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[1][TOP] >UniRef100_Q9C6C2 RNA polymerase subunit; 10595-12672 n=1 Tax=Arabidopsis thaliana RepID=Q9C6C2_ARATH Length = 375 Score = 147 bits (372), Expect = 3e-34 Identities = 71/72 (98%), Positives = 71/72 (98%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK Sbjct: 304 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 363 Query: 135 ILEAKCEAIPDF 100 ILEAKCEAI DF Sbjct: 364 ILEAKCEAITDF 375 [2][TOP] >UniRef100_Q8LD68 RNA polymerase subunit n=1 Tax=Arabidopsis thaliana RepID=Q8LD68_ARATH Length = 375 Score = 147 bits (372), Expect = 3e-34 Identities = 71/72 (98%), Positives = 71/72 (98%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK Sbjct: 304 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 363 Query: 135 ILEAKCEAIPDF 100 ILEAKCEAI DF Sbjct: 364 ILEAKCEAITDF 375 [3][TOP] >UniRef100_Q39215 RNA polymerase subunit n=1 Tax=Arabidopsis thaliana RepID=Q39215_ARATH Length = 375 Score = 147 bits (372), Expect = 3e-34 Identities = 71/72 (98%), Positives = 71/72 (98%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK Sbjct: 304 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 363 Query: 135 ILEAKCEAIPDF 100 ILEAKCEAI DF Sbjct: 364 ILEAKCEAITDF 375 [4][TOP] >UniRef100_UPI00019857F6 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI00019857F6 Length = 372 Score = 107 bits (267), Expect = 4e-22 Identities = 49/69 (71%), Positives = 57/69 (82%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 KGKK+ATVA+PR CTLC+EC+R DD HV + VKNHFIF IESTG+LPPEVLF EAVK Sbjct: 299 KGKKKATVARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVK 358 Query: 135 ILEAKCEAI 109 +LE KCE + Sbjct: 359 VLEDKCERV 367 [5][TOP] >UniRef100_A7Q9B1 Chromosome chr19 scaffold_66, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7Q9B1_VITVI Length = 362 Score = 107 bits (267), Expect = 4e-22 Identities = 49/69 (71%), Positives = 57/69 (82%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 KGKK+ATVA+PR CTLC+EC+R DD HV + VKNHFIF IESTG+LPPEVLF EAVK Sbjct: 289 KGKKKATVARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVK 348 Query: 135 ILEAKCEAI 109 +LE KCE + Sbjct: 349 VLEDKCERV 357 [6][TOP] >UniRef100_Q39216 RNA polymerase subunit n=1 Tax=Arabidopsis thaliana RepID=Q39216_ARATH Length = 385 Score = 101 bits (251), Expect = 3e-20 Identities = 49/70 (70%), Positives = 57/70 (81%), Gaps = 1/70 (1%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDD-DLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAV 139 +G+KRATVA+PR C+LC+EC+RD + D VDL VKNHFIF IESTGS PPEVLF EAV Sbjct: 311 QGRKRATVARPRDCSLCRECIRDGVEWEDQVDLRRVKNHFIFTIESTGSQPPEVLFNEAV 370 Query: 138 KILEAKCEAI 109 KILE KCE + Sbjct: 371 KILEDKCERV 380 [7][TOP] >UniRef100_B9S9W7 DNA-directed RNA polymerase I/III subunits, putative n=1 Tax=Ricinus communis RepID=B9S9W7_RICCO Length = 374 Score = 100 bits (250), Expect = 4e-20 Identities = 47/68 (69%), Positives = 55/68 (80%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 GKKRATVA+PR CTLC+EC+R + V L VK+HFIF IESTG+LPPEVLFTEAVK+ Sbjct: 302 GKKRATVARPRACTLCRECIRGGEWDKRVSLRRVKDHFIFTIESTGALPPEVLFTEAVKV 361 Query: 132 LEAKCEAI 109 LE KCE + Sbjct: 362 LEDKCERV 369 [8][TOP] >UniRef100_C6TAS0 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6TAS0_SOYBN Length = 388 Score = 100 bits (248), Expect = 6e-20 Identities = 49/70 (70%), Positives = 56/70 (80%), Gaps = 1/70 (1%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDD-DLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAV 139 KGK+RA VA+PR CTLC+EC+R + D V L VKNHFIF IESTG+LPPEVLFTEAV Sbjct: 314 KGKRRAKVARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAV 373 Query: 138 KILEAKCEAI 109 KILE KCE + Sbjct: 374 KILEDKCERV 383 [9][TOP] >UniRef100_B9GFY9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GFY9_POPTR Length = 390 Score = 93.2 bits (230), Expect = 8e-18 Identities = 46/68 (67%), Positives = 54/68 (79%), Gaps = 1/68 (1%) Frame = -1 Query: 309 KKRATVAQPRKCTLCKECVR-DDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 KK+A VA R CTLC+EC+R D++ V L VK+HFIF IESTG+LPPEVLFTEAVKI Sbjct: 318 KKKAIVADSRACTLCRECIRGDEEWEKRVALHRVKDHFIFTIESTGALPPEVLFTEAVKI 377 Query: 132 LEAKCEAI 109 LEAKCE + Sbjct: 378 LEAKCERV 385 [10][TOP] >UniRef100_C5XXF5 Putative uncharacterized protein Sb04g006420 n=1 Tax=Sorghum bicolor RepID=C5XXF5_SORBI Length = 370 Score = 91.3 bits (225), Expect = 3e-17 Identities = 45/68 (66%), Positives = 54/68 (79%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G KRA VA+PR CTLC+ECV + + V+L V++HFIF IESTG+LPPEVLFTEAVKI Sbjct: 299 GGKRAVVAKPRACTLCRECVMGPN-GNQVELRRVRDHFIFTIESTGALPPEVLFTEAVKI 357 Query: 132 LEAKCEAI 109 LE KCE + Sbjct: 358 LEEKCERV 365 [11][TOP] >UniRef100_Q10MU2 Os03g0295400 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q10MU2_ORYSJ Length = 379 Score = 89.0 bits (219), Expect = 1e-16 Identities = 43/74 (58%), Positives = 55/74 (74%), Gaps = 6/74 (8%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDD------LVDHVDLGSVKNHFIFNIESTGSLPPEVLF 151 G+KRA VA+PR CTLC++CV V+ V+L V++HFIF IESTG+LPPE+LF Sbjct: 301 GEKRAVVARPRACTLCRQCVMGPTGEVMGPTVEQVELRRVRDHFIFTIESTGALPPEMLF 360 Query: 150 TEAVKILEAKCEAI 109 TEAV+ILE KCE + Sbjct: 361 TEAVRILEEKCERV 374 [12][TOP] >UniRef100_B4FAR4 Putative uncharacterized protein n=1 Tax=Zea mays RepID=B4FAR4_MAIZE Length = 372 Score = 89.0 bits (219), Expect = 1e-16 Identities = 44/68 (64%), Positives = 52/68 (76%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G KRA VA+PR CTLC+ECV + V+L V++HFIF IESTGS+PPEVLFTEAVKI Sbjct: 301 GGKRAVVARPRACTLCRECVMGPN-EKQVELRRVRDHFIFTIESTGSMPPEVLFTEAVKI 359 Query: 132 LEAKCEAI 109 LE KC + Sbjct: 360 LEEKCARV 367 [13][TOP] >UniRef100_A9T5P0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T5P0_PHYPA Length = 360 Score = 89.0 bits (219), Expect = 1e-16 Identities = 43/66 (65%), Positives = 49/66 (74%) Frame = -1 Query: 306 KRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILE 127 K+A VA+PR CTLC+ECVR D V L VK+HFIF IESTG+L PEVLFTEA+KIL Sbjct: 290 KKAIVARPRNCTLCRECVRGTDWDKRVQLTRVKDHFIFTIESTGALRPEVLFTEAIKILN 349 Query: 126 AKCEAI 109 KC I Sbjct: 350 EKCHRI 355 [14][TOP] >UniRef100_B6Q738 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6Q738_PENMQ Length = 373 Score = 75.5 bits (184), Expect = 2e-12 Identities = 33/65 (50%), Positives = 46/65 (70%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G+ +A V P K T+ +EC+R D+ D V LG V++HFIFN+ESTG P + LF E+VK+ Sbjct: 297 GEDKAVVVDPFKDTVSRECLRHDEFKDKVKLGRVRDHFIFNVESTGQFPSDTLFLESVKV 356 Query: 132 LEAKC 118 L+ KC Sbjct: 357 LKLKC 361 [15][TOP] >UniRef100_UPI0000F2C148 PREDICTED: similar to RNA polymerase I subunit hRPA39 n=1 Tax=Monodelphis domestica RepID=UPI0000F2C148 Length = 346 Score = 74.3 bits (181), Expect = 4e-12 Identities = 37/71 (52%), Positives = 48/71 (67%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 KGKK ATVA PR T +E R ++L V L V++H+IF++ESTG LPPEVL +EA+K Sbjct: 268 KGKKVATVANPRLDTFSREIFRHENLKKLVRLARVRDHYIFSVESTGVLPPEVLVSEAIK 327 Query: 135 ILEAKCEAIPD 103 +L KC D Sbjct: 328 VLMGKCRRFMD 338 [16][TOP] >UniRef100_O08521 Homologous to 40kD subunit of RNA-polymerase I and III (Fragment) n=1 Tax=Cricetulus griseus RepID=O08521_CRIGR Length = 347 Score = 73.9 bits (180), Expect = 5e-12 Identities = 31/68 (45%), Positives = 51/68 (75%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 GKK+A VA RK T+ +EC+R + D V LG V++H++F++ESTG + P+VLF +++ + Sbjct: 270 GKKQARVADVRKDTVSRECLRHPEFADKVQLGRVRDHYLFSVESTGIMKPDVLFIKSIAV 329 Query: 132 LEAKCEAI 109 L++KC A+ Sbjct: 330 LKSKCLAV 337 [17][TOP] >UniRef100_C0NBQ0 DNA-directed RNA polymerase I and III polypeptide n=1 Tax=Ajellomyces capsulatus G186AR RepID=C0NBQ0_AJECG Length = 380 Score = 73.9 bits (180), Expect = 5e-12 Identities = 32/69 (46%), Positives = 48/69 (69%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G+K+A V P K T+ +EC+R D+ V LG +++HFIFN+ESTG +VLF E+VK Sbjct: 298 EGEKKAVVVDPFKDTMSRECLRHDEFQGKVKLGRIRDHFIFNVESTGQFRSDVLFIESVK 357 Query: 135 ILEAKCEAI 109 +L+ KC + Sbjct: 358 VLKLKCRRL 366 [18][TOP] >UniRef100_A6R4R6 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1 Tax=Ajellomyces capsulatus NAm1 RepID=A6R4R6_AJECN Length = 380 Score = 73.9 bits (180), Expect = 5e-12 Identities = 32/69 (46%), Positives = 48/69 (69%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G+K+A V P K T+ +EC+R D+ V LG +++HFIFN+ESTG +VLF E+VK Sbjct: 298 EGEKKAVVVDPFKDTMSRECLRHDEFQGKVKLGRIRDHFIFNVESTGQFRSDVLFIESVK 