10
Identities = 41/77 (53%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Frame = -3
Query: 467 YSPSNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 291
+SP AR SP YSP+SP N SPTSP YSP+S YSP+SP S +SP +SP +SP+
Sbjct: 1553 FSPHGAR-SPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFM-SSPGFSPA 1609
Query: 290 AG-YSPTLPGYSPSSTG 243
+ ++PT P YSP+S G
Sbjct: 1610 SPVFAPTSPAYSPTSPG 1626
[168][TOP]
>UniRef100_C1GHL1 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb18 RepID=C1GHL1_PARBD
Length = 1746
Score = 128 bits (321), Expect = 4e-28
Identities = 72/130 (55%), Positives = 85/130 (65%), Gaps = 16/130 (12%)
Frame = -3
Query: 590 YSPTSPGY--SPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPY-- 426
YSPTSPGY SPTSPSYSPTSP + PTSPSY+P S +SP S A+SP++ SP SP
Sbjct: 1620 YSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1679
Query: 425 ----------SPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGASPDYSPSAGYS 279
SPTSP Y+PTSP +SPTSP +YSP+SP +S S SP S GYS
Sbjct: 1680 GSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFS-----GSPTSPGGPTSPGYS 1734
Query: 278 PTLPGYSPSS 249
PT P +SP+S
Sbjct: 1735 PTSPTFSPTS 1744
Score = 122 bits (306), Expect = 2e-26
Identities = 69/150 (46%), Positives = 88/150 (58%), Gaps = 30/150 (20%)
Frame = -3
Query: 590 YSPTSP-GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP----- 429
YSP+SP SPTSP YSP+S Y PTSP + S ++ S +SP++ +P SP
Sbjct: 1565 YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPT 1623
Query: 428 -----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP---------- 294
SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP
Sbjct: 1624 SPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTG 1683
Query: 293 ---------SAGYSPTLPGYSPSSTGQYTP 231
S Y+PT PG+SP+S Y+P
Sbjct: 1684 RHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1713
Score = 97.8 bits (242), Expect = 6e-19
Identities = 51/93 (54%), Positives = 67/93 (72%), Gaps = 4/93 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP--YSPT 417
+SP SP +SPTSPSYSPTSP+ G ++ + ++ SP Y+P++ SP SP YSPT
Sbjct: 1657 FSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPK--YTPTSPGWSPTSPETYSPT 1714
Query: 416 SPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPY 324
SPN+ SPTSP PTSP YSP+SPT+SP+SP+
Sbjct: 1715 SPNFSGSPTSPG-GPTSPGYSPTSPTFSPTSPH 1746
Score = 96.3 bits (238), Expect = 2e-18
Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPS--YGPTSP-SYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
+PG+S + SP Y P+SP + +P S +YSPS YSP++ +S SP +SP
Sbjct: 1546 APGFSGGFSPHGARSPGGGYSPSSPFNTSPTSPRYSPSSGYSPTSPGMSITSPRFMSSPG 1605
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
+SP SP ++PTSP+YSP+SP Y S SP YSP S G+SPT P YSP+S
Sbjct: 1606 FSPASPVFAPTSPAYSPTSPGYQQSP-----TSPSYSPTSPGFSPTSPSYSPTS 1654
Score = 67.4 bits (163), Expect = 8e-10
Identities = 41/77 (53%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Frame = -3
Query: 467 YSPSNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 291
+SP AR SP YSP+SP N SPTSP YSP+S YSP+SP S +SP +SP +SP+
Sbjct: 1553 FSPHGAR-SPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFM-SSPGFSPA 1609
Query: 290 AG-YSPTLPGYSPSSTG 243
+ ++PT P YSP+S G
Sbjct: 1610 SPVFAPTSPAYSPTSPG 1626
[169][TOP]
>UniRef100_C6F0A4 RNA polymerase II (Fragment) n=2 Tax=Plasmodium (Laverania)
RepID=C6F0A4_PLAFA
Length = 202
Score = 127 bits (320), Expect = 5e-28
Identities = 73/132 (55%), Positives = 84/132 (63%), Gaps = 18/132 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSP-----------SYGPTSPSYNPQSAKYSP-SIAYSPSNAR 447
YSPTSP Y+ + YSPTSP Y SP Y+ S KYSP S YSP++ +
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 446 LSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-ASPDYSP----SAG 285
SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP + ASP+YSP S
Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPK 120
Query: 284 YSPTLPGYSPSS 249
+SPT P YS SS
Sbjct: 121 FSPTSPAYSISS 132
Score = 115 bits (287), Expect = 3e-24
Identities = 59/92 (64%), Positives = 66/92 (71%), Gaps = 6/92 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP-- 420
YSPTSP YSPTSP YSPTSP Y PTSP Y+P S KYSP S YSP++ + SP SP +
Sbjct: 47 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNI 106
Query: 419 TSPNYSP---TSPSYSPTSPSYSPSSPTYSPS 333
SPNYSP TSP +SPTSP+YS SSP Y S
Sbjct: 107 ASPNYSPYSITSPKFSPTSPAYSISSPVYDKS 138
Score = 108 bits (271), Expect = 2e-22
Identities = 61/116 (52%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = -3
Query: 569 YSPTSPSYSPTSPSYGPTSP-SYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTS 393
YSPTSP+Y+ + Y PTSP + N Q S SP + SP YSPTSP YSPTS
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPK--YSPTSPKYSPTS 58
Query: 392 PSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTPH 228
P YSPTSP YSP+SP YSP+SP S SP YSP S YSPT P ++ Y+P+
Sbjct: 59 PKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPY 114
[170][TOP]
>UniRef100_C5GKA7 DNA-directed RNA polymerase n=2 Tax=Ajellomyces dermatitidis
RepID=C5GKA7_AJEDR
Length = 1746
Score = 127 bits (320), Expect = 5e-28
Identities = 72/133 (54%), Positives = 86/133 (64%), Gaps = 16/133 (12%)
Frame = -3
Query: 590 YSPTSPGY--SPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPY-- 426
YSPTSPGY SPTSPSYSPTSP + PTSPSY+P S +SP S A+SP++ SP SP
Sbjct: 1619 YSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALG 1678
Query: 425 ----------SPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGASPDYSPSAGYS 279
SPTSP Y+PTSP +SPTSP +YSP+SP +S S SP S GYS
Sbjct: 1679 ISTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFS-----GSPTSPGGPTSPGYS 1733
Query: 278 PTLPGYSPSSTGQ 240
PT P ++P+S Q
Sbjct: 1734 PTSPTFNPTSPRQ 1746
Score = 124 bits (312), Expect = 4e-27
Identities = 70/150 (46%), Positives = 88/150 (58%), Gaps = 30/150 (20%)
Frame = -3
Query: 590 YSPTSP-GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP----- 429
YSPTSP SPTSP YSP+S Y PTSP + S ++ S +SP++ +P SP
Sbjct: 1564 YSPTSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPT 1622
Query: 428 -----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP---------- 294
SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP
Sbjct: 1623 SPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGISTG 1682
Query: 293 ---------SAGYSPTLPGYSPSSTGQYTP 231
S Y+PT PG+SP+S Y+P
Sbjct: 1683 RHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1712
Score = 97.4 bits (241), Expect = 7e-19
Identities = 57/120 (47%), Positives = 75/120 (62%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPT--SPGYSPTSPSYSPTSPS--YGPTSP-SYNPQSAKYSPSIAYSPSNARLSPASPY 426
Y P+ S G+SP + SP Y PTSP + +P S +YSPS YSP++ +S SP
Sbjct: 1543 YQPSGFSGGFSP----HGARSPGGGYSPTSPFNTSPTSPRYSPSSGYSPTSPGMSITSPR 1598
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
+SP +SP SP+++PTSP+YSP+SP Y S SP YSP S G+SPT P YSP+S
Sbjct: 1599 FMSSPGFSPASPAFAPTSPAYSPTSPGYQQSP-----TSPSYSPTSPGFSPTSPSYSPTS 1653
Score = 64.7 bits (156), Expect = 5e-09
Identities = 42/90 (46%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Frame = -3
Query: 488 KYSPSI---AYSPSNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 321
+Y PS +SP AR SP YSPTSP N SPTSP YSP+S YSP+SP
Sbjct: 1542 EYQPSGFSGGFSPHGAR-SPGGGYSPTSPFNTSPTSPRYSPSSG--------YSPTSPGM 1592
Query: 320 SGASPDYSPSAGYSPTLPGYSPSSTGQYTP 231
S SP + S G+SP P ++P+S Y+P
Sbjct: 1593 SITSPRFMSSPGFSPASPAFAPTSPA-YSP 1621
[171][TOP]
>UniRef100_P14248 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Plasmodium
falciparum CDC/Honduras RepID=RPB1_PLAFD
Length = 2452
Score = 127 bits (320), Expect = 5e-28
Identities = 73/132 (55%), Positives = 84/132 (63%), Gaps = 18/132 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSP-----------SYGPTSPSYNPQSAKYSP-SIAYSPSNAR 447
YSPTSP Y+ + YSPTSP Y SP Y+ S KYSP S YSP++ +
Sbjct: 2251 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 2310
Query: 446 LSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-ASPDYSP----SAG 285
SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP + ASP+YSP S
Sbjct: 2311 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPK 2370
Query: 284 YSPTLPGYSPSS 249
+SPT P YS SS
Sbjct: 2371 FSPTSPAYSISS 2382
Score = 115 bits (287), Expect = 3e-24
Identities = 59/92 (64%), Positives = 66/92 (71%), Gaps = 6/92 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP-- 420
YSPTSP YSPTSP YSPTSP Y PTSP Y+P S KYSP S YSP++ + SP SP +
Sbjct: 2297 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNI 2356
Query: 419 TSPNYSP---TSPSYSPTSPSYSPSSPTYSPS 333
SPNYSP TSP +SPTSP+YS SSP Y S
Sbjct: 2357 ASPNYSPYSITSPKFSPTSPAYSISSPVYDKS 2388
Score = 113 bits (282), Expect = 1e-23
Identities = 63/119 (52%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSP-SYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYS 402
SP YSPTSP+Y+ + Y PTSP + N Q S SP + SP YSPTSP YS
Sbjct: 2248 SPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPK--YSPTSPKYS 2305
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTPH 228
PTSP YSPTSP YSP+SP YSP+SP S SP YSP S YSPT P ++ Y+P+
Sbjct: 2306 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPY 2364
Score = 93.2 bits (230), Expect = 1e-17
Identities = 70/189 (37%), Positives = 80/189 (42%), Gaps = 75/189 (39%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSP------------------------SYGPTSP--------- 510
+SPT SPTS +SP SP +Y SP
Sbjct: 2162 FSPTQSPKSPTSVMHSPFSPFDHQNQQPVDATNLLFSPKNNNIMNYNVFSPKPNINNNVI 2221
Query: 509 ---------------------SYNPQSAKYSP-SIAYSPSNARLSPASP----------- 429
++N S YSP S Y+ +NA SP SP
Sbjct: 2222 QSPNIYSPNPMLDIFSPKPQINHNIYSPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNS 2281
Query: 428 --------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSP 276
YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP S YSP
Sbjct: 2282 QYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 2341
Query: 275 TLPGYSPSS 249
T P YSP+S
Sbjct: 2342 TSPKYSPTS 2350
Score = 69.7 bits (169), Expect = 2e-10
Identities = 60/182 (32%), Positives = 81/182 (44%), Gaps = 47/182 (25%)
Frame = -3
Query: 569 YSPTSPSYSPTSPSYGPTSP-SYNPQSAKYSPSIAYSPSNARLSPASPYSPT-------- 417
+SPT SPTS + P SP + Q + ++ +SP N + + +SP
Sbjct: 2162 FSPTQSPKSPTSVMHSPFSPFDHQNQQPVDATNLLFSPKNNNIMNYNVFSPKPNINNNVI 2221
Query: 416 -SPN-YSPT-----------------SPSYSPTSPSYSPSSPTYSPSSPYS--------- 321
SPN YSP SPSYSPTSP+Y+ ++ YSP+SP +
Sbjct: 2222 QSPNIYSPNPMLDIFSPKPQINHNIYSPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNS 2281
Query: 320 ---------SGASPDYSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKG 171
S SP YSP S YSPT P YSP+S +Y+P K T K + K
Sbjct: 2282 QYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSP-KYSP-TSPKYSPTSPKYSPTSPKY 2339
Query: 170 NP 165
+P
Sbjct: 2340 SP 2341
[172][TOP]
>UniRef100_C6F1F3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F3_9APIC
Length = 225
Score = 127 bits (318), Expect = 9e-28
Identities = 70/119 (58%), Positives = 77/119 (64%), Gaps = 5/119 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
+S SP YS TSP YSPTSP Y PTSP Y P S KYSP+ SP YSPTSP
Sbjct: 49 HSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPT---SPK---------YSPTSP 96
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-ASPDYSP----SAGYSPTLPGYSPSS 249
YSPTSP YSPTSP YSP+SP YSP+SP + +SP YSP S +SPT P YS SS
Sbjct: 97 KYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISS 155
Score = 113 bits (282), Expect = 1e-23
Identities = 59/106 (55%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPY--SP 420
YSPTSP Y PTSP YSPTSP Y PTSP Y+P S KYSP S YSP++ + SP SP +P
Sbjct: 70 YSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNP 129
Query: 419 TSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 291
+SP+YSP SP +SPTSP+YS SSP Y S + + SP+
Sbjct: 130 SSPHYSPYAIASPKFSPTSPAYSISSPVYDQSGNARNKSQHPLSPA 175
Score = 110 bits (276), Expect = 6e-23
Identities = 66/137 (48%), Positives = 79/137 (57%), Gaps = 16/137 (11%)
Frame = -3
Query: 590 YSPTSPGYSPT-------SPSYSPTSPSYGPTSPS-----YNPQSAKYSPSIA--YSPSN 453
YSPTSP Y + S + T Y PTSP NP KY ++ YS ++
Sbjct: 1 YSPTSPTYHLSNNANAGGSSGLNDTKAFYSPTSPKNQLSEMNPNMMKYHSVVSPVYSVTS 60
Query: 452 ARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYS 279
+ SP SP YSPTSP Y PTSP YSPTSP YSP+SP YSP+SP S SP YSP S YS
Sbjct: 61 PKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYS 120
Query: 278 PTLPGYSPSSTGQYTPH 228
PT P + S+ Y+P+
Sbjct: 121 PTSPVPNNPSSPHYSPY 137
Score = 68.6 bits (166), Expect = 4e-10
Identities = 43/100 (43%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSP-SYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTS 414
YSPTSP YSPTSP YSPTSP P+SP Y SPY+ S
Sbjct: 105 YSPTSPKYSPTSPQYSPTSPVPNNPSSPHY-----------------------SPYAIAS 141
Query: 413 PNYSPTSPSYSPTSPSYS-----------PSSPTYSPSSP 327
P +SPTSP+YS +SP Y P SP Y SP
Sbjct: 142 PKFSPTSPAYSISSPVYDQSGNARNKSQHPLSPAYILQSP 181
[173][TOP]
>UniRef100_Q4P7Q0 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4P7Q0_USTMA
Length = 1774
Score = 126 bits (316), Expect = 1e-27
Identities = 70/126 (55%), Positives = 83/126 (65%), Gaps = 9/126 (7%)
Frame = -3
Query: 581 TSPGYSPTSPSY--SPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPY----SP 420
TSP YSPTSP TSPSY PTSPSY+P S YSPS SP+ A SP+SP +
Sbjct: 1590 TSPAYSPTSPRIFGGATSPSYSPTSPSYSPASPNYSPS---SPAGAGYSPSSPAGRYGAA 1646
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS---PSAGYSPTLPGYSPSS 249
TSP YSP SP +SPTSP+YSP+SP Y+P+SP S SP + G+SPT P YSP+S
Sbjct: 1647 TSPQYSPASPKFSPTSPNYSPASPAYTPTSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTS 1706
Query: 248 TGQYTP 231
QY+P
Sbjct: 1707 P-QYSP 1711
Score = 125 bits (315), Expect = 2e-27
Identities = 82/179 (45%), Positives = 96/179 (53%), Gaps = 59/179 (32%)
Frame = -3
Query: 590 YSPTSPGYSP-------------------------TSPSYSP---------TSPSYGPTS 513
+SP SPGY P TSP+YSP TSPSY PTS
Sbjct: 1555 FSPVSPGYVPTSPGYATSPAGALGGMSPWTGNMGATSPAYSPTSPRIFGGATSPSYSPTS 1614
Query: 512 PSYNPQSAKYSPS----IAYSPS----------NARLSPASP-YSPTSPNYSPTSPSYSP 378
PSY+P S YSPS YSPS + + SPASP +SPTSPNYSP SP+Y+P
Sbjct: 1615 PSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSPQYSPASPKFSPTSPNYSPASPAYTP 1674
Query: 377 TSPSYSPSSPT---------YSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
TSP YSP+SP +SP+SP S SP YSP S +SPT P YSP+S QY+P
Sbjct: 1675 TSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTSPQYSPASPAFSPTSPQYSPASP-QYSP 1732
Score = 122 bits (306), Expect = 2e-26
Identities = 65/132 (49%), Positives = 78/132 (59%), Gaps = 31/132 (23%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSP--------------------TSPSYGPTSPSYNPQSAKYSP-S 474
YSPTSP YSP SP+YSP TSP Y P SP ++P S YSP S
Sbjct: 1610 YSPTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSPQYSPASPKFSPTSPNYSPAS 1669
Query: 473 IAYSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 324
AY+P++ SP SP +SPTSP YSPTSP YSP SP++SP+SP YSP+SP
Sbjct: 1670 PAYTPTSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTSPQYSPASPAFSPTSPQYSPASPQ 1729
Query: 323 SSGASPDYSPSA 288
S SP YSP++
Sbjct: 1730 YSPTSPQYSPTS 1741
Score = 118 bits (295), Expect = 4e-25
Identities = 63/115 (54%), Positives = 75/115 (65%), Gaps = 1/115 (0%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTS 414
YSP SP +SPTSP+YSP SP+Y PTSP Y+P S P++A SP SP YSPTS
Sbjct: 1651 YSPASPKFSPTSPNYSPASPAYTPTSPVYSPTS----PAMAGRGGGKGFSPTSPAYSPTS 1706
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
P YSP SP++SPTSP YSP+SP YSP+SP S SP G S PG + +S
Sbjct: 1707 PQYSPASPAFSPTSPQYSPASPQYSPTSPQYSPTSPAMG-MGGASAGGPGAAAAS 1760
Score = 108 bits (271), Expect = 2e-22
Identities = 68/132 (51%), Positives = 82/132 (62%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPS-----YNPQSAKY-SPSIAYSPSNARLSPASPY 426
SP G+SP SP Y PTSP Y TSP+ +P + + S AYSP++ R+ +
Sbjct: 1549 SPAGYGFSPVSPGYVPTSPGYA-TSPAGALGGMSPWTGNMGATSPAYSPTSPRIFGGA-- 1605
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPT---YSPSSP---YSSGASPDYSP-SAGYSPTLP 267
TSP+YSPTSPSYSP SP+YSPSSP YSPSSP Y + SP YSP S +SPT P
Sbjct: 1606 --TSPSYSPTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSPQYSPASPKFSPTSP 1663
Query: 266 GYSPSSTGQYTP 231
YSP+S YTP
Sbjct: 1664 NYSPASPA-YTP 1674
[174][TOP]
>UniRef100_Q1E2G9 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
RepID=Q1E2G9_COCIM
Length = 1750
Score = 126 bits (316), Expect = 1e-27
Identities = 68/123 (55%), Positives = 84/123 (68%), Gaps = 7/123 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA-----SPY 426
SPTSP YSPTSP +SPTSPSY PTSPS++P S +SP S +YSP++ L A SP
Sbjct: 1633 SPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSPT 1692
Query: 425 SPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
SPTSP Y+PTSP +SPTSP +YSP+SP ++ S SP S GYSPT P ++P+S
Sbjct: 1693 SPTSPKYTPTSPGWSPTSPEAYSPTSPNFA-----GSPTSPGGPTSPGYSPTSPTFNPTS 1747
Query: 248 TGQ 240
Q
Sbjct: 1748 PRQ 1750
Score = 125 bits (315), Expect = 2e-27
Identities = 71/152 (46%), Positives = 88/152 (57%), Gaps = 32/152 (21%)
Frame = -3
Query: 590 YSPTSP-GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP----- 429
YSPTSP SPTSP YSP+S Y PTSP + S +Y S +SP++ +P SP
Sbjct: 1566 YSPTSPFNTSPTSPGYSPSS-GYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPT 1624
Query: 428 -------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-------- 294
SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP
Sbjct: 1625 SPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGA 1684
Query: 293 -----------SAGYSPTLPGYSPSSTGQYTP 231
S Y+PT PG+SP+S Y+P
Sbjct: 1685 TGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSP 1716
Score = 108 bits (270), Expect = 3e-22
Identities = 65/134 (48%), Positives = 82/134 (61%), Gaps = 20/134 (14%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSP-SYNPQSAKYSPSIAYSPSNARL---------- 444
Y P PG+ SP+ + + Y PTSP + +P S YSPS YSP++ +
Sbjct: 1547 YQP--PGFGGFSPAGARSPGGYSPTSPFNTSPTSPGYSPSSGYSPTSPGMSITSPRYMTS 1604
Query: 443 ---SPASP-YSPTSPNYSPTSPSY----SPTSPSYSPSSPTYSPSSPYSSGASPDYSP-S 291
SPASP ++PTSP YSPTSP Y SPTSPSYSP+SP +SP+SP S SP +SP S
Sbjct: 1605 PGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPAS 1664
Query: 290 AGYSPTLPGYSPSS 249
+SPT P YSP+S
Sbjct: 1665 PAFSPTSPSYSPTS 1678
Score = 95.5 bits (236), Expect = 3e-18
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 4/92 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP--YSPT 417
+SP SP +SPTSPSYSPTSP+ G + + ++ SP Y+P++ SP SP YSPT
Sbjct: 1660 FSPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPK--YTPTSPGWSPTSPEAYSPT 1717
Query: 416 SPNY--SPTSPSYSPTSPSYSPSSPTYSPSSP 327
SPN+ SPTSP PTSP YSP+SPT++P+SP
Sbjct: 1718 SPNFAGSPTSPG-GPTSPGYSPTSPTFNPTSP 1748
Score = 80.9 bits (198), Expect = 7e-14
Identities = 54/133 (40%), Positives = 68/133 (51%), Gaps = 26/133 (19%)
Frame = -3
Query: 569 YSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPY--SPTSPNYSP- 399
+SP + S T + P P +SP+ A SP SP SP+ SPTSP YSP
Sbjct: 1530 FSPIGQTGSETPAGFTEYQP---PGFGGFSPAGARSPGG--YSPTSPFNTSPTSPGYSPS 1584
Query: 398 ------------------TSPSYSPTSPSYSPSSPTYSPSSP----YSSGASPDYSP-SA 288
TSP +SP SP+++P+SP YSP+SP S SP YSP S
Sbjct: 1585 SGYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSP 1644
Query: 287 GYSPTLPGYSPSS 249
G+SPT P YSP+S
Sbjct: 1645 GFSPTSPSYSPTS 1657
[175][TOP]
>UniRef100_B2AA31 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2AA31_PODAN
Length = 1748
Score = 126 bits (316), Expect = 1e-27
Identities = 73/145 (50%), Positives = 90/145 (62%), Gaps = 20/145 (13%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY---SPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSP 420
+SP+SP +SPTSP SPTSPSY PTSPSY+P S + + YSP+ SPA SP
Sbjct: 1610 FSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASP--AATRHYSPT----SPAQFQSP 1663
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD-YSP----------------S 291
TSP+YSPTSPSYSP SP++ +SP+YSP+SP S SPD YSP S
Sbjct: 1664 TSPSYSPTSPSYSPASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTFQRSPGQQMSPTS 1723
Query: 290 AGYSPTLPGYSPSSTGQYTPHEGDK 216
GYSPT P +SP + G+ GD+
Sbjct: 1724 PGYSPTSPSFSPRTPGRAAGSGGDQ 1748
Score = 108 bits (270), Expect = 3e-22
Identities = 74/151 (49%), Positives = 88/151 (58%), Gaps = 33/151 (21%)
Frame = -3
Query: 584 PTSP-GYSPTSP---SYSPTSPS--YGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPY- 426
PTSP SPTSP YSPTSP+ Y PTSP + +++ S +SPS+ SP SP
Sbjct: 1566 PTSPFTTSPTSPFSYGYSPTSPAAGYSPTSPLIDA-GGRFASSPQFSPSSPSFSPTSPML 1624
Query: 425 ---SPTSPNYSPTSPSY--------------------SPTSPSYSPSSPTYSPSSPYSSG 315
SPTSP+YSPTSPSY SPTSPSYSP+SP+YSP+SP
Sbjct: 1625 RPGSPTSPSYSPTSPSYSPASPAATRHYSPTSPAQFQSPTSPSYSPTSPSYSPASPAFQA 1684
Query: 314 ASPDYSP-SAGYSPTLP-GYSPSS-TGQYTP 231
SP YSP S +SPT P YSP+S T Q +P
Sbjct: 1685 TSPSYSPASPNWSPTSPDAYSPTSPTFQRSP 1715
Score = 81.3 bits (199), Expect = 5e-14
Identities = 56/136 (41%), Positives = 74/136 (54%), Gaps = 22/136 (16%)
Frame = -3
Query: 572 GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT-------- 417
GY +S + TSP PTSP ++ +S YSP+ SPA+ YSPT
Sbjct: 1550 GYGSSSVNPYATSPGR-PTSPFTTSPTSPFS--YGYSPT----SPAAGYSPTSPLIDAGG 1602
Query: 416 ----SPNYSPTSPSY----------SPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYS 279
SP +SP+SPS+ SPTSPSYSP+SP+YSP+SP ++ SP+ S
Sbjct: 1603 RFASSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAATRHYSPTSPAQFQS 1662
Query: 278 PTLPGYSPSSTGQYTP 231
PT P YSP+S Y+P
Sbjct: 1663 PTSPSYSPTSP-SYSP 1677
[176][TOP]
>UniRef100_UPI000023F34A hypothetical protein FG00916.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023F34A
Length = 1758
Score = 125 bits (315), Expect = 2e-27
Identities = 78/144 (54%), Positives = 89/144 (61%), Gaps = 25/144 (17%)
Frame = -3
Query: 587 SPTSP-GYSPTSPS--YSPTSP--------SYGPTSPSYNPQSAKYSPSIAYSPSNARLS 441
SPTSP YSPTSP+ YSPTSP YGPTSPS++P S +SP+ SP S
Sbjct: 1571 SPTSPFSYSPTSPNMGYSPTSPLIDGGGMGRYGPTSPSFSPSSPSFSPT---SPMLRPTS 1627
Query: 440 PASP-YSPTSPNYSPTSPSY-------------SPTSPSYSPSSPTYSPSSPYSSGASPD 303
PASP YSPTSP+YSPTSPS SPTSPSYSP+SP YSP+SP GA
Sbjct: 1628 PASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSPTSPSYSPASPNYSPTSPNVHGAGGP 1687
Query: 302 YSPSAGYSPTLPGYSPSSTGQYTP 231
SPS YSP P +SP+S Y+P
Sbjct: 1688 TSPS--YSPASPSWSPTSPEAYSP 1709
Score = 124 bits (311), Expect = 6e-27
Identities = 78/160 (48%), Positives = 95/160 (59%), Gaps = 23/160 (14%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPT---SPSYNPQSAKYSPSIAYSPSNAR-LSPASP-- 429
Y PTSP +SP+SPS+SPTSP PT SPSY+P S YSP+ SPS+ R SP SP
Sbjct: 1602 YGPTSPSFSPSSPSFSPTSPMLRPTSPASPSYSPTSPSYSPT---SPSSPRHYSPTSPAQ 1658
Query: 428 --------YSPTSPNYSPTSPSY----SPTSPSYSPSSPTYSPSSPYS-SGASPDY--SP 294
YSP SPNYSPTSP+ PTSPSYSP+SP++SP+SP + S SP + SP
Sbjct: 1659 FNSPTSPSYSPASPNYSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAYSPTSPTFQRSP 1718
Query: 293 SAGYSPTLPGYSPSST--GQYTPHEGDKKDKTGKKDASKD 180
+ SPT P YSP+S TP G ++ S D
Sbjct: 1719 TTQQSPTSPSYSPTSPAFSPRTPGPGTSGNQYSPNSPSND 1758
Score = 89.7 bits (221), Expect = 2e-16
Identities = 59/132 (44%), Positives = 75/132 (56%), Gaps = 13/132 (9%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSP-SYGPTSPSYNPQSAKYSPSIAYSPSN--------ARLSPA 435
SP + G + S SPTSP SY PTSP+ + YSP++ R P
Sbjct: 1557 SPYNRGAASPFSSTSPTSPFSYSPTSPN-----------MGYSPTSPLIDGGGMGRYGPT 1605
Query: 434 SP-YSPTSPNYSPTSPSY---SPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLP 267
SP +SP+SP++SPTSP SP SPSYSP+SP+YSP+SP S SP+ SPT P
Sbjct: 1606 SPSFSPSSPSFSPTSPMLRPTSPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSPTSP 1665
Query: 266 GYSPSSTGQYTP 231
YSP+S Y+P
Sbjct: 1666 SYSPASP-NYSP 1676
[177][TOP]
>UniRef100_C5FCL2 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FCL2_NANOT
Length = 1748
Score = 125 bits (315), Expect = 2e-27
Identities = 68/122 (55%), Positives = 83/122 (68%), Gaps = 6/122 (4%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA----SPYS 423
SPTSP YSPTSP +SPTSPSY PTSPS++P S +SP S +YSP++ L SP S
Sbjct: 1632 SPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPVFSPTSPSYSPTSPALGGTGRHLSPTS 1691
Query: 422 PTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSST 246
PTSP Y+PTSP +SPTSP +YSP+SP +S S SP S GYSPT P ++P+S
Sbjct: 1692 PTSPKYTPTSPGWSPTSPEAYSPTSPNFS-----GSPTSPGGPTSPGYSPTSPTFNPTSP 1746
Query: 245 GQ 240
Q
Sbjct: 1747 RQ 1748
Score = 125 bits (313), Expect = 3e-27
Identities = 70/151 (46%), Positives = 90/151 (59%), Gaps = 31/151 (20%)
Frame = -3
Query: 590 YSPTSP-GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP----- 429
YSP+SP SPTSP+YSP+S Y PTSP + S ++ S A+SP++ +P SP
Sbjct: 1565 YSPSSPFNTSPTSPAYSPSS-GYSPTSPGMSITSPRFISSPAFSPASPSFAPTSPAYSPT 1623
Query: 428 -------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-------- 294
SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP
Sbjct: 1624 SPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPVFSPTSPSYSPTSPALGGT 1683
Query: 293 ----------SAGYSPTLPGYSPSSTGQYTP 231
S Y+PT PG+SP+S Y+P
Sbjct: 1684 GRHLSPTSPTSPKYTPTSPGWSPTSPEAYSP 1714
Score = 93.6 bits (231), Expect = 1e-17
Identities = 50/109 (45%), Positives = 60/109 (55%), Gaps = 35/109 (32%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-------------------- 471
YSPTSPG+SPTSPSYSPTSPS+ P SP ++P S YSP+
Sbjct: 1638 YSPTSPGFSPTSPSYSPTSPSFSPASPVFSPTSPSYSPTSPALGGTGRHLSPTSPTSPKY 1697
Query: 470 -------------AYSPSNARLS--PASPYSPTSPNYSPTSPSYSPTSP 369
AYSP++ S P SP PTSP YSPTSP+++PTSP
Sbjct: 1698 TPTSPGWSPTSPEAYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFNPTSP 1746
Score = 82.8 bits (203), Expect = 2e-14
Identities = 56/122 (45%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS--YGPTSP-SYNPQSAKYSPSIAYSPSNARLSPASPYSP 420
Y P P Y SP + P SP Y P+SP + +P S YSPS YSP++ +S SP
Sbjct: 1545 YQP--PSYGGFSP-HEPRSPGGGYSPSSPFNTSPTSPAYSPSSGYSPTSPGMSITSPRFI 1601
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP----YSSGASPDYSP-SAGYSPTLPGYSP 255
+SP +SP SPS++ P+SP YSP+SP S SP YSP S G+SPT P YSP
Sbjct: 1602 SSPAFSPASPSFA-------PTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSP 1654
Query: 254 SS 249
+S
Sbjct: 1655 TS 1656
Score = 67.0 bits (162), Expect = 1e-09
Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Frame = -3
Query: 491 AKYSPSI--AYSPSNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 321
A Y P +SP R SP YSP+SP N SPTSP+YSP+S YSP+SP S +SP
Sbjct: 1543 ADYQPPSYGGFSPHEPR-SPGGGYSPSSPFNTSPTSPAYSPSS-GYSPTSPGMSITSPRF 1600
Query: 320 SGASPDYSP-SAGYSPTLPGYSPSSTG 243
+SP +SP S ++PT P YSP+S G
Sbjct: 1601 I-SSPAFSPASPSFAPTSPAYSPTSPG 1626
[178][TOP]
>UniRef100_Q54LJ4 Type A von Willebrand factor domain-containing protein n=1
Tax=Dictyostelium discoideum RepID=Q54LJ4_DICDI
Length = 2563
Score = 125 bits (314), Expect = 2e-27
Identities = 62/102 (60%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSPTS 414
YSPTSP Y PTSPSYSPTSPSY PTSPSY+P S YSP S +YS S S + YSP S
Sbjct: 1846 YSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVS 1905
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA 288
P+Y+PTS Y+PT PSYSP SP+Y+P+ P YSPS+
Sbjct: 1906 PSYTPTSLLYAPTIPSYSPVSPSYAPTKPSKLPVLTSYSPSS 1947
Score = 123 bits (309), Expect = 9e-27
Identities = 68/132 (51%), Positives = 85/132 (64%), Gaps = 13/132 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTS 414
Y PTSP YSPTSPSYSPTSPSY PTSPSY+P S YS S Y+ ++ SP SP Y+PTS
Sbjct: 1853 YIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSPSYTPTS 1912
Query: 413 PNYSPTSPSYSPTSPSYSPSSP-------TYSPSSP-YSSGASPDYSPSAGYS----PTL 270
Y+PT PSYSP SPSY+P+ P +YSPSSP +S + + S + + P +
Sbjct: 1913 LLYAPTIPSYSPVSPSYAPTKPSKLPVLTSYSPSSPSFSKSKAKEESTLSEINLPSKPMV 1972
Query: 269 PGYSPSSTGQYT 234
GYS ST ++
Sbjct: 1973 AGYSRMSTVSFS 1984
Score = 114 bits (284), Expect = 8e-24
Identities = 63/111 (56%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSP 399
S YSPTSP Y PTSPSY PTSPSY+P S YSP+ SPS SP SP TSP Y+
Sbjct: 1843 SQPYSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPT---SPS---YSPTSPSYSTSPLYAS 1896
Query: 398 TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSS 249
TS SYSP SPSY+P+S Y+P+ P S SP Y+P+ P L YSPSS
Sbjct: 1897 TSQSYSPVSPSYTPTSLLYAPTIPSYSPVSPSYAPTKPSKLPVLTSYSPSS 1947
Score = 98.6 bits (244), Expect = 3e-19
Identities = 63/124 (50%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Frame = -3
Query: 581 TSPGYSPTSPS-YSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNY 405
TS G PS + S Y PTSP Y P S YSP+ SPS YSPTSP+Y
Sbjct: 1827 TSLGRGAPPPSLFFQASQPYSPTSPFYIPTSPSYSPT---SPS---------YSPTSPSY 1874
Query: 404 SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTPH 228
SPTSPSYSPTSPSYS +SP Y+ +S S SP Y+P S Y+PT+P YSP S Y P
Sbjct: 1875 SPTSPSYSPTSPSYS-TSPLYASTSQSYSPVSPSYTPTSLLYAPTIPSYSPVSP-SYAPT 1932
Query: 227 EGDK 216
+ K
Sbjct: 1933 KPSK 1936
Score = 92.4 bits (228), Expect = 2e-17
Identities = 50/98 (51%), Positives = 56/98 (57%)
Frame = -3
Query: 524 GPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPT 345
G P P S P + + PYSPTSP Y PTSPSYSPTSPSYSP+SP+
Sbjct: 1814 GAPPPPQPPPPPSTSLGRGAPPPSLFFQASQPYSPTSPFYIPTSPSYSPTSPSYSPTSPS 1873
Query: 344 YSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 231
YSP+SP S SP YS S Y+ T YSP S YTP
Sbjct: 1874 YSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSP-SYTP 1910
Score = 85.5 bits (210), Expect = 3e-15
Identities = 61/154 (39%), Positives = 76/154 (49%), Gaps = 34/154 (22%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYN-------------PQSAKYSP-SIAYSPSN 453
YSPTSP YSPTSPSYSPTSPSY PTSPSY+ P S Y+P S+ Y+P+
Sbjct: 1860 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSPSYTPTSLLYAPTI 1919
Query: 452 ARLSPASP---------------YSPTSPNYSPTSPSYSPT-SPSYSPSSPT---YSPSS 330
SP SP YSP+SP++S + T S PS P YS S
Sbjct: 1920 PSYSPVSPSYAPTKPSKLPVLTSYSPSSPSFSKSKAKEESTLSEINLPSKPMVAGYSRMS 1979
Query: 329 PYSSGASPDYSPSAGYSPTLPGYSPS-STGQYTP 231
S ++P +P+ P PS ST ++P
Sbjct: 1980 TVSFSSTPTPTPTPTPPPLPNAPRPSVSTNVFSP 2013
[179][TOP]
>UniRef100_C6HNU4 DNA-directed RNA polymerase II n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HNU4_AJECH
Length = 668
Score = 125 bits (313), Expect = 3e-27
Identities = 68/123 (55%), Positives = 83/123 (67%), Gaps = 7/123 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA-----SPY 426
SPTSP YSPTSP +SPTSPSY PTSPS++P S +SP S +YSP++ L + SP
Sbjct: 551 SPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPT 610
Query: 425 SPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
