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[1][TOP]
>UniRef100_Q9S7E6 Putative small nuclear ribonucleoprotein Sm D3; 79504-78381 n=1
Tax=Arabidopsis thaliana RepID=Q9S7E6_ARATH
Length = 128
Score = 184 bits (468), Expect = 3e-45
Identities = 89/90 (98%), Positives = 90/90 (100%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG
Sbjct: 39 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 98
Query: 376 VGRGRGSAMRAKGTGRGTGGGRGAVPPVRR 287
VGRGRG+AMRAKGTGRGTGGGRGAVPPVRR
Sbjct: 99 VGRGRGAAMRAKGTGRGTGGGRGAVPPVRR 128
[2][TOP]
>UniRef100_B9GQ12 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GQ12_POPTR
Length = 132
Score = 148 bits (374), Expect = 2e-34
Identities = 77/94 (81%), Positives = 80/94 (85%), Gaps = 4/94 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLE+ITYTAKDGKVSQLEHVFIRGS VRF+VIPDMLKNAPMFK D R KGKSAS
Sbjct: 39 DNWNCQLESITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKSAS 98
Query: 382 LGVGRGRGSAMRAK--GTGRGTGGGRGAVPPVRR 287
LGVGRGR AMR+K TGRG GRG VPPVRR
Sbjct: 99 LGVGRGRSVAMRSKAQATGRGAAPGRGVVPPVRR 132
[3][TOP]
>UniRef100_B9H5H6 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H5H6_POPTR
Length = 132
Score = 145 bits (367), Expect = 2e-33
Identities = 76/94 (80%), Positives = 79/94 (84%), Gaps = 4/94 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLE+ITYTAKDGKVSQLEHVFIRGS VRF+VIPDMLKNAPMFK D R KGKSAS
Sbjct: 39 DNWNCQLESITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKSAS 98
Query: 382 LGVGRGRGSAMRAK--GTGRGTGGGRGAVPPVRR 287
LGVGRGR AMR+K GRG GRG VPPVRR
Sbjct: 99 LGVGRGRSVAMRSKAQAAGRGAPPGRGVVPPVRR 132
[4][TOP]
>UniRef100_UPI000198513C PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI000198513C
Length = 130
Score = 144 bits (364), Expect = 3e-33
Identities = 72/92 (78%), Positives = 78/92 (84%), Gaps = 2/92 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLE+IT+T KDGKVSQLEHVFIRGS VRF+VIPDMLKNAPMFK D R KGK ++
Sbjct: 39 DNWNCQLESITFTGKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSA 98
Query: 382 LGVGRGRGSAMRAKGTGRGTGGGRGAVPPVRR 287
LGVGRGR AMRA+ TGRG GRG VPPVRR
Sbjct: 99 LGVGRGRAVAMRARVTGRGAPPGRGVVPPVRR 130
[5][TOP]
>UniRef100_B9R8N0 Small nuclear ribonucleoprotein, putative n=1 Tax=Ricinus communis
RepID=B9R8N0_RICCO
Length = 131
Score = 144 bits (363), Expect = 4e-33
Identities = 75/93 (80%), Positives = 77/93 (82%), Gaps = 3/93 (3%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLE+ITYTAKDGKVSQLEHVFIRGS VRF+VIPDMLKNAPMFK D R KGKSAS
Sbjct: 39 DNWNCQLESITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKSAS 98
Query: 382 LGVGRGRGSAMRAKGTGRGTGG-GRGAVPPVRR 287
LGVGRGR AMRAK G G GRG PPVRR
Sbjct: 99 LGVGRGRSVAMRAKAQAAGRAGPGRGTAPPVRR 131
[6][TOP]
>UniRef100_Q9LM92 F2D10.7 n=1 Tax=Arabidopsis thaliana RepID=Q9LM92_ARATH
Length = 131
Score = 143 bits (361), Expect = 8e-33
Identities = 78/95 (82%), Positives = 83/95 (87%), Gaps = 5/95 (5%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLE+ITYTAKDGKVSQLEHVFIRGS VRF+VIPD+LK+APMFK D R KGKS+S
Sbjct: 39 DNWNCQLEDITYTAKDGKVSQLEHVFIRGSKVRFMVIPDILKHAPMFKRLDARIKGKSSS 98
Query: 382 LGVGRGRGSAMRAK---GTGRGTGGGRGAVPPVRR 287
LGVGRGRG AMR K G GRGT GGRGAVPPVRR
Sbjct: 99 LGVGRGRG-AMRGKPAAGPGRGT-GGRGAVPPVRR 131
[7][TOP]
>UniRef100_Q8LC48 Small nuclear ribonucleoprotein, putative n=1 Tax=Arabidopsis