357 Query: 135 ILEAKCEAI 109 +L+ KC + Sbjct: 358 VLKLKCRRL 366 [19][TOP] >UniRef100_O94616 DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Schizosaccharomyces pombe RepID=RPAC1_SCHPO Length = 348 Score = 73.9 bits (180), Expect = 5e-12 Identities = 31/68 (45%), Positives = 51/68 (75%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 GKK+A VA RK T+ +EC+R + D V LG V++H++F++ESTG + P+VLF +++ + Sbjct: 271 GKKQARVADVRKDTVSRECLRHPEFADKVQLGRVRDHYLFSVESTGIMKPDVLFIKSIAV 330 Query: 132 LEAKCEAI 109 L++KC A+ Sbjct: 331 LKSKCLAV 338 [20][TOP] >UniRef100_B8MRS0 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MRS0_TALSN Length = 373 Score = 73.6 bits (179), Expect = 7e-12 Identities = 33/65 (50%), Positives = 45/65 (69%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G+ +A V P K T+ +EC+R D+ D V LG V++HFIFNIESTG P + LF E+V + Sbjct: 297 GEDKAVVVDPFKDTVSRECLRHDEFKDKVKLGRVRDHFIFNIESTGQFPSDTLFLESVTV 356 Query: 132 LEAKC 118 L+ KC Sbjct: 357 LKLKC 361 [21][TOP] >UniRef100_UPI0000EDC949 PREDICTED: similar to RNA polymerase I subunit hRPA39 n=1 Tax=Ornithorhynchus anatinus RepID=UPI0000EDC949 Length = 346 Score = 72.8 bits (177), Expect = 1e-11 Identities = 37/71 (52%), Positives = 47/71 (66%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 KGKK A VA PR T +E R D+L V L V++H+IF++ESTG LPP+VL +EA+K Sbjct: 268 KGKKVAVVANPRLETFSREVFRHDELKKLVRLARVRDHYIFSVESTGVLPPDVLVSEAIK 327 Query: 135 ILEAKCEAIPD 103 IL KC D Sbjct: 328 ILMGKCRRFLD 338 [22][TOP] >UniRef100_C5FSZ3 DNA-directed RNA polymerase I and III subunit RPAC1 n=1 Tax=Microsporum canis CBS 113480 RepID=C5FSZ3_NANOT Length = 380 Score = 72.8 bits (177), Expect = 1e-11 Identities = 31/69 (44%), Positives = 49/69 (71%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G+K+A V P K T+ +EC+R D+ V LG V++HFIFNIESTG +++F E++K Sbjct: 297 EGEKKAVVVDPFKDTVSRECLRHDEFKGKVKLGRVRDHFIFNIESTGQFNSDLMFLESIK 356 Query: 135 ILEAKCEAI 109 +L+ KC+ + Sbjct: 357 VLKLKCQRL 365 [23][TOP] >UniRef100_C4JJM6 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1 Tax=Uncinocarpus reesii 1704 RepID=C4JJM6_UNCRE Length = 378 Score = 72.8 bits (177), Expect = 1e-11 Identities = 32/66 (48%), Positives = 46/66 (69%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 KG+K+A V P K T+ +EC+R ++ D V LG +++HFIFNIES G ++LF E+VK Sbjct: 294 KGEKKAVVVDPFKDTVSRECLRHEEFKDKVKLGRIRDHFIFNIESVGQFNSDLLFIESVK 353 Query: 135 ILEAKC 118 +L KC Sbjct: 354 VLRLKC 359 [24][TOP] >UniRef100_C6HA00 DNA-directed RNA polymerase I and III n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HA00_AJECH Length = 380 Score = 72.4 bits (176), Expect = 1e-11 Identities = 31/69 (44%), Positives = 47/69 (68%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G+K+ V P K T+ +EC+R D+ V LG +++HFIFN+ESTG +VLF E+VK Sbjct: 298 EGEKKVVVVDPFKDTMSRECLRHDEFQGKVKLGRIRDHFIFNVESTGQFRSDVLFIESVK 357 Query: 135 ILEAKCEAI 109 +L+ KC + Sbjct: 358 VLKLKCRRL 366 [25][TOP] >UniRef100_UPI0000E80092 PREDICTED: similar to RNA polymerase I subunit hRPA39 isoform 1 n=1 Tax=Gallus gallus RepID=UPI0000E80092 Length = 300 Score = 71.2 bits (173), Expect = 3e-11 Identities = 36/67 (53%), Positives = 46/67 (68%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 KGKK A VA R T +E R + L + V L V+NH+IF++ESTG LPP+VL TEA+K Sbjct: 222 KGKKVARVANARLDTFSREVFRHEGLKNLVRLARVRNHYIFSVESTGILPPDVLVTEAIK 281 Query: 135 ILEAKCE 115 IL KC+ Sbjct: 282 ILMGKCQ 288 [26][TOP] >UniRef100_UPI00016E11AB UPI00016E11AB related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E11AB Length = 347 Score = 71.2 bits (173), Expect = 3e-11 Identities = 35/66 (53%), Positives = 46/66 (69%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 GKK A VA R T +E +R DDL + V LG ++HFIF +E+TG LPP+VL TEA+K+ Sbjct: 272 GKKVAKVANSRLDTCSREVLRHDDLKNVVKLGRHRDHFIFTVETTGILPPDVLVTEAIKV 331 Query: 132 LEAKCE 115 L KC+ Sbjct: 332 LMTKCQ 337 [27][TOP] >UniRef100_UPI00016E11AA UPI00016E11AA related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E11AA Length = 351 Score = 71.2 bits (173), Expect = 3e-11 Identities = 35/66 (53%), Positives = 46/66 (69%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 GKK A VA R T +E +R DDL + V LG ++HFIF +E+TG LPP+VL TEA+K+ Sbjct: 274 GKKVAKVANSRLDTCSREVLRHDDLKNVVKLGRHRDHFIFTVETTGILPPDVLVTEAIKV 333 Query: 132 LEAKCE 115 L KC+ Sbjct: 334 LMTKCQ 339 [28][TOP] >UniRef100_UPI00003ACD10 PREDICTED: similar to RNA polymerase I subunit hRPA39 isoform 2 n=1 Tax=Gallus gallus RepID=UPI00003ACD10 Length = 346 Score = 71.2 bits (173), Expect = 3e-11 Identities = 36/67 (53%), Positives = 46/67 (68%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 KGKK A VA R T +E R + L + V L V+NH+IF++ESTG LPP+VL TEA+K Sbjct: 268 KGKKVARVANARLDTFSREVFRHEGLKNLVRLARVRNHYIFSVESTGILPPDVLVTEAIK 327 Query: 135 ILEAKCE 115 IL KC+ Sbjct: 328 ILMGKCQ 334 [29][TOP] >UniRef100_B7Q825 Transferase, putative n=1 Tax=Ixodes scapularis RepID=B7Q825_IXOSC Length = 344 Score = 71.2 bits (173), Expect = 3e-11 Identities = 35/67 (52%), Positives = 47/67 (70%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G K A VA R T + + DDL D V+L VK+HFIF++ESTG+ PP++L TEA+K+ Sbjct: 266 GHKVARVANARADTCSRNVFQYDDLKDAVELTRVKDHFIFSVESTGAYPPDLLVTEAIKV 325 Query: 132 LEAKCEA 112 L AKC+A Sbjct: 326 LMAKCQA 332 [30][TOP] >UniRef100_C5GBG6 DNA-directed RNA polymerase I and III polypeptide n=2 Tax=Ajellomyces dermatitidis RepID=C5GBG6_AJEDR Length = 380 Score = 71.2 bits (173), Expect = 3e-11 Identities = 31/69 (44%), Positives = 48/69 (69%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G+K+A V P K T+ +EC+R ++ V LG +++HFIFN+ESTG +VLF E+VK Sbjct: 298 EGEKKAVVLDPFKDTVSRECLRHEEFRGKVKLGRIRDHFIFNVESTGQFRSDVLFLESVK 357 Query: 135 ILEAKCEAI 109 +L+ KC + Sbjct: 358 VLKLKCRRL 366 [31][TOP] >UniRef100_Q6DRM8 RNA polymerase I 140 kDa subunit n=1 Tax=Danio rerio RepID=Q6DRM8_DANRE Length = 343 Score = 70.9 bits (172), Expect = 4e-11 Identities = 34/66 (51%), Positives = 46/66 (69%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G+K A V R T +E +R DDL V LG V++HFIF++ESTG LPP+VL TEA+ + Sbjct: 266 GRKVAKVVNSRLDTCSREVLRHDDLKSLVKLGRVRDHFIFSVESTGILPPDVLVTEAINV 325 Query: 132 LEAKCE 115 L +KC+ Sbjct: 326 LMSKCQ 331 [32][TOP] >UniRef100_Q4RCT8 Chromosome undetermined SCAF18092, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4RCT8_TETNG Length = 128 Score = 70.9 bits (172), Expect = 4e-11 Identities = 36/66 (54%), Positives = 45/66 (68%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G+K A VA R T +E +R DDL V LG ++HFIF +ESTG LPPEVL TEA+K+ Sbjct: 51 GRKVARVANSRLDTCSREVLRHDDLKKVVKLGRRRDHFIFTVESTGILPPEVLVTEAIKV 110 Query: 132 LEAKCE 115 L KC+ Sbjct: 111 LMNKCQ 116 [33][TOP] >UniRef100_A2ATX1 Polymerase (RNA) I polypeptide C n=2 Tax=Danio rerio RepID=A2ATX1_DANRE Length = 362 Score = 70.9 bits (172), Expect = 4e-11 Identities = 34/66 (51%), Positives = 46/66 (69%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G+K A V R T +E +R DDL V LG V++HFIF++ESTG LPP+VL TEA+ + Sbjct: 285 GRKVAKVVNSRLDTCSREVLRHDDLKSLVKLGRVRDHFIFSVESTGILPPDVLVTEAINV 344 Query: 132 LEAKCE 115 L +KC+ Sbjct: 345 LMSKCQ 350 [34][TOP] >UniRef100_C1H4P1 DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1H4P1_PARBA Length = 380 Score = 70.9 bits (172), Expect = 4e-11 Identities = 31/69 (44%), Positives = 47/69 (68%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G K+A V P K T+ +EC+R ++ V LG +++HFIFN+ESTG +VLF E+VK Sbjct: 298 EGAKKAVVLDPFKDTVSRECLRHEEFQGKVKLGRIRDHFIFNVESTGQFRSDVLFLESVK 357 Query: 135 ILEAKCEAI 109 +L+ KC + Sbjct: 358 VLKLKCRKL 366 [35][TOP] >UniRef100_C0SF50 DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SF50_PARBP Length = 345 Score = 70.9 bits (172), Expect = 4e-11 Identities = 31/69 (44%), Positives = 47/69 (68%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G K+A V P K T+ +EC+R ++ V LG +++HFIFN+ESTG +VLF E+VK Sbjct: 263 EGAKKAVVLDPFKDTVSRECLRHEEFQGKVKLGRIRDHFIFNVESTGQFRSDVLFLESVK 322 Query: 135 ILEAKCEAI 109 +L+ KC + Sbjct: 323 VLKLKCRKL 331 [36][TOP] >UniRef100_Q32L22 DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Bos taurus RepID=RPAC1_BOVIN Length = 346 Score = 70.9 bits (172), Expect = 4e-11 Identities = 35/71 (49%), Positives = 48/71 (67%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +GKK A VA PR T +E R++ L V L V++HFIF++ESTG LPP+VL +EA+K Sbjct: 268 QGKKVARVANPRLDTFSREVFRNEKLKKVVRLARVRDHFIFSVESTGVLPPDVLVSEAIK 327 Query: 135 ILEAKCEAIPD 103 +L KC+ D Sbjct: 328 VLMGKCQRFLD 338 [37][TOP] >UniRef100_C1GK69 DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Paracoccidioides brasiliensis Pb18 RepID=C1GK69_PARBD Length = 380 Score = 70.5 bits (171), Expect = 6e-11 Identities = 31/69 (44%), Positives = 47/69 (68%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G K+A V P K T+ +EC+R ++ V LG +++HFIFN+ESTG +VLF E+VK Sbjct: 298 EGAKKAVVLDPFKDTVSRECLRHEEFRGKVKLGRIRDHFIFNVESTGQFRSDVLFLESVK 357 Query: 135 ILEAKCEAI 109 +L+ KC + Sbjct: 358 VLKLKCRKL 366 [38][TOP] >UniRef100_UPI00017F0A34 PREDICTED: RNA polymerase I subunit hRPA39 n=1 Tax=Sus scrofa RepID=UPI00017F0A34 Length = 346 Score = 69.7 bits (169), Expect = 9e-11 Identities = 35/71 (49%), Positives = 47/71 (66%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +GKK A VA PR T +E R+D L V L V++H+IF++ESTG LPP+VL +EA+K Sbjct: 268 QGKKVARVANPRLDTFSREVFRNDMLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIK 327 Query: 135 ILEAKCEAIPD 103 +L KC D Sbjct: 328 VLMGKCRRFLD 338 [39][TOP] >UniRef100_UPI000175846B PREDICTED: similar to CG3756 CG3756-PA n=1 Tax=Tribolium castaneum RepID=UPI000175846B Length = 338 Score = 69.7 bits (169), Expect = 9e-11 Identities = 35/71 (49%), Positives = 48/71 (67%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 KG+K A VA R T + R +DL D V + +++HFIF +ES G+LPP+V+F EAVK Sbjct: 263 KGRKYAVVANARYDTGSRNVFRYEDLKDAVAMTKIQDHFIFTVESVGALPPDVIFMEAVK 322 Query: 135 ILEAKCEAIPD 103 IL+ KC A+ D Sbjct: 323 ILKDKCLALLD 333 [40][TOP] >UniRef100_B3S4F3 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S4F3_TRIAD Length = 349 Score = 69.7 bits (169), Expect = 9e-11 Identities = 33/66 (50%), Positives = 46/66 (69%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 KG K A + +PR T ++ +RD +L +HV L +++HFIF IESTGS+PP +F E+VK Sbjct: 268 KGIKTAYIDKPRLDTCSRQVLRDPELKEHVILNKIRDHFIFCIESTGSIPPADIFRESVK 327 Query: 135 ILEAKC 118 IL KC Sbjct: 328 ILRQKC 333 [41][TOP] >UniRef100_A9V9D0 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V9D0_MONBE Length = 363 Score = 69.7 bits (169), Expect = 9e-11 Identities = 32/72 (44%), Positives = 49/72 (68%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 KG+ A + PR T+ +E R DDL D V+L V++HFIF++ES G+L P+VL A++ Sbjct: 269 KGEDEAKIVNPRADTVSREVFRHDDLRDKVELNRVRDHFIFSVESVGALAPDVLVLMALQ 328 Query: 135 ILEAKCEAIPDF 100 L++KC+ + DF Sbjct: 329 ELKSKCQRVIDF 340 [42][TOP] >UniRef100_Q1DYH9 Putative uncharacterized protein n=1 Tax=Coccidioides immitis RepID=Q1DYH9_COCIM Length = 382 Score = 69.3 bits (168), Expect = 1e-10 Identities = 31/66 (46%), Positives = 46/66 (69%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G+K+A V P K T+ +EC+R ++ V LG V++HFIFNIES G ++LF E+VK Sbjct: 298 EGQKKAVVVDPFKDTVSRECLRHEEFKGKVKLGRVRDHFIFNIESVGQFNSDLLFLESVK 357 Query: 135 ILEAKC 118 +L+ KC Sbjct: 358 VLKLKC 363 [43][TOP] >UniRef100_C5P1D3 DNA-directed RNA polymerase, putative n=1 Tax=Coccidioides posadasii C735 delta SOWgp RepID=C5P1D3_COCP7 Length = 382 Score = 69.3 bits (168), Expect = 1e-10 Identities = 31/66 (46%), Positives = 46/66 (69%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G+K+A V P K T+ +EC+R ++ V LG V++HFIFNIES G ++LF E+VK Sbjct: 298 EGEKKAVVVDPFKDTVSRECLRHEEFKGKVKLGRVRDHFIFNIESVGQFNSDLLFLESVK 357 Query: 135 ILEAKC 118 +L+ KC Sbjct: 358 VLKLKC 363 [44][TOP] >UniRef100_B6JXY4 DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JXY4_SCHJY Length = 349 Score = 69.3 bits (168), Expect = 1e-10 Identities = 30/68 (44%), Positives = 49/68 (72%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 GK RA VA RK T+ +EC+R + D V LG V+++F+++IESTG + P+ LF +++ + Sbjct: 271 GKPRARVADVRKDTVSRECLRHPEFADKVQLGRVRDYFLYSIESTGIIKPDQLFLKSIAV 330 Query: 132 LEAKCEAI 109 L++KC A+ Sbjct: 331 LKSKCMAV 338 [45][TOP] >UniRef100_Q0UUA6 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UUA6_PHANO Length = 350 Score = 68.9 bits (167), Expect = 2e-10 Identities = 30/69 (43%), Positives = 47/69 (68%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G+ +A V P K T+ +EC+R + D V+LG +++HFIF +ESTG + LF E+VK Sbjct: 273 EGESKAVVDDPMKDTVSRECLRHPEFKDKVNLGRIRDHFIFRVESTGQWESDELFLESVK 332 Query: 135 ILEAKCEAI 109 +L+ KC+ I Sbjct: 333 LLKVKCQRI 341 [46][TOP] >UniRef100_O15160 DNA-directed RNA polymerases I and III subunit RPAC1 n=2 Tax=Homo sapiens RepID=RPAC1_HUMAN Length = 346 Score = 68.9 bits (167), Expect = 2e-10 Identities = 34/71 (47%), Positives = 47/71 (66%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +GKK A VA PR T +E R++ L V L V++H+IF++ESTG LPP+VL +EA+K Sbjct: 268 QGKKVARVANPRLDTFSREIFRNEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIK 327 Query: 135 ILEAKCEAIPD 103 +L KC D Sbjct: 328 VLMGKCRRFLD 338 [47][TOP] >UniRef100_UPI0000D6145A DNA-directed RNA polymerases I and III subunit RPAC1 (RNA polymerases I and III subunit AC1) (DNA-directed RNA polymerase I subunit C) (DNA- directed RNA polymerases I and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40) (AC40). n=1 Tax=Homo sapiens RepID=UPI0000D6145A Length = 210 Score = 68.6 bits (166), Expect = 2e-10 Identities = 34/70 (48%), Positives = 46/70 (65%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 GKK A VA PR T +E R++ L V L V++H+IF++ESTG LPP+VL +EA+K+ Sbjct: 133 GKKVARVANPRLDTFSREIFRNEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKV 192 Query: 132 LEAKCEAIPD 103 L KC D Sbjct: 193 LMGKCRRFLD 202 [48][TOP] >UniRef100_UPI000059D8D9 UPI000059D8D9 related cluster n=1 Tax=Homo sapiens RepID=UPI000059D8D9 Length = 169 Score = 68.6 bits (166), Expect = 2e-10 Identities = 34/70 (48%), Positives = 46/70 (65%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 GKK A VA PR T +E R++ L V L V++H+IF++ESTG LPP+VL +EA+K+ Sbjct: 92 GKKVARVANPRLDTFSREIFRNEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKV 151 Query: 132 LEAKCEAIPD 103 L KC D Sbjct: 152 LMGKCRRFLD 161 [49][TOP] >UniRef100_Q5JTD9 Polymerase (RNA) I polypeptide C, 30kDa (Fragment) n=1 Tax=Homo sapiens RepID=Q5JTD9_HUMAN Length = 168 Score = 68.6 bits (166), Expect = 2e-10 Identities = 34/70 (48%), Positives = 46/70 (65%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 GKK A VA PR T +E R++ L V L V++H+IF++ESTG LPP+VL +EA+K+ Sbjct: 91 GKKVARVANPRLDTFSREIFRNEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKV 150 Query: 132 LEAKCEAIPD 103 L KC D Sbjct: 151 LMGKCRRFLD 160 [50][TOP] >UniRef100_UPI000155FEE2 PREDICTED: similar to DNA-directed RNA polymerases I and III subunit RPAC1 (RNA polymerases I and III subunit AC1) (DNA-directed RNA polymerase I subunit C) (DNA-directed RNA polymerases I and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40) (AC40) n=1 Tax=Equus caballus RepID=UPI000155FEE2 Length = 346 Score = 68.2 bits (165), Expect = 3e-10 Identities = 34/71 (47%), Positives = 46/71 (64%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +GKK A VA PR T +E R + L V L V++H+IF++ESTG LPP+VL +EA+K Sbjct: 268 QGKKVARVANPRLDTFSREVFRHEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIK 327 Query: 135 ILEAKCEAIPD 103 +L KC D Sbjct: 328 VLMGKCRRFLD 338 [51][TOP] >UniRef100_UPI0000D9AD00 PREDICTED: RNA polymerase I subunit n=1 Tax=Macaca mulatta RepID=UPI0000D9AD00 Length = 291 Score = 68.2 bits (165), Expect = 3e-10 Identities = 34/71 (47%), Positives = 46/71 (64%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +GKK A VA PR T +E R + L V L V++H+IF++ESTG LPP+VL +EA+K Sbjct: 213 QGKKVARVANPRLDTFSREIFRHEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIK 272 Query: 135 ILEAKCEAIPD 103 +L KC D Sbjct: 273 VLMGKCRRFLD 283 [52][TOP] >UniRef100_UPI00004A557E PREDICTED: similar to DNA-directed RNA polymerase I 40 kDa polypeptide (RPA40) (RPA39) isoform 1 n=1 Tax=Canis lupus familiaris RepID=UPI00004A557E Length = 346 Score = 68.2 bits (165), Expect = 3e-10 Identities = 34/71 (47%), Positives = 46/71 (64%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +GKK A VA PR T +E R + L V L V++H+IF++ESTG LPP+VL +EA+K Sbjct: 268 QGKKVARVANPRLDTFSREVFRKEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIK 327 Query: 135 ILEAKCEAIPD 103 +L KC D Sbjct: 328 VLMGKCRRFLD 338 [53][TOP] >UniRef100_Q54SN4 DNA-directed RNA polymerases I and III subunit rpac1 n=1 Tax=Dictyostelium discoideum RepID=RPAC1_DICDI Length = 345 Score = 68.2 bits (165), Expect = 3e-10 Identities = 28/67 (41%), Positives = 44/67 (65%) Frame = -1 Query: 303 RATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEA 124 + A+P CT+C+EC+RD + +V + V++HFIF+IESTG+L +F EA+KI Sbjct: 272 QVVAARPLDCTMCRECIRDPEFEQNVKIERVRDHFIFSIESTGALKSREIFQEAIKIFIE 