SPTSP Y+PTSP +SPTSP +YSP+SP +S S SP S GYSPT P ++P S
Sbjct: 611 SPTSPKYTPTSPGWSPTSPETYSPTSPNFS-----GSPTSPGGPTSPGYSPTSPTFNPIS 665
Query: 248 TGQ 240
Q
Sbjct: 666 PRQ 668
Score = 123 bits (308), Expect = 1e-26
Identities = 69/150 (46%), Positives = 88/150 (58%), Gaps = 30/150 (20%)
Frame = -3
Query: 590 YSPTSP-GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP----- 429
YSP+SP SPTSP YSP+S Y PTSP + S ++ S +SP++ +P SP
Sbjct: 486 YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPT 544
Query: 428 -----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP---------- 294
SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP
Sbjct: 545 SPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTG 604
Query: 293 ---------SAGYSPTLPGYSPSSTGQYTP 231
S Y+PT PG+SP+S Y+P
Sbjct: 605 RHLSPTSPTSPKYTPTSPGWSPTSPETYSP 634
Score = 97.1 bits (240), Expect = 1e-18
Identities = 56/120 (46%), Positives = 76/120 (63%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPT--SPGYSPTSPSYSPTSPS--YGPTSP-SYNPQSAKYSPSIAYSPSNARLSPASPY 426
Y P+ S G+SP + SP Y P+SP + +P S +YSPS YSP++ +S SP
Sbjct: 465 YQPSGFSGGFSP----HGARSPGGGYSPSSPFNTSPTSPRYSPSSGYSPTSPGMSITSPR 520
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
+SP +SP SP+++PTSP+YSP+SP+Y S SP YSP S G+SPT P YSP+S
Sbjct: 521 FMSSPGFSPASPAFAPTSPAYSPTSPSYQQSP-----TSPSYSPTSPGFSPTSPSYSPTS 575
Score = 94.7 bits (234), Expect = 5e-18
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 4/92 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP--YSPT 417
+SP SP +SPTSPSYSPTSP+ G ++ + ++ SP Y+P++ SP SP YSPT
Sbjct: 578 FSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPK--YTPTSPGWSPTSPETYSPT 635
Query: 416 SPNY--SPTSPSYSPTSPSYSPSSPTYSPSSP 327
SPN+ SPTSP PTSP YSP+SPT++P SP
Sbjct: 636 SPNFSGSPTSPG-GPTSPGYSPTSPTFNPISP 666
Score = 67.0 bits (162), Expect = 1e-09
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 5/85 (5%)
Frame = -3
Query: 488 KYSPSI---AYSPSNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 321
+Y PS +SP AR SP YSP+SP N SPTSP YSP+S YSP+SP S +SP
Sbjct: 464 EYQPSGFSGGFSPHGAR-SPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRF 521
Query: 320 SGASPDYSP-SAGYSPTLPGYSPSS 249
+SP +SP S ++PT P YSP+S
Sbjct: 522 M-SSPGFSPASPAFAPTSPAYSPTS 545
[180][TOP]
>UniRef100_C0NEY2 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0NEY2_AJECG
Length = 1234
Score = 125 bits (313), Expect = 3e-27
Identities = 68/123 (55%), Positives = 83/123 (67%), Gaps = 7/123 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA-----SPY 426
SPTSP YSPTSP +SPTSPSY PTSPS++P S +SP S +YSP++ L + SP
Sbjct: 1117 SPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPT 1176
Query: 425 SPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
SPTSP Y+PTSP +SPTSP +YSP+SP +S S SP S GYSPT P ++P S
Sbjct: 1177 SPTSPKYTPTSPGWSPTSPETYSPTSPNFS-----GSPTSPGGPTSPGYSPTSPTFNPIS 1231
Query: 248 TGQ 240
Q
Sbjct: 1232 PRQ 1234
Score = 123 bits (308), Expect = 1e-26
Identities = 69/150 (46%), Positives = 88/150 (58%), Gaps = 30/150 (20%)
Frame = -3
Query: 590 YSPTSP-GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP----- 429
YSP+SP SPTSP YSP+S Y PTSP + S ++ S +SP++ +P SP
Sbjct: 1052 YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPT 1110
Query: 428 -----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP---------- 294
SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP
Sbjct: 1111 SPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTG 1170
Query: 293 ---------SAGYSPTLPGYSPSSTGQYTP 231
S Y+PT PG+SP+S Y+P
Sbjct: 1171 RHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1200
Score = 97.1 bits (240), Expect = 1e-18
Identities = 56/120 (46%), Positives = 76/120 (63%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPT--SPGYSPTSPSYSPTSPS--YGPTSP-SYNPQSAKYSPSIAYSPSNARLSPASPY 426
Y P+ S G+SP + SP Y P+SP + +P S +YSPS YSP++ +S SP
Sbjct: 1031 YQPSGFSGGFSP----HGARSPGGGYSPSSPFNTSPTSPRYSPSSGYSPTSPGMSITSPR 1086
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
+SP +SP SP+++PTSP+YSP+SP+Y S SP YSP S G+SPT P YSP+S
Sbjct: 1087 FMSSPGFSPASPAFAPTSPAYSPTSPSYQQSP-----TSPSYSPTSPGFSPTSPSYSPTS 1141
Score = 94.7 bits (234), Expect = 5e-18
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 4/92 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP--YSPT 417
+SP SP +SPTSPSYSPTSP+ G ++ + ++ SP Y+P++ SP SP YSPT
Sbjct: 1144 FSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPK--YTPTSPGWSPTSPETYSPT 1201
Query: 416 SPNY--SPTSPSYSPTSPSYSPSSPTYSPSSP 327
SPN+ SPTSP PTSP YSP+SPT++P SP
Sbjct: 1202 SPNFSGSPTSPG-GPTSPGYSPTSPTFNPISP 1232
Score = 67.0 bits (162), Expect = 1e-09
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 5/85 (5%)
Frame = -3
Query: 488 KYSPSI---AYSPSNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 321
+Y PS +SP AR SP YSP+SP N SPTSP YSP+S YSP+SP S +SP
Sbjct: 1030 EYQPSGFSGGFSPHGAR-SPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRF 1087
Query: 320 SGASPDYSP-SAGYSPTLPGYSPSS 249
+SP +SP S ++PT P YSP+S
Sbjct: 1088 M-SSPGFSPASPAFAPTSPAYSPTS 1111
[181][TOP]
>UniRef100_A6QYA7 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6QYA7_AJECN
Length = 1747
Score = 125 bits (313), Expect = 3e-27
Identities = 68/123 (55%), Positives = 83/123 (67%), Gaps = 7/123 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA-----SPY 426
SPTSP YSPTSP +SPTSPSY PTSPS++P S +SP S +YSP++ L + SP
Sbjct: 1630 SPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPT 1689
Query: 425 SPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
SPTSP Y+PTSP +SPTSP +YSP+SP +S S SP S GYSPT P ++P S
Sbjct: 1690 SPTSPKYTPTSPGWSPTSPETYSPTSPNFS-----GSPTSPGGPTSPGYSPTSPTFNPIS 1744
Query: 248 TGQ 240
Q
Sbjct: 1745 PRQ 1747
Score = 123 bits (308), Expect = 1e-26
Identities = 69/150 (46%), Positives = 88/150 (58%), Gaps = 30/150 (20%)
Frame = -3
Query: 590 YSPTSP-GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP----- 429
YSP+SP SPTSP YSP+S Y PTSP + S ++ S +SP++ +P SP
Sbjct: 1565 YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPT 1623
Query: 428 -----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP---------- 294
SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP YSP
Sbjct: 1624 SPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTG 1683
Query: 293 ---------SAGYSPTLPGYSPSSTGQYTP 231
S Y+PT PG+SP+S Y+P
Sbjct: 1684 RHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1713
Score = 97.1 bits (240), Expect = 1e-18
Identities = 56/120 (46%), Positives = 76/120 (63%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPT--SPGYSPTSPSYSPTSPS--YGPTSP-SYNPQSAKYSPSIAYSPSNARLSPASPY 426
Y P+ S G+SP + SP Y P+SP + +P S +YSPS YSP++ +S SP
Sbjct: 1544 YQPSGFSGGFSP----HGARSPGGGYSPSSPFNTSPTSPRYSPSSGYSPTSPGMSITSPR 1599
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
+SP +SP SP+++PTSP+YSP+SP+Y S SP YSP S G+SPT P YSP+S
Sbjct: 1600 FMSSPGFSPASPAFAPTSPAYSPTSPSYQQSP-----TSPSYSPTSPGFSPTSPSYSPTS 1654
Score = 94.7 bits (234), Expect = 5e-18
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 4/92 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP--YSPT 417
+SP SP +SPTSPSYSPTSP+ G ++ + ++ SP Y+P++ SP SP YSPT
Sbjct: 1657 FSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPK--YTPTSPGWSPTSPETYSPT 1714
Query: 416 SPNY--SPTSPSYSPTSPSYSPSSPTYSPSSP 327
SPN+ SPTSP PTSP YSP+SPT++P SP
Sbjct: 1715 SPNFSGSPTSPG-GPTSPGYSPTSPTFNPISP 1745
Score = 67.0 bits (162), Expect = 1e-09
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 5/85 (5%)
Frame = -3
Query: 488 KYSPSI---AYSPSNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 321
+Y PS +SP AR SP YSP+SP N SPTSP YSP+S YSP+SP S +SP
Sbjct: 1543 EYQPSGFSGGFSPHGAR-SPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRF 1600
Query: 320 SGASPDYSP-SAGYSPTLPGYSPSS 249
+SP +SP S ++PT P YSP+S
Sbjct: 1601 M-SSPGFSPASPAFAPTSPAYSPTS 1624
[182][TOP]
>UniRef100_Q0D054 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0D054_ASPTN
Length = 1742
Score = 123 bits (309), Expect = 9e-27
Identities = 70/125 (56%), Positives = 84/125 (67%), Gaps = 8/125 (6%)
Frame = -3
Query: 590 YSPTSPGY---SPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYS 423
YSPTSP Y SPTSPSYSPTSP + PTSP+Y+P S SP S +SP++ SP SP
Sbjct: 1620 YSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPNLSPASPVFSPTSPSYSPTSPAL 1679
Query: 422 PTSPNYSPTSPS---YSPTSPSYSPSSP-TYSPSSPYSSGASPDYSPSAGYSPTLPGYSP 255
N SPTSP+ Y+PTSP +SP+SP +YSP+SP + G SP SP YSPT P YSP
Sbjct: 1680 GAGRNMSPTSPTSPKYTPTSPGWSPTSPQSYSPTSP-NIGGSPT-SPGGAYSPTSPTYSP 1737
Query: 254 SSTGQ 240
+S Q
Sbjct: 1738 TSPRQ 1742
Score = 120 bits (301), Expect = 8e-26
Identities = 67/142 (47%), Positives = 82/142 (57%), Gaps = 22/142 (15%)
Frame = -3
Query: 590 YSPTSPGY---SP--TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPY 426
YSPTSPG SP TSP +SP SP++GPTSP+Y+P S Y +
Sbjct: 1587 YSPTSPGMGITSPRMTSPGFSPASPAFGPTSPAYSPTSPAYGQA---------------- 1630
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP---------------- 294
SPTSP+YSPTSP +SPTSP+YSP+SP SP+SP S SP YSP
Sbjct: 1631 SPTSPSYSPTSPGFSPTSPNYSPTSPNLSPASPVFSPTSPSYSPTSPALGAGRNMSPTSP 1690
Query: 293 -SAGYSPTLPGYSPSSTGQYTP 231
S Y+PT PG+SP+S Y+P
Sbjct: 1691 TSPKYTPTSPGWSPTSPQSYSP 1712
Score = 108 bits (269), Expect = 4e-22
Identities = 70/127 (55%), Positives = 82/127 (64%), Gaps = 14/127 (11%)
Frame = -3
Query: 587 SPTSP-GYSP--------TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPA 435
+PTSP GYSP TSPSYSP+S SY PTSP S + + SP SPA
Sbjct: 1559 APTSPLGYSPGSPFSGGATSPSYSPSS-SYSPTSPGMGITSPRMT-----SPG---FSPA 1609
Query: 434 SP-YSPTSPNYSPTSPSY---SPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 270
SP + PTSP YSPTSP+Y SPTSPSYSP+SP +SP+SP S SP+ SP S +SPT
Sbjct: 1610 SPAFGPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPNLSPASPVFSPTS 1669
Query: 269 PGYSPSS 249
P YSP+S
Sbjct: 1670 PSYSPTS 1676
[183][TOP]
>UniRef100_B6QAY2 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224
RepID=B6QAY2_PENMQ
Length = 1744
Score = 122 bits (307), Expect = 2e-26
Identities = 63/124 (50%), Positives = 83/124 (66%), Gaps = 4/124 (3%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
YSP+SP S TSP + TSP + P SP++ S YSP S ++ ++ SP SP +SP+
Sbjct: 1586 YSPSSPNMSVTSPRFMSTSPGFSPQSPAFAITSPAYSPTSPSFQATSPSYSPTSPRFSPS 1645
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSPSAGYSPTLPGYSPSSTG 243
SPNYSP+SP++SP SP++SPSSPTYSP+SP G SP S YSP PG+SP+S
Sbjct: 1646 SPNYSPSSPNFSPASPAFSPSSPTYSPTSPAIGGRQFSPSSPSSPKYSPASPGWSPTSPE 1705
Query: 242 QYTP 231
Y+P
Sbjct: 1706 IYSP 1709
Score = 120 bits (301), Expect = 8e-26
Identities = 72/127 (56%), Positives = 87/127 (68%), Gaps = 8/127 (6%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
SP SPGYSP+S SYSP+SP+ TSP + S +SP SP+ A SPA YSPTSP+
Sbjct: 1574 SPVSPGYSPSS-SYSPSSPNMSVTSPRFMSTSPGFSPQ---SPAFAITSPA--YSPTSPS 1627
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPG-----YSPS-- 252
+ TSPSYSPTSP +SPSSP YSPSSP S ASP +SPS+ YSPT P +SPS
Sbjct: 1628 FQATSPSYSPTSPRFSPSSPNYSPSSPNFSPASPAFSPSSPTYSPTSPAIGGRQFSPSSP 1687
Query: 251 STGQYTP 231
S+ +Y+P
Sbjct: 1688 SSPKYSP 1694
Score = 120 bits (301), Expect = 8e-26
Identities = 70/138 (50%), Positives = 89/138 (64%), Gaps = 21/138 (15%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
+SP SP ++ TSP+YSPTSPS+ TSPSY+P S ++SPS YSPS+ SPASP +SP+
Sbjct: 1607 FSPQSPAFAITSPAYSPTSPSFQATSPSYSPTSPRFSPSSPNYSPSSPNFSPASPAFSPS 1666
Query: 416 SPNYSPTSPS---------------YSPTSPSYSPSSP-TYSPSSP--YSSGASPDY-SP 294
SP YSPTSP+ YSP SP +SP+SP YSP+SP + S SP +
Sbjct: 1667 SPTYSPTSPAIGGRQFSPSSPSSPKYSPASPGWSPTSPEIYSPTSPNIHGSPTSPARGAT 1726
Query: 293 SAGYSPTLPGYSPSSTGQ 240
S YSPT P Y+P+S Q
Sbjct: 1727 SPSYSPTSPQYNPTSPRQ 1744
Score = 87.8 bits (216), Expect = 6e-16
Identities = 58/146 (39%), Positives = 76/146 (52%), Gaps = 32/146 (21%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQS-AKYSPSIAY--SPSNARLSPASPYSP 420
+SP + T ++ PS G S PQS YSP+ + SP + SP+S YSP
Sbjct: 1529 FSPIRQAGAETPGGFTAYQPSGGLGGFSPAPQSPGGYSPTSPFNTSPVSPGYSPSSSYSP 1588
Query: 419 TSPN----------------------------YSPTSPSYSPTSPSYSPSSPTYSPSSPY 324
+SPN YSPTSPS+ TSPSYSP+SP +SPSSP
Sbjct: 1589 SSPNMSVTSPRFMSTSPGFSPQSPAFAITSPAYSPTSPSFQATSPSYSPTSPRFSPSSPN 1648
Query: 323 SSGASPDYSP-SAGYSPTLPGYSPSS 249
S +SP++SP S +SP+ P YSP+S
Sbjct: 1649 YSPSSPNFSPASPAFSPSSPTYSPTS 1674
[184][TOP]
>UniRef100_Q2HDK0 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2HDK0_CHAGB
Length = 1756
Score = 121 bits (303), Expect = 5e-26
Identities = 74/146 (50%), Positives = 92/146 (63%), Gaps = 13/146 (8%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY---SPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSP 420
+SP+SP +SPTSP SPTSP+Y PTSPSY+P S + + YSP+ SP SP
Sbjct: 1608 FSPSSPSFSPTSPMLRPGSPTSPNYSPTSPSYSPASP--AATRHYSPT----SPQQFNSP 1661
Query: 419 TSPNYSPTSPSYSP-------TSPSYSPSSPTYSPSSPYS-SGASPDY--SPSAGYSPTL 270
TSP+YSPTSPSYSP TSPSYSP+SPT+SP+SP + S SP + SP SPT
Sbjct: 1662 TSPSYSPTSPSYSPASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSFHRSPGQQMSPTS 1721
Query: 269 PGYSPSSTGQYTPHEGDKKDKTGKKD 192
PGYSP+S ++P + G D
Sbjct: 1722 PGYSPTSP-SFSPRTPGRGPSGGSGD 1746
Score = 114 bits (286), Expect = 4e-24
Identities = 70/128 (54%), Positives = 81/128 (63%), Gaps = 21/128 (16%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPS----YGPTSPSY--NPQSAKYSP-SIAYSPSNARLSPASP 429
SPTSP YSPTSPSYSP SP+ Y PTSP +P S YSP S +YSP++ L SP
Sbjct: 1626 SPTSPNYSPTSPSYSPASPAATRHYSPTSPQQFNSPTSPSYSPTSPSYSPASPNLHATSP 1685
Query: 428 -YSPTSPNYSPTSP-SYSPTSPSY--------SPSSPTYSPSSPYSSGASPDYSPSAG-- 285
YSP SP +SPTSP +YSPTSPS+ SP+SP YSP+SP S +P PS G
Sbjct: 1686 SYSPASPTWSPTSPDAYSPTSPSFHRSPGQQMSPTSPGYSPTSPSFSPRTPGRGPSGGSG 1745
Query: 284 --YSPTLP 267
YSPT P
Sbjct: 1746 DQYSPTSP 1753
Score = 108 bits (270), Expect = 3e-22
Identities = 69/142 (48%), Positives = 85/142 (59%), Gaps = 25/142 (17%)
Frame = -3
Query: 581 TSP-GYSPTSP-----SYSPTSPS-YGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPY- 426
TSP SPTSP YSPTSP+ Y PTSP + +Y+ S +SPS+ SP SP
Sbjct: 1564 TSPFSTSPTSPFSYGGGYSPTSPAGYSPTSPLLDA-GGRYASSPQFSPSSPSFSPTSPML 1622
Query: 425 ---SPTSPNYSPTSPSYSPTSPS-------------YSPSSPTYSPSSPYSSGASPD-YS 297
SPTSPNYSPTSPSYSP SP+ SP+SP+YSP+SP S ASP+ ++
Sbjct: 1623 RPGSPTSPNYSPTSPSYSPASPAATRHYSPTSPQQFNSPTSPSYSPTSPSYSPASPNLHA 1682
Query: 296 PSAGYSPTLPGYSPSSTGQYTP 231
S YSP P +SP+S Y+P
Sbjct: 1683 TSPSYSPASPTWSPTSPDAYSP 1704
Score = 89.4 bits (220), Expect = 2e-16
Identities = 58/126 (46%), Positives = 74/126 (58%), Gaps = 9/126 (7%)
Frame = -3
Query: 581 TSPGYSPTSP-SYSPTSP-----SYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSP 420
TSP TSP S SPTSP Y PTSP A YSP+ + R + + +SP
Sbjct: 1559 TSP--RATSPFSTSPTSPFSYGGGYSPTSP------AGYSPTSPLLDAGGRYASSPQFSP 1610
Query: 419 TSPNYSPTSPSY---SPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
+SP++SPTSP SPTSP+YSP+SP+YSP+SP ++ SP SPT P YSP+S
Sbjct: 1611 SSPSFSPTSPMLRPGSPTSPNYSPTSPSYSPASPAATRHYSPTSPQQFNSPTSPSYSPTS 1670
Query: 248 TGQYTP 231
Y+P
Sbjct: 1671 P-SYSP 1675
[185][TOP]
>UniRef100_C7YI77 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YI77_NECH7
Length = 1750
Score = 121 bits (303), Expect = 5e-26
Identities = 73/147 (49%), Positives = 87/147 (59%), Gaps = 29/147 (19%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSPSYGPTSPS---YNPQSAKYSPSIAYSPSN-ARLSPASPYSPTS 414
TSP +SP+SPS+SPTSP PTSP+ Y+P S YSP+ SP + + SPA SPTS
Sbjct: 1599 TSPSFSPSSPSFSPTSPMVRPTSPASPNYSPSSPNYSPASPSSPRHYSPTSPAQFNSPTS 1658
Query: 413 PNYSPTSPSYSP----------TSPSYSPSSPT--------YSPSSPYSSGASPDYSP-S 291
PNYSP SP+YSP TSPSYSP+SPT YSP+SPY SP S
Sbjct: 1659 PNYSPASPNYSPASPNLHAGGTTSPSYSPASPTWSPTSPEAYSPTSPYQRSPGAQQSPTS 1718
Query: 290 AGYSPTLPGYSP------SSTGQYTPH 228
YSPT P +SP SS QY+P+
Sbjct: 1719 PSYSPTSPAFSPRTPGPGSSGNQYSPN 1745
Score = 119 bits (297), Expect = 2e-25
Identities = 72/144 (50%), Positives = 86/144 (59%), Gaps = 30/144 (20%)
Frame = -3
Query: 590 YSPTSP-------GYSPTSPSYSPTSPSYGPT----------SPSYNPQSAKYSPSIAYS 462
YSPTSP G TSPS+SP+SPS+ PT SP+Y+P S YSP+ S
Sbjct: 1582 YSPTSPLVDGGMGGRYATSPSFSPSSPSFSPTSPMVRPTSPASPNYSPSSPNYSPASPSS 1641
Query: 461 PSN-ARLSPASPYSPTSPNYSPTSPSYSP----------TSPSYSPSSPTYSPSSP--YS 321
P + + SPA SPTSPNYSP SP+YSP TSPSYSP+SPT+SP+SP YS
Sbjct: 1642 PRHYSPTSPAQFNSPTSPNYSPASPNYSPASPNLHAGGTTSPSYSPASPTWSPTSPEAYS 1701
Query: 320 SGASPDYSPSAGYSPTLPGYSPSS 249
+ SP A SPT P YSP+S
Sbjct: 1702 PTSPYQRSPGAQQSPTSPSYSPTS 1725
Score = 106 bits (264), Expect = 2e-21
Identities = 69/146 (47%), Positives = 83/146 (56%), Gaps = 27/146 (18%)
Frame = -3
Query: 587 SPTSP-----GYSPTSPS-YSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPY 426
SPTSP GYSPTSP+ YSPTSP +Y+ S ++SPS+ SP SP
Sbjct: 1563 SPTSPFGPGGGYSPTSPNAYSPTSPLVD------GGMGGRYATSPSFSPSSPSFSPTSPM 1616
Query: 425 ----SPTSPNYSPTSPSYSPTSPS----YSPSSPTY--SPSSPYSSGASPDYSP------ 294
SP SPNYSP+SP+YSP SPS YSP+SP SP+SP S ASP+YSP
Sbjct: 1617 VRPTSPASPNYSPSSPNYSPASPSSPRHYSPTSPAQFNSPTSPNYSPASPNYSPASPNLH 1676
Query: 293 -----SAGYSPTLPGYSPSSTGQYTP 231
S YSP P +SP+S Y+P
Sbjct: 1677 AGGTTSPSYSPASPTWSPTSPEAYSP 1702
Score = 99.4 bits (246), Expect = 2e-19
Identities = 61/121 (50%), Positives = 72/121 (59%), Gaps = 33/121 (27%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS----YSPTSPSY--GPTSPSYNPQSAKYSP-----------SIAYS 462
YSP+SP YSP SPS YSPTSP+ PTSP+Y+P S YSP S +YS
Sbjct: 1627 YSPSSPNYSPASPSSPRHYSPTSPAQFNSPTSPNYSPASPNYSPASPNLHAGGTTSPSYS 1686
Query: 461 PSNARLSPASP--YSPTSP-------NYSPTSPSYSPTSPSYSPSSP-------TYSPSS 330
P++ SP SP YSPTSP SPTSPSYSPTSP++SP +P YSP+S
Sbjct: 1687 PASPTWSPTSPEAYSPTSPYQRSPGAQQSPTSPSYSPTSPAFSPRTPGPGSSGNQYSPNS 1746
Query: 329 P 327
P
Sbjct: 1747 P 1747
Score = 78.2 bits (191), Expect = 5e-13
Identities = 54/140 (38%), Positives = 73/140 (52%), Gaps = 23/140 (16%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
SP + +SP + S T +G T + +A ++ S SP SP+ P
Sbjct: 1515 SPAAGNFSPIQGAGSDTPAGFGNTEYGFGGSTAMSPYAMRGGTSPFTTSPTSPFGPGG-G 1573
Query: 407 YSPTSPS-YSP--------------TSPSYSPSSPTYSPSSPY---SSGASPDYSPSA-G 285
YSPTSP+ YSP TSPS+SPSSP++SP+SP +S ASP+YSPS+
Sbjct: 1574 YSPTSPNAYSPTSPLVDGGMGGRYATSPSFSPSSPSFSPTSPMVRPTSPASPNYSPSSPN 1633
Query: 284 YSPTLPG----YSPSSTGQY 237
YSP P YSP+S Q+
Sbjct: 1634 YSPASPSSPRHYSPTSPAQF 1653
[186][TOP]
>UniRef100_C6F1F0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F0_PLAVI
Length = 218
Score = 120 bits (300), Expect = 1e-25
Identities = 71/132 (53%), Positives = 78/132 (59%), Gaps = 18/132 (13%)
Frame = -3
Query: 590 YSPTSPG-------------YSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNA 450
YSPTSP +S SP YS TSP Y PTSP Y+P S KYSP+ SP
Sbjct: 29 YSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPT---SPK-- 83
Query: 449 RLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-ASPDYSP----SAG 285
YSPTSP YSPTSP YSPTSP YSP+SP YSPSSP + +SP YSP S
Sbjct: 84 -------YSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPK 136
Query: 284 YSPTLPGYSPSS 249
+SPT P YS SS
Sbjct: 137 FSPTSPAYSISS 148
Score = 117 bits (292), Expect = 9e-25
Identities = 61/106 (57%), Positives = 73/106 (68%), Gaps = 6/106 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPY--SP 420
YSPTSP YSPTSP YSPTSP Y PTSP Y+P S KYSP S YSP++ + SP+SP +P
Sbjct: 63 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNP 122
Query: 419 TSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 291
+SP+YSP SP +SPTSP+YS SSP Y S S + SP+
Sbjct: 123 SSPHYSPYAIASPKFSPTSPAYSISSPVYDQSGNARSKSQHPLSPA 168
Score = 99.8 bits (247), Expect = 1e-19
Identities = 64/124 (51%), Positives = 72/124 (58%), Gaps = 17/124 (13%)
Frame = -3
Query: 569 YSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP------------Y 426
YSPTSP+Y T+P+ G S N A YSP+ SP+N +L +P Y
Sbjct: 1 YSPTSPTYHLTNPASGGGSSGLNGTKAYYSPT---SPTN-QLDEVNPNMMKYHSVVSPVY 56
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGASPDYSP-SAGYSPTLPGY 261
S TSP YSPTSP YSPTSP YSP+SP YSP SP SP YSP S YSPT P Y
Sbjct: 57 SVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP----TSPKYSPTSPKYSPTSPQY 112
Query: 260 SPSS 249
SPSS
Sbjct: 113 SPSS 116
[187][TOP]
>UniRef100_C6F0A3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0A3_PLAFA
Length = 195
Score = 119 bits (299), Expect = 1e-25
Identities = 69/125 (55%), Positives = 80/125 (64%), Gaps = 11/125 (8%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSP----SYGPTSPSYNPQSAKYS-PSIAYSPSNARLSPASP- 429
YSPTSP Y+ + YSPTSP + YN S YS S YSP++ + SP SP
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 428 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-ASPDYSP----SAGYSPTLPG 264
YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP + ASP+YSP S +SPT P
Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPA 120
Query: 263 YSPSS 249
YS SS
Sbjct: 121 YSISS 125
Score = 111 bits (278), Expect = 4e-23
Identities = 58/92 (63%), Positives = 65/92 (70%), Gaps = 6/92 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP-- 420
YS TSP YSPTSP YSPTSP Y PTSP Y+P S KYSP S YSP++ + SP SP +
Sbjct: 40 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNI 99
Query: 419 TSPNYSP---TSPSYSPTSPSYSPSSPTYSPS 333
SPNYSP TSP +SPTSP+YS SSP Y S
Sbjct: 100 ASPNYSPYSITSPKFSPTSPAYSISSPVYDKS 131
Score = 107 bits (268), Expect = 5e-22
Identities = 69/155 (44%), Positives = 82/155 (52%), Gaps = 14/155 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
Y+ SP YS TSP YSPTSP Y PTSP Y+P S KYSP+ SP YSPTSP
Sbjct: 33 YNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPT---SPK---------YSPTSP 80
Query: 410 NYSPTSPSYSPT--------SPSYSP---SSPTYSPSSPYSSGASPDYSPSA---GYSPT 273
YSPTSP YSPT SP+YSP +SP +SP+SP S +SP Y S + P
Sbjct: 81 KYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSPVYDKSGVVNAHQPM 140
Query: 272 LPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGN 168
P Y S Q + D + + A D+ N
Sbjct: 141 SPAYILQSPVQIKQNVQDANMFSPIQQAHVDEAKN 175
[188][TOP]
>UniRef100_B3L428 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3L428_PLAKH
Length = 2353
Score = 119 bits (297), Expect = 2e-25
Identities = 73/152 (48%), Positives = 88/152 (57%), Gaps = 11/152 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
+S SP Y+ TSP YSPTSP Y PTSP Y P S KYSP S YSP++ + SP SP YSPT
Sbjct: 2184 HSVLSPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2243
Query: 416 SPNYSPTSP-SYSPTSPSYSP---SSPTYSPSSPYSSGASPDYSPSA-----GYSPTLPG 264
SP YSPTSP SP+SP YSP +SP +SP+SP S +SP Y S+ P P
Sbjct: 2244 SPQYSPTSPVPNSPSSPHYSPYAIASPKFSPTSPAYSISSPVYDQSSNARNRNQHPLSPA 2303
Query: 263 YSPSSTGQYTPHEGDKKDKTGKKDASKDDKGN 168
Y S Q H D + + A+ D+ N
Sbjct: 2304 YILQSPVQVKQHIQDVSVFSPIQQANADEAQN 2335
Score = 110 bits (276), Expect = 6e-23
Identities = 65/132 (49%), Positives = 76/132 (57%), Gaps = 24/132 (18%)
Frame = -3
Query: 578 SPGYSPTSPSY--------------SPTSPSYGPTSPS-----YNPQSAKYSP--SIAYS 462
SP YSPTSP+Y + T Y PTSP NP KY S AY+
Sbjct: 2133 SPSYSPTSPTYHLSSNVNAGGSSGLNDTKAFYSPTSPKNQMDEMNPNMMKYHSVLSPAYA 2192
Query: 461 PSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAG 285
++ + SP SP YSPTSP Y PTSP YSPTSP YSP+SP YSP+SP S SP YSP++
Sbjct: 2193 VTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSP 2252
Query: 284 Y--SPTLPGYSP 255
SP+ P YSP
Sbjct: 2253 VPNSPSSPHYSP 2264
Score = 79.0 bits (193), Expect = 3e-13
Identities = 70/210 (33%), Positives = 84/210 (40%), Gaps = 90/210 (42%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSP----SYGPTSP--------------------SYNPQSAK- 486
+SPT SPTS +SP SP + P P +YN S K
Sbjct: 2041 FSPTQSPRSPTSVIHSPFSPFDNNNQQPLDPGMMLFSPKNNQNNSSSMAMMNYNVFSPKA 2100
Query: 485 -----YSPSIAYSPS-----------------NARLSPASP------------------- 429
+SP++ YSP+ + SP SP
Sbjct: 2101 NLDNIHSPAMLYSPNRPLDIFSPKQQTQNNIYSPSYSPTSPTYHLSSNVNAGGSSGLNDT 2160
Query: 428 ---YSPTSPN--------------------YSPTSPSYSPTSPSYSPSSPTYSPSSPYSS 318
YSPTSP Y+ TSP YSPTSP YSP+SP Y P+SP S
Sbjct: 2161 KAFYSPTSPKNQMDEMNPNMMKYHSVLSPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYS 2220
Query: 317 GASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP YSP S YSPT P YSP+S QY+P
Sbjct: 2221 PTSPKYSPTSPKYSPTSPKYSPTSP-QYSP 2249
[189][TOP]
>UniRef100_B8M2Y2 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500
RepID=B8M2Y2_TALSN
Length = 1755
Score = 118 bits (295), Expect = 4e-25
Identities = 69/136 (50%), Positives = 87/136 (63%), Gaps = 16/136 (11%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPT 417
+SP+SP + TSP+YSPTSPSY SPSY+P S ++SPS YSPS+ +S +SP +SPT
Sbjct: 1606 FSPSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPT 1665
Query: 416 SPNYSPTSPSY-------SPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSP------ 276
SP YSPTSP+ SPTSP YSP+SP +SP+SP + SP+ SP
Sbjct: 1666 SPTYSPTSPAIGGTRQFSSPTSPKYSPASPAWSPTSPEIYSPT---SPNIHGSPTSPARG 1722
Query: 275 -TLPGYSPSSTGQYTP 231
T P YSP+S QY P
Sbjct: 1723 GTSPSYSPTSP-QYNP 1737
Score = 110 bits (276), Expect = 6e-23
Identities = 68/144 (47%), Positives = 81/144 (56%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTSP-GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPT 417
YSPTSP SP SP YSP+S SY P SP + S ++ S +SPS+ SP YSPT
Sbjct: 1565 YSPTSPFNTSPVSPGYSPSS-SYSPASPGMSITSPRFVTSPGFSPSSPNFQTTSPAYSPT 1623
Query: 416 SPNY-------SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP------------ 294
SP+Y SPTSP +SP+SP+YSPSSP S SSP S SP YSP
Sbjct: 1624 SPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFS 1683
Query: 293 ---SAGYSPTLPGYSPSSTGQYTP 231
S YSP P +SP+S Y+P
Sbjct: 1684 SPTSPKYSPASPAWSPTSPEIYSP 1707
Score = 107 bits (267), Expect = 7e-22
Identities = 63/137 (45%), Positives = 84/137 (61%), Gaps = 24/137 (17%)
Frame = -3
Query: 587 SPTSPGYSPTSPSY-------SPTSPS-YGPTSP-SYNPQSAKYSPSIAYSPSNARLSPA 435
S T G++ PS +P SP Y PTSP + +P S YSPS +YSP++ +S
Sbjct: 1537 SETPAGFTSYQPSQGLGGFSPAPQSPGGYSPTSPFNTSPVSPGYSPSSSYSPASPGMSIT 1596
Query: 434 SP-------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA---- 288
SP +SP+SPN+ TSP+YSPTSPSY +SP+YSP+SP S +SP+YSPS+
Sbjct: 1597 SPRFVTSPGFSPSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMS 1656
Query: 287 ----GYSPTLPGYSPSS 249
+SPT P YSP+S
Sbjct: 1657 LSSPAFSPTSPTYSPTS 1673
Score = 82.0 bits (201), Expect = 3e-14
Identities = 48/100 (48%), Positives = 59/100 (59%), Gaps = 9/100 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY-------SPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPAS 432
+SPTSP YSPTSP+ SPTSP Y P SP+++P SP I
Sbjct: 1662 FSPTSPTYSPTSPAIGGTRQFSSPTSPKYSPASPAWSPT----SPEI------------- 1704
Query: 431 PYSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYSS 318
YSPTSPN SPTSP+ TSPSYSP+SP Y+P+ Y++
Sbjct: 1705 -YSPTSPNIHGSPTSPARGGTSPSYSPTSPQYNPTYVYTN 1743
[190][TOP]
>UniRef100_Q5EXZ8 RNA polymerase II largest subunit (Fragment) n=1 Tax=Periplaneta
americana RepID=Q5EXZ8_PERAM
Length = 97
Score = 117 bits (294), Expect = 5e-25
Identities = 59/105 (56%), Positives = 71/105 (67%), Gaps = 8/105 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS--------YSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPA 435
YSPTSP YSP+SP YSP+SPSY PTSP+Y+P S +YSPS +
Sbjct: 1 YSPTSPSYSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPS------------S 48
Query: 434 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 300
S YSPTSP Y+PTSP+YSP+SP+YSP+ P YSP+SP S SP Y
Sbjct: 49 SKYSPTSPTYTPTSPNYSPSSPTYSPAVPGYSPTSPTYSPTSPAY 93
Score = 116 bits (291), Expect = 1e-24
Identities = 58/95 (61%), Positives = 72/95 (75%), Gaps = 2/95 (2%)
Frame = -3
Query: 527 YGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSS 351
Y PTSPSY+P S +++PS ++ R SP+SP YSPTSP YSPTSP YSP+S YSP+S
Sbjct: 1 YSPTSPSYSPSSPQHTPS-----ASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTS 55
Query: 350 PTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSS 249
PTY+P+SP S +SP YSP+ GYSPT P YSP+S
Sbjct: 56 PTYTPTSPNYSPSSPTYSPAVPGYSPTSPTYSPTS 90
Score = 109 bits (273), Expect = 1e-22
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Frame = -3
Query: 548 YSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSP 369
YSPTSPSY P+SP + P S ++ YSP+SP+YSPTSP+YSPTSP
Sbjct: 1 YSPTSPSYSPSSPQHTP------------------SASTRYSPSSPSYSPTSPTYSPTSP 42
Query: 368 SYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 231
YSPSS YSP+SP + SP+YSPS+ YSP +PGYSP+S Y+P
Sbjct: 43 QYSPSSSKYSPTSPTYTPTSPNYSPSSPTYSPAVPGYSPTSP-TYSP 88
Score = 62.8 bits (151), Expect = 2e-08
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSN 453
YSPTSP Y+PTSP+YSP+SP+Y P P Y+P S YSP+ SN
Sbjct: 51 YSPTSPTYTPTSPNYSPSSPTYSPAVPGYSPTSPTYSPTSPAYESN 96
[191][TOP]
>UniRef100_C6F0B0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0B0_PLAFA
Length = 188
Score = 117 bits (293), Expect = 7e-25
Identities = 66/120 (55%), Positives = 77/120 (64%), Gaps = 6/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTS 414
YSPTSP Y+ + YSPTSP + N Q SP YS ++ + SP SP YSPTS
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSP--VYSVTSPKYSPTSPKYSPTS 58
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-ASPDYSP----SAGYSPTLPGYSPSS 249
P YSPTSP YSPTSP YSP+SP YSP+SP + ASP+YSP S +SPT P YS SS
Sbjct: 59 PKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISS 118
Score = 104 bits (259), Expect = 6e-21
Identities = 55/92 (59%), Positives = 63/92 (68%), Gaps = 6/92 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPYSP-- 420
Y+ SP YS TSP YSPTSP Y PTSP Y+P S KYSP S YSP++ + SP SP +
Sbjct: 33 YNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNI 92
Query: 419 TSPNYSP---TSPSYSPTSPSYSPSSPTYSPS 333
SPNYSP TSP +SPTSP+YS SSP Y S
Sbjct: 93 ASPNYSPYSITSPKFSPTSPAYSISSPVYDKS 124
Score = 102 bits (254), Expect = 2e-20
Identities = 54/97 (55%), Positives = 60/97 (61%), Gaps = 9/97 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSP YSPTSP YSPTSP Y PTSP Y+P S KYSP+ + N SPYS TSP
Sbjct: 47 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVA-QNIASPNYSPYSITSP 105
Query: 410 NYSPTSPSYSPTSPSY---------SPSSPTYSPSSP 327
+SPTSP+YS +SP Y P SP Y SP
Sbjct: 106 KFSPTSPAYSISSPVYDKSGVVNAHQPMSPAYILQSP 142
[192][TOP]
>UniRef100_B9PMD7 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii
RepID=B9PMD7_TOXGO
Length = 1892
Score = 115 bits (289), Expect = 2e-24
Identities = 73/151 (48%), Positives = 86/151 (56%), Gaps = 31/151 (20%)
Frame = -3
Query: 590 YSPTSP----GYSPTSP-SYSPTSPSYGPTS-----------------------PSYNPQ 495
YSPTSP YSP+SP SYSPTSP+Y PTS PS NP