thaliana RepID=Q8LC48_ARATH
Length = 131
Score = 141 bits (356), Expect = 3e-32
Identities = 77/95 (81%), Positives = 83/95 (87%), Gaps = 5/95 (5%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLE+ITYTAKDGKVSQLEHVFIRGS VRF+VIPD+LK+APMFK D R KGKS+S
Sbjct: 39 DNWNCQLEDITYTAKDGKVSQLEHVFIRGSKVRFMVIPDILKHAPMFKRLDARIKGKSSS 98
Query: 382 LGVGRGRGSAMRAK---GTGRGTGGGRGAVPPVRR 287
LGVGRGR +AMR K G GRGT GGRGAVPPVRR
Sbjct: 99 LGVGRGR-AAMRGKPAAGPGRGT-GGRGAVPPVRR 131
[8][TOP]
>UniRef100_C6SWW8 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SWW8_SOYBN
Length = 131
Score = 140 bits (352), Expect = 8e-32
Identities = 75/94 (79%), Positives = 77/94 (81%), Gaps = 4/94 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLE+ITYTAKDGK SQLEHVFIRGS VRF+VIPDMLKNAPMFK D R KGK AS
Sbjct: 39 DNWNCQLESITYTAKDGKTSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGAS 98
Query: 382 LGVGRGRGSAMRAK--GTGRGTGGGRGAVPPVRR 287
LGVGRGR AMRAK GRG GRG VPPVRR
Sbjct: 99 LGVGRGRAVAMRAKAQAAGRGAAPGRG-VPPVRR 131
[9][TOP]
>UniRef100_A7QPB5 Chromosome chr18 scaffold_137, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QPB5_VITVI
Length = 132
Score = 139 bits (349), Expect = 2e-31
Identities = 71/94 (75%), Positives = 77/94 (81%), Gaps = 4/94 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLE+IT+T KDGKVSQLEHVFIRGS VRF+VIPDMLKNAPMFK D R KGK ++
Sbjct: 39 DNWNCQLESITFTGKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSA 98
Query: 382 LGVGRGRGSAMRAK--GTGRGTGGGRGAVPPVRR 287
LGVGRGR AMRA+ GRG GRG VPPVRR
Sbjct: 99 LGVGRGRAVAMRARAQAAGRGAPPGRGVVPPVRR 132
[10][TOP]
>UniRef100_UPI0001982F13 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001982F13
Length = 132
Score = 138 bits (348), Expect = 2e-31
Identities = 71/94 (75%), Positives = 76/94 (80%), Gaps = 4/94 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLENIT+TAKDGKVSQLEHVFIRGS VRF+VIPDMLKNAPMFK D R KGK ++
Sbjct: 39 DNWNCQLENITFTAKDGKVSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARVKGKGSA 98
Query: 382 LGVGRGRGSAMRAK--GTGRGTGGGRGAVPPVRR 287
LGVGRGR AMRA+ GRG GRG PP RR
Sbjct: 99 LGVGRGRAVAMRARAQAAGRGAPPGRGVAPPGRR 132
[11][TOP]
>UniRef100_B4FKA5 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FKA5_MAIZE
Length = 132
Score = 135 bits (341), Expect = 2e-30
Identities = 69/94 (73%), Positives = 80/94 (85%), Gaps = 4/94 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLENIT+TAKDGKVSQLEHVFIRGS VRF++IPDMLKNAPMFK + R +GK ++
Sbjct: 39 DNWNCQLENITFTAKDGKVSQLEHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA 98
Query: 382 LGVGRGRGSAMRAK-GTGRGTGG-GRGAVPPVRR 287
+GVGRGR AMRA+ +GRG G GRG+ PPVRR
Sbjct: 99 IGVGRGRAVAMRARAASGRGGGPVGRGSAPPVRR 132
[12][TOP]
>UniRef100_C5WRK4 Putative uncharacterized protein Sb01g041430 n=1 Tax=Sorghum
bicolor RepID=C5WRK4_SORBI
Length = 132
Score = 135 bits (340), Expect = 2e-30
Identities = 69/94 (73%), Positives = 79/94 (84%), Gaps = 4/94 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLENIT+TAKDGKVSQLEHVFIRGS VRF++IPDMLKNAPMFK + R +GK ++
Sbjct: 39 DNWNCQLENITFTAKDGKVSQLEHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA 98
Query: 382 LGVGRGRGSAMRAK-GTGRGTGG-GRGAVPPVRR 287
+GVGRGR AMRA+ GRG G GRG+ PPVRR
Sbjct: 99 IGVGRGRAVAMRARAAAGRGGGPVGRGSAPPVRR 132
[13][TOP]