331 Query: 123 KCEAIPD 103 KC + + Sbjct: 332 KCNIVEE 338 [54][TOP] >UniRef100_UPI000194C203 PREDICTED: polymerase (RNA) I polypeptide C, 30kDa n=1 Tax=Taeniopygia guttata RepID=UPI000194C203 Length = 346 Score = 67.8 bits (164), Expect = 4e-10 Identities = 34/66 (51%), Positives = 45/66 (68%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 GKK A VA R T +E R + L + V L V+NH+IF++ESTG LPP+VL +EA+KI Sbjct: 269 GKKVARVANARLDTFSREVFRHEGLKNLVRLARVRNHYIFSVESTGILPPDVLVSEAIKI 328 Query: 132 LEAKCE 115 L KC+ Sbjct: 329 LMGKCQ 334 [55][TOP] >UniRef100_UPI00005A26F6 PREDICTED: similar to DNA-directed RNA polymerase I 40 kDa polypeptide (RPA40) (RPA39) isoform 4 n=1 Tax=Canis lupus familiaris RepID=UPI00005A26F6 Length = 296 Score = 67.8 bits (164), Expect = 4e-10 Identities = 34/70 (48%), Positives = 45/70 (64%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 GKK A VA PR T +E R + L V L V++H+IF++ESTG LPP+VL +EA+K+ Sbjct: 219 GKKVARVANPRLDTFSREVFRKEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKV 278 Query: 132 LEAKCEAIPD 103 L KC D Sbjct: 279 LMGKCRRFLD 288 [56][TOP] >UniRef100_C1BKA8 DNA-directed RNA polymerase I 40 kDa polypeptide n=1 Tax=Osmerus mordax RepID=C1BKA8_OSMMO Length = 351 Score = 67.8 bits (164), Expect = 4e-10 Identities = 33/65 (50%), Positives = 45/65 (69%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 GK A V R T +E +R DDL + V L V++HFIF++ESTG LPP+V+ TEA+K+ Sbjct: 274 GKVIAKVVNSRPDTCSREVLRHDDLKNLVKLARVRDHFIFSVESTGILPPDVVVTEAIKV 333 Query: 132 LEAKC 118 L +KC Sbjct: 334 LMSKC 338 [57][TOP] >UniRef100_B2WCA1 DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2WCA1_PYRTR Length = 376 Score = 67.8 bits (164), Expect = 4e-10 Identities = 30/69 (43%), Positives = 46/69 (66%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G+ +A VA P T+ +EC+R + D V LG +++HFIF +ESTG + LF E+VK Sbjct: 299 EGEPKAVVANPMNDTVSRECLRHPEFKDKVKLGRIRDHFIFRVESTGQWESDELFLESVK 358 Query: 135 ILEAKCEAI 109 +L+ KC+ I Sbjct: 359 LLKIKCQRI 367 [58][TOP] >UniRef100_UPI000186EDAD DNA-directed RNA polymerase I 40 kDa polypeptide, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186EDAD Length = 347 Score = 67.0 bits (162), Expect = 6e-10 Identities = 33/66 (50%), Positives = 45/66 (68%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G+K A VA R + + R +DL D V++ V+NHFIFNIES G++PP LF EAVK Sbjct: 263 EGEKEAYVASARYDSGSRIVFRQEDLKDCVEMKRVRNHFIFNIESVGAIPPNELFVEAVK 322 Query: 135 ILEAKC 118 +L+ KC Sbjct: 323 VLKNKC 328 [59][TOP] >UniRef100_Q4X0E8 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=1 Tax=Aspergillus fumigatus RepID=Q4X0E8_ASPFU Length = 374 Score = 67.0 bits (162), Expect = 6e-10 Identities = 29/65 (44%), Positives = 44/65 (67%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G+ +A V P K T+ +EC+R ++ V LG +++HFIFN+ESTG + LF E+VK+ Sbjct: 298 GEMKAVVRDPFKDTVSRECLRHEEFQGKVKLGRIRDHFIFNVESTGQFESDYLFLESVKV 357 Query: 132 LEAKC 118 L+ KC Sbjct: 358 LKLKC 362 [60][TOP] >UniRef100_B8NHK8 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=2 Tax=Aspergillus RepID=B8NHK8_ASPFN Length = 373 Score = 67.0 bits (162), Expect = 6e-10 Identities = 31/66 (46%), Positives = 45/66 (68%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G+ +A V K T+ +EC+R ++ V LG V++HFIFNIESTG +VLF E+VK Sbjct: 296 EGETKAVVRDAFKDTVSRECLRHEEFQGKVKLGRVRDHFIFNIESTGQFDSDVLFLESVK 355 Query: 135 ILEAKC 118 +L+ KC Sbjct: 356 VLKLKC 361 [61][TOP] >UniRef100_B0XTN4 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=1 Tax=Aspergillus fumigatus A1163 RepID=B0XTN4_ASPFC Length = 414 Score = 67.0 bits (162), Expect = 6e-10 Identities = 29/65 (44%), Positives = 44/65 (67%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G+ +A V P K T+ +EC+R ++ V LG +++HFIFN+ESTG + LF E+VK+ Sbjct: 338 GEMKAVVRDPFKDTVSRECLRHEEFQGKVKLGRIRDHFIFNVESTGQFESDYLFLESVKV 397 Query: 132 LEAKC 118 L+ KC Sbjct: 398 LKLKC 402 [62][TOP] >UniRef100_A1DHS7 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1DHS7_NEOFI Length = 374 Score = 67.0 bits (162), Expect = 6e-10 Identities = 29/65 (44%), Positives = 44/65 (67%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G+ +A V P K T+ +EC+R ++ V LG +++HFIFN+ESTG + LF E+VK+ Sbjct: 298 GEMKAVVRDPFKDTVSRECLRHEEFQGKVKLGRIRDHFIFNVESTGQFESDYLFLESVKV 357 Query: 132 LEAKC 118 L+ KC Sbjct: 358 LKLKC 362 [63][TOP] >UniRef100_UPI0000E468FB PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E468FB Length = 335 Score = 66.6 bits (161), Expect = 8e-10 Identities = 32/62 (51%), Positives = 45/62 (72%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A VA PR+ T +E DDL D V L +++HFIF++ESTG+L PEVL +EA+ IL++K Sbjct: 258 AVVACPRRDTCGREVFSHDDLKDCVKLNRIRDHFIFSVESTGALRPEVLVSEAINILKSK 317 Query: 120 CE 115 C+ Sbjct: 318 CK 319 [64][TOP] >UniRef100_A2QD13 Complex: RCP40 of S. cerevisiae associates with RCP19 of S. cerevisiae n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2QD13_ASPNC Length = 359 Score = 66.6 bits (161), Expect = 8e-10 Identities = 30/66 (45%), Positives = 44/66 (66%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G+ +A V P K T+ +EC+R ++ V LG V++HFIFNIES G + LF E+VK Sbjct: 282 EGELKAVVVDPFKDTVSRECLRHEEFQGKVKLGRVRDHFIFNIESVGQFESDTLFLESVK 341 Query: 135 ILEAKC 118 +L+ KC Sbjct: 342 VLKLKC 347 [65][TOP] >UniRef100_B5X7Z3 DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Salmo salar RepID=B5X7Z3_SALSA Length = 353 Score = 66.2 bits (160), Expect = 1e-09 Identities = 33/66 (50%), Positives = 44/66 (66%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 GK A V R T +E +R DDL + V L V++HFIF++ESTG L P+VL TEA+K+ Sbjct: 276 GKVVAKVVNSRLDTCSREVLRHDDLKNAVKLARVRDHFIFSVESTGILAPDVLVTEAIKV 335 Query: 132 LEAKCE 115 L KC+ Sbjct: 336 LMTKCQ 341 [66][TOP] >UniRef100_UPI0001B7A7D1 UPI0001B7A7D1 related cluster n=1 Tax=Rattus norvegicus RepID=UPI0001B7A7D1 Length = 260 Score = 65.9 bits (159), Expect = 1e-09 Identities = 34/71 (47%), Positives = 45/71 (63%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +GKK A VA R T +E R + L V L V++H+IF++ESTG LPP+VL +EA+K Sbjct: 182 QGKKVARVANARLDTFSREIFRHEKLKKAVRLARVRDHYIFSVESTGVLPPDVLVSEAIK 241 Query: 135 ILEAKCEAIPD 103 IL KC D Sbjct: 242 ILMGKCRRFLD 252 [67][TOP] >UniRef100_Q5RJK9 Polymerase (RNA) I polypeptide C n=2 Tax=Rattus norvegicus RepID=Q5RJK9_RAT Length = 346 Score = 65.9 bits (159), Expect = 1e-09 Identities = 34/71 (47%), Positives = 45/71 (63%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +GKK A VA R T +E R + L V L V++H+IF++ESTG LPP+VL +EA+K Sbjct: 268 QGKKVARVANARLDTFSREIFRHEKLKKAVRLARVRDHYIFSVESTGVLPPDVLVSEAIK 327 Query: 135 ILEAKCEAIPD 103 IL KC D Sbjct: 328 ILMGKCRRFLD 338 [68][TOP] >UniRef100_A1L3C2 Polr1c protein n=2 Tax=Mus musculus RepID=A1L3C2_MOUSE Length = 347 Score = 65.9 bits (159), Expect = 1e-09 Identities = 34/71 (47%), Positives = 45/71 (63%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +GKK A VA R T +E R + L V L V++H+IF++ESTG LPP+VL +EA+K Sbjct: 269 QGKKVARVANARLDTFSREIFRHEKLKKAVRLARVRDHYIFSVESTGVLPPDVLVSEAIK 328 Query: 135 ILEAKCEAIPD 103 IL KC D Sbjct: 329 ILMGKCRRFLD 339 [69][TOP] >UniRef100_A2ER03 RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein n=1 Tax=Trichomonas vaginalis G3 RepID=A2ER03_TRIVA Length = 341 Score = 65.9 bits (159), Expect = 1e-09 Identities = 28/63 (44%), Positives = 40/63 (63%) Frame = -1 Query: 303 RATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEA 124 + V PRKCT C+EC+R+ L +V LG NH+ F +ES G P VL EA++IL+ Sbjct: 267 KLVVRSPRKCTTCRECIRNPSLAHYVSLGKEANHYEFTVESVGVRPAYVLVKEALQILQN 326 Query: 123 KCE 115 +C+ Sbjct: 327 RCD 329 [70][TOP] >UniRef100_P52432 DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Mus musculus RepID=RPAC1_MOUSE Length = 346 Score = 65.9 bits (159), Expect = 1e-09 Identities = 34/71 (47%), Positives = 45/71 (63%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +GKK A VA R T +E R + L V L V++H+IF++ESTG LPP+VL +EA+K Sbjct: 268 QGKKVARVANARLDTFSREIFRHEKLKKAVRLARVRDHYIFSVESTGVLPPDVLVSEAIK 327 Query: 135 ILEAKCEAIPD 103 IL KC D Sbjct: 328 ILMGKCRRFLD 338 [71][TOP] >UniRef100_UPI00019261EE PREDICTED: similar to DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Hydra magnipapillata RepID=UPI00019261EE Length = 354 Score = 65.5 bits (158), Expect = 2e-09 Identities = 33/65 (50%), Positives = 45/65 (69%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G RA V PRK + +E R++ L V L V++HFI+++ESTG+LPP+VL EA+KI Sbjct: 278 GITRAVVDNPRKDSGMREIYRNEILKKIVKLEKVRDHFIYSVESTGALPPDVLVEEAIKI 