Sbjct: 1671 YSPTSPTLSPSYSPSSPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPM 1730
Query: 494 SAKYSPSIAYSPSNA--RLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-Y 324
S +S S +YSP++ + +P SP SP SP YSPTSP YSPTSP YSP+ YSP SP Y
Sbjct: 1731 SPHFSASTSYSPTSPVQQSNPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSY 1790
Query: 323 SSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 231
+G P SPS ++ P YSPSS Y+P
Sbjct: 1791 GAGQGP-LSPS--FTVQSPRYSPSSPAAYSP 1818
Score = 96.3 bits (238), Expect = 2e-18
Identities = 64/143 (44%), Positives = 77/143 (53%), Gaps = 13/143 (9%)
Frame = -3
Query: 590 YSPTSPGY--SPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT 417
YSPTSP +PTSP+ SP SP+Y PTSP Y+P S YSP+ A PYSP
Sbjct: 1740 YSPTSPVQQSNPTSPT-SPYSPAYSPTSPRYSPTSPMYSPTFA------------PYSPQ 1786
Query: 416 SPNY----SPTSPSYSPTSPSYSPSSP-TYSPSSPYSSGA-SPDYSPSAG-----YSPTL 270
SP+Y P SPS++ SP YSPSSP YSP+SP + A SP Y S YSPT
Sbjct: 1787 SPSYGAGQGPLSPSFTVQSPRYSPSSPAAYSPTSPMPNVAGSPSYEDSHAPGGDTYSPTS 1846
Query: 269 PGYSPSSTGQYTPHEGDKKDKTG 201
P Y + P + D+ G
Sbjct: 1847 PMYEANDPFSPDPFAAEVVDEVG 1869
Score = 62.0 bits (149), Expect = 3e-08
Identities = 59/168 (35%), Positives = 77/168 (45%), Gaps = 47/168 (27%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS------YSPTSPSYGP----TSPSYNP---QSAKYSPSIAYSPSNA 450
+SP +P SP SPS +SPTSP G +SPSY+P QSA + + S +
Sbjct: 1595 FSPRNP-LSPLSPSGPPGGVFSPTSPILGSALETSSPSYSPSSPQSAYFQNDGSSSAVDM 1653
Query: 449 RLSPASPYSP---TSPNYSPTSPSYSPTSPSYSPSS-PTYSPSSP-YS------------ 321
+SP S +YSPTSP+ SP SYSPSS P+YSP+SP YS
Sbjct: 1654 VISPGGVGSDGRGRGGSYSPTSPTLSP---SYSPSSPPSYSPTSPAYSPTSALSIASPVP 1710
Query: 320 -----------------SGASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
+ SP +S S YSPT P + T +P+
Sbjct: 1711 GVGGDGRTPLSPFSPSNNPMSPHFSASTSYSPTSPVQQSNPTSPTSPY 1758
[193][TOP]
>UniRef100_C9SR21 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SR21_9PEZI
Length = 1756
Score = 115 bits (289), Expect = 2e-24
Identities = 66/128 (51%), Positives = 83/128 (64%), Gaps = 17/128 (13%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSPSYGPTSPS---YNPQSAKYSPSIAYSPSN-ARLSPASPYSPTS 414
TSP +SP+SPS+SPTSP + PTSP+ Y+P S YSP+ SP + + SPA SPTS
Sbjct: 1603 TSPQFSPSSPSFSPTSPVHRPTSPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTS 1662
Query: 413 PNYSPTSPSYSPTSP----------SYSPSSPTYSPSSP---YSSGASPDYSPSAGYSPT 273
P+YSP SPSYSPTSP SYSP+SP++SP+SP YS + P+ SPT
Sbjct: 1663 PSYSPASPSYSPTSPNLHGAGPTSPSYSPASPSWSPTSPEHSYSPTSPSFQRPAMQQSPT 1722
Query: 272 LPGYSPSS 249
P YSP+S
Sbjct: 1723 SPNYSPTS 1730
Score = 114 bits (285), Expect = 6e-24
Identities = 68/126 (53%), Positives = 84/126 (66%), Gaps = 10/126 (7%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPS----YGPTSPSY--NPQSAKYSP-SIAYSPSNARLSPASP 429
SP SP YSPTSPSYSPTSP+ Y PTSP+ +P S YSP S +YSP++ L A
Sbjct: 1625 SPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTSPSYSPASPSYSPTSPNLHGA-- 1682
Query: 428 YSPTSPNYSPTSPSYSPTSP--SYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYS 258
PTSP+YSP SPS+SPTSP SYSP+SP++ + S SP+YSP S +SP PG
Sbjct: 1683 -GPTSPSYSPASPSWSPTSPEHSYSPTSPSFQRPAMQQSPTSPNYSPTSPSFSPRTPG-- 1739
Query: 257 PSSTGQ 240
PS +G+
Sbjct: 1740 PSGSGK 1745
Score = 107 bits (268), Expect = 5e-22
Identities = 69/130 (53%), Positives = 81/130 (62%), Gaps = 17/130 (13%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYSPTSPS--YGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPY--- 426
SPTSP S + YSPTSP Y PTSP + A+Y+ S +SPS+ SP SP
Sbjct: 1565 SPTSPFSSFAGAGGYSPTSPGGGYSPTSPLMDG-GARYATSPQFSPSSPSFSPTSPVHRP 1623
Query: 425 -SPTSPNYSPTSPSYSPTSPS----YSPSSPTY--SPSSPYSSGASPDYSPSA----GYS 279
SP SPNYSPTSPSYSPTSP+ YSP+SP SP+SP S ASP YSP++ G
Sbjct: 1624 TSPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTSPSYSPASPSYSPTSPNLHGAG 1683
Query: 278 PTLPGYSPSS 249
PT P YSP+S
Sbjct: 1684 PTSPSYSPAS 1693
Score = 107 bits (266), Expect = 9e-22
Identities = 62/113 (54%), Positives = 77/113 (68%), Gaps = 20/113 (17%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS----YSPTSPSY--GPTSPSYNPQSAKYSPSI----AYSPSNARLS 441
YSPTSP YSPTSP+ YSPTSP+ PTSPSY+P S YSP+ P++ S
Sbjct: 1631 YSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTSPSYSPASPSYSPTSPNLHGAGPTSPSYS 1690
Query: 440 PASP-YSPTSP--NYSPTSPSY-------SPTSPSYSPSSPTYSPSSPYSSGA 312
PASP +SPTSP +YSPTSPS+ SPTSP+YSP+SP++SP +P SG+
Sbjct: 1691 PASPSWSPTSPEHSYSPTSPSFQRPAMQQSPTSPNYSPTSPSFSPRTPGPSGS 1743
Score = 88.2 bits (217), Expect = 4e-16
Identities = 57/133 (42%), Positives = 75/133 (56%), Gaps = 13/133 (9%)
Frame = -3
Query: 590 YSPTSPGYS-PTSP-SYSPTSP--------SYGPTSPSYNPQSAKYSPSIAYSPSNARLS 441
+ SPG + TSP + SPTSP Y PTSP YSP+ AR +
Sbjct: 1548 FGGASPGRAGATSPFTTSPTSPFSSFAGAGGYSPTSPG-----GGYSPTSPLMDGGARYA 1602
Query: 440 PASPYSPTSPNYSPTSPSYSPTSPS---YSPSSPTYSPSSPYSSGASPDYSPSAGYSPTL 270
+ +SP+SP++SPTSP + PTSP+ YSP+SP+YSP+SP S SP+ SPT
Sbjct: 1603 TSPQFSPSSPSFSPTSPVHRPTSPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTS 1662
Query: 269 PGYSPSSTGQYTP 231
P YSP+S Y+P
Sbjct: 1663 PSYSPASP-SYSP 1674
Score = 76.6 bits (187), Expect = 1e-12
Identities = 55/130 (42%), Positives = 72/130 (55%), Gaps = 12/130 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYS-PTSP-SYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT 417
Y T G+ SP + TSP + PTSP + ++ + YSP+ SP YSPT
Sbjct: 1541 YGGTYGGFGGASPGRAGATSPFTTSPTSPF-----SSFAGAGGYSPT----SPGGGYSPT 1591
Query: 416 SPNYS-----PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP---- 267
SP TSP +SP+SPS+SP+SP + P+SP ASP+YSP S YSPT P
Sbjct: 1592 SPLMDGGARYATSPQFSPSSPSFSPTSPVHRPTSP----ASPNYSPTSPSYSPTSPTSPR 1647
Query: 266 GYSPSSTGQY 237
YSP+S Q+
Sbjct: 1648 HYSPTSPAQF 1657
[194][TOP]
>UniRef100_B0DB45 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0DB45_LACBS
Length = 1742
Score = 115 bits (287), Expect = 3e-24
Identities = 68/120 (56%), Positives = 82/120 (68%), Gaps = 7/120 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPS-YSPTSPSYGPTSPSYNPQS----AKYSPSIAYSPSNARLSPASP-Y 426
SP PGYSP+SP+ YSPTSPS+ P SP S + Y+ S Y PS AR +P SP Y
Sbjct: 1545 SPGGPGYSPSSPNVYSPTSPSFVPQSPFGGATSPFGTSPYAASPYYDPS-AR-NPTSPTY 1602
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
SPTSP + TSP YSPTSP YSP+SP++SP+SP S SP +SP S YSPT P +SP+S
Sbjct: 1603 SPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPAS 1662
Score = 94.4 bits (233), Expect = 6e-18
Identities = 55/113 (48%), Positives = 66/113 (58%), Gaps = 32/113 (28%)
Frame = -3
Query: 590 YSPTSPG-YSPTSPSY-----------------------------SPTSPSYGPTSPSYN 501
YSP+SP YSPTSPS+ +PTSP+Y PTSP+ N
Sbjct: 1551 YSPSSPNVYSPTSPSFVPQSPFGGATSPFGTSPYAASPYYDPSARNPTSPTYSPTSPALN 1610
Query: 500 PQSAKYSP-SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSP 348
S YSP S YSP++ SP SP YSP SP++SPTSP YSPTSPS+SP+SP
Sbjct: 1611 LTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPASP 1663
Score = 91.7 bits (226), Expect = 4e-17
Identities = 47/85 (55%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSP 411
+PTSP YSPTSP+ + TSP Y PTSP Y+P S ++SP++ R SP SP +SPTSP
Sbjct: 1596 NPTSPTYSPTSPALNLTSPGYSPTSPRYSPTSP------SFSPTSPRYSPQSPSFSPTSP 1649
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSP 336
YSPTSPS+SP SP S Y P
Sbjct: 1650 RYSPTSPSFSPASPRCKFLSIIYEP 1674
Score = 68.6 bits (166), Expect = 4e-10
Identities = 55/157 (35%), Positives = 73/157 (46%), Gaps = 41/157 (26%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNAR--------LSP--ASP 429
+PG +P Y SP + +P SA +SP + +A SP A
Sbjct: 1485 TPGQVAMTP-YDTNSPVWHDNLFKGDPASASFSPLASNGGEDAANFQYLGFGQSPLGAGG 1543
Query: 428 YSPTSPNYSPTSPS-YSPTSPSY-----------------------------SPSSPTYS 339
SP P YSP+SP+ YSPTSPS+ +P+SPTYS
Sbjct: 1544 MSPGGPGYSPSSPNVYSPTSPSFVPQSPFGGATSPFGTSPYAASPYYDPSARNPTSPTYS 1603
Query: 338 PSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P+SP + SP YSP S YSPT P +SP+S +Y+P
Sbjct: 1604 PTSPALNLTSPGYSPTSPRYSPTSPSFSPTSP-RYSP 1639
Score = 59.3 bits (142), Expect = 2e-07
Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYS-PSIAYSP 459
+SPTSP YSP SPS+SPTSP Y PTSPS++P S + SI Y P
Sbjct: 1630 FSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPASPRCKFLSIIYEP 1674
[195][TOP]
>UniRef100_B6KEC6 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
RepID=B6KEC6_TOXGO
Length = 1892
Score = 114 bits (286), Expect = 4e-24
Identities = 72/151 (47%), Positives = 86/151 (56%), Gaps = 31/151 (20%)
Frame = -3
Query: 590 YSPTSP----GYSPTSP-SYSPTSPSYGPTS-----------------------PSYNPQ 495
YSPTSP YSP++P SYSPTSP+Y PTS PS NP
Sbjct: 1671 YSPTSPTLSPSYSPSAPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSNNPM 1730
Query: 494 SAKYSPSIAYSPSNA--RLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-Y 324
S +S S +YSP++ + +P SP SP SP YSPTSP YSPTSP YSP+ YSP SP Y
Sbjct: 1731 SPHFSASTSYSPTSPVQQSNPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSY 1790
Query: 323 SSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 231
+G P SPS ++ P YSPSS Y+P
Sbjct: 1791 GAGQGP-LSPS--FTVQSPRYSPSSPAAYSP 1818
Score = 96.3 bits (238), Expect = 2e-18
Identities = 64/143 (44%), Positives = 77/143 (53%), Gaps = 13/143 (9%)
Frame = -3
Query: 590 YSPTSPGY--SPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT 417
YSPTSP +PTSP+ SP SP+Y PTSP Y+P S YSP+ A PYSP
Sbjct: 1740 YSPTSPVQQSNPTSPT-SPYSPAYSPTSPRYSPTSPMYSPTFA------------PYSPQ 1786
Query: 416 SPNY----SPTSPSYSPTSPSYSPSSP-TYSPSSPYSSGA-SPDYSPSAG-----YSPTL 270
SP+Y P SPS++ SP YSPSSP YSP+SP + A SP Y S YSPT
Sbjct: 1787 SPSYGAGQGPLSPSFTVQSPRYSPSSPAAYSPTSPMPNVAGSPSYEDSHAPGGDTYSPTS 1846
Query: 269 PGYSPSSTGQYTPHEGDKKDKTG 201
P Y + P + D+ G
Sbjct: 1847 PMYEANDPFSPDPFAAEVVDEVG 1869
Score = 61.2 bits (147), Expect = 6e-08
Identities = 57/168 (33%), Positives = 75/168 (44%), Gaps = 47/168 (27%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS------YSPTSPSYGP----TSPSYNP---QSAKYSPSIAYSPSNA 450
+SP +P SP SPS +SPTSP G +SPSY+P QSA + + S +
Sbjct: 1595 FSPRNP-LSPLSPSGPPGGVFSPTSPILGSALETSSPSYSPSSPQSAYFQNDGSSSAVDM 1653
Query: 449 RLSPASPYSP---TSPNYSPTSPSYSPTSPSYSPS--------SPTYSPS---------- 333
+SP S +YSPTSP+ SP SYSPS SP YSP+
Sbjct: 1654 VISPGGVGSDGRGRGGSYSPTSPTLSP---SYSPSAPPSYSPTSPAYSPTSALSIASPVP 1710
Query: 332 -------------SPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
SP ++ SP +S S YSPT P + T +P+
Sbjct: 1711 GVGGDGRTPLSPFSPSNNPMSPHFSASTSYSPTSPVQQSNPTSPTSPY 1758
Score = 57.0 bits (136), Expect = 1e-06
Identities = 44/131 (33%), Positives = 54/131 (41%), Gaps = 38/131 (29%)
Frame = -3
Query: 527 YGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSP 348
+ PT + ++ SP +SP N LSP SP P +SPTSP + SSP
Sbjct: 1575 FSPTQQTPRSPTSPLSPLSCFSPRNP-LSPLSPSGPPGGVFSPTSPILGS---ALETSSP 1630
Query: 347 TYSPSSPYSS------------------------------------GASPDYSPSA--GY 282
+YSPSSP S+ SP YSPSA Y
Sbjct: 1631 SYSPSSPQSAYFQNDGSSSAVDMVISPGGVGSDGRGRGGSYSPTSPTLSPSYSPSAPPSY 1690
Query: 281 SPTLPGYSPSS 249
SPT P YSP+S
Sbjct: 1691 SPTSPAYSPTS 1701
[196][TOP]
>UniRef100_Q9C428 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis
macrandra RepID=Q9C428_9FUNG
Length = 1603
Score = 114 bits (285), Expect = 6e-24
Identities = 59/91 (64%), Positives = 63/91 (69%)
Frame = -3
Query: 566 SPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS 387
SPTSP YSPTSPSY PTSPSY P S PS YSPTSP+YSPTSPS
Sbjct: 1532 SPTSPGYSPTSPSYSPTSPSYTPTS----------PS---------YSPTSPSYSPTSPS 1572
Query: 386 YSPTSPSYSPSSPTYSPSSPYSSGASPDYSP 294
YSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1603
Score = 97.1 bits (240), Expect = 1e-18
Identities = 65/158 (41%), Positives = 79/158 (50%), Gaps = 38/158 (24%)
Frame = -3
Query: 590 YSPTSPGYSP------TSPSYSPTSPSYGPTSPSYNP-QSAKYSPSIAYSPSNARL---- 444
+ P SPG +P P +SP G + + P S SP + + RL
Sbjct: 1440 FYPASPGGAPYENYPGDQPMFSPIGVDSGRDTGRWTPGMSGGQSPYASTHRCDPRLMNKR 1499
Query: 443 ---SPASPY-----------------------SPTSPNYSPTSPSYSPTSPSYSPSSPTY 342
SP+SP SPTSP YSPTSPSYSPTSPSY+P+SP+Y
Sbjct: 1500 SLRSPSSPVYSMWLASFGLLQPFLIVRCFGVISPTSPGYSPTSPSYSPTSPSYTPTSPSY 1559
Query: 341 SPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
SP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1560 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1596
Score = 77.4 bits (189), Expect = 8e-13
Identities = 40/71 (56%), Positives = 42/71 (59%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S P
Sbjct: 1559 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS--------------------------P 1592
Query: 410 NYSPTSPSYSP 378
+YSPTSPSYSP
Sbjct: 1593 SYSPTSPSYSP 1603
[197][TOP]
>UniRef100_C6F1F1 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F1_PLAVI
Length = 211
Score = 114 bits (284), Expect = 8e-24
Identities = 69/141 (48%), Positives = 82/141 (58%), Gaps = 27/141 (19%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS-------YSPTSPSYGPTSPS-----YNPQSAKYSPSIA------- 468
YSPTSP Y T+P+ + T Y PTSP+ NP KY ++
Sbjct: 1 YSPTSPTYHLTNPASGGGSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTS 60
Query: 467 --YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-ASPDY 300
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSPSSP + +SP Y
Sbjct: 61 PKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHY 120
Query: 299 SP----SAGYSPTLPGYSPSS 249
SP S +SPT P YS SS
Sbjct: 121 SPYAIASPKFSPTSPAYSISS 141
Score = 113 bits (283), Expect = 1e-23
Identities = 60/106 (56%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPY--SP 420
YS TSP YSPTSP YSPTSP Y PTSP Y+P S KYSP S YSP++ + SP+SP +P
Sbjct: 56 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNP 115
Query: 419 TSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 291
+SP+YSP SP +SPTSP+YS SSP Y S S + SP+
Sbjct: 116 SSPHYSPYAIASPKFSPTSPAYSISSPVYDQSGNARSKSQHPLSPA 161
[198][TOP]
>UniRef100_A5K7P4 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5K7P4_PLAVI
Length = 2379
Score = 114 bits (284), Expect = 8e-24
Identities = 72/141 (51%), Positives = 84/141 (59%), Gaps = 27/141 (19%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS-------YSPTSPSYGPTSPS-----YNPQSAKY----SP-----S 474
YSPTSP Y T+P+ + T Y PTSP+ NP KY SP S
Sbjct: 2169 YSPTSPTYHLTNPASGGGSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTS 2228
Query: 473 IAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY-SSGASPDY 300
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSPSSP ++ +SP Y
Sbjct: 2229 PKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHY 2288
Query: 299 SP----SAGYSPTLPGYSPSS 249
SP S +SPT P YS SS
Sbjct: 2289 SPYAIASPKFSPTSPAYSISS 2309
Score = 113 bits (283), Expect = 1e-23
Identities = 60/106 (56%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPY--SP 420
YS TSP YSPTSP YSPTSP Y PTSP Y+P S KYSP S YSP++ + SP+SP +P
Sbjct: 2224 YSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNP 2283
Query: 419 TSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 291
+SP+YSP SP +SPTSP+YS SSP Y S S + SP+
Sbjct: 2284 SSPHYSPYAIASPKFSPTSPAYSISSPVYDQSGNARSKSQHPLSPA 2329
Score = 108 bits (270), Expect = 3e-22
Identities = 63/129 (48%), Positives = 75/129 (58%), Gaps = 21/129 (16%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP---------- 429
SP YSPTSP+Y T+P+ G S N A YSP+ SP+N +L +P
Sbjct: 2166 SPSYSPTSPTYHLTNPASGGGSSGLNGTKAYYSPT---SPTN-QLDEVNPNMMKYHSVVS 2221
Query: 428 ---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGY-- 282
YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSPS+
Sbjct: 2222 PVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPN 2281
Query: 281 SPTLPGYSP 255
+P+ P YSP
Sbjct: 2282 NPSSPHYSP 2290
Score = 81.3 bits (199), Expect = 5e-14
Identities = 70/206 (33%), Positives = 79/206 (38%), Gaps = 92/206 (44%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSP--------------------------------SYGPTSPS 507
+SPT SPTS +SP SP +Y SP
Sbjct: 2073 FSPTQSPKSPTSVIHSPFSPFDNHNQQALDPSMLFSPKNNNVGSSSNSMSMMNYNVFSPK 2132
Query: 506 YNPQSAKYSPSIAYSPSNA-----------------RLSPASP----------------- 429
N S + SP++ YSP+ A SP SP
Sbjct: 2133 ANLNSIQ-SPAMLYSPNRALDLFSPKQQTQNNIYSPSYSPTSPTYHLTNPASGGGSSGLN 2191
Query: 428 -----YSPTSPN--------------------YSPTSPSYSPTSPSYSPSSPTYSPSSPY 324
YSPTSP YS TSP YSPTSP YSP+SP YSP+SP
Sbjct: 2192 GTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPK 2251
Query: 323 SSGASPDYSP-SAGYSPTLPGYSPSS 249
S SP YSP S YSPT P YSPSS
Sbjct: 2252 YSPTSPKYSPTSPKYSPTSPQYSPSS 2277
Score = 75.1 bits (183), Expect = 4e-12
Identities = 64/204 (31%), Positives = 75/204 (36%), Gaps = 91/204 (44%)
Frame = -3
Query: 569 YSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARL------------------ 444
+SPT SPTS + P SP N PS+ +SP N +
Sbjct: 2073 FSPTQSPKSPTSVIHSPFSPFDNHNQQALDPSMLFSPKNNNVGSSSNSMSMMNYNVFSPK 2132
Query: 443 -------SPASPYSPT-----------------SPNYSPTSPS----------------- 387
SPA YSP SP+YSPTSP+
Sbjct: 2133 ANLNSIQSPAMLYSPNRALDLFSPKQQTQNNIYSPSYSPTSPTYHLTNPASGGGSSGLNG 2192
Query: 386 -------------------------------YSPTSPSYSPSSPTYSPSSPYSSGASPDY 300
YS TSP YSP+SP YSP+SP S SP Y
Sbjct: 2193 TKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKY 2252
Query: 299 SP-SAGYSPTLPGYSPSSTGQYTP 231
SP S YSPT P YSP+S QY+P
Sbjct: 2253 SPTSPKYSPTSPKYSPTSP-QYSP 2275
[199][TOP]
>UniRef100_C6F1F5 RNA polymerase II (Fragment) n=1 Tax=Plasmodium fragile
RepID=C6F1F5_PLAFR
Length = 210
Score = 111 bits (277), Expect = 5e-23
Identities = 71/150 (47%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YS TSP YSPTSP YSPTSP Y PTSP Y+P S KYSP+ SP YSPTSP
Sbjct: 56 YSVTSPKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPT---SPK---------YSPTSP 103
Query: 410 NYSPTSP-SYSPTSPSYSP---SSPTYSPSSPYSSGASPDYSPSA-----GYSPTLPGYS 258
YSPTSP +P+SP YSP +SP +SP+SP S +SP Y SA P P Y
Sbjct: 104 QYSPTSPIPNNPSSPHYSPYAIASPKFSPTSPAYSISSPVYDRSANARNKNQHPLSPAYI 163
Query: 257 PSSTGQYTPHEGDKKDKTGKKDASKDDKGN 168
S Q H D + + A+ D+ N
Sbjct: 164 LQSPVQVKQHIQDVSVFSPIQQANADEAQN 193
Score = 96.7 bits (239), Expect = 1e-18
Identities = 59/126 (46%), Positives = 72/126 (57%), Gaps = 14/126 (11%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS-------YGPTSPS-----YNPQSAKYSPSIAYSPSNAR 447
YSPTSP Y ++ + + S Y PTSP+ NP KY + SP +
Sbjct: 1 YSPTSPTYHLSNNANAGGSAGLNDPKSFYSPTSPTNQLGEMNPNMMKYHSVV--SPVYSV 58
Query: 446 LSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGY--SPT 273
SP YSPTSP YSPTSP Y PTSP YSP+SP YSP+SP S SP YSP++ +P+
Sbjct: 59 TSPK--YSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIPNNPS 116
Query: 272 LPGYSP 255
P YSP
Sbjct: 117 SPHYSP 122
Score = 65.1 bits (157), Expect = 4e-09
Identities = 45/108 (41%), Positives = 50/108 (46%), Gaps = 42/108 (38%)
Frame = -3
Query: 428 YSPTSPN---------------------YSPTSPS--------------------YSPTS 372
YSPTSP YSPTSP+ YS TS
Sbjct: 1 YSPTSPTYHLSNNANAGGSAGLNDPKSFYSPTSPTNQLGEMNPNMMKYHSVVSPVYSVTS 60
Query: 371 PSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 231
P YSP+SP YSP+SP SP YSP S YSPT P YSP+S QY+P
Sbjct: 61 PKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSP-QYSP 107
[200][TOP]
>UniRef100_C6F1F6 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F6_PLAVI
Length = 211
Score = 110 bits (276), Expect = 6e-23
Identities = 68/141 (48%), Positives = 81/141 (57%), Gaps = 27/141 (19%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS-------YSPTSPSYGPTSPS-----YNPQSAKYSPSIA------- 468
YSPTSP Y T+P+ + T Y PTSP+ NP KY ++
Sbjct: 1 YSPTSPTYHLTNPASGGGSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTS 60
Query: 467 --YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-ASPDY 300
SP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSPSSP + +SP Y
Sbjct: 61 PKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHY 120
Query: 299 SP----SAGYSPTLPGYSPSS 249
SP S +SPT P YS SS
Sbjct: 121 SPYAIASPKFSPTSPAYSISS 141
Score = 110 bits (275), Expect = 8e-23
Identities = 59/106 (55%), Positives = 71/106 (66%), Gaps = 6/106 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASPY--SP 420
YS TSP SPTSP YSPTSP Y PTSP Y+P S KYSP S YSP++ + SP+SP +P
Sbjct: 56 YSVTSPKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNP 115
Query: 419 TSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 291
+SP+YSP SP +SPTSP+YS SSP Y S S + SP+
Sbjct: 116 SSPHYSPYAIASPKFSPTSPAYSISSPVYDQSGNARSKSQHPLSPA 161
[201][TOP]
>UniRef100_A7NVN8 Chromosome chr18 scaffold_1, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7NVN8_VITVI
Length = 89
Score = 110 bits (274), Expect = 1e-22
Identities = 53/75 (70%), Positives = 60/75 (80%), Gaps = 7/75 (9%)
Frame = -3
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD-------YSPSAGYSPTLPGY 261
+S + SPTSPSYSPTSPSYSP+SPTYSP+SPY+SG SPD YSPSAGYSP+ PGY
Sbjct: 9 SSYSCSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPSAGYSPSAPGY 68
Query: 260 SPSSTGQYTPHEGDK 216
SPSST QYTP +K
Sbjct: 69 SPSSTSQYTPQMSNK 83
Score = 83.2 bits (204), Expect = 1e-14
Identities = 47/86 (54%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = -3
Query: 560 TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYS 381
+S S SPTSPSY PTSPSY+P S YSP+ SP N+ +SP YSP+SP YSP S YS
Sbjct: 9 SSYSCSPTSPSYSPTSPSYSPASPTYSPT---SPYNSGVSP--DYSPSSPQYSP-SAGYS 62
Query: 380 PTSPSYSPSSPT-YSPSSPYSSGASP 306
P++P YSPSS + Y+P SP
Sbjct: 63 PSAPGYSPSSTSQYTPQMSNKDNGSP 88
Score = 82.4 bits (202), Expect = 2e-14
Identities = 45/81 (55%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
SPTSP YSPTSPSYSP SP+Y PTSP YN + SP YSPS+ + SP++ YSP++P
Sbjct: 14 SPTSPSYSPTSPSYSPASPTYSPTSP-YN---SGVSPD--YSPSSPQYSPSAGYSPSAPG 67
Query: 407 YSPTSPS-YSPTSPSYSPSSP 348
YSP+S S Y+P + SP
Sbjct: 68 YSPSSTSQYTPQMSNKDNGSP 88
[202][TOP]
>UniRef100_A4RMP1 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4RMP1_MAGGR
Length = 1757
Score = 103 bits (257), Expect = 1e-20
Identities = 71/150 (47%), Positives = 84/150 (56%), Gaps = 30/150 (20%)
Frame = -3
Query: 590 YSPTSP--GYSPTSPS-----YSPTSPSYGPTSPSYNPQSAKY----SPSIAYSPSNARL 444
YSPTSP GYSPTSP Y +SPS+ P+SPS+ P S S+ YSP++
Sbjct: 1581 YSPTSPMAGYSPTSPMMDGGRYGASSPSFSPSSPSFQPTSPIMRHGAGDSMGYSPTSPTY 1640
Query: 443 SPASP------YSPTSP---NYSPTSPSYSPTSPSYSP---SSPTYSPSSPYSSGASPDY 300
P SP YSPTSP SPTSP YSP SPS+SP +SP Y SP ASP
Sbjct: 1641 QPGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPSFSPGGATSPMYYVGSP--QHASPT- 1697
Query: 299 SPSAGYSPTLPGY-------SPSSTGQYTP 231
SP+A YSPT P + SP+S G Y+P
Sbjct: 1698 SPNAHYSPTSPSFQRSPAQASPTSPGPYSP 1727
Score = 93.2 bits (230), Expect = 1e-17
Identities = 67/153 (43%), Positives = 84/153 (54%), Gaps = 33/153 (21%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSP----------SYGPTSPSYNPQSAK-----YSPSIAYSPS 456
Y +SP +SP+SPS+ PTSP Y PTSP+Y P S YSP+ SP+
Sbjct: 1602 YGASSPSFSPSSPSFQPTSPIMRHGAGDSMGYSPTSPTYQPGSPTGGDNHYSPT---SPA 1658
Query: 455 NARLSPASP-YSPTSPNYSP---TSPSY--------SPTSPS--YSPSSPTYSPSSPYSS 318
SP SP YSP SP++SP TSP Y SPTSP+ YSP+SP++ S +S
Sbjct: 1659 QFGASPTSPLYSPASPSFSPGGATSPMYYVGSPQHASPTSPNAHYSPTSPSFQRSPAQAS 1718
Query: 317 GASPD-YSP-SAGYSPTLPGYSPSSTGQ--YTP 231
SP YSP S +SP PG + S GQ Y+P
Sbjct: 1719 PTSPGPYSPTSPSFSPRSPGRNNRSGGQDSYSP 1751
Score = 93.2 bits (230), Expect = 1e-17
Identities = 62/122 (50%), Positives = 72/122 (59%), Gaps = 21/122 (17%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS-----YSPTSPSY---GPTSPSYNPQSAKYSPSIAYSPSNARLSPA 435
YSPTSP Y P SP+ YSPTSP+ PTSP Y+P S +SP A SP SP
Sbjct: 1633 YSPTSPTYQPGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPSFSPGGATSPMYYVGSPQ 1692
Query: 434 SPYSPTSPN--YSPTSPSY-------SPTSPS-YSPSSPTYSPSSP---YSSGASPDYSP 294
SPTSPN YSPTSPS+ SPTSP YSP+SP++SP SP SG YSP
Sbjct: 1693 HA-SPTSPNAHYSPTSPSFQRSPAQASPTSPGPYSPTSPSFSPRSPGRNNRSGGQDSYSP 1751
Query: 293 SA 288
++
Sbjct: 1752 TS 1753
Score = 79.3 bits (194), Expect = 2e-13
Identities = 54/105 (51%), Positives = 63/105 (60%), Gaps = 29/105 (27%)
Frame = -3
Query: 590 YSPTSP---GYSPTSPSYSPTSPSYGP---TSPSY---NPQSAK-YSPSIAYSPSN---- 453
YSPTSP G SPTSP YSP SPS+ P TSP Y +PQ A SP+ YSP++
Sbjct: 1652 YSPTSPAQFGASPTSPLYSPASPSFSPGGATSPMYYVGSPQHASPTSPNAHYSPTSPSFQ 1711
Query: 452 ---ARLSPASP--YSPTSPNYSPTSP----------SYSPTSPSY 363
A+ SP SP YSPTSP++SP SP SYSPTSPS+
Sbjct: 1712 RSPAQASPTSPGPYSPTSPSFSPRSPGRNNRSGGQDSYSPTSPSH 1756
Score = 70.1 bits (170), Expect = 1e-10
Identities = 53/129 (41%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSY-----GPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYS 423
SPT +SP S T + G + S NP + SP SP + SP SP+S
Sbjct: 1519 SPTMGNFSPIMSGGSDTPTGFATEYGGGSLGSMNPYGSGTSPRPT-SPFST--SPTSPFS 1575
Query: 422 PTSPNYSPTSP--SYSPTSPS-----YSPSSPTYSPSSPYSSGASP----DYSPSAGYSP 276
+YSPTSP YSPTSP Y SSP++SPSSP SP S GYSP
Sbjct: 1576 AGYGSYSPTSPMAGYSPTSPMMDGGRYGASSPSFSPSSPSFQPTSPIMRHGAGDSMGYSP 1635
Query: 275 TLPGYSPSS 249
T P Y P S
Sbjct: 1636 TSPTYQPGS 1644
[203][TOP]
>UniRef100_A5DCV1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DCV1_PICGU
Length = 224
Score = 87.4 bits (215), Expect(2) = 1e-19
Identities = 46/76 (60%), Positives = 53/76 (69%), Gaps = 4/76 (5%)
Frame = -3
Query: 446 LSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGY----S 279
LSP+ YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+
Sbjct: 131 LSPS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPNVAQLLTNF 188
Query: 278 PTLPGYSPSSTGQYTP 231
PT+ Y PS TP
Sbjct: 189 PTVLTYFPSLLTHVTP 204
Score = 33.1 bits (74), Expect(2) = 1e-19
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = -1
Query: 577 LLATALLHQVTVQHHQATVLRLQATTLSLLNIAH 476
L AT LL QVTVQ HQ TVL Q T L L + H
Sbjct: 90 LQATHLLRQVTVQLHQVTVLLRQVTVL-LRQVTH 122
Score = 83.6 bits (205), Expect = 1e-14
Identities = 46/85 (54%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSP 399
SP YSPTSPSYSPTSPSY PTSPSY+P S Y SPTSP+YSP
Sbjct: 132 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY-------------------SPTSPSYSP 172
Query: 398 TSPSYSPTSPSYSPSSP---TYSPS 333
TSPSYSP + P TY PS
Sbjct: 173 TSPSYSPNVAQLLTNFPTVLTYFPS 197
Score = 79.3 bits (194), Expect = 2e-13
Identities = 40/63 (63%), Positives = 46/63 (73%), Gaps = 3/63 (4%)
Frame = -3
Query: 431 PYSPT---SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGY 261
P+ PT SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPT P Y
Sbjct: 124 PHHPTHLLSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP------SYSPTSPSY 177
Query: 260 SPS 252
SP+
Sbjct: 178 SPN 180
Score = 79.3 bits (194), Expect = 2e-13
Identities = 38/50 (76%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARL 444
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP S +YSP+ A+L
Sbjct: 135 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPNVAQL 184
Score = 77.0 bits (188), Expect = 1e-12
Identities = 34/46 (73%), Positives = 38/46 (82%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSN 453
YSPTSP YSPTSPSYSPTSPSY PTSPSY+P S YSP++A +N
Sbjct: 142 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPNVAQLLTN 187
[204][TOP]
>UniRef100_A8N128 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130
RepID=A8N128_COPC7
Length = 1642
Score = 97.8 bits (242), Expect = 6e-19
Identities = 62/134 (46%), Positives = 73/134 (54%), Gaps = 31/134 (23%)
Frame = -3
Query: 590 YSPTSPGYSP---------------------------TSPSYSPTSPSYGPTSPSYNPQS 492
YSPTSPG P TSP+YSPTSP G TSP+Y+P S
Sbjct: 1506 YSPTSPGMVPRSPYGAPTSPFSNQYATSPFYDSRRQATSPTYSPTSPIAGLTSPAYSPTS 1565
Query: 491 AKYSPSIAYSPSNARLSPASPY--SPTSPNYSPTSPSYSPT--SPSYSPSSPTYSPSSPY 324
+SP+ SP+ SP SP SP SPNYSP SPSYSP SP+YSPSSPT+SP+SP
Sbjct: 1566 PGFSPT---SPNG--YSPQSPNFGSPASPNYSPASPSYSPAPASPNYSPSSPTWSPTSPA 1620
Query: 323 SSGASPDYSPSAGY 282
P + S+ Y
Sbjct: 1621 HDQNGPTNNRSSAY 1634
Score = 96.7 bits (239), Expect = 1e-18
Identities = 53/100 (53%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPS-YNPQSAKYSPSIAYSPSNARLSPASP-YSPT 417
YSPTSP TSP+YSPTSP + PTSP+ Y+PQS + SP++ SPASP YSP
Sbjct: 1547 YSPTSPIAGLTSPAYSPTSPGFSPTSPNGYSPQSPNFG-----SPASPNYSPASPSYSPA 1601
Query: 416 --SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 303
SPNYSP+SP++SPTSP++ + PT + SS Y S D
Sbjct: 1602 PASPNYSPSSPTWSPTSPAHDQNGPTNNRSSAYQQSPSWD 1641
Score = 95.9 bits (237), Expect = 2e-18
Identities = 65/149 (43%), Positives = 82/149 (55%), Gaps = 15/149 (10%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPSIAYSPSNA--------RLSPA 435
SP G P YSP+SP+ Y PTSP P+S +P+ +S A R + +
Sbjct: 1485 SPHGAGGMSPGPGYSPSSPNAYSPTSPGMVPRSPYGAPTSPFSNQYATSPFYDSRRQATS 1544
Query: 434 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSP-YSSGASPDYSP-SAGYS--PTL 270
YSPTSP TSP+YSPTSP +SP+SP YSP SP + S ASP+YSP S YS P
Sbjct: 1545 PTYSPTSPIAGLTSPAYSPTSPGFSPTSPNGYSPQSPNFGSPASPNYSPASPSYSPAPAS 1604
Query: 269 PGYSPSS-TGQYTPHEGDKKDKTGKKDAS 186
P YSPSS T T D+ T + ++
Sbjct: 1605 PNYSPSSPTWSPTSPAHDQNGPTNNRSSA 1633
[205][TOP]
>UniRef100_UPI000151A8B4 hypothetical protein PGUG_01106 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B4
Length = 224
Score = 85.1 bits (209), Expect(2) = 7e-19
Identities = 45/76 (59%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Frame = -3
Query: 446 LSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGY----S 279
LSP+ YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+
Sbjct: 131 LSPS--YSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPNVAQLLTNF 188
Query: 278 PTLPGYSPSSTGQYTP 231
PT+ Y PS TP
Sbjct: 189 PTVLTYFPSLLTHVTP 204
Score = 33.1 bits (74), Expect(2) = 7e-19
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = -1
Query: 577 LLATALLHQVTVQHHQATVLRLQATTLSLLNIAH 476
L AT LL QVTVQ HQ TVL Q T L L + H
Sbjct: 90 LQATHLLRQVTVQLHQVTVLLRQVTVL-LRQVTH 122
Score = 81.3 bits (199), Expect = 5e-14
Identities = 45/85 (52%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSP 399
SP YSPTSPSYSPTSPSY PTSP Y+P S Y SPTSP+YSP
Sbjct: 132 SPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSY-------------------SPTSPSYSP 172
Query: 398 TSPSYSPTSPSYSPSSP---TYSPS 333
TSPSYSP + P TY PS
Sbjct: 173 TSPSYSPNVAQLLTNFPTVLTYFPS 197
Score = 78.6 bits (192), Expect = 3e-13
Identities = 40/63 (63%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Frame = -3
Query: 431 PYSPT---SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGY 261
P+ PT SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSPT P Y
Sbjct: 124 PHHPTHLLSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSP------SYSPTSPSY 177
Query: 260 SPS 252
SP+
Sbjct: 178 SPN 180
Score = 77.0 bits (188), Expect = 1e-12
Identities = 37/50 (74%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARL 444
YSPTSP YSPTSPSYSPTSP Y PTSPSY+P S YSP S +YSP+ A+L