>UniRef100_B6UG34 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Zea mays
RepID=B6UG34_MAIZE
Length = 132
Score = 135 bits (340), Expect = 2e-30
Identities = 69/94 (73%), Positives = 79/94 (84%), Gaps = 4/94 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLENIT+TAKDGKVSQLEHVFIRGS VRF++IPDMLKNAPMFK + R +GK ++
Sbjct: 39 DNWNCQLENITFTAKDGKVSQLEHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA 98
Query: 382 LGVGRGRGSAMRAK-GTGRGTGG-GRGAVPPVRR 287
+GVGRGR AMRA+ GRG G GRG+ PPVRR
Sbjct: 99 IGVGRGRAVAMRARAAAGRGGGPVGRGSAPPVRR 132
[14][TOP]
>UniRef100_B6UGP6 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Zea mays
RepID=B6UGP6_MAIZE
Length = 132
Score = 134 bits (338), Expect = 4e-30
Identities = 69/94 (73%), Positives = 78/94 (82%), Gaps = 4/94 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLENIT+TAKDGKVSQLEHVFIRGS VRF++IPDMLKNAPMFK + R +GK ++
Sbjct: 39 DNWNCQLENITFTAKDGKVSQLEHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA 98
Query: 382 LGVGRGRGSAMRAK-GTGRGTGG-GRGAVPPVRR 287
+GVGRGR AMRA+ GRG G GRG PPVRR
Sbjct: 99 IGVGRGRAVAMRARAAAGRGGGPVGRGXAPPVRR 132
[15][TOP]
>UniRef100_B4FNH4 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FNH4_MAIZE
Length = 132
Score = 134 bits (338), Expect = 4e-30
Identities = 69/94 (73%), Positives = 78/94 (82%), Gaps = 4/94 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLENIT+TAKDGKVSQLEHVFIRGS VRF++IPDMLKNAPMFK + R +GK ++
Sbjct: 39 DNWNCQLENITFTAKDGKVSQLEHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA 98
Query: 382 LGVGRGRGSAMRAK-GTGRGTGG-GRGAVPPVRR 287
+GVGRGR AMRA+ GRG G GRG PPVRR
Sbjct: 99 VGVGRGRAVAMRARAAAGRGGGPVGRGGAPPVRR 132
[16][TOP]
>UniRef100_Q10PA9 Os03g0240800 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q10PA9_ORYSJ
Length = 132
Score = 134 bits (336), Expect = 6e-30
Identities = 68/94 (72%), Positives = 78/94 (82%), Gaps = 4/94 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQL+NIT+TAKDGKVSQLEHVFIRGS VRF++IPDMLKNAPMFK + R +GK ++
Sbjct: 39 DNWNCQLDNITFTAKDGKVSQLEHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA 98
Query: 382 LGVGRGRGSAMRAK-GTGRGTGG-GRGAVPPVRR 287
+GVGRGR AMRA+ GRG G GRG PPVRR
Sbjct: 99 IGVGRGRAVAMRARAAAGRGGGPVGRGGAPPVRR 132
[17][TOP]
>UniRef100_Q6YU78 Os02g0102700 protein n=2 Tax=Oryza sativa RepID=Q6YU78_ORYSJ
Length = 132
Score = 134 bits (336), Expect = 6e-30
Identities = 68/94 (72%), Positives = 78/94 (82%), Gaps = 4/94 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQL+NIT+TAKDGKVSQLEHVFIRGS VRF++IPDMLKNAPMFK + R +GK ++
Sbjct: 39 DNWNCQLDNITFTAKDGKVSQLEHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA 98
Query: 382 LGVGRGRGSAMRAK-GTGRGTGG-GRGAVPPVRR 287
+GVGRGR AMRA+ GRG G GRG PPVRR
Sbjct: 99 IGVGRGRAVAMRARAAAGRGGGPVGRGGAPPVRR 132
[18][TOP]
>UniRef100_UPI0001983856 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001983856
Length = 133
Score = 130 bits (327), Expect = 7e-29
Identities = 67/93 (72%), Positives = 72/93 (77%), Gaps = 4/93 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLENIT+T KDGKVSQLEHVFIRG VRF+VIPDM KNAPMFK D R KGK ++
Sbjct: 40 DNWNCQLENITFTVKDGKVSQLEHVFIRGIKVRFMVIPDMRKNAPMFKRLDARVKGKGSA 99
Query: 382 LGVGRGRGSAMRAK--GTGRGTGGGRGAVPPVR 290
LGVGRGR AMRA+ GRG GRG PP R
Sbjct: 100 LGVGRGRAVAMRARAQAAGRGAPPGRGVAPPGR 132