337 Query: 132 LEAKC 118 L AKC Sbjct: 338 LHAKC 342 [72][TOP] >UniRef100_Q6IP84 MGC78824 protein n=1 Tax=Xenopus laevis RepID=Q6IP84_XENLA Length = 347 Score = 65.5 bits (158), Expect = 2e-09 Identities = 31/70 (44%), Positives = 45/70 (64%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 GK+ A V R T +E R DDL + V + V++H+IF++ESTG LPP++L +EA+K+ Sbjct: 270 GKRVARVENARMDTCSREIFRHDDLKNLVRMARVRDHYIFSVESTGILPPDILVSEAIKV 329 Query: 132 LEAKCEAIPD 103 L KC D Sbjct: 330 LMGKCRRFLD 339 [73][TOP] >UniRef100_C8VNX6 DNA-directed RNA polymerase I and III subunit Rpc40, putative (AFU_orthologue; AFUA_2G13720) n=2 Tax=Emericella nidulans RepID=C8VNX6_EMENI Length = 373 Score = 65.5 bits (158), Expect = 2e-09 Identities = 30/65 (46%), Positives = 43/65 (66%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G+ +A V T+ +EC+R D+ V LG +++HFIFNIESTG +VLF E+VK+ Sbjct: 297 GELKAVVRDAFNDTVSRECLRHDEFKGKVKLGRIRDHFIFNIESTGQFDSDVLFLESVKV 356 Query: 132 LEAKC 118 L+ KC Sbjct: 357 LKLKC 361 [74][TOP] >UniRef100_B0EJB9 DNA-directed RNA polymerases I and III subunit RPAC1, putative n=1 Tax=Entamoeba dispar SAW760 RepID=B0EJB9_ENTDI Length = 291 Score = 65.1 bits (157), Expect = 2e-09 Identities = 26/62 (41%), Positives = 46/62 (74%) Frame = -1 Query: 294 VAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAKCE 115 V PR C +C+EC+R++ +++ LG +NH++F++ESTG P + +F+EAVKI+++K E Sbjct: 218 VKNPRNCKMCRECIREERS-EYIKLGREENHYLFSVESTGIYPAKEIFSEAVKIMKSKAE 276 Query: 114 AI 109 + Sbjct: 277 KL 278 [75][TOP] >UniRef100_B3LK74 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=3 Tax=Saccharomyces cerevisiae RepID=B3LK74_YEAS1 Length = 335 Score = 64.7 bits (156), Expect = 3e-09 Identities = 30/67 (44%), Positives = 46/67 (68%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G A V RK T+ +E +R ++ D V LG V+NHFIFN+ES+G++ PE +F ++V+ Sbjct: 260 EGSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIFNVESSGAMTPEEIFFKSVR 319 Query: 135 ILEAKCE 115 IL+ K E Sbjct: 320 ILKNKAE 326 [76][TOP] >UniRef100_A1C7I5 DNA-directed RNA polymerase I and III subunit Rpc40, putative n=1 Tax=Aspergillus clavatus RepID=A1C7I5_ASPCL Length = 374 Score = 64.7 bits (156), Expect = 3e-09 Identities = 28/65 (43%), Positives = 43/65 (66%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G+ +A V P T+ +EC+R ++ V LG +++HFIFN+ESTG + LF E+VK+ Sbjct: 298 GELKAVVRDPFNDTVSRECLRHEEFQGKVKLGRIRDHFIFNVESTGQFESDYLFLESVKV 357 Query: 132 LEAKC 118 L+ KC Sbjct: 358 LKLKC 362 [77][TOP] >UniRef100_UPI00004DA7E9 DNA-directed RNA polymerases I and III subunit RPAC1 (RNA polymerases I and III subunit AC1) (DNA-directed RNA polymerase I subunit C) (DNA- directed RNA polymerases I and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40) (AC40). n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00004DA7E9 Length = 347 Score = 64.3 bits (155), Expect = 4e-09 Identities = 31/70 (44%), Positives = 45/70 (64%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 GK+ A V R T +E R DDL D V + V++++IF++ESTG LPP++L +EA+K+ Sbjct: 270 GKRVARVINARTDTCGREIFRHDDLKDLVRMARVRDYYIFSVESTGILPPDILVSEAIKV 329 Query: 132 LEAKCEAIPD 103 L KC D Sbjct: 330 LMGKCRRFLD 339 [78][TOP] >UniRef100_P07703 DNA-directed RNA polymerases I and III subunit RPAC1 n=3 Tax=Saccharomyces cerevisiae RepID=RPAC1_YEAST Length = 335 Score = 64.3 bits (155), Expect = 4e-09 Identities = 30/67 (44%), Positives = 45/67 (67%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G A V RK T+ +E +R ++ D V LG V+NHFIFN+ES G++ PE +F ++V+ Sbjct: 260 EGSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIFNVESAGAMTPEEIFFKSVR 319 Query: 135 ILEAKCE 115 IL+ K E Sbjct: 320 ILKNKAE 326 [79][TOP] >UniRef100_B6GYD0 Pc12g12250 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6GYD0_PENCW Length = 374 Score = 63.9 bits (154), Expect = 5e-09 Identities = 27/65 (41%), Positives = 44/65 (67%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G+++A V T+ +EC+R ++ V LG V++HFIFN+ESTG ++LF EA+K+ Sbjct: 298 GEQKAVVKDAFNDTVSRECLRHEEFQGKVKLGRVRDHFIFNVESTGQFESDMLFLEAIKV 357 Query: 132 LEAKC 118 ++ KC Sbjct: 358 MKLKC 362 [80][TOP] >UniRef100_UPI00015B4B82 PREDICTED: similar to bifunctional aminoacyl-tRNA synthetase n=1 Tax=Nasonia vitripennis RepID=UPI00015B4B82 Length = 1549 Score = 63.5 bits (153), Expect = 7e-09 Identities = 32/64 (50%), Positives = 40/64 (62%) Frame = -1 Query: 306 KRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILE 127 K A V R + + R DDL D V LG V +HFIF +ES G+LP VLF EAVK+L+ Sbjct: 1476 KEARVKNARYDSCSRNVFRHDDLKDCVQLGRVPDHFIFTVESVGALPSSVLFIEAVKVLK 1535 Query: 126 AKCE 115 KC+ Sbjct: 1536 KKCK 1539 [81][TOP] >UniRef100_A7ECC0 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7ECC0_SCLS1 Length = 387 Score = 63.5 bits (153), Expect = 7e-09 Identities = 29/68 (42%), Positives = 44/68 (64%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G+K+A V + T+ +EC+R ++ V LG V++HFIF+IES G + LF E++K Sbjct: 310 EGEKKAVVVDAMRDTVSRECLRHEEFQGKVKLGRVRDHFIFSIESLGQWDSDELFLESIK 369 Query: 135 ILEAKCEA 112 L KCEA Sbjct: 370 TLRTKCEA 377 [82][TOP] >UniRef100_Q6CQS0 KLLA0D14861p n=1 Tax=Kluyveromyces lactis RepID=Q6CQS0_KLULA Length = 334 Score = 63.2 bits (152), Expect = 9e-09 Identities = 29/65 (44%), Positives = 45/65 (69%) Frame = -1 Query: 309 KKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKIL 130 K A + PRK T+ +E +R D+ V LG V++HFIFN+ES+G++ PE +F ++V+IL Sbjct: 261 KGEAYIKDPRKDTVSREVLRHDEFQGKVKLGRVRDHFIFNVESSGAMTPEEIFFKSVRIL 320 Query: 129 EAKCE 115 + K E Sbjct: 321 KNKAE 325 [83][TOP] >UniRef100_UPI00005A26F7 PREDICTED: similar to DNA-directed RNA polymerase I 40 kDa polypeptide (RPA40) (RPA39) isoform 5 n=1 Tax=Canis lupus familiaris RepID=UPI00005A26F7 Length = 338 Score = 62.8 bits (151), Expect = 1e-08 Identities = 31/66 (46%), Positives = 42/66 (63%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A VA PR T +E R + L V L V++H+IF++ESTG LPP+VL +EA+K+L K Sbjct: 265 ARVANPRLDTFSREVFRKEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKVLMGK 324 Query: 120 CEAIPD 103 C D Sbjct: 325 CRRFLD 330 [84][TOP] >UniRef100_Q0CY78 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0CY78_ASPTN Length = 374 Score = 62.8 bits (151), Expect = 1e-08 Identities = 28/66 (42%), Positives = 44/66 (66%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G+ +A V T+ +EC+R ++ V LG V++HFIFN+ES+G +VLF E+VK Sbjct: 297 EGEMKAVVRDAFNDTVSRECLRHEEFQGKVKLGRVRDHFIFNVESSGQFNSDVLFLESVK 356 Query: 135 ILEAKC 118 +L+ KC Sbjct: 357 VLKLKC 362 [85][TOP] >UniRef100_UPI000186AA5B hypothetical protein BRAFLDRAFT_133039 n=1 Tax=Branchiostoma floridae RepID=UPI000186AA5B Length = 308 Score = 62.4 bits (150), Expect = 1e-08 Identities = 31/65 (47%), Positives = 41/65 (63%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G K+A V R T +E R DL D V L +++HFIF++ESTG+L P+VL EA K+ Sbjct: 225 GVKKARVVNSRLDTCSREIFRHPDLKDCVKLNKLRDHFIFSVESTGALAPDVLVCEATKV 284 Query: 132 LEAKC 118 L KC Sbjct: 285 LMGKC 289 [86][TOP] >UniRef100_C3Z3J6 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3Z3J6_BRAFL Length = 290 Score = 62.4 bits (150), Expect = 1e-08 Identities = 31/65 (47%), Positives = 41/65 (63%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G K+A V R T +E R DL D V L +++HFIF++ESTG+L P+VL EA K+ Sbjct: 207 GVKKARVVNSRLDTCSREIFRHPDLKDCVKLNKLRDHFIFSVESTGALAPDVLVCEATKV 266 Query: 132 LEAKC 118 L KC Sbjct: 267 LMGKC 271 [87][TOP] >UniRef100_C5LDA1 DNA-directed RNA polymerases I and III 40 kDa polypeptide, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LDA1_9ALVE Length = 365 Score = 62.0 bits (149), Expect = 2e-08 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDD-LVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEA 124 A V PR CT C++C+ + D V LG +K+HFIF +ES G +P +F +A +++ Sbjct: 271 AVVKNPRACTTCRQCIEPGNGFADKVSLGKLKDHFIFTVESVGQIPAPQIFAQAAVVMQN 330 Query: 123 KCEAI 109 KC + Sbjct: 331 KCRLV 335 [88][TOP] >UniRef100_C5L9Q7 DNA-directed RNA polymerase I, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5L9Q7_9ALVE Length = 310 Score = 62.0 bits (149), Expect = 2e-08 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDD-LVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEA 124 A V PR CT C++C+ + D V LG +K+HFIF +ES G +P +F +A +++ Sbjct: 216 AVVKNPRACTTCRQCIEPGNGFADKVSLGKLKDHFIFTVESVGQIPAPQIFAQAAVVMQN 275 Query: 123 KCEAI 109 KC + Sbjct: 276 KCRLV 280 [89][TOP] >UniRef100_A6RP60 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6RP60_BOTFB Length = 389 