Sbjct: 135 YSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPNVAQL 184
Score = 74.7 bits (182), Expect = 5e-12
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSN 453
YSPTSP YSPTSP YSPTSPSY PTSPSY+P S YSP++A +N
Sbjct: 142 YSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPNVAQLLTN 187
[206][TOP]
>UniRef100_Q4N0F9 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4N0F9_THEPA
Length = 1681
Score = 94.4 bits (233), Expect = 6e-18
Identities = 60/121 (49%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPS--YGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN- 408
SP YSPTSP SPTSP+ PTSP Y+P + SP+ A SP++ SPA YSPTSPN
Sbjct: 1575 SPAYSPTSPM-SPTSPANALSPTSPVYSPAYSPTSPTSAMSPTSPVYSPA--YSPTSPNL 1631
Query: 407 -YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 231
Y+PTSP YSP +YSP+SP Y YSP++ SPT P YSP T ++P
Sbjct: 1632 GYAPTSPVYSP---AYSPTSPNYG------------YSPTSPLSPTSPAYSP--TDPFSP 1674
Query: 230 H 228
+
Sbjct: 1675 N 1675
Score = 87.8 bits (216), Expect = 6e-16
Identities = 68/128 (53%), Positives = 76/128 (59%), Gaps = 9/128 (7%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPS--YGPTS---PSYNPQSAKYSPSIAYSPSNARLSPASPYS 423
SPTSP SPTSP SPTSP PTS P Y+P + SP SP+NA LSP SP
Sbjct: 1544 SPTSP-MSPTSPM-SPTSPMSPMSPTSAMSPVYSPAYSPTSPMSPTSPANA-LSPTSPVY 1600
Query: 422 PTSPNYSPTSPS--YSPTSPSYSPSSPTYSPSSPYSSGA--SPDYSPSAGYSPTLPGYSP 255
SP YSPTSP+ SPTSP YSP+ YSP+SP A SP YSP+ YSPT P Y
Sbjct: 1601 --SPAYSPTSPTSAMSPTSPVYSPA---YSPTSPNLGYAPTSPVYSPA--YSPTSPNYGY 1653
Query: 254 SSTGQYTP 231
S T +P
Sbjct: 1654 SPTSPLSP 1661
Score = 87.8 bits (216), Expect = 6e-16
Identities = 55/107 (51%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS--YSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT 417
YSPTSP SPTSP+ SPTSP Y P +P SA S YSP+ + SP Y+PT
Sbjct: 1578 YSPTSP-MSPTSPANALSPTSPVYSPAYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPT 1636
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSP 276
SP Y SP+YSPTSP+Y YSP+SP S SP YSP+ +SP
Sbjct: 1637 SPVY---SPAYSPTSPNYG-----YSPTSPLSP-TSPAYSPTDPFSP 1674
Score = 85.9 bits (211), Expect = 2e-15
Identities = 59/115 (51%), Positives = 71/115 (61%), Gaps = 2/115 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
+SPTSP TSP SPTSP PTSP +P S + S YSP+ + SP SP SP +
Sbjct: 1540 FSPTSP----TSPM-SPTSPM-SPTSPM-SPMSPTSAMSPVYSPAYSPTSPMSPTSPANA 1592
Query: 410 NYSPTSPSYSPTSPSYSPSSPT--YSPSSPYSSGASPDYSPSAGYSPTLPGYSPS 252
SPTSP Y SP+YSP+SPT SP+SP S A SP+ GY+PT P YSP+
Sbjct: 1593 -LSPTSPVY---SPAYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPTSPVYSPA 1643
Score = 55.5 bits (132), Expect = 3e-06
Identities = 52/120 (43%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPT--SPSYNPQSAKYSPSIAYSPSNARL--------SPASP 429
SP SP SPS T + P SP+Y I PS L SP
Sbjct: 1483 SPDSSPLSPSTPATKQTMSPMAFSPTYTSLMMSPVGGIGMGPSTPGLMVDTYALGGSFSP 1542
Query: 428 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
SPTSP SPTSP SPTSP SP SPT S SP YSP+ YSPT P SP+S
Sbjct: 1543 TSPTSP-MSPTSPM-SPTSPM-SPMSPT--------SAMSPVYSPA--YSPTSP-MSPTS 1588
[207][TOP]
>UniRef100_Q01K81 H0525C06.3 protein n=2 Tax=Oryza sativa RepID=Q01K81_ORYSA
Length = 350
Score = 93.6 bits (231), Expect = 1e-17
Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 10/126 (7%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSP 399
SP Y+P++P SP Y P++P S ++PS +SPS SP YSP++P
Sbjct: 130 SPEYTPSTPWRRAASPDYTPSTPWRRAASPDHAPSPPWSPSRRAASP--DYSPSTPPRRA 187
Query: 398 TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSP----TLPGYSPS------S 249
SP YSP++P +SP Y+PS+P+ ASPDY+PS +SP + P YSPS +
Sbjct: 188 ASPDYSPSTPPRRAASPDYTPSTPWRRAASPDYAPSTPWSPPRRASSPDYSPSTPPRRAA 247
Query: 248 TGQYTP 231
+ YTP
Sbjct: 248 SPNYTP 253
Score = 82.8 bits (203), Expect = 2e-14
Identities = 52/134 (38%), Positives = 67/134 (50%), Gaps = 19/134 (14%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQ-------SAKYSPSIAYSPSNARLSPA- 435
YSP++P SP YSP++P SP Y P S Y+PS +SP SP
Sbjct: 178 YSPSTPPRRAASPDYSPSTPPRRAASPDYTPSTPWRRAASPDYAPSTPWSPPRRASSPDY 237
Query: 434 SPYSP----TSPNYSPT-------SPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA 288
SP +P SPNY+P+ SP YSP+SP +SP Y+ SP ASPDY+PS
Sbjct: 238 SPSTPPRRAASPNYTPSTPPRRAASPDYSPSSPPRRAASPEYTQLSPPRRAASPDYNPST 297
Query: 287 GYSPTLPGYSPSST 246
+P + S T
Sbjct: 298 PPPSPVPSDAGSRT 311
Score = 82.4 bits (202), Expect = 2e-14
Identities = 49/124 (39%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPA-SPYSPTSPNYS 402
SP YSP++P SP Y P++P S Y+PS +P SP +P +P SP
Sbjct: 175 SPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTPS---TPWRRAASPDYAPSTPWSPPRR 231
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTPHEG 222
+SP YSP++P +SP Y+PS+P ASPDYSPS SP SP T P
Sbjct: 232 ASSPDYSPSTPPRRAASPNYTPSTPPRRAASPDYSPS---SPPRRAASPEYTQLSPPRRA 288
Query: 221 DKKD 210
D
Sbjct: 289 ASPD 292
Score = 78.2 bits (191), Expect = 5e-13
Identities = 50/123 (40%), Positives = 69/123 (56%), Gaps = 9/123 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPT---SPSYGPTSPSYNPQS-AKYSPSIAYSPSNARLSPASP-Y 426
Y+P++P SP ++P+ SPS SP Y+P + + + S YSPS ASP Y
Sbjct: 147 YTPSTPWRRAASPDHAPSPPWSPSRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDY 206
Query: 425 SPTSPNYSPTSPSYSPTSPSYSP---SSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYS 258
+P++P SP Y+P++P P SSP YSPS+P ASP+Y+PS P YS
Sbjct: 207 TPSTPWRRAASPDYAPSTPWSPPRRASSPDYSPSTPPRRAASPNYTPSTPPRRAASPDYS 266
Query: 257 PSS 249
PSS
Sbjct: 267 PSS 269
Score = 60.5 bits (145), Expect = 1e-07
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSP++P SP+Y+P++P SP Y+P S P A SP +LSP P SP
Sbjct: 237 YSPSTPPRRAASPNYTPSTPPRRAASPDYSPSSP---PRRAASPEYTQLSP--PRRAASP 291
Query: 410 NYSPTSPSYSPT-SPSYSPSSPTYSPSSPY-SSGASPDYSPSA 288
+Y+P++P SP S + S +SP + PY SG+S S A
Sbjct: 292 DYNPSTPPPSPVPSDAGSRTSPPWRRHHPYLRSGSSAACSSRA 334
Score = 55.8 bits (133), Expect = 2e-06
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Frame = -3
Query: 518 TSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYS 339
+S SY SA + ++ + A P P P + SP Y+P++P +SP Y+
Sbjct: 91 SSSSYASCSASADDAFYWTCFCGPMVMAPP--PPPPPRTAASPEYTPSTPWRRAASPDYT 148
Query: 338 PSSPYSSGASPDYSPSAGYSPT----LPGYSPSS 249
PS+P+ ASPD++PS +SP+ P YSPS+
Sbjct: 149 PSTPWRRAASPDHAPSPPWSPSRRAASPDYSPST 182
[208][TOP]
>UniRef100_UPI000069ED41 UPI000069ED41 related cluster n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI000069ED41
Length = 403
Score = 92.8 bits (229), Expect = 2e-17
Identities = 58/130 (44%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA-SPYSPT 417
YSP GYSP YSP Y P Y+P + YSP YSP + SP S YSP
Sbjct: 188 YSPLQSGYSPLQSGYSPLQSVYSPLQSGYSPLQSVYSPLQSGYSPLQSGYSPLQSVYSPL 247
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPS----SPYSSGASP---DYSP-SAGYSPTLPGY 261
YSP YSP YSP YSP SP SG SP YSP +GYSP GY
Sbjct: 248 QSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGY 307
Query: 260 SPSSTGQYTP 231
SP +G Y+P
Sbjct: 308 SPLQSG-YSP 316
Score = 92.0 bits (227), Expect = 3e-17
Identities = 58/130 (44%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA-SPYSPT 417
YSP GYSP YSP Y P Y+P + YSP YSP + SP S YSP
Sbjct: 230 YSPLQSGYSPLQSVYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPL 289
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPS----SPYSSGASP---DYSP-SAGYSPTLPGY 261
YSP YSP YSP YSP SP SG SP YSP +GYSP GY
Sbjct: 290 QSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSVYSPLQSGYSPLQSGY 349
Query: 260 SPSSTGQYTP 231
SP +G Y+P
Sbjct: 350 SPLQSG-YSP 358
Score = 91.7 bits (226), Expect = 4e-17
Identities = 58/130 (44%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP-ASPYSPT 417
YSP+ GYSP YSP Y P Y+P + YSP YSP + SP S YSP
Sbjct: 174 YSPSQSGYSPLQLVYSPLQSGYSPLQSGYSPLQSVYSPLQSGYSPLQSVYSPLQSGYSPL 233
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGASP---DYSP-SAGYSPTLPGY 261
YSP YSP YSP YSP SP SG SP YSP +GYSP GY
Sbjct: 234 QSGYSPLQSVYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGY 293
Query: 260 SPSSTGQYTP 231
SP +G Y+P
Sbjct: 294 SPLQSG-YSP 302
Score = 91.7 bits (226), Expect = 4e-17
Identities = 58/130 (44%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA-SPYSPT 417
YSP GYSP YSP Y P Y+P + YSP YSP + SP S YSP
Sbjct: 195 YSPLQSGYSPLQSVYSPLQSGYSPLQSVYSPLQSGYSPLQSGYSPLQSVYSPLQSGYSPL 254
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPS----SPYSSGASP---DYSP-SAGYSPTLPGY 261
YSP YSP YSP YSP SP SG SP YSP +GYSP GY
Sbjct: 255 QSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGY 314
Query: 260 SPSSTGQYTP 231
SP +G Y+P
Sbjct: 315 SPLQSG-YSP 323
Score = 90.5 bits (223), Expect = 9e-17
Identities = 53/123 (43%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA-SPYSPT 417
YSP GYSP YSP Y P Y+P + YSP YSP + SP S YSP
Sbjct: 209 YSPLQSGYSPLQSVYSPLQSGYSPLQSGYSPLQSVYSPLQSGYSPLQSGYSPLQSGYSPL 268
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQ 240
YSP YSP YSP YSP S YSP +GYSP GYSP +G
Sbjct: 269 QSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSG- 327
Query: 239 YTP 231
Y+P
Sbjct: 328 YSP 330
Score = 90.1 bits (222), Expect = 1e-16
Identities = 57/130 (43%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA-SPYSPT 417
YSP GYSP YSP Y P Y+P + YSP + YSP + SP S YSP+
Sbjct: 104 YSPLQSGYSPLQSGYSPLQSVYSPLQSVYSPLQSGYSPLQLVYSPLQSGYSPLQSVYSPS 163
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGASP---DYSP-SAGYSPTLPGY 261
YSP YSP+ YSP YSP SP SG SP YSP +GYSP Y
Sbjct: 164 QSGYSPLQSVYSPSQSGYSPLQLVYSPLQSGYSPLQSGYSPLQSVYSPLQSGYSPLQSVY 223
Query: 260 SPSSTGQYTP 231
SP +G Y+P
Sbjct: 224 SPLQSG-YSP 232
Score = 87.4 bits (215), Expect = 8e-16
Identities = 54/123 (43%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA-SPYSPT 417
YSP GYSP YSP Y P Y+P + YSP YSP + SP S YSP
Sbjct: 76 YSPLQSGYSPLQSVYSPLQSVYSPLQSGYSPLQSGYSPLQSGYSPLQSVYSPLQSVYSPL 135
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
YSP YSP YSP YSPS S YSPS +GYSP YSP +G
Sbjct: 136 QSGYSPLQLVYSPLQSGYSPLQSVYSPSQSGYSPLQSVYSPSQSGYSPLQLVYSPLQSG- 194
Query: 239 YTP 231
Y+P
Sbjct: 195 YSP 197
Score = 86.7 bits (213), Expect = 1e-15
Identities = 54/123 (43%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP-ASPYSPT 417
YSP GYSP YSP Y P Y+P + YSP YSP + SP S YSP
Sbjct: 62 YSPLQSGYSPLQLVYSPLQSGYSPLQSVYSPLQSVYSPLQSGYSPLQSGYSPLQSGYSPL 121
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQ 240
YSP YSP YSP YSP S YSPS +GYSP YSPS +G
Sbjct: 122 QSVYSPLQSVYSPLQSGYSPLQLVYSPLQSGYSPLQSVYSPSQSGYSPLQSVYSPSQSG- 180
Query: 239 YTP 231
Y+P
Sbjct: 181 YSP 183
Score = 85.5 bits (210), Expect = 3e-15
Identities = 57/130 (43%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSP-ASPYSPT 417
YSP YSP YSP Y P Y+P YSP YSP + SP S YSP
Sbjct: 41 YSPLQSVYSPLQSVYSPLQLVYSPLQSGYSPLQLVYSPLQSGYSPLQSVYSPLQSVYSPL 100
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGASP---DYSP-SAGYSPTLPGY 261
YSP YSP YSP YSP SP SG SP YSP +GYSP Y
Sbjct: 101 QSGYSPLQSGYSPLQSGYSPLQSVYSPLQSVYSPLQSGYSPLQLVYSPLQSGYSPLQSVY 160
Query: 260 SPSSTGQYTP 231
SPS +G Y+P
Sbjct: 161 SPSQSG-YSP 169
Score = 74.7 bits (182), Expect = 5e-12
Identities = 49/120 (40%), Positives = 52/120 (43%), Gaps = 7/120 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA-SPYSPT 417
YSP GYSP YSP Y P Y+P + YSP YSP + SP S YSP
Sbjct: 272 YSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPL 331
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSP-SSPYSS----GASPDYSPSAGYSPTLPGYSPS 252
YSP YSP YSP YSP S YS G D P PT P PS
Sbjct: 332 QSVYSPLQSGYSPLQSGYSPLQSGYSPLQSSYSQAQVCGCPSDLLPCPFPPPTPPIPLPS 391
Score = 73.6 bits (179), Expect = 1e-11
Identities = 44/113 (38%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA-SPYSPT 417
YSP GYSP YSP Y P Y+P + YSP YSP + SP S YSP
Sbjct: 265 YSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPL 324
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
YSP YSP YSP YSP +GYSP YS
Sbjct: 325 QSGYSPLQSVYSPLQSGYSPLQSGYSPL-------------QSGYSPLQSSYS 364
Score = 69.7 bits (169), Expect = 2e-10
Identities = 43/111 (38%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPA-SPYSPT 417
YSP GYSP YSP Y P Y+P + YSP YSP + SP S YSP
Sbjct: 286 YSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSVYSPLQSGYSPL 345
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSS----PYSSGASPDYSPSAGYSP 276
YSP YSP SYS + PS P+ P PS SP
Sbjct: 346 QSGYSPLQSGYSPLQSSYSQAQVCGCPSDLLPCPFPPPTPPIPLPSPPISP 396
[209][TOP]
>UniRef100_Q8MX30 DNA-directed RNA polymerase (Fragment) n=1 Tax=Naegleria gruberi
RepID=Q8MX30_NAEGR
Length = 1590
Score = 92.8 bits (229), Expect = 2e-17
Identities = 53/91 (58%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Frame = -3
Query: 566 SPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPNYSPTSP 390
SP + ++SP + S PTSP + YSPS SP N SP SP YSP+SPNYSPTSP
Sbjct: 1510 SPYNSAFSPVASS--PTSPGHQ---GGYSPS---SPGN--YSPTSPAYSPSSPNYSPTSP 1559
Query: 389 SYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 297
+YSPTSP+YSP+SP YSP+SP S SP YS
Sbjct: 1560 AYSPTSPNYSPTSPAYSPTSPNYSPTSPAYS 1590
Score = 91.3 bits (225), Expect = 5e-17
Identities = 52/98 (53%), Positives = 63/98 (64%), Gaps = 6/98 (6%)
Frame = -3
Query: 524 GPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN----YSPTSP-SYSPTSPSYS 360
G +P S +Y + SP N+ SP + SPTSP YSP+SP +YSPTSP+YS
Sbjct: 1490 GAMTPLGRTPSPEYQGGFSPSPYNSAFSPVAS-SPTSPGHQGGYSPSSPGNYSPTSPAYS 1548
Query: 359 PSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
PSSP YSP+SP S SP+YSP S YSPT P YSP+S
Sbjct: 1549 PSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSPNYSPTS 1586
Score = 83.6 bits (205), Expect = 1e-14
Identities = 42/70 (60%), Positives = 48/70 (68%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPTSP YSP+SP+YSPTSP+Y PTSP+Y+P SPA YSPTSP
Sbjct: 1540 YSPTSPAYSPSSPNYSPTSPAYSPTSPNYSP-----------------TSPA--YSPTSP 1580
Query: 410 NYSPTSPSYS 381
NYSPTSP+YS
Sbjct: 1581 NYSPTSPAYS 1590
[210][TOP]
>UniRef100_UPI0001792AA2 PREDICTED: hypothetical protein n=1 Tax=Acyrthosiphon pisum
RepID=UPI0001792AA2
Length = 649
Score = 91.7 bits (226), Expect = 4e-17
Identities = 53/120 (44%), Positives = 68/120 (56%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
Y +SP Y +S SY +SPSYG +S SY S Y S SPS SP+ Y +SP
Sbjct: 425 YGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGS---SPSYGGSSPS--YGGSSP 479
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 231
+Y +SPSY +S SY SSP+Y SSP G+SP Y S+ Y+ P YS SS+ +P
Sbjct: 480 SYGGSSPSYGGSSSSYGGSSPSYGGSSPSYGGSSPSYGSSSLYAGNSPSYSGSSSSYGSP 539
Score = 84.7 bits (208), Expect = 5e-15
Identities = 57/139 (41%), Positives = 71/139 (51%), Gaps = 9/139 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSP-----ASPY 426
Y +S Y +S SY +SPSYG +SPSY S Y S SPS SP + Y
Sbjct: 369 YGGSSSSYGGSSSSYGSSSPSYGGSSPSYGGSSPSYGGS---SPSYGGNSPSYGGSSHSY 425
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY---SPS-AGYSPTLPGYS 258
+SP+Y +S SY +SPSY SS +Y SSP G+SP Y SPS G SP+ G S
Sbjct: 426 GGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSS 485
Query: 257 PSSTGQYTPHEGDKKDKTG 201
PS G + + G G
Sbjct: 486 PSYGGSSSSYGGSSPSYGG 504
Score = 81.3 bits (199), Expect = 5e-14
Identities = 58/142 (40%), Positives = 70/142 (49%), Gaps = 26/142 (18%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPASP----- 429
Y +SP Y +SPSY +SPSYG SPSY S Y S +Y S+ +SP
Sbjct: 390 YGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGS 449
Query: 428 ---YSPTSPNYSPTSPSYSPTSPSYSPSSP---TYSP-----------SSPYSSGASPDY 300
Y +SP+Y +SPSY +SPSY SSP SP SSP G+SP Y
Sbjct: 450 SHSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSSSYGGSSPSYGGSSPSY 509
Query: 299 ---SPSAGYSPTLPGYSPSSTG 243
SPS G S G SPS +G
Sbjct: 510 GGSSPSYGSSSLYAGNSPSYSG 531
Score = 80.1 bits (196), Expect = 1e-13
Identities = 61/158 (38%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-AYSPSNARLSPAS-PYSPT 417
Y +SP Y +SPSY +SPSYG +SPSY S Y S +Y S+ +S Y +
Sbjct: 383 YGSSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSYGGS 442
Query: 416 SPNYSPTSPSYSPTSPSYSPSSP---TYSP----SSPYSSGASPDYSPSA----GYSPTL 270
SP+Y +S SY +SPSY SSP SP SSP G+SP Y S+ G SP+
Sbjct: 443 SPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSSSYGGSSPSY 502
Query: 269 PGYSPSSTGQYTPHEGDKKDKTGKK---DASKDDKGNP 165
G SPS G +P G G S G+P
Sbjct: 503 GGSSPSYGGS-SPSYGSSSLYAGNSPSYSGSSSSYGSP 539
Score = 77.8 bits (190), Expect = 6e-13
Identities = 52/131 (39%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYS 402
+SP + S SY +S SYG +S SY S Y S SPS SP+ Y +SP+Y
Sbjct: 358 SSPSFGGGSSSYGGSSSSYGGSSSSYGSSSPSYGGS---SPSYGGSSPS--YGGSSPSYG 412
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA----GYSPTLPGYSPSSTGQYT 234
SPSY +S SY SSP+Y SS G+SP Y S+ G SP+ G SPS G
Sbjct: 413 GNSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSP 472
Query: 233 PHEGDKKDKTG 201
+ G G
Sbjct: 473 SYGGSSPSYGG 483
Score = 73.2 bits (178), Expect = 1e-11
Identities = 57/133 (42%), Positives = 69/133 (51%), Gaps = 10/133 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
Y +SP Y +SPSY +S SYG +SPSY S Y S SPS +S Y+ SP
Sbjct: 474 YGGSSPSYGGSSPSYGGSSSSYGGSSPSYGGSSPSYGGS---SPS---YGSSSLYAGNSP 527
Query: 410 NYSPTSPSY---SPTSPSYSPSSPTYSPSS---PYSSGASPDYSPSA-GYSPTLPGYS-- 258
+YS +S SY SP PSY SP S SS PYSS SPS+ SP G S
Sbjct: 528 SYSGSSSSYGSPSPYKPSYGSPSPYKSSSSYKAPYSSSGPSFESPSSYKLSPYSGGSSYE 587
Query: 257 -PSSTGQYTPHEG 222
SS +Y+ +EG
Sbjct: 588 GSSSPYKYSSYEG 600
Score = 71.2 bits (173), Expect = 6e-11
Identities = 56/141 (39%), Positives = 69/141 (48%), Gaps = 11/141 (7%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPT-SPSYGPTSP------SYNPQSAKYSPSIAYSPSNARLSPAS 432
Y P S YS S SY P+ S Y P+SP SY S+ SP YS S + +S
Sbjct: 309 YLPQSSLYSGGS-SYKPSPSAHYKPSSPFDAFASSYGQSSSYSSPPQKYSSSPSFGGGSS 367
Query: 431 PYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY---SPS-AGYSPTLPG 264
Y +S +Y +S SY +SPSY SSP+Y SSP G+SP Y SPS G S + G
Sbjct: 368 SYGGSSSSYGGSSSSYGSSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSYGG 427
Query: 263 YSPSSTGQYTPHEGDKKDKTG 201
SPS G + G G
Sbjct: 428 SSPSYGGSSHSYGGSSPSYGG 448
Score = 70.1 bits (170), Expect = 1e-10
Identities = 54/148 (36%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSI-------AYSPSNARLSPAS 432
Y +SP Y +S SY +SPSYG +SPSY S Y S +YS S++ S
Sbjct: 481 YGGSSPSYGGSSSSYGGSSPSYGGSSPSYGGSSPSYGSSSLYAGNSPSYSGSSSSYGSPS 540
Query: 431 PYSPTSPNYSPTSPSYSPTSPSYSPSSPTY-SPS----SPYSSGASPDYSPSAGYSPTLP 267
PY P+ + SP S S +P YS S P++ SPS SPYS G+S + S S +
Sbjct: 541 PYKPSYGSPSPYKSSSSYKAP-YSSSGPSFESPSSYKLSPYSGGSSYEGSSSPYKYSSYE 599
Query: 266 GYSPSSTGQYTPHEGDKKDKTGKKDASK 183
G S S T G K T S+
Sbjct: 600 GSSSSYKSSPTYSSGSFKPITSSYSQSE 627
Score = 62.0 bits (149), Expect = 3e-08
Identities = 58/182 (31%), Positives = 73/182 (40%), Gaps = 52/182 (28%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY----------SPTSPSYGPTSP-----SYN-----PQSAKYSPSI 471
YSP+S Y TS Y SP+ PS P+S SYN PQS+ YS
Sbjct: 263 YSPSS--YPSTSSEYYAAQQSSSYGSPSKPSSYPSSVYPSDNSYNKFKYLPQSSLYSGGS 320
Query: 470 AYSPSNARLSPASPYSPTSP--------------------------------NYSPTSPS 387
+Y PS P++ Y P+SP +Y +S S
Sbjct: 321 SYKPS-----PSAHYKPSSPFDAFASSYGQSSSYSSPPQKYSSSPSFGGGSSSYGGSSSS 375
Query: 386 YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDK 207
Y +S SY SSP+Y SSP G+SP Y G SP+ G SPS G + G
Sbjct: 376 YGGSSSSYGSSSPSYGGSSPSYGGSSPSY---GGSSPSYGGNSPSYGGSSHSYGGSSPSY 432
Query: 206 TG 201
G
Sbjct: 433 GG 434
Score = 56.2 bits (134), Expect = 2e-06
Identities = 51/128 (39%), Positives = 61/128 (47%), Gaps = 14/128 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY---SPTSPSYGPTSP-----SYNPQSAKYSPSIAYSPSNARLSPA 435
Y+ SP YS +S SY SP PSYG SP SY + PS SPS+ +LSP
Sbjct: 522 YAGNSPSYSGSSSSYGSPSPYKPSYGSPSPYKSSSSYKAPYSSSGPSFE-SPSSYKLSPY 580
Query: 434 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA----SPDYSPSAGYSPTLP 267
S S + SP S SY SS +Y S YSSG+ + YS S SP+
Sbjct: 581 SGGSSYEGSSSPYKYS------SYEGSSSSYKSSPTYSSGSFKPITSSYSQSEYESPSSS 634
Query: 266 GYS--PSS 249
YS PSS
Sbjct: 635 LYSSKPSS 642
[211][TOP]
>UniRef100_Q4UCP5 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4UCP5_THEAN
Length = 1678
Score = 91.3 bits (225), Expect = 5e-17
Identities = 58/109 (53%), Positives = 71/109 (65%), Gaps = 8/109 (7%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPS--YGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN- 408
SP YSPTSP SPTSP+ PTSP Y+P + SP+ A SP++ SPA YSPTSPN
Sbjct: 1572 SPAYSPTSPM-SPTSPTSALSPTSPVYSPAYSPTSPTSAMSPTSPVYSPA--YSPTSPNL 1628
Query: 407 -YSPTSP----SYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSP 276
Y+PTSP +YSPT+P+Y YSP+SP S SP YSP+ +SP
Sbjct: 1629 GYAPTSPVYSPAYSPTTPNYG-----YSPTSPLSP-TSPAYSPTDPFSP 1671
Score = 89.0 bits (219), Expect = 3e-16
Identities = 70/138 (50%), Positives = 81/138 (58%), Gaps = 17/138 (12%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTS---PSYNPQSAKYSPSIAYSPSNARLSPASPYSPT 417
SPTSP SPTSP SPTSP PTS P Y+P + SP SP++A LSP SP
Sbjct: 1544 SPTSP-MSPTSPM-SPTSPM-SPTSAISPVYSPAYSPTSPMSPTSPTSA-LSPTSPVY-- 1597
Query: 416 SPNYSPTSP--SYSPTSPSYSPS-SPT-----YSPSSP-YSSGASP-----DYSPSAGYS 279
SP YSPTSP + SPTSP YSP+ SPT Y+P+SP YS SP YSP++ S
Sbjct: 1598 SPAYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPTSPVYSPAYSPTTPNYGYSPTSPLS 1657
Query: 278 PTLPGYSPSSTGQYTPHE 225
PT P YSP+ P E
Sbjct: 1658 PTSPAYSPTDPFSPNPFE 1675
Score = 56.2 bits (134), Expect = 2e-06
Identities = 50/124 (40%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPT--SPSYNPQSAKYSPSIAYSPSNARL-----SPASPYSP 420
SP SP SPS T + P SP+Y I PS L + +SP
Sbjct: 1483 SPDSSPLSPSTPATKQTMSPMAFSPTYTSLMMSPVGGIGMGPSTPGLMVDTYALGGSFSP 1542
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQ 240
TSP TSP SPTSP SP+SP SP+S S SP YSP++ SPT P + S T
Sbjct: 1543 TSP----TSPM-SPTSPM-SPTSPM-SPTSAISPVYSPAYSPTSPMSPTSPTSALSPTSP 1595
Query: 239 -YTP 231
Y+P
Sbjct: 1596 VYSP 1599
[212][TOP]
>UniRef100_UPI00004C0623 PREDICTED: similar to zinc finger protein 239 (predicted) isoform 1
n=1 Tax=Canis lupus familiaris RepID=UPI00004C0623
Length = 554
Score = 90.5 bits (223), Expect = 9e-17
Identities = 48/124 (38%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNA-RLSPASP-YSPT 417
+ P SPG+ SP + P SP + SP + P S +++P S S + P SP Y P
Sbjct: 65 FEPQSPGFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPDSDSQSPEFEPQSPRYEPQ 124
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
SP Y P SP Y P SP Y P SP Y P SP SP Y P +P SP Q
Sbjct: 125 SPGYEPRSPGYEPKSPGYEPKSPGYEPRSPGYESQSPGYEPQ---NPEFKTQSPEFEAQS 181
Query: 236 TPHE 225
+ E
Sbjct: 182 SKFE 185
Score = 82.4 bits (202), Expect = 2e-14
Identities = 40/103 (38%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPT 417
+ SPG+ P SP ++P SP SP + PQS +Y P S Y P + P SP Y P
Sbjct: 86 FESRSPGFVPPSPEFAPRSPDSDSQSPEFEPQSPRYEPQSPGYEPRSPGYEPKSPGYEPK 145
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA 288
SP Y P SP Y SP Y P +P + SP S + A
Sbjct: 146 SPGYEPRSPGYESQSPGYEPQNPEFKTQSPEFEAQSSKFEEGA 188
Score = 79.0 bits (193), Expect = 3e-13
Identities = 43/137 (31%), Positives = 58/137 (42%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNY 405
P SPG+ P SP + SP + P SP + +S + P P+ ++P SP+
Sbjct: 60 PQSPGFEPQSPGFESQSPRFEPESPGFESRSPGFVP------------PSPEFAPRSPDS 107
Query: 404 SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTPHE 225
SP + P SP Y P SP Y P SP GY P PGY P S G
Sbjct: 108 DSQSPEFEPQSPRYEPQSPGYEPRSP-------------GYEPKSPGYEPKSPGYEPRSP 154
Query: 224 GDKKDKTGKKDASKDDK 174
G + G + + + K
Sbjct: 155 GYESQSPGYEPQNPEFK 171
[213][TOP]
>UniRef100_B4I9T9 GM19220 n=1 Tax=Drosophila sechellia RepID=B4I9T9_DROSE
Length = 506
Score = 89.0 bits (219), Expect = 3e-16
Identities = 63/139 (45%), Positives = 84/139 (60%), Gaps = 20/139 (14%)
Frame = -3
Query: 590 YSPTSPGYS-PTSPSYS-PTSPSY-GPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS 423
YSP +P YS P S SYS P +PSY P +PSY SA +PS + S++ +PA+P YS
Sbjct: 82 YSPAAPSYSAPASSSYSAPAAPSYSAPAAPSY---SAPAAPSYSAPASSSYSAPAAPSYS 138
Query: 422 -PTSPNYS-PTSPSYS-PTSPSYS---------PSSPTYS-PSSPYSSGASPDYSPSAGY 282
P +P+YS P +PSYS P +PSYS P++P+YS P++PYS+ A+P YS A
Sbjct: 139 APAAPSYSAPAAPSYSAPAAPSYSAPAAQSYSAPAAPSYSAPAAPYSAPAAPSYSAPAAP 198
Query: 281 S---PTLPGYSPSSTGQYT 234
S P P YS T Y+
Sbjct: 199 SYSAPAAPSYSAQKTSSYS 217
Score = 83.2 bits (204), Expect = 1e-14
Identities = 59/139 (42%), Positives = 81/139 (58%), Gaps = 20/139 (14%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYN-PQSAKYSPSIAYSPSNARLSPASPYS- 423
+P +P YS P +PSYS P +PSY P +PSY+ P + YS A S S +PA+PYS
Sbjct: 131 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAQSYSAPAAPSYS----APAAPYSA 186
Query: 422 PTSPNYS-PTSPSYS-PTSPSYS---------PSSPTY----SPSSPYSSGASPDYSPSA 288
P +P+YS P +PSYS P +PSYS P++P+Y +P+S YS+ A P YS A
Sbjct: 187 PAAPSYSAPAAPSYSAPAAPSYSAQKTSSYSAPAAPSYPAPAAPASSYSAPAGPSYSAPA 246
Query: 287 GYSPTLPGYSPSSTGQYTP 231
S + P YS ++ P
Sbjct: 247 APSYSAPSYSAPASSYSAP 265
Score = 71.6 bits (174), Expect = 4e-11
Identities = 61/140 (43%), Positives = 80/140 (57%), Gaps = 25/140 (17%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYSPTSPSYGPTSPSYN-PQSAKYSPSIA--YSPSNARL--SPASPY 426
+P P YS P +PSYS +PSY + SY+ P+++ YS A YS A L S ASP
Sbjct: 236 APAGPSYSAPAAPSYS--APSYSAPASSYSAPKASAYSAPAAPSYSAPAAPLYSSSASPS 293
Query: 425 --SPTSPNYS-PTSPSYS---------PTSPSYS-PSSPTYS--PSSPYSSGASPDYSPS 291
SP S +YS P +P+YS P +PSYS P++P+YS SS YS+ A+P YS
Sbjct: 294 YSSPASSSYSAPAAPTYSVPKAQSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAP 353
Query: 290 AGYS---PTLPGYS-PSSTG 243
A S P P YS P+S+G
Sbjct: 354 ASQSYSAPAAPSYSAPASSG 373
Score = 69.3 bits (168), Expect = 2e-10
Identities = 51/125 (40%), Positives = 70/125 (56%), Gaps = 7/125 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTS 414
+P +P +P +PSYS P +PSY P +PSY+ Q +YS A PA P +P S
Sbjct: 179 APAAPYSAPAAPSYSAPAAPSYSAPAAPSYSAQKTS-----SYSAPAAPSYPA-PAAPAS 232
Query: 413 PNYSPTSPSYS-PTSPSYSPSSPTYS-PSSPYSSGASPDYSPSAGYS---PTLPGYSPSS 249
+P PSYS P +PSY S+P+YS P+S YS+ + YS A S P P YS S+
Sbjct: 233 SYSAPAGPSYSAPAAPSY--SAPSYSAPASSYSAPKASAYSAPAAPSYSAPAAPLYSSSA 290
Query: 248 TGQYT 234
+ Y+
Sbjct: 291 SPSYS 295
Score = 67.8 bits (164), Expect = 6e-10
Identities = 58/143 (40%), Positives = 85/143 (59%), Gaps = 23/143 (16%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYSPT-SPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS-P 420
+P +P YS P +P YS + SPSY +SP+ + SA +P+ + + + +PA+P YS P
Sbjct: 272 APAAPSYSAPAAPLYSSSASPSY--SSPASSSYSAPAAPTYSVPKAQSYSAPAAPSYSAP 329
Query: 419 TSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYS-----------PSA 288
+P+YS P S SYS P +PSYS P+S +YS P++P YS+ AS YS P++
Sbjct: 330 AAPSYSAPASSSYSAPAAPSYSAPASQSYSAPAAPSYSAPASSGYSAARAYSAGSAAPAS 389
Query: 287 GYS--PTLPGYS-PSSTGQYTPH 228
GYS GYS P ++ Y+ H
Sbjct: 390 GYSAPKASSGYSAPKASSGYSAH 412
Score = 67.4 bits (163), Expect = 8e-10
Identities = 59/166 (35%), Positives = 83/166 (50%), Gaps = 48/166 (28%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS---------PTSPSY-----------GPTSPSYN-PQSAKYSPS 474
+P +P YS P +PSYS P +PSY P PSY+ P + YS
Sbjct: 194 APAAPSYSAPAAPSYSAQKTSSYSAPAAPSYPAPAAPASSYSAPAGPSYSAPAAPSYSAP 253
Query: 473 IAYSPSNARLSP-ASPYS-PTSPNYS-PTSPSYSPT-SPSYS---------PSSPTYS-- 339
+P+++ +P AS YS P +P+YS P +P YS + SPSYS P++PTYS
Sbjct: 254 SYSAPASSYSAPKASAYSAPAAPSYSAPAAPLYSSSASPSYSSPASSSYSAPAAPTYSVP 313
Query: 338 -------PSSP-YSSGASPDYSPSAGYS---PTLPGYSPSSTGQYT 234
P++P YS+ A+P YS A S P P YS ++ Y+
Sbjct: 314 KAQSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPASQSYS 359
Score = 60.1 bits (144), Expect = 1e-07
Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 18/121 (14%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSY---------GPTSPSYN-PQSAKYSPSIAYSPSNARL 444
+P +P YS P S SYS P +PSY P +PSY+ P S+ YS + AYS +A
Sbjct: 328 APAAPSYSAPASSSYSAPAAPSYSAPASQSYSAPAAPSYSAPASSGYSAARAYSAGSA-- 385
Query: 443 SPASPYS--PTSPNYS--PTSPSYSPTSPSYSPSSPTYS--PSSPYSSGASPDYSPSAGY 282
+PAS YS S YS S YS + S SP++ +YS SS SSG S S S+GY
Sbjct: 386 APASGYSAPKASSGYSAPKASSGYSAHASSGSPAASSYSAPASSSASSGYSAPASKSSGY 445
Query: 281 S 279
+
Sbjct: 446 A 446
Score = 59.3 bits (142), Expect = 2e-07
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 10/94 (10%)
Frame = -3
Query: 485 YSPSIAYSPSNARLSPASPY---SPTSPNYSPTSPSYS-PTSPSYS-PSSPTYS-PSSP- 327
Y+P + Y+ S + SPA +P +P YSP +PSYS P S SYS P++P+YS P++P
Sbjct: 54 YAPPVVYN-SQSSYSPAKDQGYPAPAAPVYSPAAPSYSAPASSSYSAPAAPSYSAPAAPS 112
Query: 326 YSSGASPDYSPSAGYS---PTLPGYSPSSTGQYT 234
YS+ A+P YS A S P P YS + Y+
Sbjct: 113 YSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYS 146
[214][TOP]
>UniRef100_Q0UCC9 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0UCC9_PHANO
Length = 351
Score = 88.2 bits (217), Expect = 4e-16
Identities = 54/125 (43%), Positives = 68/125 (54%), Gaps = 13/125 (10%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSPSYG----PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPT 417
TSP YSP +P ++P SPSY PT+P+Y P + + YSP+ L P SP Y+P
Sbjct: 137 TSPRYSPPTPHFAPRSPSYAPGLPPTTPTYRPTTPTFIDLTYYSPTPPILMPESPTYTPP 196
Query: 416 SPNYSPT-------SPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS-PSAGYSPTLPGY 261
SP Y P SP Y+PTSP SPTY SP AS S S Y+PT P +
Sbjct: 197 SPRYYPASFEINLLSPGYAPTSPGI--RSPTYGAPSPDLEPASSSLSLTSPTYTPTSPHF 254
Query: 260 SPSST 246
+P+ST
Sbjct: 255 TPTST 259
Score = 84.0 bits (206), Expect = 8e-15
Identities = 51/134 (38%), Positives = 66/134 (49%), Gaps = 16/134 (11%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKY----SPSIAYSPSNARLSPASP---- 429
P SPG PT+ +Y+P SP Y P +P + S YSP +P SP
Sbjct: 98 PISPGLRPTTSTYTPASPRYSPATPKIRSPRLTMLEDGATSPRYSPPTPHFAPRSPSYAP 157
Query: 428 -YSPTSPNYSPTSPS------YSPTSPSYSPSSPTYSPSSPYSSGASPDYS-PSAGYSPT 273
PT+P Y PT+P+ YSPT P P SPTY+P SP AS + + S GY+PT
Sbjct: 158 GLPPTTPTYRPTTPTFIDLTYYSPTPPILMPESPTYTPPSPRYYPASFEINLLSPGYAPT 217
Query: 272 LPGYSPSSTGQYTP 231
PG + G +P
Sbjct: 218 SPGIRSPTYGAPSP 231
Score = 82.8 bits (203), Expect = 2e-14
Identities = 51/134 (38%), Positives = 70/134 (52%), Gaps = 22/134 (16%)
Frame = -3
Query: 584 PTSPGYSPTSPS------YSPTSPSYGPTSPSYNPQSAKYSP--------SIAYSPSNAR 447
PT+P Y PT+P+ YSPT P P SP+Y P S +Y P S Y+P++
Sbjct: 161 PTTPTYRPTTPTFIDLTYYSPTPPILMPESPTYTPPSPRYYPASFEINLLSPGYAPTSPG 220
Query: 446 L------SPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-- 291
+ +P+ P S + S TSP+Y+PTSP ++P+S Y +SP S SPS
Sbjct: 221 IRSPTYGAPSPDLEPASSSLSLTSPTYTPTSPHFTPTSTPYVRTSPSFYRPSGSRSPSFY 280