[19][TOP]
>UniRef100_A5ALZ4 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5ALZ4_VITVI
Length = 133
Score = 130 bits (327), Expect = 7e-29
Identities = 67/93 (72%), Positives = 72/93 (77%), Gaps = 4/93 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLENIT+T KDGKVSQLEHVFIRG VRF+VIPDM KNAPMFK D R KGK ++
Sbjct: 40 DNWNCQLENITFTVKDGKVSQLEHVFIRGIKVRFMVIPDMRKNAPMFKRLDARVKGKGSA 99
Query: 382 LGVGRGRGSAMRAK--GTGRGTGGGRGAVPPVR 290
LGVGRGR AMRA+ GRG GRG PP R
Sbjct: 100 LGVGRGRAVAMRARAQAAGRGAPPGRGVAPPGR 132
[20][TOP]
>UniRef100_A9NMM7 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NMM7_PICSI
Length = 133
Score = 130 bits (326), Expect = 9e-29
Identities = 67/95 (70%), Positives = 73/95 (76%), Gaps = 5/95 (5%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLE ITYTAKDGKVSQLEHVFIRGS VRF+VIPDML+NAPMF+ D R KGK +S
Sbjct: 39 DNWNCQLEGITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLRNAPMFRRLDARIKGKGSS 98
Query: 382 LGVGRGRGSAMRAKGTGRGTGG---GRGAVPPVRR 287
+GVGRGR AMRA+ G G GR PVRR
Sbjct: 99 IGVGRGRAVAMRARAQATGRAGPPAGRAGPAPVRR 133
[21][TOP]
>UniRef100_A3AFY2 Putative uncharacterized protein n=2 Tax=Oryza sativa
RepID=A3AFY2_ORYSJ
Length = 134
Score = 128 bits (322), Expect = 3e-28
Identities = 65/91 (71%), Positives = 75/91 (82%), Gaps = 4/91 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQL+NIT+TAKDGKVSQLEHVFIRGS VRF++IPDMLKNAPMFK + R +GK ++
Sbjct: 39 DNWNCQLDNITFTAKDGKVSQLEHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA 98
Query: 382 LGVGRGRGSAMRAK-GTGRGTGG-GRGAVPP 296
+GVGRGR AMRA+ GRG G GRG PP
Sbjct: 99 IGVGRGRAVAMRARAAAGRGGGPVGRGGAPP 129
[22][TOP]
>UniRef100_B8LQI0 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LQI0_PICSI
Length = 133
Score = 128 bits (321), Expect = 3e-28
Identities = 68/95 (71%), Positives = 74/95 (77%), Gaps = 5/95 (5%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLE ITYTAKDGKVSQLEHVFIRGS VRF+VIPDML+NAPMF+ D R KG+ +S
Sbjct: 39 DNWNCQLEGITYTAKDGKVSQLEHVFIRGSKVRFMVIPDMLRNAPMFRRLDARIKGRGSS 98
Query: 382 LGVGRGRGSAMRAK--GTGRGT-GGGRGAVPPVRR 287
LGVGRGR AMRA+ TGR GR PVRR
Sbjct: 99 LGVGRGRAVAMRARAQATGRAAPPAGRAGAAPVRR 133
[23][TOP]
>UniRef100_A9RWN4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWN4_PHYPA
Length = 137
Score = 127 bits (318), Expect = 7e-28
Identities = 67/99 (67%), Positives = 76/99 (76%), Gaps = 9/99 (9%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGK-SA 386
DNWN QLE+ITYTAKDGKVSQLEHVFIRGS VR+++IPDMLKNAPMFK D + KGK S+
Sbjct: 39 DNWNSQLESITYTAKDGKVSQLEHVFIRGSKVRYMIIPDMLKNAPMFKRLDAKIKGKGSS 98
Query: 385 SLGVGRGRGSAMRAKGTGRGTG------GGRGAVPPVRR 287
+GVGRGR S M+AK G GGRGA PP+RR
Sbjct: 99 GVGVGRGRASTMQAKARSAARGSVPPPMGGRGAAPPMRR 137
[24][TOP]
>UniRef100_A7PSI3 Chromosome chr6 scaffold_28, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PSI3_VITVI
Length = 199
Score = 125 bits (313), Expect = 3e-27
Identities = 65/89 (73%), Positives = 70/89 (78%), Gaps = 4/89 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLENIT+T KDGKVSQLEHVFIRG VRF+VIPDM KNAPMFK D R KGK ++
Sbjct: 39 DNWNCQLENITFTVKDGKVSQLEHVFIRGIKVRFMVIPDMRKNAPMFKRLDARVKGKGSA 98
Query: 382 LGVGRGRGSAMRAK--GTGRGTGGGRGAV 302
LGVGRGR AMRA+ GRG GRG V
Sbjct: 99 LGVGRGRAVAMRARAQAAGRGAPPGRGNV 127
[25][TOP]
>UniRef100_Q9LMW6 F5M15.9 n=1 Tax=Arabidopsis thaliana RepID=Q9LMW6_ARATH