Score = 61.2 bits (147), Expect = 3e-08 Identities = 28/68 (41%), Positives = 43/68 (63%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G+ +A V + T+ +EC+R ++ V LG V++HFIF+IES G + LF E++K Sbjct: 312 EGEDKAVVVDAMRDTVSRECLRHEEFQGKVKLGRVRDHFIFSIESLGQWDSDELFLESIK 371 Query: 135 ILEAKCEA 112 L KCEA Sbjct: 372 TLRTKCEA 379 [90][TOP] >UniRef100_C1E0F4 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E0F4_9CHLO Length = 394 Score = 60.5 bits (145), Expect = 6e-08 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 4/73 (5%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVR----DDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFT 148 KG+K V R C C E VR + + V + K+HFIF +E+ G LPP+VLF Sbjct: 318 KGEKCVKVVNERGCDYCLERVRTLCGEPGWDEKVRVLKSKSHFIFTVETAGQLPPDVLFK 377 Query: 147 EAVKILEAKCEAI 109 EAVK+L +KC+++ Sbjct: 378 EAVKVLASKCQSV 390 [91][TOP] >UniRef100_UPI000151BDE7 conserved hypothetical protein n=1 Tax=Pichia guilliermondii ATCC 6260 RepID=UPI000151BDE7 Length = 333 Score = 60.1 bits (144), Expect = 7e-08 Identities = 26/62 (41%), Positives = 44/62 (70%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V RK T+ +E +R ++ V LG +++HFIFN+ESTG++PPE +F ++V++L+ K Sbjct: 263 AFVKDARKDTVSREVLRHEEFNGKVKLGRIRDHFIFNVESTGAMPPEEIFFKSVRVLKNK 322 Query: 120 CE 115 + Sbjct: 323 AD 324 [92][TOP] >UniRef100_A5DPW5 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii RepID=A5DPW5_PICGU Length = 333 Score = 60.1 bits (144), Expect = 7e-08 Identities = 26/62 (41%), Positives = 44/62 (70%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V RK T+ +E +R ++ V LG +++HFIFN+ESTG++PPE +F ++V++L+ K Sbjct: 263 AFVKDARKDTVSREVLRHEEFNGKVKLGRIRDHFIFNVESTGAMPPEEIFFKSVRVLKNK 322 Query: 120 CE 115 + Sbjct: 323 AD 324 [93][TOP] >UniRef100_UPI00002223F9 Hypothetical protein CBG01436 n=1 Tax=Caenorhabditis briggsae AF16 RepID=UPI00002223F9 Length = 367 Score = 59.7 bits (143), Expect = 1e-07 Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Frame = -1 Query: 315 KGKKR-ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAV 139 KG KR A V RK T + R +DL V LG K HFIF++ESTG+L L EA Sbjct: 289 KGAKRIAVVKDARKDTCSRNVFRHEDLAKVVQLGKNKQHFIFSVESTGALKSAELVVEAC 348 Query: 138 KILEAKCEAI 109 K++E KC ++ Sbjct: 349 KVMETKCRSL 358 [94][TOP] >UniRef100_A8WQE9 Putative uncharacterized protein n=1 Tax=Caenorhabditis briggsae RepID=A8WQE9_CAEBR Length = 698 Score = 59.7 bits (143), Expect = 1e-07 Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Frame = -1 Query: 315 KGKKR-ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAV 139 KG KR A V RK T + R +DL V LG K HFIF++ESTG+L L EA Sbjct: 620 KGAKRIAVVKDARKDTCSRNVFRHEDLAKVVQLGKNKQHFIFSVESTGALKSAELVVEAC 679 Query: 138 KILEAKCEAI 109 K++E KC ++ Sbjct: 680 KVMETKCRSL 689 [95][TOP] >UniRef100_C4R920 RNA polymerase subunit, common to RNA polymerase I and III n=1 Tax=Pichia pastoris GS115 RepID=C4R920_PICPG Length = 335 Score = 59.7 bits (143), Expect = 1e-07 Identities = 27/63 (42%), Positives = 42/63 (66%) Frame = -1 Query: 303 RATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEA 124 +A V R+ T+ +EC+R + V L ++HFIFN+ESTG +PPE +F ++V+IL+ Sbjct: 262 QAVVKDARRDTVSRECLRHPEFEGKVKLARQRDHFIFNVESTGCMPPEEIFFKSVRILKN 321 Query: 123 KCE 115 K E Sbjct: 322 KAE 324 [96][TOP] >UniRef100_Q29L21 GA17664 n=1 Tax=Drosophila pseudoobscura pseudoobscura RepID=Q29L21_DROPS Length = 333 Score = 59.3 bits (142), Expect = 1e-07 Identities = 30/66 (45%), Positives = 40/66 (60%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V R + + R L D V LG V++H+IF +ES GSL P+V+F EAVK+L+ K Sbjct: 263 AYVKDARYDSCSRNVYRYPQLEDSVTLGRVRDHYIFTVESVGSLKPDVIFLEAVKVLKKK 322 Query: 120 CEAIPD 103 C A D Sbjct: 323 CRAFID 328 [97][TOP] >UniRef100_Q75A87 ADR031Cp n=1 Tax=Eremothecium gossypii RepID=Q75A87_ASHGO Length = 364 Score = 59.3 bits (142), Expect = 1e-07 Identities = 29/65 (44%), Positives = 43/65 (66%) Frame = -1 Query: 309 KKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKIL 130 K A V RK T+ +E +R +L V LG V++HFIFN+ES G++ PE +F ++V+IL Sbjct: 291 KGEAFVQDARKDTVSREVLRHPELEQKVKLGRVRDHFIFNVESAGAMTPEEIFFKSVRIL 350 Query: 129 EAKCE 115 + K E Sbjct: 351 KNKAE 355 [98][TOP] >UniRef100_Q5KIG6 Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans RepID=Q5KIG6_CRYNE Length = 350 Score = 59.3 bits (142), Expect = 1e-07 Identities = 28/70 (40%), Positives = 42/70 (60%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G+ + V PRK T+ +E +R + D V L +++HFIFN+ES G PE L EA+KI Sbjct: 268 GEDQCVVKNPRKDTVSREVLRHPEFQDLVQLARIRDHFIFNVESAGQYSPEELVPEAIKI 327 Query: 132 LEAKCEAIPD 103 L K + + + Sbjct: 328 LLGKIKDVEE 337 [99][TOP] >UniRef100_C5DTY7 ZYRO0C12364p n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5DTY7_ZYGRC Length = 335 Score = 59.3 bits (142), Expect = 1e-07 Identities = 26/62 (41%), Positives = 44/62 (70%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V RK T+ +E +R ++ + V LG V++HF+FN+ESTG++ PE +F ++V++L+ K Sbjct: 265 AYVQDARKDTVSREVLRHEEFSNKVKLGRVRDHFVFNVESTGAMTPEEIFFKSVRVLKNK 324 Query: 120 CE 115 E Sbjct: 325 AE 326 [100][TOP] >UniRef100_Q9UAY9 Putative uncharacterized protein n=1 Tax=Caenorhabditis elegans RepID=Q9UAY9_CAEEL Length = 366 Score = 58.9 bits (141), Expect = 2e-07 Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Frame = -1 Query: 315 KGKKR-ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAV 139 KG KR A V RK T + R +DL V LG K HFIF++ESTG+L L EA Sbjct: 288 KGAKRIAVVKDARKDTCSRNVFRHEDLSKVVQLGKNKQHFIFSVESTGALKSSELVVEAC 347 Query: 138 KILEAKCEAI 109 K++E KC ++ Sbjct: 348 KVMEIKCRSL 357 [101][TOP] >UniRef100_C1MRA1 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MRA1_9CHLO Length = 410 Score = 58.5 bits (140), Expect = 2e-07 Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 4/70 (5%) Frame = -1 Query: 306 KRATVAQPRKCTLCKECVR----DDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAV 139 +R R C C E VR + + V L K+HFIF +ESTG +PPE++F EAV Sbjct: 337 RRVVAKNERGCEFCVERVRALSGEPGWEEKVQLLKKKDHFIFTVESTGQMPPELIFKEAV 396 Query: 138 KILEAKCEAI 109 +L +KC+++ Sbjct: 397 NVLASKCQSV 406 [102][TOP] >UniRef100_B8CCH8 Dna-directed RNA polymerase I 40kDa polypeptide, rpo1-1-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8CCH8_THAPS Length = 351 Score = 58.5 bits (140), Expect = 2e-07 Identities = 24/64 (37%), Positives = 42/64 (65%) Frame = -1 Query: 309 KKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKIL 130 K +A ++ P CT+ + +R+ L + + + V NHFIF++ES G + P V+ +EA+K+L Sbjct: 288 KVKAELSNPYACTMSRNYMRNPTLKESIKMSRVPNHFIFSVESVGMMEPAVIVSEALKVL 347 Query: 129 EAKC 118 + KC Sbjct: 348 KEKC 351 [103][TOP] >UniRef100_B5Y3D1 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y3D1_PHATR Length = 319 Score = 58.5 bits (140), Expect = 2e-07 Identities = 25/69 (36%), Positives = 41/69 (59%) Frame = -1 Query: 306 KRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILE 127 ++A V P CT+ + +R +L V + + +HFIF++ES G P VL EA++IL+ Sbjct: 240 RKARVCNPYACTMSRNYMRHTELAQAVRMSRIPDHFIFSVESVGMYAPGVLVAEALRILQ 299 Query: 126 AKCEAIPDF 100 KC + D+ Sbjct: 300 RKCRKVMDY 308 [104][TOP] >UniRef100_Q171Q8 DNA-directed RNA polymerase n=1 Tax=Aedes aegypti RepID=Q171Q8_AEDAE Length = 335 Score = 58.2 bits (139), Expect = 3e-07 Identities = 28/67 (41%), Positives = 40/67 (59%) Frame = -1 Query: 303 RATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEA 124 +A V R + + R + D V L V+NHFIFN+ES G+L P+V+F EA K+L+ Sbjct: 264 QAYVKDARYDSCSRNVYRYPQIADAVTLSRVRNHFIFNVESLGALKPDVIFVEAAKVLKK 323 Query: 123 KCEAIPD 103 KC+ D Sbjct: 324 KCKMFLD 330 [105][TOP] >UniRef100_Q6FXP6 Strain CBS138 chromosome B complete sequence n=1 Tax=Candida glabrata RepID=Q6FXP6_CANGA Length = 334 Score = 58.2 bits (139), Expect = 3e-07 Identities = 26/62 (41%), Positives = 42/62 (67%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V PRK T+ +E +R ++ V LG V++HF+FN+ESTG++ PE + +++ IL+ K Sbjct: 264 AYVLDPRKDTVSREVLRHEEFEGKVKLGRVRDHFVFNVESTGAMQPEDIVLKSIDILKKK 323 Query: 120 CE 115 E Sbjct: 324 AE 325 [106][TOP] >UniRef100_C5DLD4 KLTH0F12056p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DLD4_LACTC Length = 350 Score = 58.2 bits (139), Expect = 3e-07 Identities = 28/62 (45%), Positives = 41/62 (66%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V R T+ +E +R ++ V LG VKNHFIFN+ES G++ PE +F ++V+IL+ K Sbjct: 280 AFVKDARHDTVSREVLRHEEFEGKVKLGRVKNHFIFNVESAGAMTPEEIFFKSVRILKNK 339 Query: 120 CE 115 E Sbjct: 340 AE 341 [107][TOP] >UniRef100_Q9VMX3 CG3756 n=1 Tax=Drosophila melanogaster