Query: 290 AGYSPTLPGYSPSS 249
Y P P YSP+S
Sbjct: 281 RPYGPASPTYSPTS 294
Score = 81.6 bits (200), Expect = 4e-14
Identities = 58/141 (41%), Positives = 74/141 (52%), Gaps = 29/141 (20%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTS-------PSYGPTSPSYNPQSAKY-SPSIAYSPSNARLSPASP 429
P SP Y+P SP Y P S P Y PTSP +S Y +PS P+++ LS SP
Sbjct: 188 PESPTYTPPSPRYYPASFEINLLSPGYAPTSPGI--RSPTYGAPSPDLEPASSSLSLTSP 245
Query: 428 -YSPTSPNYSPTSPSYSPTSPS---------------YSPSSPTYSPSSPY--SSGASPD 303
Y+PTSP+++PTS Y TSPS Y P+SPTYSP+SP +S SP
Sbjct: 246 TYTPTSPHFTPTSTPYVRTSPSFYRPSGSRSPSFYRPYGPASPTYSPTSPVIPTSIGSPP 305
Query: 302 YSPSAG---YSPTLPGYSPSS 249
+ + G YSP P PS+
Sbjct: 306 INFTLGSPTYSPPSPSRLPSA 326
Score = 75.9 bits (185), Expect = 2e-12
Identities = 50/98 (51%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKY---SPSIAYSPSNARLSPA--SPY 426
Y SP P S S S TSP+Y PTSP + P S Y SPS Y PS +R SP+ PY
Sbjct: 226 YGAPSPDLEPASSSLSLTSPTYTPTSPHFTPTSTPYVRTSPSF-YRPSGSR-SPSFYRPY 283
Query: 425 SPTSPNYSPTSPSYSPTSPSYSP-----SSPTYSPSSP 327
P SP YSPTSP PTS P SPTYSP SP
Sbjct: 284 GPASPTYSPTSP-VIPTSIGSPPINFTLGSPTYSPPSP 320
[215][TOP]
>UniRef100_A9U3I4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9U3I4_PHYPA
Length = 291
Score = 87.8 bits (216), Expect = 6e-16
Identities = 59/121 (48%), Positives = 70/121 (57%), Gaps = 5/121 (4%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSPT G SP+SP+YS SP Y PT S +P + SPS + P + S SP +P+SP
Sbjct: 161 YSPTPSGSSPSSPTYS--SPPYSPTPSSSSPTTPS-SPSYSSPPYSPTPSDPSPSTPSSP 217
Query: 410 NYSPTSPSYSPTSPSYS---PSSPTYS--PSSPYSSGASPDYSPSAGYSPTLPGYSPSST 246
YS SP YSPT S PSSPTYS P SP SG+SP S YS P YSP+ +
Sbjct: 218 TYS--SPPYSPTPSGPSPPTPSSPTYSSPPYSPTPSGSSPTTPSSPSYSS--PPYSPTPS 273
Query: 245 G 243
G
Sbjct: 274 G 274
Score = 85.5 bits (210), Expect = 3e-15
Identities = 66/138 (47%), Positives = 81/138 (58%), Gaps = 19/138 (13%)
Frame = -3
Query: 587 SPTSP-GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
SPT+P G SP+SP+YS SP Y PT +P S YS S YSP+ S +SP +P+SP
Sbjct: 142 SPTAPSGPSPSSPTYS--SPPYSPTPSGSSPSSPTYS-SPPYSPTP---SSSSPTTPSSP 195
Query: 410 NYSPTSPSYSPT----SPSYSPSSPTYS--PSSPYSSG-----------ASPDYSPS-AG 285
+YS SP YSPT SPS +PSSPTYS P SP SG +SP YSP+ +G
Sbjct: 196 SYS--SPPYSPTPSDPSPS-TPSSPTYSSPPYSPTPSGPSPPTPSSPTYSSPPYSPTPSG 252
Query: 284 YSPTLPGYSPSSTGQYTP 231
SPT P S+ Y+P
Sbjct: 253 SSPTTPSSPSYSSPPYSP 270
Score = 84.7 bits (208), Expect = 5e-15
Identities = 64/143 (44%), Positives = 79/143 (55%), Gaps = 15/143 (10%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT-- 417
SP +P +SP YSP +PS G P +PS + S YSP+ PS++ SP +P SPT
Sbjct: 77 SPVTPTPVYSSPPYSPGTPSGGSPVTPSPSYSSPPYSPT----PSSS--SPTTPSSPTYS 130
Query: 416 SPNYSPTSPSYSPTSPS-YSPSSPTYS--PSSPYSSGASPD--------YSPS-AGYSPT 273
SP YSP S SPT+PS SPSSPTYS P SP SG+SP YSP+ + SPT
Sbjct: 131 SPPYSPAPSSPSPTAPSGPSPSSPTYSSPPYSPTPSGSSPSSPTYSSPPYSPTPSSSSPT 190
Query: 272 LPGYSPSSTGQYTPHEGDKKDKT 204
P S+ Y+P D T
Sbjct: 191 TPSSPSYSSPPYSPTPSDPSPST 213
Score = 84.3 bits (207), Expect = 6e-15
Identities = 64/143 (44%), Positives = 74/143 (51%), Gaps = 24/143 (16%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPY--SPTS 414
SP +P S +SP YSPT S PT+PS S YS S YSP+ + SP +P SP+S
Sbjct: 99 SPVTPSPSYSSPPYSPTPSSSSPTTPS----SPTYS-SPPYSPAPSSPSPTAPSGPSPSS 153
Query: 413 PNYSPTSPSYSPTSPSYSPSSPTYS--PSSPYSSGASP------------------DYSP 294
P YS SP YSPT SPSSPTYS P SP S +SP D SP
Sbjct: 154 PTYS--SPPYSPTPSGSSPSSPTYSSPPYSPTPSSSSPTTPSSPSYSSPPYSPTPSDPSP 211
Query: 293 SAGYSPTL--PGYSPSSTGQYTP 231
S SPT P YSP+ +G P
Sbjct: 212 STPSSPTYSSPPYSPTPSGPSPP 234
Score = 75.1 bits (183), Expect = 4e-12
Identities = 54/106 (50%), Positives = 62/106 (58%), Gaps = 5/106 (4%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT--S 414
+P+SP YS SP YSPT P++PS S YS S YSP+ + SP +P SPT S
Sbjct: 191 TPSSPSYS--SPPYSPTPSDPSPSTPS----SPTYS-SPPYSPTPSGPSPPTPSSPTYSS 243
Query: 413 PNYSPTSPSYSPTSPSY-SPSSPTYS--PSSPYSSGASPDYSPSAG 285
P YSPT SPT+PS S SSP YS PS SG SP SP AG
Sbjct: 244 PPYSPTPSGSSPTTPSSPSYSSPPYSPTPSGGSPSGGSPSGSPPAG 289
Score = 72.0 bits (175), Expect = 3e-11
Identities = 54/125 (43%), Positives = 72/125 (57%), Gaps = 6/125 (4%)
Frame = -3
Query: 587 SPTSPGYSPTSPSY-SPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
+P +P YSP S SP +P+ +SP Y+P + + SPS + + PYSPT
Sbjct: 62 TPYTPSYSPPVASDPSPVTPTPVYSSPPYSPGTPSGGSPVTPSPSYS----SPPYSPTPS 117
Query: 410 NYSPTSPSYSPT--SPSYSPSSPTYSPSSPYSSG---ASPDYSPSAGYSPTLPGYSPSST 246
+ SPT+PS SPT SP YSP+ + SP++P SG +SP YS S YSPT G SPSS
Sbjct: 118 SSSPTTPS-SPTYSSPPYSPAPSSPSPTAP--SGPSPSSPTYS-SPPYSPTPSGSSPSSP 173
Query: 245 GQYTP 231
+P
Sbjct: 174 TYSSP 178
[216][TOP]
>UniRef100_P13983 Extensin n=1 Tax=Nicotiana tabacum RepID=EXTN_TOBAC
Length = 620
Score = 87.8 bits (216), Expect = 6e-16
Identities = 52/122 (42%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Frame = -3
Query: 590 YSPTSPGYSPT-----SPSYSPTSPSYGPTSPSYNPQSAKYSP---SIAYSPSNARLSPA 435
YSP P YSP+ +P++SP P+Y P P+Y+P Y P S YSP SP
Sbjct: 298 YSPPPPAYSPSPPPTPTPTFSPPPPAYSPP-PTYSPPPPTYLPLPSSPIYSPPPPVYSPP 356
Query: 434 SP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGY 261
P YSP P Y P P SP PS+SP PTY S P SP YSP P Y
Sbjct: 357 PPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPPLPAPPTYSPPPPTY 416
Query: 260 SP 255
SP
Sbjct: 417 SP 418
Score = 84.7 bits (208), Expect = 5e-15
Identities = 52/124 (41%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYN---PQSAKYSPSI----AYSPSNARLSPAS 432
YSP P Y P P SP PS+ P P+Y P YSP + YSP SP
Sbjct: 361 YSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPPLPAPPTYSPPPPTYSPPP 420
Query: 431 PY----SPTSPNYSPTSPSYS-PTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLP 267
P P P YSP P+YS P P+YSP PTYSP P + P P YSP P
Sbjct: 421 PTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPP---PPPTYSPPPP 477
Query: 266 GYSP 255
YSP
Sbjct: 478 AYSP 481
Score = 84.3 bits (207), Expect = 6e-15
Identities = 59/147 (40%), Positives = 67/147 (45%), Gaps = 35/147 (23%)
Frame = -3
Query: 590 YSPTSPGYSPT---SPSYSPTSPSYGPTSPS--YNPQSAKYSPSI------AYSPSNARL 444
YSP P Y+ + SP+YSP P+Y P PS Y+P YSPS +SP
Sbjct: 265 YSPPPPAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPPTPTPTFSPPPPAY 324
Query: 443 SPASPYSPTSPNY--SPTSPSYS--------PTSPSYSPSSPTYSPSSPYSSGASPDYS- 297
SP YSP P Y P+SP YS P PSYSP PTY P P SS P +S
Sbjct: 325 SPPPTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSP 384
Query: 296 ----------PSAGYSPTLPG---YSP 255
P YSP LP YSP
Sbjct: 385 PPPTYEQSPPPPPAYSPPLPAPPTYSP 411
Score = 84.3 bits (207), Expect = 6e-15
Identities = 55/129 (42%), Positives = 64/129 (49%), Gaps = 9/129 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSP-SYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPA-SPYSPT 417
YSP P YSP P SYSP P+Y P P +P +SP + PA SP P
Sbjct: 346 YSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPPLPA 405
Query: 416 SPNYSPTSPSYSPTSPSYS---PSSPTYSPSSP-YSSGASPDYS-PSAGYSPTLPGYS-- 258
P YSP P+YSP P+Y+ P PTYSP P YS P YS P YSP P Y+
Sbjct: 406 PPTYSPPPPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQP 465
Query: 257 PSSTGQYTP 231
P Y+P
Sbjct: 466 PPPPPTYSP 474
Score = 76.3 bits (186), Expect = 2e-12
Identities = 51/128 (39%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
+ P+ + P SP P P+Y P P+Y QS + SP+ YSP SP P SP
Sbjct: 244 HQPSPLRHLPPSPRRQPQPPTYSPPPPAY-AQSPQPSPT--YSPPPPTYSPPPP----SP 296
Query: 410 NYSPTSPSYSPT-----SPSYSPSSPTYSPSSPYSSGASPDYSP---SAGYSPTLPGYSP 255
YSP P+YSP+ +P++SP P YSP YS P Y P S YSP P YSP
Sbjct: 297 IYSPPPPAYSPSPPPTPTPTFSPPPPAYSPPPTYSP-PPPTYLPLPSSPIYSPPPPVYSP 355
Query: 254 SSTGQYTP 231
Y+P
Sbjct: 356 PPPPSYSP 363
Score = 75.9 bits (185), Expect = 2e-12
Identities = 51/128 (39%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Frame = -3
Query: 590 YSPTSPGYS---PTSPSYSP---TSPSYGPTSPSYNPQSAKYS--PSI--AYSPSNARLS 441
+SP P Y P P+YSP P+Y P P+Y+P Y+ P + YSP S
Sbjct: 382 FSPPPPTYEQSPPPPPAYSPPLPAPPTYSPPPPTYSPPPPTYAQPPPLPPTYSPPPPAYS 441
Query: 440 PASP--YSPTSPNYSPTSPSYS---PTSPSYSPSSPTYSPSSPYSSGASPDYS-PSAGYS 279
P P YSP P YSP P+Y+ P P+YSP P YSP P SP YS P
Sbjct: 442 PPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPPP-----SPIYSPPPPQVQ 496
Query: 278 PTLPGYSP 255
P P +SP
Sbjct: 497 PLPPTFSP 504
Score = 72.8 bits (177), Expect = 2e-11
Identities = 55/144 (38%), Positives = 72/144 (50%), Gaps = 24/144 (16%)
Frame = -3
Query: 590 YSPTS-----PGYSPTSPSY-----SPTSPSYGPTSPSYN--PQSAKYSPSIAYSPSNAR 447
YSP+ P YSP P++ SP S + P P++ P + +++P + PS R
Sbjct: 192 YSPSPQVQPPPTYSPPPPTHVQPTPSPPSRGHQPQPPTHRHAPPTHRHAPP-THQPSPLR 250
Query: 446 LSPASPY-SPTSPNYSPTSPSYSPT---SPSYSPSSPTYS--PSSPYSSGASPDYSPS-- 291
P SP P P YSP P+Y+ + SP+YSP PTYS P SP S P YSPS
Sbjct: 251 HLPPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPP 310
Query: 290 ----AGYSPTLPGYSPSSTGQYTP 231
+SP P YSP T Y+P
Sbjct: 311 PTPTPTFSPPPPAYSPPPT--YSP 332
Score = 70.9 bits (172), Expect = 7e-11
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSP-SYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
P P YSP P+YSP P +Y P P+Y+P Y+ P+ + PA P SP
Sbjct: 428 PLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPPPSPI 487
Query: 407 YSPTSPSYSPTSPSYSPSSP--TYSPSSPYSSGASPDYSPSAGYSPTLPGYSP 255
YSP P P P++SP P + P P+ P +P+ G P+ P +SP
Sbjct: 488 YSPPPPQVQPLPPTFSPPPPRRIHLPPPPHRQPRPP--TPTYGQPPSPPTFSP 538
Score = 57.4 bits (137), Expect = 8e-07
Identities = 45/145 (31%), Positives = 61/145 (42%), Gaps = 27/145 (18%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS--YSPTSPSYGPTSPSYNP--------------QSAKYSPSIAYSP 459
YSP P YSP PS YSP P P P+++P Q +P+ P
Sbjct: 472 YSPPPPAYSPPPPSPIYSPPPPQVQPLPPTFSPPPPRRIHLPPPPHRQPRPPTPTYGQPP 531
Query: 458 SNARLSPASP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP------ 306
S SP P +SP P++ P +P+ + P PS PT+S P + P
Sbjct: 532 SPPTFSPPPPRQIHSPPPPHWQPRTPTPTYGQP---PSPPTFSAPPPRQIHSPPPPHRQP 588
Query: 305 -DYSPSAGYSPTLP-GYSPSSTGQY 237
+P+ G P+ P YSP S Y
Sbjct: 589 RPPTPTYGQPPSPPTTYSPPSPPPY 613
Score = 55.5 bits (132), Expect = 3e-06
Identities = 46/124 (37%), Positives = 56/124 (45%), Gaps = 18/124 (14%)
Frame = -3
Query: 584 PTSPGYSPTSP--SYSPTSPSYGP----------TSPSYN---PQSAKYSPSIAYSPSNA 450
P SP SP+ P SY PS+GP SPS+ P P + PS+
Sbjct: 108 PPSPVISPSHPPPSYGAPPPSHGPGHLPSHGQRPPSPSHGHAPPSGGHTPPRGQHPPSHR 167
Query: 449 RLSPASPYS-PTSPNYS--PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYS 279
R SP S + P P Y+ P +P YSP SP P PTYSP P +P PS G+
Sbjct: 168 RPSPPSRHGHPPPPTYAQPPPTPIYSP-SPQVQPP-PTYSPPPPTHVQPTPS-PPSRGHQ 224
Query: 278 PTLP 267
P P
Sbjct: 225 PQPP 228
Score = 54.7 bits (130), Expect = 5e-06
Identities = 39/115 (33%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Frame = -3
Query: 584 PTSPGYSPT-----SPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSP 420
P S G++P SPS+ P PSYG PS+ P SPS+ P+ ++P
Sbjct: 100 PPSRGFNPPPSPVISPSHPP--PSYGAPPPSHGPGHLPSHGQRPPSPSHGHAPPSGGHTP 157
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSP 255
+ P+ SP S P PTY+ P +P YSPS P P YSP
Sbjct: 158 PRGQHPPSHRRPSPPSRHGHPPPPTYAQPPP-----TPIYSPSPQVQPP-PTYSP 206
[217][TOP]
>UniRef100_B8BEN2 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8BEN2_ORYSI
Length = 519
Score = 87.4 bits (215), Expect = 8e-16
Identities = 46/119 (38%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPN 408
P+ P P+ PSY P+ PSY P+ P Y P+ Y+P Y P + P+ P YSP P+
Sbjct: 293 PSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAP---YPPG---IFPSPPEYSPEPPS 346
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 231
Y P+ P Y+P PSY PS P Y+P P + + P+Y+P P P G Y P
Sbjct: 347 YVPSPPQYAPQPPSYVPSPPVYAPYPPGITPSPPEYAPEPPPGP------PGGGGGYLP 399
Score = 69.7 bits (169), Expect = 2e-10
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSP--TSPSYGPTSPSYNP-----QSAKYSPSIAYSPSNARLSPASP- 429
P+ P +P+ P +P + P P+ P P + P I PS + P+ P
Sbjct: 245 PSPPEVTPSPPEITPYPSPPEVVPSPPEITPYPSPPEVTPSPPEITPYPSPPEIVPSPPS 304
Query: 428 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPS 252
Y P+ P+Y P+ P Y+P P Y+P P PS P S P Y PS Y+P P Y PS
Sbjct: 305 YEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPS 364
Score = 60.8 bits (146), Expect = 8e-08
Identities = 35/112 (31%), Positives = 43/112 (38%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
Y+P PG P+ P YSP PSY P+ P Y PQ Y PS P
Sbjct: 326 YAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPS-------------------PP 366
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSP 255
Y+P P +P+ P Y+P P P G Y P + P P
Sbjct: 367 VYAPYPPGITPSPPEYAPEPP------PGPPGGGGGYLPPVVFPPPYASRGP 412
Score = 59.3 bits (142), Expect = 2e-07
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 11/130 (8%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNP-----QSAKYSPSIAYSPSNARLSPASPYS 423
+P+ P +P P P+ P P P P + P I PS + P+ P
Sbjct: 214 APSPPTVTPMPPIIYPSPPEVTPGPPEITPYPSPPEVTPSPPEITPYPSPPEVVPSPPEI 273
Query: 422 ---PTSPNYSPTSPSYSP--TSPSYSPSSPTYSPSSPYSSGASPDYSPSAG-YSPTLPGY 261
P+ P +P+ P +P + P PS P+Y PS P + P+Y+P Y+P PG
Sbjct: 274 TPYPSPPEVTPSPPEITPYPSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGI 333
Query: 260 SPSSTGQYTP 231
PS +Y+P
Sbjct: 334 FPSPP-EYSP 342
[218][TOP]
>UniRef100_C6F1F7 DNA-directed RNA polymerase n=1 Tax=Plasmodium gallinaceum
RepID=C6F1F7_PLAGA
Length = 2200
Score = 87.4 bits (215), Expect = 8e-16
Identities = 62/150 (41%), Positives = 77/150 (51%), Gaps = 12/150 (8%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPNYS 402
SP YSPTSPSY+ + Y PTSP K +I Y+ + S SP YSP SP YS
Sbjct: 2040 SPSYSPTSPSYNADNVYYSPTSPKNQMDDVK--SNIKYNVMSPVYSVTSPKYSPMSPQYS 2097
Query: 401 PTSP-SYSPTSPSYSP---SSPTYSPSSPYSSGASPDYSPSA--GYSPTLPGY---SPSS 249
PTSP + +P SP YSP +SP +SP+SP S +SP Y +A P P Y SP
Sbjct: 2098 PTSPVANNPGSPHYSPYSITSPKFSPTSPAYSISSPVYDKNAVLNNQPLSPAYIIQSPVQ 2157
Query: 248 TGQYT--PHEGDKKDKTGKKDASKDDKGNP 165
Q T H +T K + DD +P
Sbjct: 2158 VKQNTQDAHMFSPIQQTNKNETQNDDPFSP 2187
Score = 72.8 bits (177), Expect = 2e-11
Identities = 45/97 (46%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSP-SYNPQSAKYSPSIAYSPSNARLSPASPYSPTS 414
Y+ SP YS TSP YSP SP Y PTSP + NP S Y SPYS TS
Sbjct: 2075 YNVMSPVYSVTSPKYSPMSPQYSPTSPVANNPGSPHY----------------SPYSITS 2118
Query: 413 PNYSPTSPSYSPTSPSY--------SPSSPTYSPSSP 327
P +SPTSP+YS +SP Y P SP Y SP
Sbjct: 2119 PKFSPTSPAYSISSPVYDKNAVLNNQPLSPAYIIQSP 2155
[219][TOP]
>UniRef100_A3AU48 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=A3AU48_ORYSJ
Length = 269
Score = 87.0 bits (214), Expect = 1e-15
Identities = 42/102 (41%), Positives = 61/102 (59%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSP 399
SP Y+P++P SP Y P++P S ++PS +SPS SP YSP++P
Sbjct: 45 SPEYTPSTPWRRAASPDYTPSTPWRRAASPDHAPSPPWSPSRRAASP--DYSPSTPPRRA 102
Query: 398 TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPT 273
SP YSP++P +SP Y+PS+P+ ASPDY+PS + P+
Sbjct: 103 ASPDYSPSTPPRRAASPDYTPSTPWRRAASPDYAPSTPWKPS 144
Score = 55.5 bits (132), Expect = 3e-06
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Frame = -3
Query: 422 PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPT----LPGYSP 255
P P + SP Y+P++P +SP Y+PS+P+ ASPD++PS +SP+ P YSP
Sbjct: 36 PPPPPRTAASPEYTPSTPWRRAASPDYTPSTPWRRAASPDHAPSPPWSPSRRAASPDYSP 95
Query: 254 SS 249
S+
Sbjct: 96 ST 97
[220][TOP]
>UniRef100_UPI0001B7BF92 zinc finger protein 768 n=1 Tax=Rattus norvegicus
RepID=UPI0001B7BF92
Length = 570
Score = 86.7 bits (213), Expect = 1e-15
Identities = 46/123 (37%), Positives = 57/123 (46%), Gaps = 9/123 (7%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKY-SPSIAYSPSNARLSPASP------- 429
P SPG+ P SP + SP + P SP + +S + PS ++P + P SP
Sbjct: 62 PQSPGFEPQSPEFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSS 121
Query: 428 -YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPS 252
Y P SP Y P SP Y P SP Y P SP Y SP SP G PGY P
Sbjct: 122 RYEPQSPGYDPKSPGYEPGSPRYEPKSPGYGSKSPEFESQSP------GCESQSPGYEPQ 175
Query: 251 STG 243
++G
Sbjct: 176 NSG 178
Score = 79.3 bits (194), Expect = 2e-13
Identities = 39/99 (39%), Positives = 47/99 (47%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
+ SPG+ P SP ++P SP P SP + QS++Y P SP Y P SP
Sbjct: 88 FESRSPGFVPPSPEFAPRSPESDPQSPEFESQSSRYEPQ---SPG---------YDPKSP 135
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP 294
Y P SP Y P SP Y SP + SP SP Y P
Sbjct: 136 GYEPGSPRYEPKSPGYGSKSPEFESQSPGCESQSPGYEP 174
[221][TOP]
>UniRef100_Q7XRB2 OSJNBa0006B20.10 protein n=3 Tax=Oryza sativa RepID=Q7XRB2_ORYSJ
Length = 335
Score = 86.7 bits (213), Expect = 1e-15
Identities = 57/149 (38%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Frame = -3
Query: 584 PTSPGYSPTSPSYS-PTSPSYGPTSPSYNPQSAKYSP--------SIAYSPSNARLSPAS 432
P SP Y+P SP + SP Y P SP S YSP S Y+P + AS
Sbjct: 58 PPSPDYTPASPPHRRAASPDYTPESPPRRAASPDYSPASPPRRAASPDYTPESPPRRAAS 117
Query: 431 P-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY---SPSAGYSPTLPG 264
P YSP SP SP Y+P SPS +SP Y+P SP ASPDY SPS + + P
Sbjct: 118 PDYSPESPPRRAASPDYTPASPSRRAASPDYTPESPPRRAASPDYTPASPSRRAAASSPD 177
Query: 263 YSPSSTGQYTPHEGDKKDKTGKKDASKDD 177
Y+P S + D T + A+ D
Sbjct: 178 YTPESPPRRRAASPDYSPSTPPRRAASPD 206
Score = 85.9 bits (211), Expect = 2e-15
Identities = 60/159 (37%), Positives = 74/159 (46%), Gaps = 30/159 (18%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQS-AKYSPSIAYSPSNARLSPASP-YSPT 417
YSP SP SP Y+P SP SP Y+P+S + + S Y+P++ ASP Y+P
Sbjct: 92 YSPASPPRRAASPDYTPESPPRRAASPDYSPESPPRRAASPDYTPASPSRRAASPDYTPE 151
Query: 416 SPNYSPTSPSYSPTSPS---------YSP--------SSPTYSPSSPYSSGASPDYSPSA 288
SP SP Y+P SPS Y+P +SP YSPS+P ASPDYSPS
Sbjct: 152 SPPRRAASPDYTPASPSRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASPDYSPST 211
Query: 287 --------GYSPTLP---GYSPSSTGQYTPHEGDKKDKT 204
YSP+ P SP T P D T
Sbjct: 212 PPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAASPDYT 250
Score = 85.5 bits (210), Expect = 3e-15
Identities = 59/151 (39%), Positives = 69/151 (45%), Gaps = 22/151 (14%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSP SP SP Y+P SPS SP Y P+S P A SP SP+ + +SP
Sbjct: 120 YSPESPPRRAASPDYTPASPSRRAASPDYTPESP---PRRAASPDYTPASPSRRAAASSP 176
Query: 410 NYSP--------TSPSYSPT-------SPSYSPS-------SPTYSPSSPYSSGASPDYS 297
+Y+P SP YSP+ SP YSPS SP YSPS+P ASPDY+
Sbjct: 177 DYTPESPPRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYT 236
Query: 296 PSAGYSPTLPGYSPSSTGQYTPHEGDKKDKT 204
P SP SP T P D T
Sbjct: 237 P---MSPPRRAASPDYTQMTPPRRAASPDYT 264
Score = 81.3 bits (199), Expect = 5e-14
Identities = 60/173 (34%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSY--GPTSPSYNPQSAK--------YSPSIA--------Y 465
Y+P SP SP Y+P SPS +SP Y P+S YSPS Y
Sbjct: 148 YTPESPPRRAASPDYTPASPSRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASPDY 207
Query: 464 SPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA 288
SPS ASP YSP++P SP Y+P SP +SP Y+ +P ASPDY+PS
Sbjct: 208 SPSTPPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAASPDYTQMTPPRRAASPDYTPST 267
Query: 287 GYSP--TLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP*KRVRIGNPC 135
P P Y+PS TP + +P +R R G C
Sbjct: 268 PPPPRAASPDYTPS-----TPPSSPLPSAAESFTVPPPRRYHPYQRSRSGGAC 315
Score = 68.2 bits (165), Expect = 5e-10
Identities = 46/141 (32%), Positives = 59/141 (41%), Gaps = 8/141 (5%)
Frame = -3
Query: 563 PTSPSYSPTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS 387
P SP Y+P SP + SP Y P+S P SP+YSP SP
Sbjct: 58 PPSPDYTPASPPHRRAASPDYTPESP-------------------PRRAASPDYSPASPP 98
Query: 386 YSPTSPSYSP-------SSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
SP Y+P +SP YSP SP ASPDY+P+ SP+ SP T + P
Sbjct: 99 RRAASPDYTPESPPRRAASPDYSPESPPRRAASPDYTPA---SPSRRAASPDYTPESPPR 155
Query: 227 EGDKKDKTGKKDASKDDKGNP 165
D T + + +P
Sbjct: 156 RAASPDYTPASPSRRAAASSP 176
[222][TOP]
>UniRef100_B9G524 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9G524_ORYSJ
Length = 536
Score = 85.5 bits (210), Expect = 3e-15
Identities = 41/105 (39%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP-SIAYSPSNARLSPASP-YSPTSP 411
P+ P P+ PSY P+ PSY P+ P Y P+ Y+P PS SP P Y P+ P
Sbjct: 330 PSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPP 389
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSP 276
Y+P PSY P+ P Y+P P Y+P P + + P+Y+P P
Sbjct: 390 QYAPQPPSYVPSPPEYAPEPPVYAPYPPGITPSPPEYAPEPPPGP 434
Score = 76.3 bits (186), Expect = 2e-12
Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPASP-YSPTSP 411
P+ P Y P+ PSY P+ P Y P P Y P PS YSP P+ P Y+P P
Sbjct: 337 PSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPP 396
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
+Y P+ P Y+P P Y+P P +PS P + P P + G P++
Sbjct: 397 SYVPSPPEYAPEPPVYAPYPPGITPSPPEYAPEPPPGPPGRWWRVPAAGGVPAA 450
Score = 59.7 bits (143), Expect = 2e-07
Identities = 45/160 (28%), Positives = 61/160 (38%), Gaps = 41/160 (25%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYS-----PSIAYSPSNARLSPA---- 435
+P+ P +P P P+ P P+ P P + P I PS ++P+
Sbjct: 235 APSPPIVTPMPPIIYPSPPEVTPSPPEITPYPSPPEVTPGPPEITPYPSPPEITPSPPEI 294
Query: 434 SPYS-------------------------------PTSPNYSPTSPSYSPTSPSYSPSSP 348
+PY P+ P+ P+ PSY P+ PSY PS P
Sbjct: 295 TPYPSPPEVVPSPPKITPYPSPPEVTPSPPEITPYPSPPDIVPSPPSYEPSPPSYEPSPP 354
Query: 347 TYSPSSPYSSGASPDYSPS-AGYSPTLPGYSPSSTGQYTP 231
Y+P P + P PS YSP P Y PS QY P
Sbjct: 355 EYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPP-QYAP 393
[223][TOP]
>UniRef100_B3P904 GG12928 n=1 Tax=Drosophila erecta RepID=B3P904_DROER
Length = 558
Score = 85.5 bits (210), Expect = 3e-15
Identities = 65/138 (47%), Positives = 83/138 (60%), Gaps = 20/138 (14%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAK-YSPSIAYSPSNARLSPASPYS- 423
+P S YS P +PSYS P +PSY P +PSY+ Q A YS +A S S A +PAS YS
Sbjct: 267 APASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAQKASSYSAPVAPSYS-APAAPASSYSA 325
Query: 422 PTSPNYS-PTSPSYS--------PTSPSYS-PSSPTYS-PSSP-YSSGASPDYSPSAGYS 279
P P+YS P +PSYS P +PSYS P++P+YS P++P YS+ ASP YS SA S
Sbjct: 326 PAGPSYSAPAAPSYSAPASSYSAPKAPSYSAPAAPSYSAPAAPSYSASASPSYSSSASSS 385
Query: 278 ---PTLPGYSPSSTGQYT 234
P P YS + Y+
Sbjct: 386 YSAPAAPSYSAPAAPSYS 403
Score = 84.7 bits (208), Expect = 5e-15
Identities = 66/153 (43%), Positives = 87/153 (56%), Gaps = 34/153 (22%)
Frame = -3
Query: 590 YSPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYN---------PQSAKYS----PSIAYSP 459
YSP +P YS P SPSYS P S SY P +PSY+ P S+KYS PS +
Sbjct: 82 YSPAAPSYSAPASPSYSAPASSSYSAPAAPSYSAPAAPSYSAPASSKYSAPAAPSYSAPA 141
Query: 458 SNARLSPASP-YS-PTSPNYS---------PTSPSYS-PTSPSYS-PSSPTYS--PSSPY 324
S++ +PA+P YS P +P+YS P +PSYS P +PSYS P++P+YS SS Y
Sbjct: 142 SSSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPASSSY 201
Query: 323 SSGASPDYSPSAGYS---PTLPGYSPSSTGQYT 234
S+ A+P YS A S P P YS ++ Y+
Sbjct: 202 SAPAAPSYSAPAAPSYSAPAAPSYSAPASSSYS 234
Score = 82.4 bits (202), Expect = 2e-14
Identities = 63/137 (45%), Positives = 83/137 (60%), Gaps = 18/137 (13%)
Frame = -3
Query: 590 YSPTSP-GYS-PTSPSYSPTSPSY-GPTSPSYN-PQSAKYS----PSIAYSPSNARLSPA 435
YSP GYS P +P+YSP +PSY P SPSY+ P S+ YS PS + + + +PA
Sbjct: 66 YSPAKDQGYSAPAAPAYSPAAPSYSAPASPSYSAPASSSYSAPAAPSYSAPAAPSYSAPA 125
Query: 434 -SPYS-PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS--PSSPYSSGASPDYSPSAGYS- 279
S YS P +P+YS P S SYS P +PSYS P++P+YS SS YS+ A+P YS A S
Sbjct: 126 SSKYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSY 185
Query: 278 --PTLPGYSPSSTGQYT 234
P P YS ++ Y+
Sbjct: 186 SAPAAPSYSAPASSSYS 202
Score = 78.6 bits (192), Expect = 3e-13
Identities = 60/139 (43%), Positives = 81/139 (58%), Gaps = 21/139 (15%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P +P YS P S SYS P +PSY P +PSY SA +PS + S++ +PA+P YS
Sbjct: 155 APAAPSYSAPASSSYSAPAAPSYSAPAAPSY---SAPAAPSYSAPASSSYSAPAAPSYSA 211
Query: 422 PTSPNYS-PTSPSYS---------PTSPSYS-PSSPTYS--PSSPYSSGASPDYSPSAGY 282
P +P+YS P +PSYS P +PSYS P++P+YS SS YS+ A+P YS A
Sbjct: 212 PAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPASS 271
Query: 281 S---PTLPGYSPSSTGQYT 234
S P P YS + Y+
Sbjct: 272 SYSAPAAPSYSAPAAPSYS 290
Score = 78.6 bits (192), Expect = 3e-13
Identities = 62/145 (42%), Positives = 86/145 (59%), Gaps = 27/145 (18%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSY-GPTSPSYN-PQSAKYS----PSIAYSPSNARLSPAS 432
+P +P YS P S SYS P +PSY P +PSY+ P S+ YS PS + S++ +PA+
Sbjct: 219 APAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPASSSYSAPAA 278
Query: 431 P-YS-PTSPNYS-PTSPSYS---------PTSPSYS-PSSPTYSPSSP----YSSGASPD 303
P YS P +P+YS P +PSYS P +PSYS P++P S S+P YS+ A+P
Sbjct: 279 PSYSAPAAPSYSAPAAPSYSAQKASSYSAPVAPSYSAPAAPASSYSAPAGPSYSAPAAPS 338
Query: 302 YS-PSAGYS-PTLPGYSPSSTGQYT 234
YS P++ YS P P YS + Y+
Sbjct: 339 YSAPASSYSAPKAPSYSAPAAPSYS 363
Score = 78.2 bits (191), Expect = 5e-13
Identities = 59/133 (44%), Positives = 82/133 (61%), Gaps = 15/133 (11%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYN-PQSAKYS----PSIAYSPSNARLSPAS 432
+P +P YS P S SYS P +PSY P +PSY+ P S+ YS PS + + + +PA+
Sbjct: 131 APAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAA 190
Query: 431 P-YS-PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS--PSSPYSSGASPDYSPSAGYSPT 273
P YS P S +YS P +PSYS P +PSYS P++P+YS SS YS+ A+P YS +P
Sbjct: 191 PSYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYS-----APA 245
Query: 272 LPGYSPSSTGQYT 234
P YS ++ Y+
Sbjct: 246 APSYSAPASSSYS 258
Score = 76.3 bits (186), Expect = 2e-12
Identities = 57/138 (41%), Positives = 77/138 (55%), Gaps = 20/138 (14%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSY---------GPTSPSYN-PQSAKYSPSIAYSPSNARL 444
+P +P YS P +PSYS P +PSY P +PSY+ P + YS A PS +
Sbjct: 171 APAAPSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAA--PSYSAP 228
Query: 443 SPASPYSPTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS--PSSPYSSGASPDYSPSAGYS 279
+ +S +P +P+YS P +PSYS P S SYS P++P+YS SS YS+ A+P YS A S
Sbjct: 229 ASSSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPS 288
Query: 278 ---PTLPGYSPSSTGQYT 234
P P YS Y+
Sbjct: 289 YSAPAAPSYSAQKASSYS 306
Score = 75.9 bits (185), Expect = 2e-12
Identities = 62/149 (41%), Positives = 82/149 (55%), Gaps = 31/149 (20%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYN-PQSAKYSPSIAYSPSNARLSPASP-YS 423
+P +P YS P +PSYS P S SY P +PSY+ P S+ YS A S S +PA+P YS
Sbjct: 235 APAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPASSSYSAPAAPSYS----APAAPSYS 290
Query: 422 -PTSPNYS---------PTSPSYS-----------PTSPSYS-PSSPTYS-PSSPYSSGA 312
P +P+YS P +PSYS P PSYS P++P+YS P+S YS+
Sbjct: 291 APAAPSYSAQKASSYSAPVAPSYSAPAAPASSYSAPAGPSYSAPAAPSYSAPASSYSAPK 350
Query: 311 SPDYSPSAGYS---PTLPGYSPSSTGQYT 234
+P YS A S P P YS S++ Y+
Sbjct: 351 APSYSAPAAPSYSAPAAPSYSASASPSYS 379
Score = 74.7 bits (182), Expect = 5e-12
Identities = 59/136 (43%), Positives = 83/136 (61%), Gaps = 18/136 (13%)
Frame = -3
Query: 587 SPTSPGYS--------PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSP 438
+P +P YS P +PSYS P +PSY P +PSY SA SPS + S S++ +P
Sbjct: 333 APAAPSYSAPASSYSAPKAPSYSAPAAPSYSAPAAPSY---SASASPSYSSSASSSYSAP 389
Query: 437 ASP-YS-PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYSPSSPYSSGASPDYSPSAGYS-- 279
A+P YS P +P+YS P S SYS P +PSYS P+S YS + YS+G++ +P++GYS
Sbjct: 390 AAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPASSGYSAARAYSAGSA---APASGYSAP 446
Query: 278 PTLPGYS-PSSTGQYT 234
GYS P ++ Y+
Sbjct: 447 KASSGYSAPKASSGYS 462
Score = 73.9 bits (180), Expect = 9e-12
Identities = 58/146 (39%), Positives = 82/146 (56%), Gaps = 28/146 (19%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYN-PQSAKYSPSIAYS------PSNARLSP 438
+P S YS P +PSYS P +PSY P +PSY+ P S+ YS A S PS + +
Sbjct: 195 APASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAS 254
Query: 437 ASPYSPTSPNYS---------PTSPSYS-PTSPSYS-PSSPTYS--PSSPYSSGASPDYS 297
+S +P +P+YS P +PSYS P +PSYS P++P+YS +S YS+ +P YS
Sbjct: 255 SSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAQKASSYSAPVAPSYS 314
Query: 296 ----PSAGYS-PTLPGYSPSSTGQYT 234
P++ YS P P YS + Y+
Sbjct: 315 APAAPASSYSAPAGPSYSAPAAPSYS 340
Score = 69.3 bits (168), Expect = 2e-10
Identities = 61/145 (42%), Positives = 81/145 (55%), Gaps = 23/145 (15%)
Frame = -3
Query: 587 SPTSPGYS-PTSP--SYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-Y 426
+P +P YS P +P SYS P PSY P +PSY+ ++ YS A S S +PA+P Y
Sbjct: 307 APVAPSYSAPAAPASSYSAPAGPSYSAPAAPSYSAPASSYSAPKAPSYS----APAAPSY 362
Query: 425 S-PTSPNYSPT-SPSYS---------PTSPSYS-PSSPTYS--PSSPYSSGASPDYSPSA 288
S P +P+YS + SPSYS P +PSYS P++P+YS SS YS+ A+P YS
Sbjct: 363 SAPAAPSYSASASPSYSSSASSSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYS--- 419
Query: 287 GYSPTLPGYSPS---STGQYTPHEG 222
+P GYS + S G P G
Sbjct: 420 --APASSGYSAARAYSAGSAAPASG 442
Score = 67.4 bits (163), Expect = 8e-10
Identities = 54/134 (40%), Positives = 76/134 (56%), Gaps = 16/134 (11%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYSPTSPSYG-PTSPSYNPQSAKYSP----------SIAYSPSNARL 444
+P P YS P +PSYS + SY P +PSY SA +P S + SPS +
Sbjct: 325 APAGPSYSAPAAPSYSAPASSYSAPKAPSY---SAPAAPSYSAPAAPSYSASASPSYSSS 381
Query: 443 SPASPYSPTSPNYS-PTSPSYS-PTSPSYS-PSSPTYSPSSPYSSGASPDYSPSAGYSPT 273
+ +S +P +P+YS P +PSYS P S SYS P++P+Y S+P SSG S + SAG +
Sbjct: 382 ASSSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSY--SAPASSGYSAARAYSAGSAAP 439
Query: 272 LPGYS-PSSTGQYT 234
GYS P ++ Y+
Sbjct: 440 ASGYSAPKASSGYS 453
Score = 61.2 bits (147), Expect = 6e-08
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 10/94 (10%)
Frame = -3
Query: 485 YSPSIAYSPSNARLSPASPY---SPTSPNYSPTSPSYS-PTSPSYS-PSSPTYS-PSSP- 327
Y+P + Y+ S + SPA +P +P YSP +PSYS P SPSYS P+S +YS P++P
Sbjct: 54 YAPPVVYN-SQSSYSPAKDQGYSAPAAPAYSPAAPSYSAPASPSYSAPASSSYSAPAAPS 112
Query: 326 YSSGASPDYS--PSAGYS-PTLPGYSPSSTGQYT 234
YS+ A+P YS S+ YS P P YS ++ Y+
Sbjct: 113 YSAPAAPSYSAPASSKYSAPAAPSYSAPASSSYS 146
[224][TOP]
>UniRef100_O09451 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bonnemaisonia hamifera
RepID=O09451_9FLOR
Length = 1732
Score = 85.1 bits (209), Expect = 4e-15
Identities = 65/160 (40%), Positives = 81/160 (50%), Gaps = 40/160 (25%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSP---TSPSYGP--------------TSPSYNPQSAKYSPSIAYS 462
++P SP Y PTSP SP SP+ P +P P +A S +YS
Sbjct: 1573 FAPASPAYRPTSPGPSPYAAQSPAQSPGVQYSPDKSRVQVQRAPPTAPSAAGGGASRSYS 1632
Query: 461 PSN------ARLSPASPYSPTSPNYSPTSP-SYSPTSP-SYSPSSPT---YSPSSP---- 327
PS+ SP + Y SP YSP+SP +YSP+SP ++SPSSP YSPS+P