Length = 207
Score = 122 bits (305), Expect = 2e-26
Identities = 75/123 (60%), Positives = 80/123 (65%), Gaps = 36/123 (29%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLV---------------------------- 461
DNWNCQLE+ITYTAKDGKVSQLEHVFIRGS V
Sbjct: 39 DNWNCQLEDITYTAKDGKVSQLEHVFIRGSKVRCCTCFLVYVIHGIILVNPSCLVIDLRI 98
Query: 460 ---RFLVIPDMLKNAPMFK--DVRGKGKSASLGVGRGRGSAMRAK---GTGRGTGGGRGA 305
RF+VIPD+LK+APMFK D R KGKS+SLGVGRGRG AMR K G GRGT GGRGA
Sbjct: 99 YLDRFMVIPDILKHAPMFKRLDARIKGKSSSLGVGRGRG-AMRGKPAAGPGRGT-GGRGA 156
Query: 304 VPP 296
VPP
Sbjct: 157 VPP 159
[26][TOP]
>UniRef100_B6UDW2 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Zea mays
RepID=B6UDW2_MAIZE
Length = 132
Score = 121 bits (304), Expect = 3e-26
Identities = 62/89 (69%), Positives = 72/89 (80%), Gaps = 2/89 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLENIT+TAKDGKVSQLEHVFIRGS VRF++IPDMLKNAPMFK + R +GK ++
Sbjct: 39 DNWNCQLENITFTAKDGKVSQLEHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA 98
Query: 382 LGVGRGRGSAMRAKGTGRGTGGGRGAVPP 296
+GVGRGR AMRA+ GR + G PP
Sbjct: 99 IGVGRGRAVAMRAR-AGRLSFLDGGRAPP 126
[27][TOP]
>UniRef100_C0PDC0 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0PDC0_MAIZE
Length = 125
Score = 119 bits (298), Expect = 2e-25
Identities = 57/74 (77%), Positives = 66/74 (89%), Gaps = 2/74 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLENIT+TAKDGKVSQLEHVFIRGS VRF++IPDMLKNAPMFK + R +GK ++
Sbjct: 39 DNWNCQLENITFTAKDGKVSQLEHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSA 98
Query: 382 LGVGRGRGSAMRAK 341
+GVGRGR AMRA+
Sbjct: 99 VGVGRGRAVAMRAR 112
[28][TOP]
>UniRef100_A5C078 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5C078_VITVI
Length = 116
Score = 114 bits (284), Expect = 6e-24
Identities = 59/74 (79%), Positives = 64/74 (86%), Gaps = 2/74 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLENIT+TAKDGKVSQLEHVFIRGS V +L IPDMLKNAPMFK D R KGK ++
Sbjct: 39 DNWNCQLENITFTAKDGKVSQLEHVFIRGSKVPWL-IPDMLKNAPMFKRLDARVKGKGSA 97
Query: 382 LGVGRGRGSAMRAK 341
LGVGRGR AMRA+
Sbjct: 98 LGVGRGRAVAMRAR 111
[29][TOP]
>UniRef100_A8STG5 Small nuclear ribonucleoprotein (Fragment) n=1 Tax=Riftia
pachyptila RepID=A8STG5_RIFPA
Length = 104
Score = 103 bits (256), Expect = 1e-20
Identities = 50/86 (58%), Positives = 65/86 (75%), Gaps = 3/86 (3%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ +IT T +DG+ +QLE+VF+RGS +RFL++PDMLKNAPMFK V+GKG G
Sbjct: 9 DNMNCQMSDITCTYRDGRTAQLENVFVRGSKIRFLILPDMLKNAPMFKKVQGKGG----G 64
Query: 376 VGRGRGSAMR---AKGTGRGTGGGRG 308
GRG+ + +R A+G GRG GGRG
Sbjct: 65 AGRGKSAILRAQAARGRGRGGAGGRG 90
[30][TOP]
>UniRef100_Q7ZVB5 Small nuclear ribonucleoprotein D3 polypeptide, like n=1 Tax=Danio
rerio RepID=Q7ZVB5_DANRE
Length = 128
Score = 102 bits (254), Expect = 2e-20
Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 4/94 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+VSQLE V+IRGS +RFL++PDMLKNAPM K ++ K + A G
Sbjct: 37 DNMNCQMSNITVTYRDGRVSQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGA--G 94
Query: 376 VGRGRGSAMR----AKGTGRGTGGGRGAVPPVRR 287
GRG+ + ++ A+G GRG GGRG + RR
Sbjct: 95 AGRGKAAILKAQVAARGRGRGGPGGRGNIFQKRR 128
[31][TOP]
>UniRef100_C1FG12 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FG12_9CHLO