RepID=Q9VMX3_DROME Length = 333 Score = 57.4 bits (137), Expect = 5e-07 Identities = 28/66 (42%), Positives = 41/66 (62%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V R T + R L D V L +++H+IF++ES G+L P+V+F EAVK+L+ K Sbjct: 263 AYVKDARYDTCSRNVYRYPQLNDAVTLARIRDHYIFSVESVGALKPDVIFLEAVKVLKRK 322 Query: 120 CEAIPD 103 C A+ D Sbjct: 323 CRALID 328 [108][TOP] >UniRef100_B4Q356 GD23312 n=1 Tax=Drosophila simulans RepID=B4Q356_DROSI Length = 333 Score = 57.4 bits (137), Expect = 5e-07 Identities = 28/66 (42%), Positives = 41/66 (62%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V R T + R L D V L +++H+IF++ES G+L P+V+F EAVK+L+ K Sbjct: 263 AYVKDARYDTCSRNVYRYPQLNDAVTLARIRDHYIFSVESVGALKPDVIFLEAVKVLKRK 322 Query: 120 CEAIPD 103 C A+ D Sbjct: 323 CRALID 328 [109][TOP] >UniRef100_B4LUA3 GJ24400 n=1 Tax=Drosophila virilis RepID=B4LUA3_DROVI Length = 333 Score = 57.4 bits (137), Expect = 5e-07 Identities = 28/66 (42%), Positives = 40/66 (60%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V R + + R L D V + V++H+IFN+ES G+L PEV+F EAVK+L+ K Sbjct: 263 AYVKDARYDSCSRNVYRYPHLADAVTMARVRDHYIFNVESVGALKPEVIFLEAVKVLKKK 322 Query: 120 CEAIPD 103 C + D Sbjct: 323 CRSFID 328 [110][TOP] >UniRef100_B4I197 GM18508 n=1 Tax=Drosophila sechellia RepID=B4I197_DROSE Length = 331 Score = 57.4 bits (137), Expect = 5e-07 Identities = 28/66 (42%), Positives = 41/66 (62%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V R T + R L D V L +++H+IF++ES G+L P+V+F EAVK+L+ K Sbjct: 261 AYVKDARYDTCSRNVYRYPQLNDAVTLARIRDHYIFSVESVGALKPDVIFLEAVKVLKRK 320 Query: 120 CEAIPD 103 C A+ D Sbjct: 321 CRALID 326 [111][TOP] >UniRef100_A7TPZ5 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TPZ5_VANPO Length = 320 Score = 57.4 bits (137), Expect = 5e-07 Identities = 28/62 (45%), Positives = 41/62 (66%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V RK T+ +E +R ++ D V L V+NHFIFNIE+ G++ E +F ++VKIL+ K Sbjct: 250 AYVKDARKDTMTREVLRHEEFQDKVKLDRVRNHFIFNIETVGAMSAEEIFLKSVKILKNK 309 Query: 120 CE 115 E Sbjct: 310 AE 311 [112][TOP] >UniRef100_UPI0000DB7696 PREDICTED: similar to RNA polymerase 1-1 n=1 Tax=Apis mellifera RepID=UPI0000DB7696 Length = 347 Score = 57.0 bits (136), Expect = 6e-07 Identities = 27/64 (42%), Positives = 39/64 (60%) Frame = -1 Query: 306 KRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILE 127 + A V PR + + + +DL + L ++NH IF IES G+L P VLF EA+KIL+ Sbjct: 273 REARVKNPRYDSCSRNVFQHEDLKGCIRLNRIRNHIIFTIESVGTLLPSVLFVEAIKILK 332 Query: 126 AKCE 115 KC+ Sbjct: 333 GKCK 336 [113][TOP] >UniRef100_UPI000023F302 hypothetical protein FG00365.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023F302 Length = 381 Score = 57.0 bits (136), Expect = 6e-07 Identities = 28/69 (40%), Positives = 43/69 (62%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 KG+ +A V K T+ +E +R ++ V LG ++HFIF+IESTG + LF E+VK Sbjct: 304 KGETKAVVVDAMKDTVSREALRHEEFQGKVKLGRRRDHFIFSIESTGQWDSDELFLESVK 363 Query: 135 ILEAKCEAI 109 L+ KC+ + Sbjct: 364 HLKLKCKKL 372 [114][TOP] >UniRef100_B0W725 DNA-directed RNA polymerase I 40 kDa polypeptide n=1 Tax=Culex quinquefasciatus RepID=B0W725_CULQU Length = 335 Score = 57.0 bits (136), Expect = 6e-07 Identities = 27/67 (40%), Positives = 39/67 (58%) Frame = -1 Query: 303 RATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEA 124 +A V R + + R L D V + V+NHFIFN+ES G+L P+ +F EA K+L+ Sbjct: 264 QAYVKDARYDSCSRNVYRYPQLADSVTMSRVRNHFIFNVESLGALKPDAIFVEAAKVLKK 323 Query: 123 KCEAIPD 103 KC+ D Sbjct: 324 KCKMFLD 330 [115][TOP] >UniRef100_Q6BV37 DEHA2C05654p n=1 Tax=Debaryomyces hansenii RepID=Q6BV37_DEBHA Length = 335 Score = 57.0 bits (136), Expect = 6e-07 Identities = 26/62 (41%), Positives = 42/62 (67%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V RK T+ +E +R ++ V LG ++HFIFN+ESTG++ PE +F ++V++L+ K Sbjct: 265 AVVKDSRKDTVSREVLRHEEFNGKVKLGRKRDHFIFNVESTGAMSPEEIFFKSVRVLKNK 324 Query: 120 CE 115 E Sbjct: 325 AE 326 [116][TOP] >UniRef100_B6KLD3 DNA-directed RNA polymerases I and III subunit RPAC1, putative n=2 Tax=Toxoplasma gondii RepID=B6KLD3_TOXGO Length = 346 Score = 56.6 bits (135), Expect = 8e-07 Identities = 25/55 (45%), Positives = 38/55 (69%) Frame = -1 Query: 285 PRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 PR CT C+ C+ + ++L +K+HFIF+IESTGS+P +LF A++IL+ K Sbjct: 278 PRNCTTCRACI--ERFPKEIELRKIKDHFIFSIESTGSVPAPLLFKMAIEILKEK 330 [117][TOP] >UniRef100_B4NW96 GE11271 n=1 Tax=Drosophila yakuba RepID=B4NW96_DROYA Length = 333 Score = 56.6 bits (135), Expect = 8e-07 Identities = 28/66 (42%), Positives = 40/66 (60%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V R T + R L D V L +++H+IF++ES G+L P+V+F EAVK+L+ K Sbjct: 263 AYVKDARYDTCSRNVYRYPQLNDAVTLARIRDHYIFSVESVGALKPDVIFLEAVKVLKRK 322 Query: 120 CEAIPD 103 C A D Sbjct: 323 CRAFID 328 [118][TOP] >UniRef100_B4KGY1 GI17014 n=1 Tax=Drosophila mojavensis RepID=B4KGY1_DROMO Length = 333 Score = 56.6 bits (135), Expect = 8e-07 Identities = 27/66 (40%), Positives = 41/66 (62%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V R + + R L D V +G V++H+IF++ES G+L PEV+F EAV++L+ K Sbjct: 263 AYVKDARYDSCSRNVFRYPHLADAVTMGRVRDHYIFSVESVGALKPEVIFLEAVRVLKKK 322 Query: 120 CEAIPD 103 C + D Sbjct: 323 CRSFID 328 [119][TOP] >UniRef100_B3N4C9 GG25034 n=1 Tax=Drosophila erecta RepID=B3N4C9_DROER Length = 329 Score = 56.6 bits (135), Expect = 8e-07 Identities = 28/66 (42%), Positives = 40/66 (60%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V R T + R L D V L +++H+IF++ES G+L P+V+F EAVK+L+ K Sbjct: 259 AYVKDARYDTCSRNVYRYPQLNDAVTLSRIRDHYIFSVESVGALKPDVIFLEAVKVLKRK 318 Query: 120 CEAIPD 103 C A D Sbjct: 319 CRAFID 324 [120][TOP] >UniRef100_Q59ZF5 Putative uncharacterized protein RPC40 n=1 Tax=Candida albicans RepID=Q59ZF5_CANAL Length = 369 Score = 56.6 bits (135), Expect = 8e-07 Identities = 26/63 (41%), Positives = 42/63 (66%) Frame = -1 Query: 303 RATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEA 124 +A V RK T+ +E +R + V LG ++HFIFN+ESTG++PP +F ++V++L+ Sbjct: 298 KAYVKDARKDTVSREVLRHPEFDGKVQLGRQRDHFIFNVESTGAMPPAEIFFKSVRLLKN 357 Query: 123 KCE 115 K E Sbjct: 358 KAE 360 [121][TOP] >UniRef100_C5M6J2 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M6J2_CANTT Length = 337 Score = 56.6 bits (135), Expect = 8e-07 Identities = 27/62 (43%), Positives = 42/62 (67%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A VA RK T+ +E +R + V LG ++HFIFN+ESTG++ P+ +F ++V+IL+ K Sbjct: 267 AYVADARKDTVSREVLRHPEFDGKVKLGRQRDHFIFNVESTGAMTPDEIFCKSVRILKNK 326 Query: 120 CE 115 E Sbjct: 327 AE 328 [122][TOP] >UniRef100_C4YIK8 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1 Tax=Candida albicans RepID=C4YIK8_CANAL Length = 336 Score = 56.6 bits (135), Expect = 8e-07 Identities = 26/63 (41%), Positives = 42/63 (66%) Frame = -1 Query: 303 RATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEA 124 +A V RK T+ +E +R + V LG ++HFIFN+ESTG++PP +F ++V++L+ Sbjct: 265 KAYVKDARKDTVSREVLRHPEFDGKVQLGRQRDHFIFNVESTGAMPPAEIFFKSVRLLKN 324 Query: 123 KCE 115 K E Sbjct: 325 KAE 327 [123][TOP] >UniRef100_B9WBJ1 DNA-directed RNA polymerases I and III subunit, putative n=1 Tax=Candida dubliniensis CD36 RepID=B9WBJ1_CANDC Length = 336 Score = 56.6 bits (135), Expect = 8e-07 Identities = 26/63 (41%), Positives = 42/63 (66%) Frame = -1 Query: 303 RATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEA 124 +A V RK T+ +E +R + V LG ++HFIFN+ESTG++PP +F ++V++L+ Sbjct: 265 KAYVKDARKDTVSREVLRHPEFDGKVQLGRQRDHFIFNVESTGAMPPAEIFFKSVRLLKN 324 Query: 123 KCE 115 K E Sbjct: 325 KAE 327 [124][TOP] >UniRef100_Q014V0 RNA polymerase subunit (ISS) n=1 Tax=Ostreococcus tauri RepID=Q014V0_OSTTA Length = 382 Score = 56.2 bits (134), Expect = 1e-06 Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 4/71 (5%) Frame = -1 Query: 309 KKRATVAQPRKCTLCKECVRD----DDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEA 142 KK V + R C LC E VR+ + + + KNHFIF IES G + P +F EA Sbjct: 308 KKTVKVVETRGCDLCVERVRELTGEPGWDEKIAVRKHKNHFIFTIESVGQMKPGTIFKEA 367 Query: 141 VKILEAKCEAI 109 VKIL +KC+ + Sbjct: 368 VKILASKCQNV 378 [125][TOP] >UniRef100_B4JB45 GH11517 n=1 Tax=Drosophila grimshawi RepID=B4JB45_DROGR Length = 333 Score = 56.2 bits (134), Expect = 1e-06 Identities = 28/66 (42%), Positives = 40/66 (60%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V R + + R L D V + V++H+IF++ES G+L PEV+F EAVK+L+ K Sbjct: 263 AYVKDARYDSCSRNVYRYPQLADAVIMARVRDHYIFSVESVGALKPEVIFLEAVKVLKKK 322 Query: 120 CEAIPD 103 C A D Sbjct: 323 CRAFID 