Sbjct: 1633 PSSPSYNGRGAASPGANYVAASPGYSPSSPGAYSPSSPAAFSPSSPAAGGYSPSTPAYTA 1692
Query: 326 ------YSSGASPDYSPS--AGYSPTLPGYSPSSTGQYTP 231
YS SP Y PS G SP+ P YSPSS QY+P
Sbjct: 1693 NAAANQYSYARSPRYPPSYANGTSPSSPQYSPSSP-QYSP 1731
[225][TOP]
>UniRef100_Q3JTV6 Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei
1710b RepID=Q3JTV6_BURP1
Length = 364
Score = 84.7 bits (208), Expect = 5e-15
Identities = 69/135 (51%), Positives = 87/135 (64%), Gaps = 4/135 (2%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
SPTSP SPTSP+ SPTSP+ PTSP+ +P S SP+ SP++ SP SP SPTSP
Sbjct: 210 SPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSPTSPTSPT-SPTSPTSPTSPT 263
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYS--SGASP--DYSPSAGYSPTLPGYSPSSTGQ 240
SPTSP+ SPTSP+ SP+SPT SP+SP S S SP SP++ SPT P S T
Sbjct: 264 -SPTSPT-SPTSPT-SPTSPT-SPTSPTSPTSPTSPTSPTSPTSPTSPTSPTSPTSPTSP 319
Query: 239 YTPHEGDKKDKTGKK 195
+P D+ D+ G++
Sbjct: 320 TSPGRSDQYDRRGRQ 334
Score = 69.7 bits (169), Expect = 2e-10
Identities = 59/119 (49%), Positives = 70/119 (58%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
SPTSP SPTSP+ SPTSP+ PTSP+ SP SP SPTSP
Sbjct: 183 SPTSPT-SPTSPT-SPTSPT-SPTSPT---------------------SPTSPTSPTSPT 218
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 231
SPTSP+ SPTSP+ SP+SPT SP+SP +S SP SP++ SPT P S T +P
Sbjct: 219 -SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPTSPTSPTSPTSPTSPTSP 271
Score = 61.2 bits (147), Expect = 6e-08
Identities = 52/111 (46%), Positives = 63/111 (56%)
Frame = -3
Query: 563 PTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSY 384
P SP+ SPTSP+ PTSP+ SP SP SPTSP SPTSP+
Sbjct: 181 PVSPT-SPTSPT-SPTSPT---------------------SPTSPTSPTSPT-SPTSPT- 215
Query: 383 SPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 231
SPTSP+ SP+SPT SP+SP +S SP SP++ SPT P S T +P
Sbjct: 216 SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPTSPTSPTSPTSPTSPTSP 262
Score = 58.9 bits (141), Expect = 3e-07
Identities = 52/119 (43%), Positives = 64/119 (53%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
+P+ P P SPTSP+ PTSP+ SP SP SPTSP
Sbjct: 170 APSRARRRPRRP-VSPTSPT-SPTSPT---------------------SPTSPTSPTSPT 206
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 231
SPTSP+ SPTSP+ SP+SPT SP+SP +S SP SP++ SPT P S T +P
Sbjct: 207 -SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSPTSPTSPTSPTSPTSPTSP 259
Score = 57.8 bits (138), Expect = 6e-07
Identities = 43/88 (48%), Positives = 55/88 (62%)
Frame = -3
Query: 494 SAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 315
+ + +PS A +SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S
Sbjct: 166 AGRAAPSRARRRPRRPVSPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSP 220
Query: 314 ASPDYSPSAGYSPTLPGYSPSSTGQYTP 231
SP SP++ SPT P S T +P
Sbjct: 221 TSPT-SPTSPTSPTSPTSPTSPTSPTSP 247
[226][TOP]
>UniRef100_B1HHT1 Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei
S13 RepID=B1HHT1_BURPS
Length = 282
Score = 84.7 bits (208), Expect = 5e-15
Identities = 69/135 (51%), Positives = 87/135 (64%), Gaps = 4/135 (2%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
SPTSP SPTSP+ SPTSP+ PTSP+ +P S SP+ SP++ SP SP SPTSP
Sbjct: 128 SPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSPTSPTSPT-SPTSPTSPTSPT 181
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYS--SGASP--DYSPSAGYSPTLPGYSPSSTGQ 240
SPTSP+ SPTSP+ SP+SPT SP+SP S S SP SP++ SPT P S T
Sbjct: 182 -SPTSPT-SPTSPT-SPTSPT-SPTSPTSPTSPTSPTSPTSPTSPTSPTSPTSPTSPTSP 237
Query: 239 YTPHEGDKKDKTGKK 195
+P D+ D+ G++
Sbjct: 238 TSPGRSDQYDRRGRQ 252
Score = 58.9 bits (141), Expect = 3e-07
Identities = 42/78 (53%), Positives = 51/78 (65%)
Frame = -3
Query: 464 SPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAG 285
+PS AR P P SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP SP++
Sbjct: 115 APSRARRRPRRPVSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSP 168
Query: 284 YSPTLPGYSPSSTGQYTP 231
SPT P S T +P
Sbjct: 169 TSPTSPTSPTSPTSPTSP 186
Score = 57.8 bits (138), Expect = 6e-07
Identities = 43/88 (48%), Positives = 55/88 (62%)
Frame = -3
Query: 494 SAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 315
+ + +PS A +SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S
Sbjct: 111 AGRAAPSRARRRPRRPVSPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSP 165
Query: 314 ASPDYSPSAGYSPTLPGYSPSSTGQYTP 231
SP SP++ SPT P S T +P
Sbjct: 166 TSPT-SPTSPTSPTSPTSPTSPTSPTSP 192
[227][TOP]
>UniRef100_Q7RJS0 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RJS0_PLAYO
Length = 2312
Score = 84.0 bits (206), Expect = 8e-15
Identities = 48/97 (49%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = -3
Query: 536 SPSYGPTSPSYNPQS-AKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYS 360
SPSY PTSP+YN + A YSP+ + ++ + Y+ SP YS TSP YSPTSP YS
Sbjct: 2149 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYS 2208
Query: 359 PSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
PSSP P++P S SP S +SPT P YS SS
Sbjct: 2209 PSSPV--PNNPSSPQYSPYSITSPKFSPTSPAYSISS 2243
Score = 79.0 bits (193), Expect = 3e-13
Identities = 59/162 (36%), Positives = 77/162 (47%), Gaps = 24/162 (14%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSY-GPTSPS------------YNPQSAKYS-PSIAYSPSNARLS 441
SP YSPTSP+Y+ + +Y PTSP YN S YS S YSP++ + S
Sbjct: 2149 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYS 2208
Query: 440 PASPY--SPTSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSP 276
P+SP +P+SP YSP TSP +SPTSP+YS SSP Y + AG +P
Sbjct: 2209 PSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKN-----------ENMAGKNP 2257
Query: 275 TLPGYSPSSTGQYTPHEGDKK-----DKTGKKDASKDDKGNP 165
P Y S Q + + + G D DD +P
Sbjct: 2258 LSPAYMLQSRVQIRQNAQGTQVFSPIQQGGANDVQNDDPFSP 2299
[228][TOP]
>UniRef100_Q25655 RNA polymerase largest subunit (Fragment) n=1 Tax=Plasmodium
berghei RepID=Q25655_PLABE
Length = 204
Score = 84.0 bits (206), Expect = 8e-15
Identities = 52/118 (44%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Frame = -3
Query: 536 SPSYGPTSPSYNPQS-AKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYS 360
SPSY PTSP+YN + A YSP+ + ++ + Y+ SP YS TSP YSPTSP YS
Sbjct: 41 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPKYS 100
Query: 359 PSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDAS 186
P+SP P++P S SP S +SPT P YS SS P ++ TGK S
Sbjct: 101 PTSPV--PNNPSSPQYSPYSITSPKFSPTSPAYSISS-----PVYDKNENMTGKNPLS 151
Score = 80.9 bits (198), Expect = 7e-14
Identities = 59/152 (38%), Positives = 78/152 (51%), Gaps = 14/152 (9%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPS-YGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPNY 405
SP YSPTSP+Y+ + + Y PTSP N S + Y+ + S SP YSPTSP Y
Sbjct: 41 SPSYSPTSPTYNANNNAYYSPTSPK-NQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPKY 99
Query: 404 SPTSP-SYSPTSPSYSP---SSPTYSPSSPYSSGASPDYSPS---AGYSPTLPGYSPSST 246
SPTSP +P+SP YSP +SP +SP+SP S +SP Y + G +P P Y S
Sbjct: 100 SPTSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKNENMTGKNPLSPAYMLQSR 159
Query: 245 GQYTPHEGDKK-----DKTGKKDASKDDKGNP 165
Q + + + G D DD +P
Sbjct: 160 VQIRQNAQGTQVFSPIQQGGAHDVQNDDPFSP 191
Score = 73.2 bits (178), Expect = 1e-11
Identities = 44/93 (47%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSP-SYNPQSAKYSPSIAYSPSNARLSPASPYSPTS 414
Y+ SP YS TSP YSPTSP Y PTSP NP S +Y SPYS TS
Sbjct: 78 YNIMSPVYSVTSPKYSPTSPKYSPTSPVPNNPSSPQY----------------SPYSITS 121
Query: 413 PNYSPTSPSYSPTSPSY---------SPSSPTY 342
P +SPTSP+YS +SP Y +P SP Y
Sbjct: 122 PKFSPTSPAYSISSPVYDKNENMTGKNPLSPAY 154
[229][TOP]
>UniRef100_B4JMW7 GH24704 n=1 Tax=Drosophila grimshawi RepID=B4JMW7_DROGR
Length = 692
Score = 84.0 bits (206), Expect = 8e-15
Identities = 62/132 (46%), Positives = 83/132 (62%), Gaps = 14/132 (10%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYSPTSPSYG-PTSPSYNPQSAKYS--PSIAYS-PSNARLSPASP-Y 426
+P +P YS P PSYS + SY P +PSY+ + YS S +YS P+ + SPASP Y
Sbjct: 223 APAAPSYSAPKGPSYSAPAQSYSAPAAPSYSEPAQSYSAPASPSYSAPAQSYSSPASPSY 282
Query: 425 S-PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYS-PSAGYS-PTL 270
S P +P+YS P +PSYS P +PSYS P++P+YS P P YS+ A+P YS P+ YS P
Sbjct: 283 SAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPKGPSYSAPAAPSYSAPAQSYSAPAA 342
Query: 269 PGYSPSSTGQYT 234
P YS + Y+
Sbjct: 343 PSYSAPAAPSYS 354
Score = 83.6 bits (205), Expect = 1e-14
Identities = 62/134 (46%), Positives = 85/134 (63%), Gaps = 16/134 (11%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSY-GPTSPSYN-PQSAKYSPSIAYS---PSNARLSPASP 429
+P +P YS P +PSYS P +PSY P +PSY+ P+ YS A S P+ + +PA+P
Sbjct: 284 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPKGPSYSAPAAPSYSAPAQSYSAPAAP 343
Query: 428 -YS-PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYS-PSAGYS-P 276
YS P +P+YS P +PSYS P +PSYS P++P+YS P P YS+ A+P YS P+ YS P
Sbjct: 344 SYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPKGPSYSAPAAPSYSAPAQSYSAP 403
Query: 275 TLPGYSPSSTGQYT 234
P YS + Y+
Sbjct: 404 AAPSYSAPAAPSYS 417
Score = 82.0 bits (201), Expect = 3e-14
Identities = 62/134 (46%), Positives = 83/134 (61%), Gaps = 16/134 (11%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSY-GPTSPSYN-PQSAKYSPSIAYS---PSNARLSPASP 429
+P +P YS P +PSYS P +PSY P +PSY+ P+ YS A S P+ + +PA+P
Sbjct: 347 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPKGPSYSAPAAPSYSAPAQSYSAPAAP 406
Query: 428 -YS-PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYS-PSAGYS-P 276
YS P +P+YS P +PSYS P +PSYS P++P+YS P P YS+ A P YS P+ YS P
Sbjct: 407 SYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPKGPSYSAPADPSYSAPAQSYSAP 466
Query: 275 TLPGYSPSSTGQYT 234
P YS Y+
Sbjct: 467 AAPSYSAPKGPSYS 480
Score = 81.6 bits (200), Expect = 4e-14
Identities = 59/130 (45%), Positives = 81/130 (62%), Gaps = 11/130 (8%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSY-GPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P +P YS P +PSYS P +PSY P +PSY SA +PS + + + +PA+P YS
Sbjct: 151 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSY---SAPAAPSYSAPAAPSYSAPAAPSYSA 207
Query: 422 PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSPYSSGASPDYS-PSAGYS-PTLPGY 261
P +P+YS P +PSYS P +PSYS P P+YS P+ YS+ A+P YS P+ YS P P Y
Sbjct: 208 PAAPSYSAPAAPSYSAPAAPSYSAPKGPSYSAPAQSYSAPAAPSYSEPAQSYSAPASPSY 267
Query: 260 SPSSTGQYTP 231
S + +P
Sbjct: 268 SAPAQSYSSP 277
Score = 81.6 bits (200), Expect = 4e-14
Identities = 58/128 (45%), Positives = 80/128 (62%), Gaps = 10/128 (7%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P +P YS P +PSYS P +PSY P +PSY SA +PS + + + +PA+P YS
Sbjct: 167 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSY---SAPAAPSYSAPAAPSYSAPAAPSYSA 223
Query: 422 PTSPNYS-PTSPSYSPTSPSYS-PSSPTYS-PSSPYSSGASPDYS-PSAGY-SPTLPGYS 258
P +P+YS P PSYS + SYS P++P+YS P+ YS+ ASP YS P+ Y SP P YS
Sbjct: 224 PAAPSYSAPKGPSYSAPAQSYSAPAAPSYSEPAQSYSAPASPSYSAPAQSYSSPASPSYS 283
Query: 257 PSSTGQYT 234
+ Y+
Sbjct: 284 APAAPSYS 291
Score = 80.5 bits (197), Expect = 9e-14
Identities = 58/132 (43%), Positives = 84/132 (63%), Gaps = 10/132 (7%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P +P YS P +PSYS P +PSY P +PSY SA +PS + + + +PA+P YS
Sbjct: 111 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSY---SAPAAPSYSAPAAPSYSAPAAPSYSA 167
Query: 422 PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYSPSAGYSPTLPGYS 258
P +P+YS P +PSYS P +PSYS P++P+YS P++P YS+ A+P YS +P P YS
Sbjct: 168 PAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYS-----APAAPSYS 222
Query: 257 PSSTGQYTPHEG 222
+ Y+ +G
Sbjct: 223 APAAPSYSAPKG 234
Score = 79.7 bits (195), Expect = 2e-13
Identities = 59/136 (43%), Positives = 78/136 (57%), Gaps = 18/136 (13%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P +P YS P +PSYS P +PSY P +PSY SA +PS + + + +PA+P YS
Sbjct: 175 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSY---SAPAAPSYSAPAAPSYSAPAAPSYSA 231
Query: 422 PTSPNYS--------PTSPSYSPTSPSYS-PSSPTYS-PSSPYSSGASPDYSPSAGYS-- 279
P P+YS P +PSYS + SYS P+SP+YS P+ YSS ASP YS A S
Sbjct: 232 PKGPSYSAPAQSYSAPAAPSYSEPAQSYSAPASPSYSAPAQSYSSPASPSYSAPAAPSYS 291
Query: 278 -PTLPGYSPSSTGQYT 234
P P YS + Y+
Sbjct: 292 APAAPSYSAPAAPSYS 307
Score = 79.3 bits (194), Expect = 2e-13
Identities = 59/131 (45%), Positives = 83/131 (63%), Gaps = 13/131 (9%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P +P YS P +PSYS P +PSY P +PSY SA +PS + + + +PA+P YS
Sbjct: 79 APKAPTYSAPAAPSYSAPAAPSYSAPAAPSY---SAPAAPSYSAPAAPSYSAPAAPSYSA 135
Query: 422 PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYSPSAGYS---PTLP 267
P +P+YS P +PSYS P +PSYS P++P+YS P++P YS+ A+P YS A S P P
Sbjct: 136 PAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAP 195
Query: 266 GYSPSSTGQYT 234
YS + Y+
Sbjct: 196 SYSAPAAPSYS 206
Score = 78.6 bits (192), Expect = 3e-13
Identities = 57/123 (46%), Positives = 81/123 (65%), Gaps = 10/123 (8%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSY-GPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P +P YS P +PSYS P +PSY P +PSY SA +PS + + + +PA+P YS
Sbjct: 127 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSY---SAPAAPSYSAPAAPSYSAPAAPSYSA 183
Query: 422 PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYSPSAGYSPTLPGYS 258
P +P+YS P +PSYS P +PSYS P++P+YS P++P YS+ A+P YS G S + P S
Sbjct: 184 PAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPKGPSYSAPAQS 243
Query: 257 PSS 249
S+
Sbjct: 244 YSA 246
Score = 77.8 bits (190), Expect = 6e-13
Identities = 58/145 (40%), Positives = 80/145 (55%), Gaps = 23/145 (15%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYS----PSIAYSPSNARLSPASP 429
+P +P YS P +PSYS P PSY P +PSY+ + YS PS + + + +PA+P
Sbjct: 363 APAAPSYSAPAAPSYSAPKGPSYSAPAAPSYSAPAQSYSAPAAPSYSAPAAPSYSAPAAP 422
Query: 428 -YS-PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSPYSSGASPDYSPSAG------ 285
YS P +P+YS P +PSYS P PSYS P+ P+YS P+ YS+ A+P YS G
Sbjct: 423 SYSAPAAPSYSAPAAPSYSAPKGPSYSAPADPSYSAPAQSYSAPAAPSYSAPKGPSYSAP 482
Query: 284 ----YSPTLPGYSPSSTGQYTPHEG 222
YS YS + Y+ +G
Sbjct: 483 AAPSYSAPAQSYSAPAAPSYSASKG 507
Score = 76.6 bits (187), Expect = 1e-12
Identities = 58/140 (41%), Positives = 79/140 (56%), Gaps = 18/140 (12%)
Frame = -3
Query: 587 SPTSPGYS--------PTSPSYSPTSPSY-GPTSPSYNPQSAKYSPSIAYSPSNARLSPA 435
+P +P YS P SPSYS + SY P SPSY SA +PS + + + +PA
Sbjct: 246 APAAPSYSEPAQSYSAPASPSYSAPAQSYSSPASPSY---SAPAAPSYSAPAAPSYSAPA 302
Query: 434 SP-YS-PTSPNYS-PTSPSYS-PTSPSYSPSSPTYS-PSSP-YSSGASPDYSPSAGYS-- 279
+P YS P +P+YS P PSYS P +PSYS + +YS P++P YS+ A+P YS A S
Sbjct: 303 APSYSAPAAPSYSAPKGPSYSAPAAPSYSAPAQSYSAPAAPSYSAPAAPSYSAPAAPSYS 362
Query: 278 -PTLPGYSPSSTGQYTPHEG 222
P P YS + Y+ +G
Sbjct: 363 APAAPSYSAPAAPSYSAPKG 382
Score = 76.3 bits (186), Expect = 2e-12
Identities = 56/133 (42%), Positives = 78/133 (58%), Gaps = 11/133 (8%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYSPTSPSY-GPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS-P 420
+P P YS P +PSYS + SY P +PSY SA +PS + + + +PA+P YS P
Sbjct: 316 APKGPSYSAPAAPSYSAPAQSYSAPAAPSY---SAPAAPSYSAPAAPSYSAPAAPSYSAP 372
Query: 419 TSPNYS-PTSPSYS-PTSPSYSPSSPTYS-PSSP-YSSGASPDYSPSAGYS---PTLPGY 261
+P+YS P PSYS P +PSYS + +YS P++P YS+ A+P YS A S P P Y
Sbjct: 373 AAPSYSAPKGPSYSAPAAPSYSAPAQSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSY 432
Query: 260 SPSSTGQYTPHEG 222
S + Y+ +G
Sbjct: 433 SAPAAPSYSAPKG 445
Score = 76.3 bits (186), Expect = 2e-12
Identities = 58/133 (43%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYSPTSPSY-GPTSPSYN-PQSAKYS----PSIAYSPSNARLSPASP 429
+P P YS P +PSYS + SY P +PSY+ P + YS PS + + + +PA+P
Sbjct: 379 APKGPSYSAPAAPSYSAPAQSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAP 438
Query: 428 -YS-PTSPNYS-PTSPSYSPTSPSYS-PSSPTYS-PSSP-YSSGASPDYS-PSAGYS-PT 273
YS P P+YS P PSYS + SYS P++P+YS P P YS+ A+P YS P+ YS P
Sbjct: 439 SYSAPKGPSYSAPADPSYSAPAQSYSAPAAPSYSAPKGPSYSAPAAPSYSAPAQSYSAPA 498
Query: 272 LPGYSPSSTGQYT 234
P YS S Y+
Sbjct: 499 APSYSASKGPSYS 511
Score = 75.5 bits (184), Expect = 3e-12
Identities = 57/137 (41%), Positives = 76/137 (55%), Gaps = 18/137 (13%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASPYS-P 420
+P +P YS P +PSYS P +PSY P +PSY SA PS + + +PA YS P
Sbjct: 410 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSY---SAPKGPSYSAPADPSYSAPAQSYSAP 466
Query: 419 TSPNYS-PTSPSYS-PTSPSYSPSSPTYS-PSSP---------YSSGASPDYS-PSAGYS 279
+P+YS P PSYS P +PSYS + +YS P++P YS+ A+P YS P+ YS
Sbjct: 467 AAPSYSAPKGPSYSAPAAPSYSAPAQSYSAPAAPSYSASKGPSYSAPAAPSYSAPAQSYS 526
Query: 278 -PTLPGYSPSSTGQYTP 231
P P YS + P
Sbjct: 527 APAAPSYSAPAQSYSAP 543
Score = 74.3 bits (181), Expect = 7e-12
Identities = 56/133 (42%), Positives = 77/133 (57%), Gaps = 14/133 (10%)
Frame = -3
Query: 590 YSPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYS----PSIAYSPSNARLSPAS 432
YS + YS P +PSYS P PSY P +PSY+ + YS PS + S + +PA+
Sbjct: 456 YSAPAQSYSAPAAPSYSAPKGPSYSAPAAPSYSAPAQSYSAPAAPSYSASKGPSYSAPAA 515
Query: 431 P-YSPTSPNYS-PTSPSYSPTSPSYS-PSSPTYS-PSSP-YSSGASPDYS-PSAGYS-PT 273
P YS + +YS P +PSYS + SYS P++P+YS P++P YS+ P YS P+ YS P
Sbjct: 516 PSYSAPAQSYSAPAAPSYSAPAQSYSAPAAPSYSAPAAPSYSAPKGPSYSAPAQSYSAPA 575
Query: 272 LPGYSPSSTGQYT 234
P YS Y+
Sbjct: 576 APSYSAPKAPVYS 588
Score = 72.8 bits (177), Expect = 2e-11
Identities = 53/129 (41%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYSPTSPSYG-PTSPSYN-PQSAKYSPSIAYS---PSNARLSPASP- 429
+P P YS P PSYS + SY P +PSY+ P+ YS A S P+ + +PA+P
Sbjct: 442 APKGPSYSAPADPSYSAPAQSYSAPAAPSYSAPKGPSYSAPAAPSYSAPAQSYSAPAAPS 501
Query: 428 YSPTS-PNYS-PTSPSYSPTSPSYS-PSSPTYS-PSSPYSSGASPDYSPSAGYSPTLPGY 261
YS + P+YS P +PSYS + SYS P++P+YS P+ YS+ A+P YS +P P Y
Sbjct: 502 YSASKGPSYSAPAAPSYSAPAQSYSAPAAPSYSAPAQSYSAPAAPSYS-----APAAPSY 556
Query: 260 SPSSTGQYT 234
S Y+
Sbjct: 557 SAPKGPSYS 565
Score = 70.9 bits (172), Expect = 7e-11
Identities = 56/131 (42%), Positives = 79/131 (60%), Gaps = 12/131 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
Y+ S +P +PSYS P +P+Y P +PSY SA +PS + +PA+P YS
Sbjct: 63 YNSKSSYSAPAAPSYSAPKAPTYSAPAAPSY---SAPAAPSYS--------APAAPSYSA 111
Query: 422 PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYSPSAGYS---PTLP 267
P +P+YS P +PSYS P +PSYS P++P+YS P++P YS+ A+P YS A S P P
Sbjct: 112 PAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAP 171
Query: 266 GYSPSSTGQYT 234
YS + Y+
Sbjct: 172 SYSAPAAPSYS 182
Score = 68.6 bits (166), Expect = 4e-10
Identities = 52/132 (39%), Positives = 70/132 (53%), Gaps = 15/132 (11%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYS-PTSPSYG---------PTSPSYNPQSAKYSPSIAYSPSNARLSP 438
+P +P YS + SYS P +PSY P +PSY+ + YS A S S +P
Sbjct: 481 APAAPSYSAPAQSYSAPAAPSYSASKGPSYSAPAAPSYSAPAQSYSAPAAPSYS----AP 536
Query: 437 ASPYS-PTSPNYS-PTSPSYS-PTSPSYSPSSPTYS-PSSP-YSSGASPDYSPSAGYSPT 273
A YS P +P+YS P +PSYS P PSYS + +YS P++P YS+ +P YS P
Sbjct: 537 AQSYSAPAAPSYSAPAAPSYSAPKGPSYSAPAQSYSAPAAPSYSAPKAPVYS-----VPV 591
Query: 272 LPGYSPSSTGQY 237
P YS + Y
Sbjct: 592 APSYSAPAAPSY 603
Score = 61.6 bits (148), Expect = 4e-08
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 10/94 (10%)
Frame = -3
Query: 485 YSPSIAYSPSNARLSPASP-YS-PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP- 327
Y P I Y+ ++ +PA+P YS P +P YS P +PSYS P +PSYS P++P+YS P++P
Sbjct: 57 YGPPIIYNSKSSYSAPAAPSYSAPKAPTYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPS 116
Query: 326 YSSGASPDYSPSAGYS---PTLPGYSPSSTGQYT 234
YS+ A+P YS A S P P YS + Y+
Sbjct: 117 YSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYS 150
Score = 56.6 bits (135), Expect = 1e-06
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 8/96 (8%)
Frame = -3
Query: 497 QSAKYSPSIAYSPSNARLSPASPYSPTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSS 330
+S++ P AY P S +S +P +P+YS P +P+YS P +PSYS P++P+YS P++
Sbjct: 47 RSSQRIPLQAYGPPIIYNSKSSYSAPAAPSYSAPKAPTYSAPAAPSYSAPAAPSYSAPAA 106
Query: 329 P-YSSGASPDYSPSAGYS---PTLPGYSPSSTGQYT 234
P YS+ A+P YS A S P P YS + Y+
Sbjct: 107 PSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYS 142
[230][TOP]
>UniRef100_UPI0000F3065A UPI0000F3065A related cluster n=1 Tax=Bos taurus
RepID=UPI0000F3065A
Length = 540
Score = 83.6 bits (205), Expect = 1e-14
Identities = 42/97 (43%), Positives = 51/97 (52%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNY 405
P SPG+ P SP + P SP + P SP + +S + P SP A SP S SP++
Sbjct: 60 PQSPGFGPQSPEFEPQSPRFEPESPGFESRSPGFVPP---SPEFAPRSPES--DSQSPDF 114
Query: 404 SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP 294
P SP Y P SP Y P SP Y P SP SP+Y P
Sbjct: 115 EPQSPRYEPQSPGYEPKSPGYEPRSPGYGTQSPEYEP 151
Score = 81.6 bits (200), Expect = 4e-14
Identities = 39/99 (39%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNAR-LSPASP-YSPT 417
+ P SP + P SP + P SP + SP + P S +++P S S + P SP Y P
Sbjct: 65 FGPQSPEFEPQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDSQSPDFEPQSPRYEPQ 124
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 300
SP Y P SP Y P SP Y SP Y P +P SP++
Sbjct: 125 SPGYEPKSPGYEPRSPGYGTQSPEYEPQNPEFKTQSPEF 163
Score = 77.0 bits (188), Expect = 1e-12
Identities = 38/103 (36%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKY-SPSIAYSPSNARLSPASP-YSPT 417
+ P SP + P SP + SP + P SP + P+S + S S + P + R P SP Y P
Sbjct: 72 FEPQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDSQSPDFEPQSPRYEPQSPGYEPK 131
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA 288
SP Y P SP Y SP Y P +P + SP S + A
Sbjct: 132 SPGYEPRSPGYGTQSPEYEPQNPEFKTQSPEFEAESSKFQEGA 174
Score = 58.2 bits (139), Expect = 5e-07
Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 28/106 (26%)
Frame = -3
Query: 422 PTSPNYSPTSPSYSPTSPSYSPS--------------SPTYSPSSPYSSGASPDYSP--- 294
P SP + P SP + P SP + P SP ++P SP S SPD+ P
Sbjct: 60 PQSPGFGPQSPEFEPQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDSQSPDFEPQSP 119
Query: 293 -----SAGYSPTLPGYSPSSTG------QYTPHEGDKKDKTGKKDA 189
S GY P PGY P S G +Y P + K ++ + +A
Sbjct: 120 RYEPQSPGYEPKSPGYEPRSPGYGTQSPEYEPQNPEFKTQSPEFEA 165
[231][TOP]
>UniRef100_A9SW33 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SW33_PHYPA
Length = 284
Score = 83.6 bits (205), Expect = 1e-14
Identities = 52/100 (52%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSA-KYSPSIAYSPSNARLSPASP-YSPTSP 411
P SP Y SP Y+ SP Y SP Y+P K PS YSPS SP SP YSP+
Sbjct: 139 PESPVYE--SPPYASPSPVY--ESPPYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPV 194
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 291
SP SP+YSP+ SP SPTYSPS Y S SP YSPS
Sbjct: 195 YKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPSYSPS 234
Score = 82.8 bits (203), Expect = 2e-14
Identities = 57/134 (42%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNY 405
PT P P S SP Y SP Y +S YSPS Y SP SP Y
Sbjct: 130 PTLPSCPPPPESPVYESPPYASPSPVY--ESPPYSPSPVYK------------SPPSPTY 175
Query: 404 SPTSPSYSPTSPSYSPS-------SPTYSPSSPYSSGASPDYSPSAGY-SPTLPGYSPSS 249
SP+ SP SP+YSPS SPTYSPS Y S SP YSPS Y SP P YSPS
Sbjct: 176 SPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPSYSPSP 235
Query: 248 TGQYTPHEGDKKDK 207
+E + D+
Sbjct: 236 QNCLMNNEVSRMDR 249
Score = 65.1 bits (157), Expect = 4e-09
Identities = 36/86 (41%), Positives = 46/86 (53%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
YSP+ SP SP+YSP+ P SP+Y+P SP P+ YSP+
Sbjct: 161 YSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSP------------PSPTYSPSPV 208
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPS 333
SP SP+YSP+ SP SP+YSPS
Sbjct: 209 YKSPPSPTYSPSPVYKSPPSPSYSPS 234
[232][TOP]
>UniRef100_C5Y8R4 Putative uncharacterized protein Sb06g017200 n=1 Tax=Sorghum
bicolor RepID=C5Y8R4_SORBI
Length = 367
Score = 82.8 bits (203), Expect = 2e-14
Identities = 55/160 (34%), Positives = 76/160 (47%), Gaps = 46/160 (28%)
Frame = -3
Query: 590 YSPTSPGYSPT---------SPSYSPTSPSYGPTSPS--------YNPQSAKYSPSIA-- 468
YSP SP Y+P SP YSP +P Y P +PS Y+P S +Y+P +
Sbjct: 110 YSPASPEYTPLLKPSSRRFGSPDYSPATPEYTPLTPSSQRSGSPVYSPASPEYTPLLTPS 169
Query: 467 --------YSPSNARLSPASP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYS 339
YSP++ +P +P YSP SP Y+P +P SP+Y+P++ Y+
Sbjct: 170 SRRFGSPDYSPASPEYTPLTPSSQRSGSPVYSPGSPEYTPLTPPKRSGSPAYTPAAANYT 229
Query: 338 PSSPYSSGASPDY--------SPSAGYS--PTLPGYSPSS 249
P SP SS S + SPS G S P Y+P+S
Sbjct: 230 PRSPSSSSLSDFFHDFDRHCTSPSTGCSSRAVSPEYTPAS 269
Score = 79.3 bits (194), Expect = 2e-13
Identities = 61/171 (35%), Positives = 77/171 (45%), Gaps = 58/171 (33%)
Frame = -3
Query: 590 YSPTSPGYSPTSPS--------YSPTSPSYGPT---------SPSYNPQSAKYSP----- 477
YSP +P Y+P +PS YSP SP Y P SP Y+P S +Y+P
Sbjct: 133 YSPATPEYTPLTPSSQRSGSPVYSPASPEYTPLLTPSSRRFGSPDYSPASPEYTPLTPSS 192
Query: 476 ----SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSP------------TSP 369
S YSP + +P +P Y+P + NY+P SPS S TSP
Sbjct: 193 QRSGSPVYSPGSPEYTPLTPPKRSGSPAYTPAAANYTPRSPSSSSLSDFFHDFDRHCTSP 252
Query: 368 SYSPSS----PTYSPSSPYSSGASPDY------SPSAGYSP--TLPGYSPS 252
S SS P Y+P+S + PDY PSAGYSP P Y+PS
Sbjct: 253 STGCSSRAVSPEYTPASASGCCSPPDYFFCYTSPPSAGYSPRDASPEYTPS 303
Score = 74.3 bits (181), Expect = 7e-12
Identities = 51/133 (38%), Positives = 67/133 (50%), Gaps = 17/133 (12%)
Frame = -3
Query: 578 SPGYSPTS---PSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT--- 417
SP Y+P S S SP Y P +P S++ S S YSP++ +P S
Sbjct: 70 SPDYTPGSLDCSSQRSGSPDYSPATPDPATPSSQRSGSPVYSPASPEYTPLLKPSSRRFG 129
Query: 416 SPNYSPTSPSYSPTSPS--------YSPSSPTYSPSSPYSSG--ASPDYSP-SAGYSPTL 270
SP+YSP +P Y+P +PS YSP+SP Y+P SS SPDYSP S Y+P
Sbjct: 130 SPDYSPATPEYTPLTPSSQRSGSPVYSPASPEYTPLLTPSSRRFGSPDYSPASPEYTPLT 189
Query: 269 PGYSPSSTGQYTP 231
P S + Y+P
Sbjct: 190 PSSQRSGSPVYSP 202
Score = 74.3 bits (181), Expect = 7e-12
Identities = 64/191 (33%), Positives = 83/191 (43%), Gaps = 69/191 (36%)
Frame = -3
Query: 590 YSPTSPGYSPT---------SPSYSPTSPSYGPTSPS--------YNPQSAKYSP----- 477
YSP SP Y+P SP YSP SP Y P +PS Y+P S +Y+P
Sbjct: 155 YSPASPEYTPLLTPSSRRFGSPDYSPASPEYTPLTPSSQRSGSPVYSPGSPEYTPLTPPK 214
Query: 476 ---SIAYSPSNARLSPASPYSPT------------------------SPNYSPTS----- 393
S AY+P+ A +P SP S + SP Y+P S
Sbjct: 215 RSGSPAYTPAAANYTPRSPSSSSLSDFFHDFDRHCTSPSTGCSSRAVSPEYTPASASGCC 274
Query: 392 --PSY-----SPTSPSYSP--SSPTYSPSSPYSS----GASPDYSPSAG--YSPTLPGYS 258
P Y SP S YSP +SP Y+PS P S ASPDY+PS+ S + S
Sbjct: 275 SPPDYFFCYTSPPSAGYSPRDASPEYTPSIPLISLPRRAASPDYTPSSPSVVSDAVSRTS 334
Query: 257 PSSTGQYTPHE 225
P S ++ P++
Sbjct: 335 PPSHRRFHPYQ 345
[233][TOP]
>UniRef100_B3MYU2 GF22208 n=1 Tax=Drosophila ananassae RepID=B3MYU2_DROAN
Length = 563
Score = 82.4 bits (202), Expect = 2e-14
Identities = 59/129 (45%), Positives = 82/129 (63%), Gaps = 10/129 (7%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSP-ASPYS- 423
+P +P YS P +PSYS P +PSY P +PSY+ +A +PS + S+ +P AS YS
Sbjct: 192 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAA-APSYSAPASSGYSAPKASSYSA 250
Query: 422 PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYSPSAGYSPTLPGYS 258
P +P+YS P +PSYS P +PSYS P++P+YS P +P YS+ A+P YS A S + P S
Sbjct: 251 PAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPKAPSYSAPAAPSYSAPAAPSYSAPAAS 310
Query: 257 PSSTGQYTP 231
PS + P
Sbjct: 311 PSYSASAAP 319
Score = 76.6 bits (187), Expect = 1e-12
Identities = 55/129 (42%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYN-PQSAKYSPSIAYSPSNARLSPASPYSP 420
+P +P YS P +PSYS P +PSY P +PSY+ P + YS A S S SP+ S
Sbjct: 258 APAAPSYSAPAAPSYSAPAAPSYSAPKAPSYSAPAAPSYSAPAAPSYSAPAASPSYSASA 317
Query: 419 TSPNYSPTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYSPSAGYS---PTLPGY 261
+P +PSYS P +PSYS P++P+YS P++P YS+ A+P YS A S P P Y
Sbjct: 318 APAYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSY 377
Query: 260 SPSSTGQYT 234
S + Y+
Sbjct: 378 SAPAAPAYS 386
Score = 74.7 bits (182), Expect = 5e-12
Identities = 58/136 (42%), Positives = 81/136 (59%), Gaps = 26/136 (19%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP---- 429
+P +P YS P +PSYS P +PSY P +PSY+ +A SPS + S + A +PA+P
Sbjct: 274 APAAPSYSAPKAPSYSAPAAPSYSAPAAPSYSAPAA--SPSYSASAAPAYSAPAAPSYSA 331
Query: 428 -------------YS-PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASP 306
YS P +P+YS P +PSYS P +PSYS P++P+YS P++P YS+ A+P
Sbjct: 332 PAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPAYSAPAAP 391
Query: 305 DYSPSAGYSPTLPGYS 258
YS +P P YS
Sbjct: 392 SYS-----APAAPAYS 402
Score = 72.8 bits (177), Expect = 2e-11
Identities = 60/142 (42%), Positives = 81/142 (57%), Gaps = 23/142 (16%)
Frame = -3
Query: 587 SPTSPGYS---------PTSPSYS-PTSPSYG-PTSPSYN-PQSAKYSPSIAYSPSNARL 444
+P S GYS P +PSYS P +PSY P +PSY+ P + YS A S S A
Sbjct: 103 APASSGYSAPKASSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYS-APA 161
Query: 443 SPASPYSPTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYSPSAGYS 279
+P+ +P+YS P +PSYS P +PSYS P++P+YS P++P YS+ A+P YS A S
Sbjct: 162 APSYSAPAAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPS 221
Query: 278 -----PTLPGYS-PSSTGQYTP 231
P YS P+S+G P
Sbjct: 222 YSAPAAAAPSYSAPASSGYSAP 243
Score = 72.8 bits (177), Expect = 2e-11
Identities = 60/157 (38%), Positives = 80/157 (50%), Gaps = 22/157 (14%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSY-GPTSPSYN---------PQSAKYSPSIAYSPSNARL 444
+P +P YS P +PSYS P +PSY P +PSY+ P + YS A + S +
Sbjct: 347 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPAYSAPAAPSYSAPAAPAYSAPKA 406
Query: 443 SPASPYS-PTSPNYS---PTSPSYS-PTSPSYS-PSSPTY----SPSSPYSSGASPDYSP 294
+ A YS P +P+YS P+S SYS P +PSYS P++P Y S SS YS+ AS YS
Sbjct: 407 AAAPSYSAPAAPSYSAPAPSSSSYSAPAAPSYSAPAAPPYSAPASSSSSYSAPASSSYSA 466
Query: 293 SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASK 183
A S + P S S +P +G SK
Sbjct: 467 PASSSYSAPKASSYSAPSSSPSYSAPASSSGYSAPSK 503
Score = 72.4 bits (176), Expect = 3e-11
Identities = 58/147 (39%), Positives = 83/147 (56%), Gaps = 29/147 (19%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYGP---TSPSYN---------PQSAKYS----PSIAYS 462
+P +P YS P +PSYS P +PSY +PSY+ P+++ YS PS +
Sbjct: 200 APAAPSYSAPAAPSYSAPAAPSYSAPAAAAPSYSAPASSGYSAPKASSYSAPAAPSYSAP 259
Query: 461 PSNARLSPASP-YS-PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYSP---SSPYSSGASP 306
+ + +PA+P YS P +P+YS P +PSYS P +PSYS P++P+YS S YS+ A+P
Sbjct: 260 AAPSYSAPAAPSYSAPAAPSYSAPKAPSYSAPAAPSYSAPAAPSYSAPAASPSYSASAAP 319
Query: 305 DYSPSAGYS---PTLPGYSPSSTGQYT 234
YS A S P P YS + Y+
Sbjct: 320 AYSAPAAPSYSAPAAPSYSAPAAPSYS 346