Length = 123
Score = 101 bits (251), Expect = 4e-20
Identities = 51/85 (60%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DNWNCQLE IT+T +DG+V+QLE+V++RGS +RFL+IPDMLKNAPMFK D R G+ A
Sbjct: 43 DNWNCQLEGITHTGRDGRVNQLENVYVRGSKIRFLIIPDMLKNAPMFKRIDPRAGGRGAG 102
Query: 382 LGVGRGRGSAMRAKGTGRGTGGGRG 308
G GRG GRG GGRG
Sbjct: 103 RGGAGGRG--------GRGGRGGRG 119
[32][TOP]
>UniRef100_A8I0E2 Small nuclear ribonucleoprotein n=1 Tax=Chlamydomonas reinhardtii
RepID=A8I0E2_CHLRE
Length = 127
Score = 100 bits (249), Expect = 7e-20
Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 3/86 (3%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DN NCQL+++T T +DG+V+QL H+FIRGS VRF +IPDMLKNAPMFK D + K K+ +
Sbjct: 42 DNMNCQLKDVTATGRDGRVTQLAHLFIRGSRVRFFIIPDMLKNAPMFKRIDPKFKNKNMA 101
Query: 382 LGV-GRGRGSAMRAKGTGRGTGGGRG 308
LGV GRGR +A+RA + G GRG
Sbjct: 102 LGVGGRGRAAAVRAAAKAKTPGRGRG 127
[33][TOP]
>UniRef100_A7RM92 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RM92_NEMVE
Length = 110
Score = 100 bits (249), Expect = 7e-20
Identities = 45/73 (61%), Positives = 58/73 (79%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT TA+DG+VSQLE VF+RGS +RFL++PDMLKNAPMFK + KG S +
Sbjct: 37 DNMNCQMSNITVTARDGRVSQLEQVFVRGSKIRFLILPDMLKNAPMFKKMTQKGSSGTGA 96
Query: 376 VGRGRGSAMRAKG 338
GRG+ + +RA+G
Sbjct: 97 AGRGKSAILRAQG 109
[34][TOP]
>UniRef100_B5XBB1 Small nuclear ribonucleoprotein Sm D3 n=2 Tax=Salmoninae
RepID=B5XBB1_SALSA
Length = 128
Score = 100 bits (248), Expect = 1e-19
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLE V+IRGS +RFL++PDMLKNAPM K + K K+ G
Sbjct: 37 DNMNCQMSNITVTHRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPMLKSM--KNKNQGTG 94
Query: 376 VGRGRGSAMR----AKGTGRGTGGGRGAVPPVRR 287
GRG+ + ++ A+G GRG G GRG + RR
Sbjct: 95 AGRGKAAILKAQVAARGRGRGGGIGRGTIFQKRR 128
[35][TOP]
>UniRef100_B5X939 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Salmo salar
RepID=B5X939_SALSA
Length = 127
Score = 100 bits (248), Expect = 1e-19
Identities = 51/93 (54%), Positives = 68/93 (73%), Gaps = 3/93 (3%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLE V+IRGS +RFL++PDMLKNAPM K ++ K + A G
Sbjct: 37 DNMNCQMANITVTHRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGA--G 94
Query: 376 VGRGRGSAMRAK--GTGRGTGG-GRGAVPPVRR 287
GRG+ + ++A+ GRG GG GRG + P RR
Sbjct: 95 AGRGKAAILKAQVAARGRGRGGMGRGNMFPKRR 127
[36][TOP]
>UniRef100_B5X7Z0 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Salmo salar
RepID=B5X7Z0_SALSA
Length = 128
Score = 100 bits (248), Expect = 1e-19
Identities = 50/94 (53%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLE V+IRGS +RFL++PDMLKNAPM K + K K+ G
Sbjct: 37 DNMNCQMSNITVTHRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPMLKSM--KNKNQGTG 94
Query: 376 VGRGRGSAMR----AKGTGRGTGGGRGAVPPVRR 287
GRG+ + ++ A+G GRG G GRG + RR
Sbjct: 95 AGRGKAAILKAQVAARGRGRGGGIGRGTIFQKRR 128
[37][TOP]
>UniRef100_C1MJN3 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MJN3_9CHLO
Length = 122
Score = 100 bits (248), Expect = 1e-19
Identities = 51/83 (61%), Positives = 58/83 (69%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DNWNCQLE IT T +DG+V+QLEH +IRGS +RFLVIPDMLKNAPMFK + + G
Sbjct: 43 DNWNCQLEGITQTGRDGRVNQLEHAYIRGSKIRFLVIPDMLKNAPMFKRIDPRAGGGGRG 102
Query: 376 VGRGRGSAMRAKGTGRGTGGGRG 308
