AV542183 ( RZ180a08F )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV542183  RZ180a08F
         (580 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_A8MRI1 Uncharacterized protein At1g27650.2 n=1 Tax=Ara...   199   2e-49
UniRef100_Q9S709 Splicing factor U2af small subunit A n=1 Tax=Ar...   199   2e-49
UniRef100_Q9FMY5 Splicing factor U2af small subunit B n=1 Tax=Ar...   102   2e-20
UniRef100_B9H5X4 Predicted protein n=1 Tax=Populus trichocarpa R...    82   4e-14
UniRef100_B9R8U8 U2 snrnp auxiliary factor, small subunit, putat...    77   1e-12
UniRef100_B9GPM3 Predicted protein n=1 Tax=Populus trichocarpa R...    77   1e-12
UniRef100_A7QPI3 Chromosome chr18 scaffold_137, whole genome sho...    77   1e-12
UniRef100_B4FQ72 Putative uncharacterized protein n=1 Tax=Zea ma...    75   5e-12
UniRef100_B6T7D3 Splicing factor U2af 38 kDa subunit n=1 Tax=Zea...    74   8e-12
UniRef100_A9TES1 Predicted protein n=1 Tax=Physcomitrella patens...    69   2e-10
UniRef100_B9SRG2 U2 snrnp auxiliary factor, small subunit, putat...    68   4e-10
UniRef100_C5XG09 Putative uncharacterized protein Sb03g030670 n=...    67   8e-10
UniRef100_Q5QLR4 U2 auxiliary factor small chain-like n=1 Tax=Or...    67   1e-09
UniRef100_B9EYI6 Putative uncharacterized protein n=1 Tax=Oryza ...    67   1e-09
UniRef100_A2WTL5 Putative uncharacterized protein n=1 Tax=Oryza ...    67   1e-09
UniRef100_A2WTL0 Putative uncharacterized protein n=1 Tax=Oryza ...    67   1e-09
UniRef100_Q2QKB5 U2AF small subunit n=1 Tax=Triticum aestivum Re...    66   2e-09
UniRef100_A9RKV0 Predicted protein (Fragment) n=1 Tax=Physcomitr...    65   4e-09
UniRef100_Q6AUG0 Splicing factor U2af small subunit B n=2 Tax=Or...    65   5e-09
UniRef100_Q99L29 cDNA sequence BC003883 n=1 Tax=Mus musculus Rep...    64   6e-09
UniRef100_Q9ZQW8 Splicing factor U2af small subunit A n=3 Tax=Or...    64   1e-08
UniRef100_UPI0001983E2B PREDICTED: hypothetical protein n=1 Tax=...    61   5e-08
UniRef100_C5YVK2 Putative uncharacterized protein Sb09g028530 n=...    60   1e-07
UniRef100_B6T3Q5 Splicing factor U2af 38 kDa subunit n=1 Tax=Zea...    60   1e-07
UniRef100_B6TX31 Putative uncharacterized protein n=1 Tax=Zea ma...    58   5e-07
UniRef100_B6TCE1 Splicing factor U2af 38 kDa subunit n=1 Tax=Zea...    58   5e-07
UniRef100_A9NVR9 Putative uncharacterized protein n=1 Tax=Picea ...    58   6e-07
UniRef100_B6TRJ7 Putative uncharacterized protein n=1 Tax=Zea ma...    57   8e-07
UniRef100_C0PTJ1 Putative uncharacterized protein n=1 Tax=Picea ...    57   1e-06
UniRef100_B6SY08 Splicing factor U2af 38 kDa subunit n=1 Tax=Zea...    57   1e-06
UniRef100_B4FAF4 Putative uncharacterized protein n=1 Tax=Zea ma...    57   1e-06
UniRef100_C0PM88 Putative uncharacterized protein n=1 Tax=Zea ma...    56   2e-06
UniRef100_Q9ZQW8-2 Isoform 2 of Splicing factor U2af small subun...    55   5e-06
UniRef100_B9SN77 U2 snrnp auxiliary factor, small subunit, putat...    54   7e-06
UniRef100_B8LNG3 Putative uncharacterized protein n=1 Tax=Picea ...    54   7e-06
graphical overview:
alignment
UniRef100_A8MRI1 UniRef100_A8MRI1 UniRef100_Q9S709 UniRef100_Q9S709 UniRef100_Q9FMY5 UniRef100_Q9FMY5 UniRef100_B9H5X4 UniRef100_B9H5X4 UniRef100_B9R8U8 UniRef100_B9R8U8 UniRef100_B9GPM3 UniRef100_B9GPM3 UniRef100_A7QPI3 UniRef100_A7QPI3 UniRef100_B4FQ72 UniRef100_B4FQ72 UniRef100_B6T7D3 UniRef100_B6T7D3 UniRef100_A9TES1 UniRef100_A9TES1 UniRef100_B9SRG2 UniRef100_B9SRG2 UniRef100_C5XG09 UniRef100_C5XG09 UniRef100_Q5QLR4 UniRef100_Q5QLR4 UniRef100_B9EYI6 UniRef100_B9EYI6 UniRef100_A2WTL5 UniRef100_A2WTL5 UniRef100_A2WTL0 UniRef100_A2WTL0 UniRef100_Q2QKB5 UniRef100_Q2QKB5 UniRef100_A9RKV0 UniRef100_A9RKV0 UniRef100_Q6AUG0 UniRef100_Q6AUG0 UniRef100_Q99L29 UniRef100_Q99L29 UniRef100_Q9ZQW8 UniRef100_Q9ZQW8 UniRef100_UPI0001983E2B UniRef100_UPI0001983E2B UniRef100_C5YVK2 UniRef100_C5YVK2 UniRef100_B6T3Q5 UniRef100_B6T3Q5 UniRef100_B6TX31 UniRef100_B6TX31 UniRef100_B6TCE1 UniRef100_B6TCE1 UniRef100_A9NVR9 UniRef100_A9NVR9 UniRef100_B6TRJ7 UniRef100_B6TRJ7 UniRef100_C0PTJ1 UniRef100_C0PTJ1 UniRef100_B6SY08 UniRef100_B6SY08 UniRef100_B4FAF4 UniRef100_B4FAF4 UniRef100_C0PM88 UniRef100_C0PM88 UniRef100_Q9ZQW8-2 UniRef100_Q9ZQW8-2 UniRef100_B9SN77 UniRef100_B9SN77