328 [126][TOP] >UniRef100_A8P6Y5 RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein n=1 Tax=Brugia malayi RepID=A8P6Y5_BRUMA Length = 339 Score = 56.2 bits (134), Expect = 1e-06 Identities = 25/64 (39%), Positives = 40/64 (62%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V R T + +R +DL ++++L +K+HFIF++ESTG+L L EA K++E K Sbjct: 264 AFVKDARSDTCSRNILRYEDLAEYIELSRIKDHFIFSVESTGALRSAELVVEACKVMEEK 323 Query: 120 CEAI 109 C + Sbjct: 324 CRTL 327 [127][TOP] >UniRef100_A7TDY1 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TDY1_VANPO Length = 335 Score = 56.2 bits (134), Expect = 1e-06 Identities = 28/62 (45%), Positives = 39/62 (62%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V RK T+ +E R + V LG V+NHFI N+ESTG++ PE +F ++V+IL K Sbjct: 264 AYVKDARKDTVSREVFRHPEFEGKVKLGRVRNHFIVNVESTGAMTPEEIFFKSVRILRNK 323 Query: 120 CE 115 E Sbjct: 324 AE 325 [128][TOP] >UniRef100_A4HA24 DNA-directed RNA polymerase, alpha subunit,putative n=1 Tax=Leishmania braziliensis RepID=A4HA24_LEIBR Length = 446 Score = 55.8 bits (133), Expect = 1e-06 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLV--------DHVDLGSVKNHFIFNIESTGSLPPEVLFTE 145 ATV P KCTLC+EC+R DD D V + K H IF+IES G L P + Sbjct: 354 ATVLAPEKCTLCRECLRSDDNAGAAAASEGDRVRVQKDKTHVIFHIESVGQLHPAQILRF 413 Query: 144 AVKILEAKCEAIPD 103 +++ +C A+ + Sbjct: 414 GLRLFAERCRALAE 427 [129][TOP] >UniRef100_B4N0H9 GK24584 n=1 Tax=Drosophila willistoni RepID=B4N0H9_DROWI Length = 332 Score = 55.5 bits (132), Expect = 2e-06 Identities = 28/68 (41%), Positives = 40/68 (58%) Frame = -1 Query: 306 KRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILE 127 + A V R + + R L D V L V++H+IF +ES G+L PEV+F EAVK+L+ Sbjct: 260 ENAYVKDARYDSGSRNVYRYSHLADAVTLARVRDHYIFTVESVGALKPEVIFIEAVKVLK 319 Query: 126 AKCEAIPD 103 KC + D Sbjct: 320 KKCRSFID 327 [130][TOP] >UniRef100_C4XY85 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4XY85_CLAL4 Length = 333 Score = 55.5 bits (132), Expect = 2e-06 Identities = 26/65 (40%), Positives = 42/65 (64%) Frame = -1 Query: 309 KKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKIL 130 K A VA RK T+ +E +R ++ V LG + HFIFN+ESTG++ P +F ++V++L Sbjct: 260 KGEAYVADARKDTVSREVLRHEEFSGKVKLGRDREHFIFNVESTGAMSPAEIFLKSVRVL 319 Query: 129 EAKCE 115 + K + Sbjct: 320 KNKVD 324 [131][TOP] >UniRef100_B2A971 Predicted CDS Pa_1_8610 n=1 Tax=Podospora anserina RepID=B2A971_PODAN Length = 372 Score = 55.5 bits (132), Expect = 2e-06 Identities = 25/69 (36%), Positives = 44/69 (63%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G+ +A V P+ T+ +E +R ++ D V LG ++HFI+ +ESTG + +F E+V Sbjct: 295 EGELKAVVVDPKSDTVSREALRHEEFKDKVKLGRRRDHFIYLVESTGQWKSDAIFLESVS 354 Query: 135 ILEAKCEAI 109 L+AK +A+ Sbjct: 355 HLKAKAKAL 363 [132][TOP] >UniRef100_UPI000180C3EB PREDICTED: similar to RNA polymerase 1-1 n=1 Tax=Ciona intestinalis RepID=UPI000180C3EB Length = 345 Score = 55.1 bits (131), Expect = 2e-06 Identities = 26/68 (38%), Positives = 40/68 (58%) Frame = -1 Query: 312 GKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKI 133 G + A V RK T +E +R L D V+L V++HFI++IES+ ++ P L A+KI Sbjct: 264 GDQEARVVDARKDTCSREVLRHPHLKDRVELSKVRDHFIYSIESSVAITPNELMCRAIKI 323 Query: 132 LEAKCEAI 109 + KC + Sbjct: 324 MMGKCRTL 331 [133][TOP] >UniRef100_A4HY87 DNA-directed RNA polymerase, alpha subunit, putative n=1 Tax=Leishmania infantum RepID=A4HY87_LEIIN Length = 442 Score = 55.1 bits (131), Expect = 2e-06 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 8/74 (10%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDL--------VDHVDLGSVKNHFIFNIESTGSLPPEVLFTE 145 ATV P KCTLC+EC+R DD D V + K H +F+IES G L P + Sbjct: 350 ATVVAPEKCTLCRECLRSDDKGAEAAASEGDRVRVQKEKTHVLFHIESVGQLHPAQILRF 409 Query: 144 AVKILEAKCEAIPD 103 +++ +C A+ + Sbjct: 410 GLRLFAERCRALAE 423 [134][TOP] >UniRef100_C7YHM9 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7YHM9_NECH7 Length = 381 Score = 55.1 bits (131), Expect = 2e-06 Identities = 27/69 (39%), Positives = 43/69 (62%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 +G+ +A V K T+ +E +R ++ V LG ++HFIF+IESTG + LF E+VK Sbjct: 304 EGETKAVVVDAMKDTVSREVLRHEEFEGKVKLGRRRDHFIFSIESTGQWDSDELFLESVK 363 Query: 135 ILEAKCEAI 109 L+ KC+ + Sbjct: 364 HLKLKCKKL 372 [135][TOP] >UniRef100_B3MVL4 GF21532 n=1 Tax=Drosophila ananassae RepID=B3MVL4_DROAN Length = 333 Score = 54.7 bits (130), Expect = 3e-06 Identities = 27/66 (40%), Positives = 39/66 (59%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V R + + R + D V L V++H+IF +ES G+L PEV+F EAVK+L+ K Sbjct: 263 AYVKDARYDSCSRNVYRYPQINDSVTLARVRDHYIFTVESVGALKPEVIFLEAVKVLKKK 322 Query: 120 CEAIPD 103 C + D Sbjct: 323 CRSFID 328 [136][TOP] >UniRef100_Q6C4T2 YALI0E23947p n=1 Tax=Yarrowia lipolytica RepID=Q6C4T2_YARLI Length = 339 Score = 54.7 bits (130), Expect = 3e-06 Identities = 25/65 (38%), Positives = 43/65 (66%) Frame = -1 Query: 303 RATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEA 124 + VA RK T+ +E +R ++ V LG ++HFIFN+ES+G+L P+ +F ++V L+A Sbjct: 265 KPVVADARKDTVSREVLRHEEFNGKVKLGRRRDHFIFNVESSGALEPDEIFLKSVMELQA 324 Query: 123 KCEAI 109 K + + Sbjct: 325 KAQTL 329 [137][TOP] >UniRef100_A5DTC9 DNA-directed RNA polymerases I and III 40 kDa polypeptide n=1 Tax=Lodderomyces elongisporus RepID=A5DTC9_LODEL Length = 336 Score = 54.3 bits (129), Expect = 4e-06 Identities = 25/67 (37%), Positives = 43/67 (64%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 K A V RK T+ +E +R + V LG +++FIFN+ESTG++PP +F ++++ Sbjct: 261 KDDGEAYVEDARKDTVSREVLRHPEFEGKVKLGRQRDYFIFNVESTGAMPPCEIFLKSIR 320 Query: 135 ILEAKCE 115 +L++K E Sbjct: 321 VLKSKAE 327 [138][TOP] >UniRef100_A4R0T4 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea RepID=A4R0T4_MAGGR Length = 373 Score = 54.3 bits (129), Expect = 4e-06 Identities = 25/71 (35%), Positives = 43/71 (60%) Frame = -1 Query: 315 KGKKRATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVK 136 KG+ +A V P + T+ +EC+R + V LG ++HFIF+IES G + LF ++ Sbjct: 296 KGEMKAVVNDPMRDTVSRECLRHAEFEGKVKLGRRRDHFIFSIESAGQWDSDELFLASIA 355 Query: 135 ILEAKCEAIPD 103 L++KC+ + + Sbjct: 356 ELKSKCKKLEE 366 [139][TOP] >UniRef100_UPI0001AE7263 UPI0001AE7263 related cluster n=1 Tax=Homo sapiens RepID=UPI0001AE7263 Length = 242 Score = 53.5 bits (127), Expect = 7e-06 Identities = 24/51 (47%), Positives = 36/51 (70%) Frame = -1 Query: 255 VRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAKCEAIPD 103 +R++ L V L V++H+IF++ESTG LPP+VL +EA+K+L KC D Sbjct: 184 MRNEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLD 234 [140][TOP] >UniRef100_Q5JTE0 Polymerase (RNA) I polypeptide C, 30kDa (Fragment) n=2 Tax=Homo sapiens RepID=Q5JTE0_HUMAN Length = 200 Score = 53.5 bits (127), Expect = 7e-06 Identities = 24/51 (47%), Positives = 36/51 (70%) Frame = -1 Query: 255 VRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAKCEAIPD 103 +R++ L V L V++H+IF++ESTG LPP+VL +EA+K+L KC D Sbjct: 142 MRNEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLD 192 [141][TOP] >UniRef100_A0D420 Chromosome undetermined scaffold_37, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0D420_PARTE Length = 316 Score = 53.5 bits (127), Expect = 7e-06 Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Frame = -1 Query: 294 VAQPRKCTLCKECVRD-DDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAKC 118 V PR CT C+ECVR+ + V+L + NHFIF+IES G + + +A+++ +K Sbjct: 251 VVNPRNCTTCRECVREANGFEKDVELNKIDNHFIFSIESVGQYEAKDIMLQAIEVFRSKV 310 Query: 117 E 115 + Sbjct: 311 Q 311 [142][TOP] >UniRef100_Q4QDF5 DNA-directed RNA polymerase, alpha subunit, putative n=1 Tax=Leishmania major RepID=Q4QDF5_LEIMA Length = 442 Score = 53.1 bits (126), Expect = 9e-06 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 8/74 (10%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDD--------LVDHVDLGSVKNHFIFNIESTGSLPPEVLFTE 145 ATV P KCTLC+EC+R +D D V + K H +F+IES G L P + Sbjct: 350 ATVVAPEKCTLCRECLRSEDKGAEAAANKGDRVRVQKDKTHVLFHIESVGQLHPAQILRF 409 Query: 144 AVKILEAKCEAIPD 103 +++ +C A+ + Sbjct: 410 GLRLFAERCRALAE 423 [143][TOP] >UniRef100_A3GGP5 RNA polymerase III (C) subunit n=1 Tax=Pichia stipitis RepID=A3GGP5_PICST Length = 336 Score = 53.1 bits (126), Expect = 9e-06 Identities = 25/62 (40%), Positives = 41/62 (66%) Frame = -1 Query: 300 ATVAQPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAK 121 A V RK T+ +E +R ++ V LG ++HFIFN+ESTG++ PE +F +++ +L+ K Sbjct: 266 AYVKDARKDTVSREVLRHEEFDGKVKLGRKRDHFIFNVESTGAMAPEEIFFKSLLVLKNK 325 Query: 120 CE 115 E Sbjct: 326 VE 327