GRG R G GRG GGRG
Sbjct: 103 ---GRGGGGRG-GGGRGGRGGRG 121
[38][TOP]
>UniRef100_UPI00015B5B9F PREDICTED: similar to MGC52856 protein n=1 Tax=Nasonia vitripennis
RepID=UPI00015B5B9F
Length = 142
Score = 99.4 bits (246), Expect = 2e-19
Identities = 49/86 (56%), Positives = 64/86 (74%), Gaps = 3/86 (3%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ++NIT T +DG+V+QLE+V+IRGS +RFL++PDMLKNAPMFK GKG +
Sbjct: 37 DNMNCQMQNITVTYRDGRVAQLENVYIRGSKIRFLILPDMLKNAPMFKRPGGKGSGTA-- 94
Query: 376 VGRGRGSAMRAKGTGRGTG---GGRG 308
GRG+ + +RA+ GRG G GRG
Sbjct: 95 -GRGKSAILRAQARGRGRGQNQRGRG 119
[39][TOP]
>UniRef100_UPI0001927408 PREDICTED: similar to Small nuclear ribonucleoprotein Sm D3 n=1
Tax=Hydra magnipapillata RepID=UPI0001927408
Length = 130
Score = 98.6 bits (244), Expect = 3e-19
Identities = 50/91 (54%), Positives = 65/91 (71%), Gaps = 5/91 (5%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQL +IT TA+DGKV+QLE +FIRGS +RF+++PDMLKNAPMFK + K+ G
Sbjct: 39 DNMNCQLTHITMTARDGKVAQLEQIFIRGSKIRFVILPDMLKNAPMFKKMLVSQKNT--G 96
Query: 376 VGRGRGSAMRAKGTGRGTG-----GGRGAVP 299
VGRG+ + ++A+ RG G GGRG P
Sbjct: 97 VGRGKSALLKAQVAARGRGSDRGRGGRGFFP 127
[40][TOP]
>UniRef100_C1BJM5 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Osmerus mordax
RepID=C1BJM5_OSMMO
Length = 127
Score = 98.6 bits (244), Expect = 3e-19
Identities = 51/93 (54%), Positives = 68/93 (73%), Gaps = 3/93 (3%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLE V+IRGS +RFL++PDMLKNAPM K ++ K ++A G
Sbjct: 37 DNMNCQMANITVTHRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKNQAA--G 94
Query: 376 VGRGRGSAMRAK--GTGRGTGG-GRGAVPPVRR 287
GRG+ + ++A+ GRG GG GRG V RR
Sbjct: 95 AGRGKAAILKAQVAARGRGRGGMGRGNVFQKRR 127
[41][TOP]
>UniRef100_Q8AVZ5 MGC52856 protein n=1 Tax=Xenopus laevis RepID=Q8AVZ5_XENLA
Length = 126
Score = 98.2 bits (243), Expect = 4e-19
Identities = 48/92 (52%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLE V+IRGS +RFL++PDMLKNAPM K ++ K + + G
Sbjct: 37 DNMNCQMSNITVTYRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGS--G 94
Query: 376 VGRGRGSAMRAK--GTGRGTGGGRGAVPPVRR 287
GRG+ + ++A+ GRG G GRG + RR
Sbjct: 95 AGRGKAAILKAQVAARGRGRGMGRGNIFQKRR 126
[42][TOP]
>UniRef100_P62318 Small nuclear ribonucleoprotein Sm D3 n=7 Tax=Tetrapoda
RepID=SMD3_HUMAN
Length = 126
Score = 98.2 bits (243), Expect = 4e-19
Identities = 48/92 (52%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLE V+IRGS +RFL++PDMLKNAPM K ++ K + + G
Sbjct: 37 DNMNCQMSNITVTYRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGS--G 94
Query: 376 VGRGRGSAMRAK--GTGRGTGGGRGAVPPVRR 287
GRG+ + ++A+ GRG G GRG + RR
Sbjct: 95 AGRGKAAILKAQVAARGRGRGMGRGNIFQKRR 126
[43][TOP]
>UniRef100_C1BY76 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Esox lucius
RepID=C1BY76_ESOLU
Length = 127
Score = 97.8 bits (242), Expect = 5e-19
Identities = 50/93 (53%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLE V+IRGS +RFL++PDMLKNAPM K ++ K + A G
Sbjct: 37 DNMNCQMANITVTHRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGA--G 94
Query: 376 VGRGRGSAMRAK--GTGRGTGG-GRGAVPPVRR 287
GRG+ + ++A+ GRG GG GRG + RR
Sbjct: 95 AGRGKAAILKAQVAARGRGRGGMGRGNIFQKRR 127
[44][TOP]
>UniRef100_B5X738 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Salmo salar
RepID=B5X738_SALSA