Score = 72.0 bits (175), Expect = 3e-11
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 15/128 (11%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P +P YS P +PSYS P +PSY P +PSY SA +PS + + + +PA+P YS
Sbjct: 331 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSY---SAPAAPSYSAPAAPSYSAPAAPAYSA 387
Query: 422 PTSPNYS-PTSPSYSP----TSPSYS-PSSPTYS----PSSPYSSGASPDYSPSAGYSPT 273
P +P+YS P +P+YS +PSYS P++P+YS SS YS+ A+P YS A +
Sbjct: 388 PAAPSYSAPAAPAYSAPKAAAAPSYSAPAAPSYSAPAPSSSSYSAPAAPSYSAPAAPPYS 447
Query: 272 LPGYSPSS 249
P S SS
Sbjct: 448 APASSSSS 455
Score = 71.2 bits (173), Expect = 6e-11
Identities = 57/131 (43%), Positives = 75/131 (57%), Gaps = 13/131 (9%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYN-PQSAKYSPSIAYSPSNARLSPASPYSP 420
+P S GYS P + SYS P +PSY P +PSY+ P + YS A PS + S +P
Sbjct: 234 APASSGYSAPKASSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAA--PSYSAPKAPSYSAP 291
Query: 419 TSPNYS-PTSPSYSP--TSPSYSPSS-PTYS-PSSP-YSSGASPDYSPSAGYS---PTLP 267
+P+YS P +PSYS SPSYS S+ P YS P++P YS+ A+P YS A S P P
Sbjct: 292 AAPSYSAPAAPSYSAPAASPSYSASAAPAYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAP 351
Query: 266 GYSPSSTGQYT 234
YS + Y+
Sbjct: 352 SYSAPAAPSYS 362
Score = 70.1 bits (170), Expect = 1e-10
Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 14/132 (10%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P +P YS P S YS P + SY P +PSY SA +PS + + + +PA+P YS
Sbjct: 95 APAAPSYSAPASSGYSAPKASSYSAPAAPSY---SAPAAPSYSAPAAPSYSAPAAPSYSA 151
Query: 422 PTSPNYS-PTSPSYSP--TSPSYS-PSSPTYS-PSSP-YSSGASPDYSPSAGYS---PTL 270
P +P+YS P +PSYS +PSYS P++P+YS P++P YS+ A+P YS A S P
Sbjct: 152 PAAPSYSAPAAPSYSAPAAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAA 211
Query: 269 PGYSPSSTGQYT 234
P YS + Y+
Sbjct: 212 PSYSAPAAPSYS 223
Score = 69.3 bits (168), Expect = 2e-10
Identities = 56/134 (41%), Positives = 77/134 (57%), Gaps = 16/134 (11%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYSP--TSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS 423
+P +P YS P +PSYS +PSY P +PSY SA +PS + + + +PA+P YS
Sbjct: 151 APAAPSYSAPAAPSYSAPAAAPSYSAPAAPSY---SAPAAPSYSAPAAPSYSAPAAPSYS 207
Query: 422 -PTSPNYS-PTSPSYS---PTSPSYS-PSSPTYS--PSSPYSSGASPDYSPSAGYS---P 276
P +P+YS P +PSYS +PSYS P+S YS +S YS+ A+P YS A S P
Sbjct: 208 APAAPSYSAPAAPSYSAPAAAAPSYSAPASSGYSAPKASSYSAPAAPSYSAPAAPSYSAP 267
Query: 275 TLPGYSPSSTGQYT 234
P YS + Y+
Sbjct: 268 AAPSYSAPAAPSYS 281
Score = 68.6 bits (166), Expect = 4e-10
Identities = 57/141 (40%), Positives = 83/141 (58%), Gaps = 26/141 (18%)
Frame = -3
Query: 578 SPGYSPT-SPSYS-PTSPSY-GPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS-PTS 414
SP YS + +P+YS P +PSY P +PSY SA +PS + + + +PA+P YS P +
Sbjct: 310 SPSYSASAAPAYSAPAAPSYSAPAAPSY---SAPAAPSYSAPAAPSYSAPAAPSYSAPAA 366
Query: 413 PNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP------------YSSGASPDYS----P 294
P+YS P +PSYS P +P+YS P++P+YS P++P YS+ A+P YS
Sbjct: 367 PSYSAPAAPSYSAPAAPAYSAPAAPSYSAPAAPAYSAPKAAAAPSYSAPAAPSYSAPAPS 426
Query: 293 SAGYS-PTLPGYSPSSTGQYT 234
S+ YS P P YS + Y+
Sbjct: 427 SSSYSAPAAPSYSAPAAPPYS 447
Score = 68.2 bits (165), Expect = 5e-10
Identities = 55/139 (39%), Positives = 80/139 (57%), Gaps = 21/139 (15%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYG-PTSPSYN-PQSAKYSPSIAYSPSNARLSPASP-YS-P 420
+P +P +P+ + + +PSY P +PSY+ P S+ YS A S S +PA+P YS P
Sbjct: 73 APVAPAPAPSYSAPAAPAPSYSAPAAPSYSAPASSGYSAPKASSYS----APAAPSYSAP 128
Query: 419 TSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP----------YSSGASPDYSPSAGY 282
+P+YS P +PSYS P +PSYS P++P+YS P++P YS+ A+P YS A
Sbjct: 129 AAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAAPSYSAPAAPSYSAPAAP 188
Query: 281 S---PTLPGYSPSSTGQYT 234
S P P YS + Y+
Sbjct: 189 SYSAPAAPSYSAPAAPSYS 207
Score = 65.1 bits (157), Expect = 4e-09
Identities = 58/153 (37%), Positives = 78/153 (50%), Gaps = 36/153 (23%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYN-PQSAKYSPSIAYSPSNARLSPASPYS- 423
+P +P YS P +PSYS P +PSY P +P+Y+ P + YS A + S + + A YS
Sbjct: 355 APAAPSYSAPAAPSYSAPAAPSYSAPAAPAYSAPAAPSYSAPAAPAYSAPKAAAAPSYSA 414
Query: 422 PTSPNYS---PTSPSYS-PTSPSYS-PSSPTYSP------------SSPYSSGAS----- 309
P +P+YS P+S SYS P +PSYS P++P YS SS YS+ AS
Sbjct: 415 PAAPSYSAPAPSSSSYSAPAAPSYSAPAAPPYSAPASSSSSYSAPASSSYSAPASSSYSA 474
Query: 308 --------PDYSPSAGYSPTLPGYS-PSSTGQY 237
P SPS + GYS PS + Y
Sbjct: 475 PKASSYSAPSSSPSYSAPASSSGYSAPSKSSGY 507
Score = 61.2 bits (147), Expect = 6e-08
Identities = 48/114 (42%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Frame = -3
Query: 587 SPTSPGYSP----TSPSYS-PTSPSYGPTSPSYNPQSAKYSPSI---AYSPSNARLSPAS 432
+P +P YS +PSYS P +PSY +PS + SA +PS A P +A S +S
Sbjct: 395 APAAPAYSAPKAAAAPSYSAPAAPSYSAPAPSSSSYSAPAAPSYSAPAAPPYSAPASSSS 454
Query: 431 PYS-PTSPNYS-PTSPSYS-PTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYS 279
YS P S +YS P S SYS P + SYS S + S S+P SS S S+GY+
Sbjct: 455 SYSAPASSSYSAPASSSYSAPKASSYSAPSSSPSYSAPASSSGYSAPSKSSGYA 508
Score = 58.5 bits (140), Expect = 4e-07
Identities = 45/129 (34%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYS- 402
SP + SYS G +P + YS A +PS + + S +P S YS
Sbjct: 52 SPVVYNSQASYSAPKAQGGYAAPVAPAPAPSYSAPAAPAPSYSAPAAPSYSAPASSGYSA 111
Query: 401 --------PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYSPSAGYSPTLPGYS 258
P +PSYS P +PSYS P++P+YS P++P YS+ A+P YS A S + P +
Sbjct: 112 PKASSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAA 171
Query: 257 PSSTGQYTP 231
PS + P
Sbjct: 172 PSYSAPAAP 180
[234][TOP]
>UniRef100_A7TTU2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Vanderwaltozyma
polyspora DSM 70294 RepID=A7TTU2_VANPO
Length = 1311
Score = 82.4 bits (202), Expect = 2e-14
Identities = 48/108 (44%), Positives = 62/108 (57%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYS 402
+SPG+SPTSP+YSPTSPSY PTSPSY+P S YS + +S YSPTSP+YS
Sbjct: 1221 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSTSYSQT------------SSSYSPTSPSYS 1268
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYS 258
+ ++P P P P+SPY+S S ++ T P YS
Sbjct: 1269 -QNLHHTPKIPILFRQLPHKFPNSPYNSQPSQ-------FTSTFPLYS 1308
Score = 77.0 bits (188), Expect = 1e-12
Identities = 47/105 (44%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Frame = -3
Query: 569 YSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAY--SPSNARLSPASP--YSPTSPNYS 402
+SP S S + + G T+ SP AY SPS+ S +SPTSP YS
Sbjct: 1174 FSPLVDSGSTDAMAGGFTAYGGADYGGATSPFTAYGESPSSPGFGGVSSPGFSPTSPAYS 1233
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLP 267
PTSPSYSPTSPSYSP+S +YS +S S SP YS + ++P +P
Sbjct: 1234 PTSPSYSPTSPSYSPTSTSYSQTSSSYSPTSPSYSQNLHHTPKIP 1278
Score = 72.8 bits (177), Expect = 2e-11
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARL-------SPAS 432
YSPTSP YSPTSPSYSPTS SY TS SY+P S YS ++ ++P L P S
Sbjct: 1232 YSPTSPSYSPTSPSYSPTSTSYSQTSSSYSPTSPSYSQNLHHTPKIPILFRQLPHKFPNS 1291
Query: 431 PYSPTSPNYSPTSPSYS 381
PY+ ++ T P YS
Sbjct: 1292 PYNSQPSQFTSTFPLYS 1308
[235][TOP]
>UniRef100_UPI0000DD9478 Os08g0268000 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000DD9478
Length = 270
Score = 82.0 bits (201), Expect = 3e-14
Identities = 53/137 (38%), Positives = 73/137 (53%), Gaps = 20/137 (14%)
Frame = -3
Query: 581 TSPGYSPTSPSY--SP---TSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT 417
+SPGY+P+SP SP SP Y P++P S Y+PS +P A +P +PT
Sbjct: 50 SSPGYTPSSPMVMGSPRRAASPDYTPSTPPRRAASPDYTPSTPTTPRRAASPDYTPSTPT 109
Query: 416 ------SPNYSPTSPSYSPTSPSYSPSSPT---------YSPSSPYSSGASPDYSPSAGY 282
SP+Y+P++P SP Y+PS+PT Y+PS+P ASPDY+PS
Sbjct: 110 PPRRAASPDYTPSTPPPRAASPDYTPSTPTPPRRAASPNYTPSTPQRHAASPDYTPS--- 166
Query: 281 SPTLPGYSPSSTGQYTP 231
+PT P + S YTP
Sbjct: 167 TPTPPRRAASL--DYTP 181
Score = 71.6 bits (174), Expect = 4e-11
Identities = 48/153 (31%), Positives = 69/153 (45%), Gaps = 38/153 (24%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPT---------SPSYGPTSPSYNPQSAK--YSPSI----AYSPS 456
Y+P++P SP Y+P+ SP Y P++P+ ++A Y+PS A SP
Sbjct: 73 YTPSTPPRRAASPDYTPSTPTTPRRAASPDYTPSTPTPPRRAASPDYTPSTPPPRAASPD 132
Query: 455 NARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPT----------------------- 345
+P P SPNY+P++P SP Y+PS+PT
Sbjct: 133 YTPSTPTPPRRAASPNYTPSTPQRHAASPDYTPSTPTPPRRAASLDYTPSTPPPRAASPD 192
Query: 344 YSPSSPYSSGASPDYSPSAGYSPTLPGYSPSST 246
Y+P SP ASP+YSPS +P + S T
Sbjct: 193 YTPLSPPPRAASPEYSPSTPPPSPVPSDAESGT 225
[236][TOP]
>UniRef100_UPI000069F9E1 UPI000069F9E1 related cluster n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI000069F9E1
Length = 153
Score = 82.0 bits (201), Expect = 3e-14
Identities = 41/86 (47%), Positives = 59/86 (68%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNY 405
PTSP + PT ++ PTSP++ PTSP++ P S + P+ S+A P SP PTSP +
Sbjct: 68 PTSPTHFPTRHAHFPTSPAHFPTSPAHFPTSPTHFPT-----SHAHF-PTSPSHPTSPAH 121
Query: 404 SPTSPSYSPTSPSYSPSSPTYSPSSP 327
PTSP++ PTSP++ P+SPT+ P+SP
Sbjct: 122 FPTSPTHFPTSPAHFPTSPTHFPTSP 147
Score = 77.4 bits (189), Expect = 8e-13
Identities = 40/86 (46%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YSPTSPN 408
PT + PTSP++ PTSP++ PTSP++ P S + P+ SPS+ P SP + PTSP
Sbjct: 75 PTRHAHFPTSPAHFPTSPAHFPTSPTHFPTSHAHFPT---SPSH----PTSPAHFPTSPT 127
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSS 330
+ PTSP++ PTSP++ P+SP + P+S
Sbjct: 128 HFPTSPAHFPTSPTHFPTSPAHFPTS 153
Score = 68.2 bits (165), Expect = 5e-10
Identities = 44/120 (36%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Frame = -3
Query: 575 PGYSPTSPSYSPTSPSYGP--TSP----SYNPQSAKYSPSIAYSPSNARLSPASP-YSPT 417
P SPT P P +P GP TSP N + S A + SN P SP + PT
Sbjct: 18 PAVSPTPPG-PPLTPPQGPHPTSPLSAYKLNASGQEQSEGGAPAKSNPAHFPTSPTHFPT 76
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQY 237
+ PTSP++ PTSP++ P+SPT+ P+S SP + S + PT P + P+S +
Sbjct: 77 RHAHFPTSPAHFPTSPAHFPTSPTHFPTSHAHFPTSPSHPTSPAHFPTSPTHFPTSPAHF 136
Score = 68.2 bits (165), Expect = 5e-10
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Frame = -3
Query: 581 TSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYS 402
++P + PTSP++ PT ++ PTSP++ P S PA + PTSP +
Sbjct: 62 SNPAHFPTSPTHFPTRHAHFPTSPAHFPTS-----------------PA--HFPTSPTHF 102
Query: 401 PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 249
PTS ++ PTSPS+ P+SP + P+SP SP + P S + PT P + P+S
Sbjct: 103 PTSHAHFPTSPSH-PTSPAHFPTSPTHFPTSPAHFPTSPTHFPTSPAHFPTS 153
[237][TOP]
>UniRef100_Q4D199 Putative uncharacterized protein n=1 Tax=Trypanosoma cruzi
RepID=Q4D199_TRYCR
Length = 320
Score = 82.0 bits (201), Expect = 3e-14
Identities = 42/124 (33%), Positives = 47/124 (37%), Gaps = 3/124 (2%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYN-PQSAKYSPSIAY-SPSNARLSPASPYSPT 417
Y P PGY P Y P P YG P Y PQ SP Y +P +P Y
Sbjct: 12 YGPPQPGYGAPQPGYGPPQPGYGAPQPGYGAPQPEYGSPQPGYGAPQPGYGAPQPEYGSP 71
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS-PSAGYSPTLPGYSPSSTGQ 240
P Y P Y P Y P P Y P P P Y P GY P P Y ++G
Sbjct: 72 QPGYGAPQPGYGAPQPGYGPPQPEYGPPQPGYGAPQPGYGPPQPGYGPPQPEYGKPASGN 131
Query: 239 YTPH 228
P+
Sbjct: 132 ALPY 135
[238][TOP]
>UniRef100_C6ZIW1 RNA polymerase II (Fragment) n=1 Tax=Plasmodium ovale
RepID=C6ZIW1_9APIC
Length = 168
Score = 82.0 bits (201), Expect = 3e-14
Identities = 57/152 (37%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Frame = -3
Query: 590 YSPTSP-----GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPY 426
YSPTSP G T+ Y+ SP Y TSP Y+P S +YSP+ P+N P+SP+
Sbjct: 24 YSPTSPKNHITGDVHTNMKYNVMSPVYSVTSPKYSPTSPQYSPTSPV-PNN----PSSPH 78
Query: 425 SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSST 246
SP YS TSP +SPTSP+YS SSP Y ++P + P P Y S
Sbjct: 79 SPHYSPYSITSPKFSPTSPAYSISSPVYDKNAPINK------------HPLSPAYILQSP 126
Query: 245 GQYTPHEGDKK-----DKTGKKDASKDDKGNP 165
Q H D + DA DD +P
Sbjct: 127 VQVKQHIQDVHMFSPIQQANANDAQNDDPFSP 158
Score = 78.2 bits (191), Expect = 5e-13
Identities = 47/103 (45%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Frame = -3
Query: 548 YSPTSPSYGPTSPSYNPQS--AKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPT 375
YSPTSP+Y + + Q+ A YSP+ + + Y+ SP YS TSP YSPT
Sbjct: 1 YSPTSPTYNASHANQANQANTAYYSPTSPKNHITGDVHTNMKYNVMSPVYSVTSPKYSPT 60
Query: 374 SPSYSPSSPT-YSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
SP YSP+SP +PSSP+S SP S +SPT P YS SS
Sbjct: 61 SPQYSPTSPVPNNPSSPHSPHYSPYSITSPKFSPTSPAYSISS 103
[239][TOP]
>UniRef100_Q8R0T2 Zinc finger protein 768 n=1 Tax=Mus musculus RepID=ZN768_MOUSE
Length = 568
Score = 81.6 bits (200), Expect = 4e-14
Identities = 42/117 (35%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
+ P SPG+ SP + P SP + P SP +PQS ++ SP
Sbjct: 82 FEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQ-------------------SP 122
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY-SPSAGYSPTLPGYSPSSTG 243
Y P SP P SP P SP Y P SP SP++ S S GY PGY P ++G
Sbjct: 123 KYEPRSPGCHPRSPGCEPGSPRYEPKSPGYGSKSPEFESQSPGYESQSPGYEPQNSG 179
[240][TOP]
>UniRef100_A0E2M3 Chromosome undetermined scaffold_75, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0E2M3_PARTE
Length = 288
Score = 80.9 bits (198), Expect = 7e-14
Identities = 49/127 (38%), Positives = 51/127 (40%), Gaps = 6/127 (4%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQ----SAKYSPSIAYSPSNARLSPASP-YSP 420
P PGY P P Y P P Y PT P Y PQ + Y Y P P P Y P
Sbjct: 149 PPQPGYPPQQP-YPPQQPGY-PTQPGYPPQPGYPAQPYPQQPGYPPQQPGYPPQQPGYPP 206
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTG 243
P Y P P Y P P Y P P Y P P P Y P GY P PGY
Sbjct: 207 QQPGYPPQQPGYPP-QPGYPPQQPGYPPQQPGYPPQQPGYPPQQPGYPPQQPGYPAQ--- 262
Query: 242 QYTPHEG 222
QY P +G
Sbjct: 263 QYPPQQG 269
Score = 76.6 bits (187), Expect = 1e-12
Identities = 42/112 (37%), Positives = 43/112 (38%), Gaps = 4/112 (3%)
Frame = -3
Query: 584 PTSPGYS----PTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT 417
P PGY P P Y P P Y P P Y PQ Y P P P Y P
Sbjct: 174 PPQPGYPAQPYPQQPGYPPQQPGYPPQQPGYPPQQPGYPPQQPGYP------PQPGYPPQ 227
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGY 261
P Y P P Y P P Y P P Y P P + Y P GY P PGY
Sbjct: 228 QPGYPPQQPGYPPQQPGYPPQQPGYPPQQP--GYPAQQYPPQQGYPPQ-PGY 276
Score = 76.3 bits (186), Expect = 2e-12
Identities = 46/128 (35%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYS-------PTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP 429
+P PG P P+ P P Y P P Y PQ Y Y P PA P
Sbjct: 127 APVMPGQQPYFPNQPYQQQPMYPPQPGYPPQQP-YPPQQPGYPTQPGYPPQPG--YPAQP 183
Query: 428 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
Y P P Y P P Y P P Y P P Y P P Y P GY P PGY P
Sbjct: 184 Y-PQQPGYPPQQPGYPPQQPGYPPQQPGYPPQ-------QPGYPPQPGYPPQQPGYPPQQ 235
Query: 248 TGQYTPHE 225
G Y P +
Sbjct: 236 PG-YPPQQ 242
[241][TOP]
>UniRef100_UPI00015B4E97 PREDICTED: similar to conserved hypothetical protein n=1
Tax=Nasonia vitripennis RepID=UPI00015B4E97
Length = 1089
Score = 80.5 bits (197), Expect = 9e-14
Identities = 53/142 (37%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Frame = -3
Query: 584 PTSPGYSPTSP-SYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
P S P SP S P SP GP SP+ +P S P+ SP++ SP P P SP
Sbjct: 49 PASSASGPASPASGPPASPPSGPASPTSDPASPVSGPA---SPTSGPASP--PSGPASPT 103
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYS-PTLPGYSPSSTGQYTP 231
P SP+ P SP+ P+SPT P+SP S ASP P++ S P P +P+S + P
Sbjct: 104 SGPASPASGPASPTSGPASPTSGPASPASGPASPASGPASPASGPASPSSAPASPEEAYP 163
Query: 230 HEGDKKDKTGKKDASKDDKGNP 165
K ++D D G+P
Sbjct: 164 KSAGSSPKFQERD--YDIPGSP 183
Score = 76.3 bits (186), Expect = 2e-12
Identities = 48/107 (44%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYS-PTSP 411
SP S SPTS SP S PTS +P S SP+ P++ PASP S P SP
Sbjct: 66 SPPSGPASPTSDPASPVSGPASPTSGPASPPSGPASPT--SGPASPASGPASPTSGPASP 123
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD--YSPSAGYSP 276
P SP+ P SP+ P+SP P+SP S+ ASP+ Y SAG SP
Sbjct: 124 TSGPASPASGPASPASGPASPASGPASPSSAPASPEEAYPKSAGSSP 170
[242][TOP]
>UniRef100_Q9AXN1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Botryocladia
uvarioides RepID=Q9AXN1_9FLOR
Length = 1712
Score = 80.5 bits (197), Expect = 9e-14
Identities = 52/133 (39%), Positives = 70/133 (52%), Gaps = 16/133 (12%)
Frame = -3
Query: 572 GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP--YSPTSPN--- 408
G++P SP+Y TSP+ G +Y QS SP YSP++ +P SP S T P
Sbjct: 1570 GFAPASPAYKVTSPAPGGYGGAY--QSPARSPGAQYSPTSPAFTPTSPGYSSATGPGRPG 1627
Query: 407 ---YSPTSPSYSPTSP-------SYSPSSP-TYSPSSPYSSGASPDYSPSAGYSPTLPGY 261
YSPT PSY+ + +YSP SP TYSP+SP + SP + GYSP+ P Y
Sbjct: 1628 TGAYSPTGPSYNAAASPGYQSGINYSPGSPHTYSPNSPVFTPRSP---AAHGYSPSTPQY 1684
Query: 260 SPSSTGQYTPHEG 222
+P + Y + G
Sbjct: 1685 NPQGSNPYGQNAG 1697
Score = 80.5 bits (197), Expect = 9e-14
Identities = 49/118 (41%), Positives = 62/118 (52%), Gaps = 10/118 (8%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYS-------PTSPSYGPTSPSYN-PQSAKYSPSIAYSPSNARLSPA 435
YSPTSP ++PTSP YS P + +Y PT PSYN S Y I YSP +
Sbjct: 1603 YSPTSPAFTPTSPGYSSATGPGRPGTGAYSPTGPSYNAAASPGYQSGINYSPGSPH---- 1658
Query: 434 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP--SSPYSSGASPDYSPSAGYSPTLP 267
YSP SP ++P SP+ + YSPS+P Y+P S+PY A +A SP P
Sbjct: 1659 -TYSPNSPVFTPRSPA----AHGYSPSTPQYNPQGSNPYGQNAGSPAPGNANQSPASP 1711
Score = 79.0 bits (193), Expect = 3e-13
Identities = 46/114 (40%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNY 405
P SPG ++P SP+Y TSP+ Y SP+ SP + YSPTSP +
Sbjct: 1559 PQSPGSYNAGSGFAPASPAYKVTSPAPGGYGGAYQ-----SPAR---SPGAQYSPTSPAF 1610
Query: 404 SPTSPSYSPTSPSYSPSSPTYSPSSP-YSSGASPDYSPSAGYSPTLP-GYSPSS 249
+PTSP YS + P + YSP+ P Y++ ASP Y YSP P YSP+S
Sbjct: 1611 TPTSPGYSSATGPGRPGTGAYSPTGPSYNAAASPGYQSGINYSPGSPHTYSPNS 1664
Score = 70.9 bits (172), Expect = 7e-11
Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 27/144 (18%)
Frame = -3
Query: 587 SPTSPG-YSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNAR---LSPASPYSP 420
SP +PG + + +Y+P G P +P A SP ++ SP A SPA P SP
Sbjct: 1504 SPATPGNFGQNANAYTPLQSPRGDYMPPMSPGGAA-SPYVSASPGRASPYATSPAYPQSP 1562
Query: 419 TSPN----YSPTSPSYSPTSPS------------------YSPSSPTYSPSSP-YSSGAS 309
S N ++P SP+Y TSP+ YSP+SP ++P+SP YSS
Sbjct: 1563 GSYNAGSGFAPASPAYKVTSPAPGGYGGAYQSPARSPGAQYSPTSPAFTPTSPGYSSATG 1622
Query: 308 PDYSPSAGYSPTLPGYSPSSTGQY 237
P + YSPT P Y+ +++ Y
Sbjct: 1623 PGRPGTGAYSPTGPSYNAAASPGY 1646
Score = 64.7 bits (156), Expect = 5e-09
Identities = 51/142 (35%), Positives = 68/142 (47%), Gaps = 16/142 (11%)
Frame = -3
Query: 578 SPGYSPTSPSYSPTSP-SYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYS 402
SP S S SP +P ++G + +Y P SP Y P + ASPY SP +
Sbjct: 1493 SPSADEASFSPSPATPGNFGQNANAYTPLQ---SPRGDYMPPMSPGGAASPYVSASPGRA 1549
Query: 401 ---PTSPSYSPTSP-------SYSPSSPTYSPSSPYSSG-----ASPDYSPSAGYSPTLP 267
TSP+Y P SP ++P+SP Y +SP G SP SP A YSPT P
Sbjct: 1550 SPYATSPAY-PQSPGSYNAGSGFAPASPAYKVTSPAPGGYGGAYQSPARSPGAQYSPTSP 1608
Query: 266 GYSPSSTGQYTPHEGDKKDKTG 201
++P+S G Y+ G + TG
Sbjct: 1609 AFTPTSPG-YSSATGPGRPGTG 1629
[243][TOP]
>UniRef100_A2X9S8 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2X9S8_ORYSI
Length = 270
Score = 80.1 bits (196), Expect = 1e-13
Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 20/137 (14%)
Frame = -3
Query: 581 TSPGYSPTSPSY--SP---TSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPT 417
+SPGY+P+SP SP SP Y P++P S Y+PS +P A +P +PT
Sbjct: 50 SSPGYTPSSPMVMGSPRRAASPDYTPSTPPRRAASPDYTPSTPTTPRRAASPDYTPSTPT 109
Query: 416 ------SPNYSPTSPSYSPTSPSYSPSSPT---------YSPSSPYSSGASPDYSPSAGY 282
SP+Y+P++P SP Y+PS+PT Y+PS+P ASP+Y+PS
Sbjct: 110 PPRRAASPDYTPSTPPPRAASPDYTPSTPTPPRRAASPNYTPSTPQRHAASPNYTPS--- 166
Query: 281 SPTLPGYSPSSTGQYTP 231
+PT P + S YTP
Sbjct: 167 TPTPPRRAASL--DYTP 181
Score = 80.1 bits (196), Expect = 1e-13
Identities = 51/144 (35%), Positives = 73/144 (50%), Gaps = 32/144 (22%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPT---------SPSYGPTSPSYNPQSAK--YSPSI----AYSPS 456
Y+P++P SP Y+P+ SP Y P++P+ ++A Y+PS A SP
Sbjct: 73 YTPSTPPRRAASPDYTPSTPTTPRRAASPDYTPSTPTPPRRAASPDYTPSTPPPRAASPD 132
Query: 455 NARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPT---------YSPSSPYSSGASPD 303
+P P SPNY+P++P SP+Y+PS+PT Y+PS+P ASPD
Sbjct: 133 YTPSTPTPPRRAASPNYTPSTPQRHAASPNYTPSTPTPPRRAASLDYTPSTPPPRAASPD 192
Query: 302 YSP--------SAGYSPTLPGYSP 255
Y+P S YSP+ P SP
Sbjct: 193 YTPLSPPPRAASPEYSPSTPPPSP 216
Score = 72.4 bits (176), Expect = 3e-11
Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 15/126 (11%)
Frame = -3
Query: 578 SPGYSPTSPS--YSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSP----T 417
SP Y+P++P+ SP Y P++P S Y+PS P A +P +P
Sbjct: 100 SPDYTPSTPTPPRRAASPDYTPSTPPPRAASPDYTPSTPTPPRRAASPNYTPSTPQRHAA 159
Query: 416 SPNYSPTSPS---------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPG 264
SPNY+P++P+ Y+P++P +SP Y+P SP ASP+YSPS +P
Sbjct: 160 SPNYTPSTPTPPRRAASLDYTPSTPPPRAASPDYTPLSPPPRAASPEYSPSTPPPSPVPS 219
Query: 263 YSPSST 246
+ S T
Sbjct: 220 DAESGT 225
Score = 60.1 bits (144), Expect = 1e-07
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Frame = -3
Query: 578 SPGYSPT---------SPSYSPTSPSYGPTSPSYNPQS---AKYSPSIAYSPSNARLSPA 435
SP Y+P+ SP+Y+P++P SP+Y P + + + S+ Y+PS
Sbjct: 130 SPDYTPSTPTPPRRAASPNYTPSTPQRHAASPNYTPSTPTPPRRAASLDYTPS------T 183
Query: 434 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-SSPYSSGASP 306
P SP+Y+P SP SP YSPS+P SP S SG SP
Sbjct: 184 PPPRAASPDYTPLSPPPRAASPEYSPSTPPPSPVPSDAESGTSP 227
[244][TOP]
>UniRef100_Q1WKU0 Putative RNA polymerase II 215 kD subunit (Fragment) n=2
Tax=melanogaster subgroup RepID=Q1WKU0_DROYA
Length = 766
Score = 80.1 bits (196), Expect = 1e-13
Identities = 46/98 (46%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Frame = -3
Query: 587 SPTSPGYSPTSPS-YSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP 411
+P P +SP++ S S SPS+ P P +P S S S Y P++ +SP+ YSPTSP
Sbjct: 670 TPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMS-PYFPASPSVSPS--YSPTSP 726
Query: 410 NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 297
NY+ +SP + SP+YSPSSP YSP+SP + ASP Y+
Sbjct: 727 NYTASSPGGA--SPNYSPSSPNYSPTSPLYASASPRYA 762
Score = 79.3 bits (194), Expect = 2e-13
Identities = 42/87 (48%), Positives = 56/87 (64%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPN 408
S SP +SP P SP+SP GP+ Y P S SPS YSP++ + +SP SPN
Sbjct: 685 SGMSPSWSPAHPGSSPSSP--GPSMSPYFPASPSVSPS--YSPTSPNYTASSP-GGASPN 739
Query: 407 YSPTSPSYSPTSPSYSPSSPTYSPSSP 327
YSP+SP+YSPTSP Y+ +SP Y+ ++P
Sbjct: 740 YSPSSPNYSPTSPLYASASPRYASTTP 766
Score = 75.9 bits (185), Expect = 2e-12
Identities = 51/118 (43%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
Frame = -3
Query: 584 PTSPGYSPTSPSY-SPTS--PSYGPTSPSYNPQSAKYSPSIA--YSPSNARLSPASPYSP 420
P +P + +P Y SP + P PS++P +A + ++ +SP++ SP+SP
Sbjct: 647 PMTPWVNCNTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPS 706
Query: 419 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSS 249
SP Y P SPS SPSYSP+SP Y+ SSP GASP+YSPS+ YSPT P Y+ +S
Sbjct: 707 MSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYASAS 758
Score = 56.6 bits (135), Expect = 1e-06
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Frame = -3
Query: 560 TSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPS-Y 384
++PS +P P +P N + +Y +SP S +P P++SP++ S
Sbjct: 640 STPSMTP------PMTPWVNCNTPRY-----FSPPGH----VSAMTPGGPSFSPSAASDA 684
Query: 383 SPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPTLPGYSPSSTGQYTPH 228
S SPS+SP+ P SPSSP S ASP SPS YSPT P Y+ SS G +P+
Sbjct: 685 SGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPTSPNYTASSPGGASPN 739
[245][TOP]
>UniRef100_A8JUV4 CG34333 n=1 Tax=Drosophila melanogaster RepID=A8JUV4_DROME
Length = 578
Score = 80.1 bits (196), Expect = 1e-13
Identities = 64/156 (41%), Positives = 88/156 (56%), Gaps = 15/156 (9%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYN-PQSAKYSPSIAYSPSNARLSPASPYSP 420
+P +P YS P +PSYS P S SY P +PSY+ P + YS A PS + + +S +P
Sbjct: 337 APAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAA--PSYSAPASSSYSAP 394
Query: 419 TSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYSPSAGYS---PTLPG 264
+P+YS P +PSYS P S SYS P++P+YS P++P YS+ A+P YS A S P G
Sbjct: 395 AAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPASSG 454
Query: 263 YSPS---STGQYTPHEGDKKDKTGKKDASKDDKGNP 165
YS + S G P G KT ++ G+P
Sbjct: 455 YSAARAYSAGSAAPASGYSAPKTSSGYSAPASSGSP 490
Score = 79.7 bits (195), Expect = 2e-13
Identities = 60/131 (45%), Positives = 82/131 (62%), Gaps = 13/131 (9%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSY-GPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P +P YS P +PSYS P +PSY P S SY SA +PS + + + +PA+P YS
Sbjct: 107 APAAPSYSAPAAPSYSAPAAPSYSAPASSSY---SAPAAPSYSAPAAPSYSAPAAPSYSA 163
Query: 422 PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYSPSAGYS---PTLP 267
P S +YS P +PSYS P +PSYS P++P+YS P++P YS+ A+P YS A S P+ P
Sbjct: 164 PASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPSAP 223
Query: 266 GYSPSSTGQYT 234
YS T Y+
Sbjct: 224 SYSAQKTSSYS 234
Score = 79.7 bits (195), Expect = 2e-13
Identities = 61/138 (44%), Positives = 86/138 (62%), Gaps = 20/138 (14%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYN-PQSAKYS----PSIAYSPSNARLSPAS 432
+P S YS P +PSYS P +PSY P +PSY+ P S+ YS PS + + + +PA+
Sbjct: 131 APASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAA 190
Query: 431 P-YS-PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS--PSSPYSSGASPDY----SPSAG 285
P YS P +P+YS P +PSYS P +PSYS PS+P+YS +S YS+ A+P Y +P++
Sbjct: 191 PSYSAPAAPSYSAPAAPSYSAPAAPSYSAPSAPSYSAQKTSSYSAPAAPSYHAPAAPASS 250
Query: 284 YS-PTLPGYSPSSTGQYT 234
YS P P YS + Y+
Sbjct: 251 YSAPAGPSYSAPAAPSYS 268
Score = 79.0 bits (193), Expect = 3e-13
Identities = 61/137 (44%), Positives = 81/137 (59%), Gaps = 18/137 (13%)
Frame = -3
Query: 590 YSPTSP-GYS-PTSPSYSPTSPSY-GPTSPSYN-PQSAKYS----PSIAYSPSNARLSPA 435
YSP GYS P +P YSP +PSY P +PSY+ P + YS PS + + + +PA
Sbjct: 66 YSPAKDQGYSAPAAPVYSPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPA 125
Query: 434 SP-YS-PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS--PSSPYSSGASPDYSPSAGYS- 279
+P YS P S +YS P +PSYS P +PSYS P++P+YS SS YS+ A+P YS A S
Sbjct: 126 APSYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSY 185
Query: 278 --PTLPGYSPSSTGQYT 234
P P YS + Y+
Sbjct: 186 SAPAAPSYSAPAAPSYS 202
Score = 76.3 bits (186), Expect = 2e-12
Identities = 58/135 (42%), Positives = 82/135 (60%), Gaps = 21/135 (15%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P +P YS P +PSYS P S SY P +PSY SA +PS + + + +PA+P YS
Sbjct: 147 APAAPSYSAPAAPSYSAPASSSYSAPAAPSY---SAPAAPSYSAPAAPSYSAPAAPSYSA 203
Query: 422 PTSPNYS-PTSPSYS-PTSPSYS---------PSSPTY----SPSSPYSSGASPDYSPSA 288
P +P+YS P +PSYS P++PSYS P++P+Y +P+S YS+ A P YS A
Sbjct: 204 PAAPSYSAPAAPSYSAPSAPSYSAQKTSSYSAPAAPSYHAPAAPASSYSAPAGPSYSAPA 263
Query: 287 GYSPTLPGYS-PSST 246
S + P YS P+S+
Sbjct: 264 APSYSAPSYSAPASS 278
Score = 76.3 bits (186), Expect = 2e-12
Identities = 61/132 (46%), Positives = 80/132 (60%), Gaps = 14/132 (10%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYN-PQSAKYSPSIAYSPSNARLSPASP-YS 423
+P +P YS P + SYS P +PSY P +PSY+ P S+ YS A S S +PA+P YS
Sbjct: 321 APAAPTYSAPKAQSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYS----APAAPSYS 376
Query: 422 -PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS--PSSPYSSGASPDYSPSAGYS---PTL 270
P +P+YS P S SYS P +PSYS P++P+YS SS YS+ A+P YS A S P
Sbjct: 377 APAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAA 436
Query: 269 PGYSPSSTGQYT 234
P YS + Y+
Sbjct: 437 PSYSAPAAPSYS 448
Score = 74.3 bits (181), Expect = 7e-12
Identities = 58/129 (44%), Positives = 80/129 (62%), Gaps = 11/129 (8%)
Frame = -3
Query: 587 SPTSPGYSPT-SPSYS-PTSPSYG-PTSPSYN-PQSAKYSPSIAYSPSNARLSPASP-YS 423
+P +P YS + SPSYS P S SY P +P+Y+ P++ YS A S S +PA+P YS
Sbjct: 297 APAAPSYSSSASPSYSSPASSSYSAPAAPTYSAPKAQSYSAPAAPSYS----APAAPSYS 352
Query: 422 -PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS--PSSPYSSGASPDYSPSAGYSPTLPGY 261
P S +YS P +PSYS P +PSYS P++P+YS SS YS+ A+P YS +P P Y
Sbjct: 353 APASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYS-----APAAPSY 407
Query: 260 SPSSTGQYT 234
S ++ Y+
Sbjct: 408 SAPASSSYS 416
Score = 73.2 bits (178), Expect = 1e-11
Identities = 57/144 (39%), Positives = 83/144 (57%), Gaps = 26/144 (18%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSY-GPTSPSYN-PQSAKYS------------PSIAYSPS 456
+P +P YS P +PSYS P +PSY P +PSY+ P + YS PS + +
Sbjct: 171 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPSAPSYSAQKT 230
Query: 455 NARLSPASP--YSPTSP--NYS-PTSPSYS-PTSPSYSPSSPTYS-PSSPYSSGASPDYS 297
++ +PA+P ++P +P +YS P PSYS P +PSY S+P+YS P+S YS+ +P YS
Sbjct: 231 SSYSAPAAPSYHAPAAPASSYSAPAGPSYSAPAAPSY--SAPSYSAPASSYSALKAPSYS 288
Query: 296 PSAGYS---PTLPGYSPSSTGQYT 234
A S P P YS S++ Y+
Sbjct: 289 APAAPSYSAPAAPSYSSSASPSYS 312
Score = 72.4 bits (176), Expect = 3e-11
Identities = 57/158 (36%), Positives = 77/158 (48%), Gaps = 40/158 (25%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASPYS-P 420
+P +P YS P +PSYS P +PSY P++PSY+ Q + A +A +PAS YS P
Sbjct: 195 APAAPSYSAPAAPSYSAPAAPSYSAPSAPSYSAQKTSSYSAPAAPSYHAPAAPASSYSAP 254
Query: 419 TSPNYS-PTSPSYS---------------------PTSPSYS-PSSPTYSPS-------- 333
P+YS P +PSYS P +PSYS P++P+YS S
Sbjct: 255 AGPSYSAPAAPSYSAPSYSAPASSYSALKAPSYSAPAAPSYSAPAAPSYSSSASPSYSSP 314
Query: 332 --SPYSSGASPDYSPSAGYS---PTLPGYSPSSTGQYT 234
S YS+ A+P YS S P P YS + Y+
Sbjct: 315 ASSSYSAPAAPTYSAPKAQSYSAPAAPSYSAPAAPSYS 352
Score = 72.4 bits (176), Expect = 3e-11
Identities = 58/137 (42%), Positives = 77/137 (56%), Gaps = 19/137 (13%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSY---------GPTSPSYNPQSAKYSPSIAYSPSNARLSPA 435
+P +P YS +PSYS + SY P +PSY SA +PS + S S + SPA
Sbjct: 261 APAAPSYS--APSYSAPASSYSALKAPSYSAPAAPSY---SAPAAPSYSSSASPSYSSPA 315
Query: 434 -SPYS-PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS--PSSPYSSGASPDYSPSAGYS- 279
S YS P +P YS P + SYS P +PSYS P++P+YS SS YS+ A+P YS A S
Sbjct: 316 SSSYSAPAAPTYSAPKAQSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSY 375
Query: 278 --PTLPGYSPSSTGQYT 234
P P YS ++ Y+
Sbjct: 376 SAPAAPSYSAPASSSYS 392
Score = 70.5 bits (171), Expect = 1e-10
Identities = 54/126 (42%), Positives = 76/126 (60%), Gaps = 8/126 (6%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYS-PTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS-PT 417
+P S +P PSYS P +PSY ++PSY+ ++ YS A S S +PA+P YS P
Sbjct: 246 APASSYSAPAGPSYSAPAAPSY--SAPSYSAPASSYSALKAPSYS----APAAPSYSAPA 299
Query: 416 SPNYSPT-SPSY-SPTSPSYS-PSSPTYS--PSSPYSSGASPDYSPSAGYSPTLPGYSPS 252
+P+YS + SPSY SP S SYS P++PTYS + YS+ A+P YS +P P YS
Sbjct: 300 APSYSSSASPSYSSPASSSYSAPAAPTYSAPKAQSYSAPAAPSYS-----APAAPSYSAP 354
Query: 251 STGQYT 234
++ Y+
Sbjct: 355 ASSSYS 360
Score = 67.0 bits (162), Expect = 1e-09
Identities = 50/109 (45%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYN-PQSAKYSPSIAYSPSNARLSPASPYS- 423
+P +P YS P +PSYS P +PSY P +PSY+ P S+ YS + AYS +A +PAS YS
Sbjct: 417 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPASSGYSAARAYSAGSA--APASGYSA 474
Query: 422 -PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYS 279
TS YS + S SP + SYS + SS SSG S S S+GY+
Sbjct: 475 PKTSSGYSAPASSGSPAASSYSAPA-----SSTASSGYSAPASKSSGYA 518
Score = 65.1 bits (157), Expect = 4e-09
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 16/122 (13%)
Frame = -3
Query: 551 SYSPTSPS--YGPTSPSYNPQSAKYS----PSIAYSPSNARLSPASP-YS-PTSPNYS-P 399
SYSP P +P Y+P + YS PS + + + +PA+P YS P +P+YS P
Sbjct: 65 SYSPAKDQGYSAPAAPVYSPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAP 124
Query: 398 TSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYSPSAGYS---PTLPGYSPSSTGQ 240
+PSYS P S SYS P++P+YS P++P YS+ A+P YS A S P P YS +
Sbjct: 125 AAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPS 184
Query: 239 YT 234
Y+
Sbjct: 185 YS 186
Score = 62.8 bits (151), Expect = 2e-08
Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 11/95 (11%)
Frame = -3
Query: 485 YSPSIAYSPSNAR--LSPASP-YSPTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP 327
Y+ +YSP+ + +PA+P YSP +P+YS P +PSYS P +PSYS P++P+YS P++P
Sbjct: 60 YNSQSSYSPAKDQGYSAPAAPVYSPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAP 119
Query: 326 -YSSGASPDYSPSAGYS---PTLPGYSPSSTGQYT 234
YS+ A+P YS A S P P YS + Y+
Sbjct: 120 SYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYS 154
Score = 60.8 bits (146), Expect = 8e-08
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 7/91 (7%)
Frame = -3
Query: 485 YSPSIAYSPSNARLSPASPY---SPTSPNYSPTSPSYS-PTSPSYS-PSSPTYS-PSSP- 327
Y+P I Y+ S + SPA +P +P YSP +PSYS P +PSYS P++P+YS P++P
Sbjct: 54 YAPPIVYN-SQSSYSPAKDQGYSAPAAPVYSPAAPSYSAPAAPSYSAPAAPSYSAPAAPS 112
Query: 326 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYT 234
YS+ A+P YS +P P YS ++ Y+
Sbjct: 113 YSAPAAPSYS-----APAAPSYSAPASSSYS 138
[246][TOP]
>UniRef100_B4R3H4 GD16605 n=1 Tax=Drosophila simulans RepID=B4R3H4_DROSI
Length = 538
Score = 79.7 bits (195), Expect = 2e-13
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 15/133 (11%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSY-GPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P +P YS P +PSYS P +PSY P +PSY SA +PS + + + +PA+P YS
Sbjct: 115 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSY---SAPAAPSYSAPAAQSYSAPAAPSYSA 171
Query: 422 PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS--PSSPYSSGASPDY----SPSAGYS-PT 273
P +P+YS P +PSYS P +PSYS P++P+YS +S YS+ A+P Y +P++ YS P
Sbjct: 172 PAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAQKTSSYSAPAAPSYPAPAAPASSYSAPA 231
Query: 272 LPGYSPSSTGQYT 234
P YS + Y+
Sbjct: 232 GPSYSAPAAPSYS 244
Score = 79.7 bits (195), Expect = 2e-13
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 15/133 (11%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYGPT-SPSY-NPQSAKYS----PSIAYSPSNARLSPAS 432
+P +P YS P +PSYS P +PSY + SPSY +P S+ YS P+ + + + +PA+
Sbjct: 257 APKAPAYSAPAAPSYSAPAAPSYSSSASPSYSSPASSSYSAPAAPTYSAPKAQSYSAPAA 316
Query: 431 P-YS-PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS--PSSPYSSGASPDYSPSAGYSPT 273
P YS P +P+YS P +PSYS P +PSYS P++P+YS SS YS+ A+P YS +P
Sbjct: 317 PSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYS-----APA 371
Query: 272 LPGYSPSSTGQYT 234
P YS ++ Y+
Sbjct: 372 APSYSAPASSSYS 384
Score = 78.6 bits (192), Expect = 3e-13
Identities = 59/140 (42%), Positives = 81/140 (57%), Gaps = 21/140 (15%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYN-PQSAKYSPSIAYSPSNARLSPASP-YS 423
+P +P YS P +PSYS P +PSY P +PSY+ P + YS A S S +PA+P YS
Sbjct: 123 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAQSYSAPAAPSYS----APAAPSYS 178
Query: 422 -PTSPNYS-PTSPSYS-PTSPSYS---------PSSPTY----SPSSPYSSGASPDYSPS 291
P +P+YS P +PSYS P +PSYS P++P+Y +P+S YS+ A P YS
Sbjct: 179 APAAPSYSAPAAPSYSAPAAPSYSAQKTSSYSAPAAPSYPAPAAPASSYSAPAGPSYSAP 238
Query: 290 AGYSPTLPGYSPSSTGQYTP 231
A S + P YS ++ P
Sbjct: 239 AAPSYSAPSYSAPASSYSAP 258
Score = 78.2 bits (191), Expect = 5e-13
Identities = 62/145 (42%), Positives = 83/145 (57%), Gaps = 26/145 (17%)
Frame = -3
Query: 590 YSPTSP-GYS-PTSPSYSPTSPSY-GPTSPSYN-PQSAKYS----PSIAYSPSNARLSPA 435
YSP GYS P +P YSP +PSY P S SY+ P + YS PS + + + +PA
Sbjct: 66 YSPAKDQGYSAPAAPVYSPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPA 125
Query: 434 SP-YS-PTSPNYS-PTSPSYS-PTSPSYS---------PSSPTYS-PSSP-YSSGASPDY 300
+P YS P +P+YS P +PSYS P +PSYS P++P+YS P++P YS+ A+P Y
Sbjct: 126 APSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAQSYSAPAAPSYSAPAAPSYSAPAAPSY 185
Query: 299 SPSAGYS---PTLPGYSPSSTGQYT 234
S A S P P YS T Y+
Sbjct: 186 SAPAAPSYSAPAAPSYSAQKTSSYS 210
Score = 75.1 bits (183), Expect = 4e-12
Identities = 60/129 (46%), Positives = 80/129 (62%), Gaps = 14/129 (10%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
SP S YS P +P+YS P + SY P +PSY SA +PS + + + +PA+P YS
Sbjct: 289 SPASSSYSAPAAPTYSAPKAQSYSAPAAPSY---SAPAAPSYSAPAAPSYSAPAAPSYSA 345
Query: 422 PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS--PSSPYSSGASPDYSPSAGYS---PTLP 267
P +P+YS P S SYS P +PSYS P++P+YS SS YS+ A+P YS A S P P
Sbjct: 346 PAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPASQSYSAPAAP 405
Query: 266 GYS-PSSTG 243
YS P+S+G
Sbjct: 406 SYSAPASSG 414
Score = 74.7 bits (182), Expect = 5e-12
Identities = 61/133 (45%), Positives = 84/133 (63%), Gaps = 15/133 (11%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSY-GPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P +P YS P +PSYS P +PSY P +PSY SA +PS + S++ +PA+P YS
Sbjct: 313 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSY---SAPAAPSYSAPASSSYSAPAAPSYSA 369
Query: 422 PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYSP----SAGYSPTL 270
P +P+YS P S SYS P +PSYS P+S +YS P++P YS+ AS YS SAG +
Sbjct: 370 PAAPSYSAPASSSYSAPAAPSYSAPASQSYSAPAAPSYSAPASSGYSAARAYSAGSAAPA 429
Query: 269 PGYS-PSSTGQYT 234
GYS P ++ Y+
Sbjct: 430 SGYSAPKASSGYS 442
Score = 73.9 bits (180), Expect = 9e-12
Identities = 57/131 (43%), Positives = 81/131 (61%), Gaps = 16/131 (12%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYN-PQSAKYSPSIAYS------PSNARLSP 438
+P +P YS P +PSYS P +PSY P +PSY+ P S+ YS A S PS + +
Sbjct: 321 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAS 380
Query: 437 ASPYSPTSPNYS-PTSPSYS-PTSPSYS-PSSPTYSPSSPYSSGASPDYSPSAGYS--PT 273
+S +P +P+YS P S SYS P +PSYS P+S YS + YS+G++ +P++GYS
Sbjct: 381 SSYSAPAAPSYSAPASQSYSAPAAPSYSAPASSGYSAARAYSAGSA---APASGYSAPKA 437
Query: 272 LPGYS-PSSTG 243
GYS P+S+G
Sbjct: 438 SSGYSAPASSG 448
Score = 72.8 bits (177), Expect = 2e-11
Identities = 59/142 (41%), Positives = 81/142 (57%), Gaps = 24/142 (16%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYG-PTSPSYN-PQSAKYS----PSIAYSPSNARLSPA-SP 429
+P +P YS +PSYS + SY P +P+Y+ P + YS PS + S S + SPA S
Sbjct: 237 APAAPSYS--APSYSAPASSYSAPKAPAYSAPAAPSYSAPAAPSYSSSASPSYSSPASSS 294
Query: 428 YS-PTSPNYS---------PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYSPS 291
YS P +P YS P +PSYS P +PSYS P++P+YS P++P YS+ A+P YS
Sbjct: 295 YSAPAAPTYSAPKAQSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAP 354
Query: 290 AGYS---PTLPGYSPSSTGQYT 234
A S P P YS + Y+
Sbjct: 355 ASSSYSAPAAPSYSAPAAPSYS 376
Score = 72.4 bits (176), Expect = 3e-11
Identities = 55/144 (38%), Positives = 79/144 (54%), Gaps = 26/144 (18%)
Frame = -3
Query: 587 SPTSPGYS---------PTSPSYS-PTSPSY-GPTSPSYN-PQSAKYS----PSIAYSPS 456
+P +P YS P +PSYS P +PSY P +PSY+ P + YS PS + +
Sbjct: 147 APAAPSYSAPAAQSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAQKT 206
Query: 455 NARLSPA-----SPYSPTSPNYSPTSPSYS-PTSPSYSPSSPTYS-PSSPYSSGASPDYS 297
++ +PA +P +P S +P PSYS P +PSY S+P+YS P+S YS+ +P YS
Sbjct: 207 SSYSAPAAPSYPAPAAPASSYSAPAGPSYSAPAAPSY--SAPSYSAPASSYSAPKAPAYS 264
Query: 296 PSAGYS---PTLPGYSPSSTGQYT 234
A S P P YS S++ Y+
Sbjct: 265 APAAPSYSAPAAPSYSSSASPSYS 288
Score = 71.2 bits (173), Expect = 6e-11
Identities = 62/142 (43%), Positives = 76/142 (53%), Gaps = 24/142 (16%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS---------PTSPSY-GPTSP--SYN-PQSAKYSPSIAYSPSNA 450
+P +P YS P +PSYS P +PSY P +P SY+ P YS A S S
Sbjct: 187 APAAPSYSAPAAPSYSAQKTSSYSAPAAPSYPAPAAPASSYSAPAGPSYSAPAAPSYSAP 246
Query: 449 RLS-PASPYS-PTSPNYS-PTSPSYS-PTSPSYSPS-SPTYSP--SSPYSSGASPDYSPS 291
S PAS YS P +P YS P +PSYS P +PSYS S SP+YS SS YS+ A+P YS
Sbjct: 247 SYSAPASSYSAPKAPAYSAPAAPSYSAPAAPSYSSSASPSYSSPASSSYSAPAAPTYSAP 306
Query: 290 AGYS---PTLPGYSPSSTGQYT 234
S P P YS + Y+
Sbjct: 307 KAQSYSAPAAPSYSAPAAPSYS 328
Score = 67.0 bits (162), Expect = 1e-09
Identities = 53/131 (40%), Positives = 74/131 (56%), Gaps = 12/131 (9%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPS--YGPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
Y+P P + SYSP P +P Y+P + YS + S S +PA+P YS
Sbjct: 54 YAP--PVVYNSQSSYSPAKDQGYSAPAAPVYSPAAPSYSAPASSSYS----APAAPSYSA 107
Query: 422 PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYSPSAGYS---PTLP 267
P +P+YS P +PSYS P +PSYS P++P+YS P++P YS+ A+P YS A S P P
Sbjct: 108 PAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAQSYSAPAAP 167
Query: 266 GYSPSSTGQYT 234
YS + Y+
Sbjct: 168 SYSAPAAPSYS 178
Score = 58.5 bits (140), Expect = 4e-07
Identities = 53/144 (36%), Positives = 77/144 (53%), Gaps = 8/144 (5%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYN-PQSAKYSPSIAYSPSNARLSPASPYSP 420
+P +P YS P S SYS P +PSY P +PSY+ P S+ YS A PS + + S +P
Sbjct: 345 APAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPASSSYSAPAA--PSYSAPASQSYSAP 402
Query: 419 TSPNYS-PTSPSYSPTSPSYSPSSPTYSPSSPYSS-GASPDYS-PSAGYSPTLPGYS-PS 252
+P+YS P S YS + +YS S +P+S YS+ AS YS P++ SP YS P+
Sbjct: 403 AAPSYSAPASSGYS-AARAYSAGSA--APASGYSAPKASSGYSAPASSGSPAASSYSAPA 459
Query: 251 STGQYTPHEGDKKDKTGKKDASKD 180
S+ + + +G + D
Sbjct: 460 SSSASSGYSAPASKSSGYARSEMD 483
[247][TOP]
>UniRef100_Q7S3G4 Predicted protein n=1 Tax=Neurospora crassa RepID=Q7S3G4_NEUCR
Length = 532
Score = 79.7 bits (195), Expect = 2e-13
Identities = 59/145 (40%), Positives = 67/145 (46%), Gaps = 31/145 (21%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSY----------SPTSPSYGPTSP------------SYNPQSAK--Y 483
Y PTSPG P SP+Y SP S GPTSP Y+PQS
Sbjct: 90 YYPTSPGPGPQSPAYLPRSSEWVSTSPPSSILGPTSPPPVLRSPACAYTPYSPQSVSRGT 149
Query: 482 SPSIAYSPSNARLSPASPYSPTSP--NYSPTSP-SYSPTSPSYSPSSPTYSPSSP--YSS 318
SP+ Y S + P+ PY P SP + TSP Y PTSP P +P Y+PSSP S
Sbjct: 150 SPTYYYPTSPGPVPPSPPYIPRSPVWAFRDTSPDEYHPTSPGPGPQTPAYTPSSPQWVSG 209
Query: 317 GASPD--YSPSAGYSPTLPGYSPSS 249
G SP Y S G P P Y P S
Sbjct: 210 GMSPTNYYPTSPGPVPPSPPYIPRS 234
Score = 75.9 bits (185), Expect = 2e-12
Identities = 60/171 (35%), Positives = 73/171 (42%), Gaps = 51/171 (29%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSP-----------SYGPTSPSYNPQSAKYSPS----IAYSPS 456
Y PTSPG P SP Y P SP +Y PTSP PQS Y P ++ SP
Sbjct: 58 YYPTSPGPVPPSPPYIPQSPESVPGSVSPEGNYYPTSPGPGPQSPAYLPRSSEWVSTSPP 117
Query: 455 NARLSPASP---------------------------YSPTSPNYSPTSPSYSPTSP--SY 363
++ L P SP Y PTSP P SP Y P SP ++
Sbjct: 118 SSILGPTSPPPVLRSPACAYTPYSPQSVSRGTSPTYYYPTSPGPVPPSPPYIPRSPVWAF 177
Query: 362 SPSSP-TYSPSSPYSSGASPDYSPSA------GYSPTLPGYSPSSTGQYTP 231
+SP Y P+SP +P Y+PS+ G SPT Y P+S G P
Sbjct: 178 RDTSPDEYHPTSPGPGPQTPAYTPSSPQWVSGGMSPT--NYYPTSPGPVPP 226
Score = 72.0 bits (175), Expect = 3e-11
Identities = 51/151 (33%), Positives = 62/151 (41%), Gaps = 46/151 (30%)
Frame = -3
Query: 590 YSPTSPGYSPTSP-----------------SYSPTSPSYGPTSPSYNPQSAKY-----SP 477
Y PTSPG P SP Y PTSP GP +P+Y P S ++ SP
Sbjct: 154 YYPTSPGPVPPSPPYIPRSPVWAFRDTSPDEYHPTSPGPGPQTPAYTPSSPQWVSGGMSP 213
Query: 476 SIAYSPSNARLSPASPYSPTSPNY--------------SPTSPS----------YSPTSP 369
+ Y S + P+ PY P SP + PTSP Y PTSP
Sbjct: 214 TNYYPTSPGPVPPSPPYIPRSPEWWSTSSTPVPQSPADIPTSPQSGYRGTSSEKYYPTSP 273
Query: 368 SYSPSSPTYSPSSPYSSGASPDYSPSAGYSP 276
P SP Y P SP+ + SP P + SP
Sbjct: 274 GPVPPSPPYVPQSPHWASTSPTPVPLSPLSP 304
Score = 72.0 bits (175), Expect = 3e-11
Identities = 46/127 (36%), Positives = 60/127 (47%), Gaps = 29/127 (22%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSP----------SYGPTSPSYNPQSAKYSPS----------- 474
Y PTSPG P +P+Y+P+SP +Y PTSP P S Y P
Sbjct: 185 YHPTSPGPGPQTPAYTPSSPQWVSGGMSPTNYYPTSPGPVPPSPPYIPRSPEWWSTSSTP 244
Query: 473 IAYSPSNARLSPASPYS--------PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSS 318
+ SP++ SP S Y PTSP P SP Y P SP ++ +SPT P SP S
Sbjct: 245 VPQSPADIPTSPQSGYRGTSSEKYYPTSPGPVPPSPPYVPQSPHWASTSPTPVPLSPLSP 304
Query: 317 GASPDYS 297
A+ ++
Sbjct: 305 AATDPFN 311
Score = 65.5 bits (158), Expect = 3e-09
Identities = 57/143 (39%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSP---------TSPS---YGPTSPSYNPQSAKYSPSIAYSPSNAR 447
+ PTS G P SP Y P TSP+ Y PTSP P S Y P S +
Sbjct: 25 WGPTSLGPVPFSPPYIPRSLESTPGSTSPADYLYYPTSPGPVPPSPPYIPQSPESVPGS- 83
Query: 446 LSPASPYSPTSPNYSPTSPSYSPTSP---SYSPSSPTYSPSSPYSSGASP-----DYSP- 294
+SP Y PTSP P SP+Y P S S SP S P+SP SP YSP
Sbjct: 84 VSPEGNYYPTSPGPGPQSPAYLPRSSEWVSTSPPSSILGPTSPPPVLRSPACAYTPYSPQ 143
Query: 293 --SAGYSPTLPGYSPSSTGQYTP 231
S G SPT Y P+S G P
Sbjct: 144 SVSRGTSPTY--YYPTSPGPVPP 164
Score = 63.9 bits (154), Expect = 9e-09
Identities = 46/135 (34%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSP- 411
S + + PTS P SP Y P S P S + + Y S + P+ PY P SP
Sbjct: 19 SRSPENWGPTSLGPVPFSPPYIPRSLESTPGSTSPADYLYYPTSPGPVPPSPPYIPQSPE 78
Query: 410 ----------NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD------YSPSAGYS 279
NY PTSP P SP+Y P S + +SP SS P SP+ Y+
Sbjct: 79 SVPGSVSPEGNYYPTSPGPGPQSPAYLPRSSEWVSTSPPSSILGPTSPPPVLRSPACAYT 138
Query: 278 PTLPGYSPSSTGQYT 234
P YSP S + T
Sbjct: 139 P----YSPQSVSRGT 149
[248][TOP]
>UniRef100_UPI00006A1050 UPI00006A1050 related cluster n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A1050
Length = 273
Score = 79.3 bits (194), Expect = 2e-13
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPA-SPYSPT 417
Y PT Y PT +Y PT +Y PT + P + Y P+ + Y P+ + P S Y PT
Sbjct: 11 YCPTESNYCPTESNYCPTESNYCPTESNSCPTESNYCPTESNYCPTESNYCPTESNYCPT 70
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPS 252
NY PT + PT +Y P+SPT P SP + SP P SPT+ SP+
Sbjct: 71 ESNYCPTESNSCPTESNYCPTSPTIVPHSPTTVPLSPTIVPQ---SPTIVPQSPT 122
Score = 76.6 bits (187), Expect = 1e-12
Identities = 45/115 (39%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Frame = -3
Query: 590 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPA-SPYSPT 417
Y PT PT +Y PT +Y PT +Y P + Y P+ + Y P+ + P S Y PT
Sbjct: 32 YCPTESNSCPTESNYCPTESNYCPTESNYCPTESNYCPTESNYCPTESNSCPTESNYCPT 91
Query: 416 SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPS 252
SP P SP+ P SP+ P SPT P SP SP P SPT+ SP+
Sbjct: 92 SPTIVPHSPTTVPLSPTIVPQSPTIVPQSPTLVPLSPTIVP---LSPTIVPLSPT 143
Score = 70.9 bits (172), Expect = 7e-11
Identities = 49/135 (36%), Positives = 60/135 (44%), Gaps = 13/135 (9%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNY 405
PT Y PTSP+ P SP+ P SP+ PQS P SP+ LSP P SP
Sbjct: 83 PTESNYCPTSPTIVPHSPTTVPLSPTIVPQSPTIVPQ---SPTLVPLSPT--IVPLSPTI 137
Query: 404 SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-------------SAGYSPTLPG 264
P SP+ P SP+ P SPT +P SP SP P + Y PT
Sbjct: 138 VPLSPTIVPLSPTIVPLSPTIAPQSPTLVPLSPTIVPLSLSIVPQSPTLTESNYCPTESN 197
Query: 263 YSPSSTGQYTPHEGD 219
Y P+ + Y P E +
Sbjct: 198 YCPTES-NYCPIESN 211
Score = 69.3 bits (168), Expect = 2e-10
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = -3
Query: 551 SYSPTSPSYGPTSPSYNPQSAKYSPSIA-YSPSNARLSPA-SPYSPTSPNYSPTSPSYSP 378
+Y PT +Y PT +Y P + Y P+ + Y P+ + P S Y PT NY PT +Y P
Sbjct: 3 NYCPTGSNYCPTESNYCPTESNYCPTESNYCPTESNSCPTESNYCPTESNYCPTESNYCP 62
Query: 377 TSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 249
T +Y P+ Y P+ S +Y P+ SPT+ +SP++
Sbjct: 63 TESNYCPTESNYCPTESNSCPTESNYCPT---SPTIVPHSPTT 102
Score = 64.3 bits (155), Expect = 7e-09
Identities = 37/111 (33%), Positives = 49/111 (44%)
Frame = -3
Query: 584 PTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTSPNY 405
P SP P SP+ +P SP+ P SP+ P S P SP+ S Y PT NY
Sbjct: 146 PLSPTIVPLSPTIAPQSPTLVPLSPTIVPLSLSIVPQ---SPTLTE----SNYCPTESNY 198
Query: 404 SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPS 252
PT +Y P +Y P+ Y P+ S +Y P+ T P P+
Sbjct: 199 CPTESNYCPIESNYYPTESNYCPTESNSCPTESNYCPTESKPATYPATDPT 249
Score = 57.4 bits (137), Expect = 8e-07
Identities = 40/116 (34%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYSPTSPSYGPTSP-----SYNPQSAKYSPSIA-YSPSNARLSPA-SP 429
+P SP P SP+ P S S P SP +Y P + Y P+ + Y P + P S
Sbjct: 159 APQSPTLVPLSPTIVPLSLSIVPQSPTLTESNYCPTESNYCPTESNYCPIESNYYPTESN 218
Query: 428 YSPTSPNYSPTSPSYSPTS---PSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTL 270
Y PT N PT +Y PT +Y + PTY + P P Y P+ PTL
Sbjct: 219 YCPTESNSCPTESNYCPTESKPATYPATDPTYPATDPTYPAKDPTY-PATDLPPTL 273
[249][TOP]
>UniRef100_C6F091 RNA polymerase II (Fragment) n=1 Tax=Plasmodium berghei
RepID=C6F091_PLABE
Length = 161
Score = 79.3 bits (194), Expect = 2e-13
Identities = 50/115 (43%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Frame = -3
Query: 527 YGPTSPSYNPQS-AKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSS 351
Y PTSP+YN + A YSP+ + ++ + Y+ SP YS TSP YSPTSP YSPSS
Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60
Query: 350 PTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDAS 186
P P++P S SP S +SPT P YS SS P ++ TGK S
Sbjct: 61 PV--PNNPSSPQYSPYSITSPKFSPTSPAYSISS-----PVYDKNENMTGKNPLS 108
Score = 75.9 bits (185), Expect = 2e-12
Identities = 60/170 (35%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Frame = -3
Query: 590 YSPTSPG--------YSPTSP------------SYSPTSPSYGPTSPSYNPQSAKYSPSI 471
YSPTSP YSPTSP Y+ SP Y TSP Y+P S +YSPS
Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPS- 59
Query: 470 AYSPSNARLSPASPYSPTSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 300
SP P +P+SP YSP TSP +SPTSP+YS SSP Y + +
Sbjct: 60 ---------SPV-PNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKNENMT------- 102
Query: 299 SPSAGYSPTLPGYSPSSTGQYTPHEGDKK-----DKTGKKDASKDDKGNP 165
G +P P Y S Q + + + G D DD +P
Sbjct: 103 ----GKNPLSPAYMLQSRVQIRQNAQGTQVFSPIQQGGAHDVQNDDPFSP 148
[250][TOP]
>UniRef100_B4L5V4 GI21801 n=1 Tax=Drosophila mojavensis RepID=B4L5V4_DROMO
Length = 738
Score = 79.3 bits (194), Expect = 2e-13
Identities = 56/128 (43%), Positives = 78/128 (60%), Gaps = 10/128 (7%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSY-GPTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P +P YS P +PSYS P +PSY P +PSY SA +PS + + +PA+P YS
Sbjct: 274 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSY---SAPAAPSYSAPAAAGNSAPAAPSYSA 330
Query: 422 PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS--PSSPYSSGASPDYSPSAGYSPTLPGYS 258
P +P+YS P +PSYS P +PSYS P++P+YS +S YS+ A+P YS +P P Y+
Sbjct: 331 PAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPKASSYSAPAAPSYS-----APKAPSYA 385
Query: 257 PSSTGQYT 234
YT
Sbjct: 386 AQGVSSYT 393
Score = 78.2 bits (191), Expect = 5e-13
Identities = 59/144 (40%), Positives = 83/144 (57%), Gaps = 26/144 (18%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYN-PQSAKYSPSIAYS------PSNARLSP 438
+P +P YS P +PSYS P +PSY P +PSY+ P+++ YS A S PS A
Sbjct: 330 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPKASSYSAPAAPSYSAPKAPSYAAQGV 389
Query: 437 ASPYSPTSPNYS---------PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYS 297
+S +P +P+YS P +PSYS P +PSYS P++P+YS P++P YS+ A+P YS
Sbjct: 390 SSYTAPAAPSYSSAKAPSYSAPATPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYS 449
Query: 296 PSAGYS---PTLPGYSPSSTGQYT 234
A S P P YS + Y+
Sbjct: 450 APAAPSYSAPAAPSYSAPAAPSYS 473
Score = 77.8 bits (190), Expect = 6e-13
Identities = 57/128 (44%), Positives = 82/128 (64%), Gaps = 10/128 (7%)
Frame = -3
Query: 587 SPTSPGYSPT-SPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P +P YS +PSYS P +PSY P +PSY SA +PS + + + +PA+P YS
Sbjct: 394 APAAPSYSSAKAPSYSAPATPSYSAPAAPSY---SAPAAPSYSAPAAPSYSAPAAPSYSA 450
Query: 422 PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYSPSAGYSPTLPGYS 258
P +P+YS P +PSYS P +PSYS P++P+YS P++P YS+ A+P YS +P P YS
Sbjct: 451 PAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYS-----APAAPSYS 505
Query: 257 PSSTGQYT 234
+T Y+
Sbjct: 506 APATQSYS 513
Score = 75.9 bits (185), Expect = 2e-12
Identities = 59/126 (46%), Positives = 80/126 (63%), Gaps = 13/126 (10%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
S +P YS P +PSYS P +PSY P +PSY SA +PS + + + +PA+P YS
Sbjct: 402 SAKAPSYSAPATPSYSAPAAPSYSAPAAPSY---SAPAAPSYSAPAAPSYSAPAAPSYSA 458
Query: 422 PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYSPSAGYS---PTLP 267
P +P+YS P +PSYS P +PSYS P++P+YS P++P YS+ A+P YS A S P P
Sbjct: 459 PAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPATQSYSAPKPP 518
Query: 266 GYSPSS 249
YS S
Sbjct: 519 SYSAPS 524
Score = 73.9 bits (180), Expect = 9e-12
Identities = 57/139 (41%), Positives = 83/139 (59%), Gaps = 21/139 (15%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P +P YS P +PSYS P +PSY P +PSY SA +PS + +++ +PA+P YS
Sbjct: 322 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSY---SAPAAPSYSAPKASSYSAPAAPSYSA 378
Query: 422 PTSPNYS---------PTSPSYSPT-SPSYS-PSSPTYS-PSSP-YSSGASPDYSPSAGY 282
P +P+Y+ P +PSYS +PSYS P++P+YS P++P YS+ A+P YS A
Sbjct: 379 PKAPSYAAQGVSSYTAPAAPSYSSAKAPSYSAPATPSYSAPAAPSYSAPAAPSYSAPAAP 438
Query: 281 S---PTLPGYSPSSTGQYT 234
S P P YS + Y+
Sbjct: 439 SYSAPAAPSYSAPAAPSYS 457
Score = 73.6 bits (179), Expect = 1e-11
Identities = 59/152 (38%), Positives = 85/152 (55%), Gaps = 34/152 (22%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS---------PTSPSYG-PTSPSYNPQ-----SAKYSPSIAYSPS 456
+P +P YS P +PSYS P +PSY P +PSY Q +A +PS + + +
Sbjct: 346 APAAPSYSAPAAPSYSAPKASSYSAPAAPSYSAPKAPSYAAQGVSSYTAPAAPSYSSAKA 405
Query: 455 NARLSPASP---------YS-PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YS 321
+ +PA+P YS P +P+YS P +PSYS P +PSYS P++P+YS P++P YS
Sbjct: 406 PSYSAPATPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYS 465
Query: 320 SGASPDYSPSAGYS---PTLPGYSPSSTGQYT 234
+ A+P YS A S P P YS + Y+
Sbjct: 466 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSYS 497
Score = 72.8 bits (177), Expect = 2e-11
Identities = 54/126 (42%), Positives = 76/126 (60%), Gaps = 8/126 (6%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P +P YS P +PSYS P +PSY P +PSY SA +PS + + + +PA+P YS
Sbjct: 434 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSY---SAPAAPSYSAPAAPSYSAPAAPSYSA 490
Query: 422 PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPS 252
P +P+YS P +PSYS P + SYS P P+YS S YS+ +P YS + +P YS S
Sbjct: 491 PAAPSYSAPAAPSYSAPATQSYSAPKPPSYSAPS-YSAPKAPVYSAPSYSAPAAQRYSAS 549
Query: 251 STGQYT 234
+ Y+
Sbjct: 550 KSPSYS 555
Score = 72.0 bits (175), Expect = 3e-11
Identities = 62/141 (43%), Positives = 83/141 (58%), Gaps = 26/141 (18%)
Frame = -3
Query: 578 SPGYS-PTSPSYS-PTSPSYG-PTSPSYN-PQSAKYSPSIAYS---PSNARLS-PASP-Y 426
+P YS P +PSYS P +PSY P +PSY+ P +A S A S PS + S PA+P Y
Sbjct: 221 APNYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAAGNSAPAAQSYSAPSASSYSAPAAPSY 280
Query: 425 S-PTSPNYS-PTSPSYS-PTSPSYS-PSSPTYS---------PSSP-YSSGASPDYSPSA 288
S P +P+YS P +PSYS P +PSYS P++P+YS P++P YS+ A+P YS A
Sbjct: 281 SAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAAGNSAPAAPSYSAPAAPSYSAPA 340
Query: 287 GYS---PTLPGYSPSSTGQYT 234
S P P YS + Y+
Sbjct: 341 APSYSAPAAPSYSAPAAPSYS 361
Score = 71.6 bits (174), Expect = 4e-11
Identities = 55/144 (38%), Positives = 80/144 (55%), Gaps = 26/144 (18%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNP-----QSAKYSPSIAYSPSNARLSPAS 432
+P +P YS P +PSYS P +PSY P +PSY+ SA +PS + + + +PA+
Sbjct: 282 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAAGNSAPAAPSYSAPAAPSYSAPAA 341
Query: 431 P-YS-PTSPNYS-PTSPSYS---------PTSPSYS-PSSPTYSPS--SPYSSGASPDYS 297
P YS P +P+YS P +PSYS P +PSYS P +P+Y+ S Y++ A+P YS
Sbjct: 342 PSYSAPAAPSYSAPAAPSYSAPKASSYSAPAAPSYSAPKAPSYAAQGVSSYTAPAAPSYS 401
Query: 296 PSAGYS---PTLPGYSPSSTGQYT 234
+ S P P YS + Y+
Sbjct: 402 SAKAPSYSAPATPSYSAPAAPSYS 425
Score = 70.1 bits (170), Expect = 1e-10
Identities = 52/130 (40%), Positives = 78/130 (60%), Gaps = 12/130 (9%)
Frame = -3
Query: 587 SPTSPGYSPT-SPSYS-PTSPSYG-PTSPSYN-PQSAKYSPSIAYSPSNARLSPASPYSP 420
+P +P YS +P+YS P +PSY P +PSY+ P + YS A N+ + S +P
Sbjct: 210 APAAPSYSAAKAPNYSAPAAPSYSAPAAPSYSAPAAPSYSAPAA--AGNSAPAAQSYSAP 267
Query: 419 TSPNYS-PTSPSYS-PTSPSYS-PSSPTYS-PSSP-YSSGASPDYSPSA---GYSPTLPG 264
++ +YS P +PSYS P +PSYS P++P+YS P++P YS+ A+P YS A +P P
Sbjct: 268 SASSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAAGNSAPAAPS 327
Query: 263 YSPSSTGQYT 234
YS + Y+
Sbjct: 328 YSAPAAPSYS 337
Score = 68.6 bits (166), Expect = 4e-10
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 42/160 (26%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYN-PQSAKYSPSIAYS------PSNARLSP 438
+P++ YS P +PSYS P +PSY P +PSY+ P+++ YS A S PS A
Sbjct: 146 APSASSYSAPAAPSYSAPAAPSYSAPAAPSYSAPKASSYSAPAAPSYSAPKAPSYAAQGV 205
Query: 437 ASPYSPTSPNYS---------PTSPSYS-PTSPSYS-PSSPTYS---------------- 339
+S +P +P+YS P +PSYS P +PSYS P++P+YS
Sbjct: 206 SSYTAPAAPSYSAAKAPNYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAAGNSAPAAQSYS 265
Query: 338 --PSSPYSSGASPDYSPSAGYS---PTLPGYSPSSTGQYT 234
+S YS+ A+P YS A S P P YS + Y+
Sbjct: 266 APSASSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYS 305
Score = 67.8 bits (164), Expect = 6e-10
Identities = 56/152 (36%), Positives = 80/152 (52%), Gaps = 34/152 (22%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS---------PTSPSYG-PTSPSYN-PQSAKYSPSIAYS------ 462
+P +P YS P +PSYS P +PSY P +PSY+ P + YS A S
Sbjct: 298 APAAPSYSAPAAPSYSAPAAAGNSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAA 357
Query: 461 PSNARLSPASPYSPTSPNYS-PTSPSY---------SPTSPSYSPS-SPTYS-PSSP-YS 321
PS + +S +P +P+YS P +PSY +P +PSYS + +P+YS P++P YS
Sbjct: 358 PSYSAPKASSYSAPAAPSYSAPKAPSYAAQGVSSYTAPAAPSYSSAKAPSYSAPATPSYS 417
Query: 320 SGASPDYSPSAGYS---PTLPGYSPSSTGQYT 234
+ A+P YS A S P P YS + Y+
Sbjct: 418 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSYS 449
Score = 67.8 bits (164), Expect = 6e-10
Identities = 58/136 (42%), Positives = 74/136 (54%), Gaps = 23/136 (16%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P +P YS P +PSYS P +PSY P +PSY SA +PS + + + +PA+P YS
Sbjct: 442 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSY---SAPAAPSYSAPAAPSYSAPAAPSYSA 498
Query: 422 PTSPNYS-PTSPSYS-PTSPSYS------PSSPTYSPSS-------PYSSGASPDYSPSA 288
P +P+YS P + SYS P PSYS P +P YS S YS+ SP YS A
Sbjct: 499 PAAPSYSAPATQSYSAPKPPSYSAPSYSAPKAPVYSAPSYSAPAAQRYSASKSPSYSAPA 558
Query: 287 G--YS-PTLPGYSPSS 249
YS P P YS S
Sbjct: 559 APTYSAPKAPAYSAPS 574
Score = 64.7 bits (156), Expect = 5e-09
Identities = 54/136 (39%), Positives = 79/136 (58%), Gaps = 18/136 (13%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSP- 420
+P +P YS P +PSYS P +PSY P +PSY+ + + S S PS + S ++P +P
Sbjct: 474 APAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPATQ-SYSAPKPPSYSAPSYSAPKAPV 532
Query: 419 -TSPNYS-PTSPSYSPT-SPSYS-PSSPTYS-PSSP------YSSGASPDYS--PSAGYS 279
++P+YS P + YS + SPSYS P++PTYS P +P YS+ A+ YS ++ YS
Sbjct: 533 YSAPSYSAPAAQRYSASKSPSYSAPAAPTYSAPKAPAYSAPSYSAPATQTYSAPKASSYS 592
Query: 278 -PTLPGYSPSSTGQYT 234
P P YS Y+
Sbjct: 593 APAAPSYSAPKASVYS 608
Score = 62.8 bits (151), Expect = 2e-08
Identities = 51/130 (39%), Positives = 78/130 (60%), Gaps = 11/130 (8%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYS-PTSPSYG-PTSPSYNPQSAKYSPSIAYSPSNARLSPASP-YS- 423
+P + YS P++ SYS P +PSY P +PSY SA +PS + +++ +PA+P YS
Sbjct: 138 APAAQSYSAPSASSYSAPAAPSYSAPAAPSY---SAPAAPSYSAPKASSYSAPAAPSYSA 194
Query: 422 PTSPNYSPTSPSY--SPTSPSYSPS-SPTYS-PSSP-YSSGASPDYSPSAGYSPTLPGYS 258
P +P+Y+ S +P +PSYS + +P YS P++P YS+ A+P YS +P P YS
Sbjct: 195 PKAPSYAAQGVSSYTAPAAPSYSAAKAPNYSAPAAPSYSAPAAPSYS-----APAAPSYS 249
Query: 257 -PSSTGQYTP 231
P++ G P
Sbjct: 250 APAAAGNSAP 259
Score = 62.4 bits (150), Expect = 3e-08
Identities = 56/144 (38%), Positives = 78/144 (54%), Gaps = 26/144 (18%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYSPTSPS--YGPTSPSYN-PQSAKYSPSIAYS---PSNARLS-PAS 432
+P P YS P +P+YS +P P +PSY+ P +A S A S PS + S PA+
Sbjct: 98 APKGPVYSAPAAPNYSAPAPQGYSAPAAPSYSAPAAAGNSAPAAQSYSAPSASSYSAPAA 157
Query: 431 P-YS-PTSPNYS-PTSPSYS---------PTSPSYS-PSSPTYSPS--SPYSSGASPDYS 297
P YS P +P+YS P +PSYS P +PSYS P +P+Y+ S Y++ A+P YS
Sbjct: 158 PSYSAPAAPSYSAPAAPSYSAPKASSYSAPAAPSYSAPKAPSYAAQGVSSYTAPAAPSYS 217
Query: 296 --PSAGYS-PTLPGYSPSSTGQYT 234
+ YS P P YS + Y+
Sbjct: 218 AAKAPNYSAPAAPSYSAPAAPSYS 241
Score = 60.5 bits (145), Expect = 1e-07
Identities = 50/130 (38%), Positives = 75/130 (57%), Gaps = 12/130 (9%)
Frame = -3
Query: 587 SPTSPGYS-PTSPSYSPTSPSYG-PTSPSYN-PQSAKYSPSIAYSPSNARLSPASPYSPT 417
+P +P YS P +P+YS +PSY P + +Y+ P+++ YS A S S + S S +P
Sbjct: 556 APAAPTYSAPKAPAYS--APSYSAPATQTYSAPKASSYSAPAAPSYSAPKASVYS--APV 611
Query: 416 SP-NYSPTSPSYS-PTSPSYS-PSSPTYSPSSPYSSGASPDYSPSA--GY----SPTLPG 264
+P N +P +PSYS P + YS P +P+YS S +S ASP+YS A GY +P
Sbjct: 612 APSNSAPAAPSYSAPKATVYSAPGAPSYSGPSAHSRPASPNYSAPAAVGYVAPKAPPPAA 671
Query: 263 YSPSSTGQYT 234
Y+ S+ Y+
Sbjct: 672 YTASTASGYS 681
Score = 55.8 bits (133), Expect = 2e-06
Identities = 55/153 (35%), Positives = 72/153 (47%), Gaps = 34/153 (22%)
Frame = -3
Query: 587 SPTSPGYSPTSPSYS-PTSPSYGPTS---PSYNPQSAKYSPSIA------YSPSNARLSP 438
+P P YS +PSYS P +P Y S P+ SA SPS + YS A
Sbjct: 514 APKPPSYS--APSYSAPKAPVYSAPSYSAPAAQRYSASKSPSYSAPAAPTYSAPKAPAYS 571
Query: 437 ASPYS-PTSPNYS-PTSPSYS-PTSPSYS-----------------PSSPTYS--PSSPY 324
A YS P + YS P + SYS P +PSYS P++P+YS ++ Y
Sbjct: 572 APSYSAPATQTYSAPKASSYSAPAAPSYSAPKASVYSAPVAPSNSAPAAPSYSAPKATVY 631
Query: 323 SSGASPDYS-PSAGYSPTLPGYS-PSSTGQYTP 231
S+ +P YS PSA P P YS P++ G P
Sbjct: 632 SAPGAPSYSGPSAHSRPASPNYSAPAAVGYVAP 664