Length = 127
Score = 97.8 bits (242), Expect = 5e-19
Identities = 50/93 (53%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLE V+IRGS +RFL++PDMLKNAP K ++ K + A G
Sbjct: 37 DNMNCQMANITVTHRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPTLKSMKNKNQGA--G 94
Query: 376 VGRGRGSAMRAK--GTGRGTGG-GRGAVPPVRR 287
GRG+ + ++A+ GRG GG GRG + P RR
Sbjct: 95 AGRGKAAILKAQVAARGRGRGGMGRGNMFPKRR 127
[45][TOP]
>UniRef100_B0V1I0 Small nuclear ribonucleoprotein D3 polypeptide n=1 Tax=Danio rerio
RepID=B0V1I0_DANRE
Length = 127
Score = 97.8 bits (242), Expect = 5e-19
Identities = 51/93 (54%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLE V+IRGS +RFL++PDMLKNAPM K ++ K +A G
Sbjct: 37 DNMNCQMANITVTYRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKNPAA--G 94
Query: 376 VGRGRGSAMRAK--GTGRGTGG-GRGAVPPVRR 287
GRG+ + ++A+ GRG GG GRG V RR
Sbjct: 95 AGRGKAAILKAQVAARGRGRGGPGRGNVFQKRR 127
[46][TOP]
>UniRef100_B4LNH9 GJ19907 n=1 Tax=Drosophila virilis RepID=B4LNH9_DROVI
Length = 151
Score = 97.4 bits (241), Expect = 6e-19
Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ IT T +DG+ + LE+V+IRGS +RFL++PDMLKNAPMFK GKG + G
Sbjct: 37 DNMNCQMTQITVTYRDGRTANLENVYIRGSKIRFLILPDMLKNAPMFKKQTGKGLGGTAG 96
Query: 376 VGRGRGSAMRAKGTGRGT---GGGRGAVPP 296
G+ +A+G GRGT GGGRG P
Sbjct: 97 RGKAAILRAQARGRGRGTGPAGGGRGGGGP 126
[47][TOP]
>UniRef100_B4J4M9 GH19718 n=2 Tax=Drosophila RepID=B4J4M9_DROGR
Length = 151
Score = 97.4 bits (241), Expect = 6e-19
Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ IT T +DG+ + LE+V+IRGS +RFL++PDMLKNAPMFK GKG + G
Sbjct: 37 DNMNCQMTQITVTYRDGRTANLENVYIRGSKIRFLILPDMLKNAPMFKKQTGKGLGGTAG 96
Query: 376 VGRGRGSAMRAKGTGRGT---GGGRGAVPP 296
G+ +A+G GRGT GGGRG P
Sbjct: 97 RGKAAILRAQARGRGRGTGPPGGGRGGGGP 126
[48][TOP]
>UniRef100_Q6IQ56 Small nuclear ribonucleoprotein D3 polypeptide n=1 Tax=Danio rerio
RepID=Q6IQ56_DANRE
Length = 127
Score = 97.1 bits (240), Expect = 8e-19
Identities = 51/93 (54%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLE V+IRGS +RFL++PDMLKNAPM K ++ K +A G
Sbjct: 37 DNVNCQMANITVTYRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKNPAA--G 94
Query: 376 VGRGRGSAMRAK--GTGRGTGG-GRGAVPPVRR 287
GRG+ + ++A+ GRG GG GRG V RR
Sbjct: 95 AGRGKAAILKAQVAARGRGRGGPGRGNVFQKRR 127
[49][TOP]
>UniRef100_Q4T029 Chromosome undetermined SCAF11373, whole genome shotgun sequence.
(Fragment) n=1 Tax=Tetraodon nigroviridis
RepID=Q4T029_TETNG
Length = 127
Score = 97.1 bits (240), Expect = 8e-19
Identities = 49/93 (52%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLE V+IRGS +RFL++PDMLKNAPM K ++ K + + G
Sbjct: 37 DNMNCQMSNITVTYRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGS--G 94
Query: 376 VGRGRGSAMRAK--GTGRGTGG-GRGAVPPVRR 287
GRG+ + ++A+ GRG GG GRG + RR
Sbjct: 95 AGRGKAAILKAQVAARGRGRGGIGRGNIFQKRR 127
[50][TOP]
>UniRef100_UPI00004C19BB PREDICTED: similar to small nuclear ribonucleoprotein D3 n=1
Tax=Canis lupus familiaris RepID=UPI00004C19BB
Length = 126
Score = 96.7 bits (239), Expect = 1e-18
Identities = 47/92 (51%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLE V+IRGS +RFL++PDMLKN PM K ++ K + + G
Sbjct: 37 DNMNCQMSNITVTYRDGRVAQLEQVYIRGSKIRFLILPDMLKNVPMLKSMKNKNQGS--G 94
Query: 376 VGRGRGSAMRAK--GTGRGTGGGRGAVPPVRR 287
GRG+ + ++A+ GRG G GRG + RR
Sbjct: 95 AGRGKAAILKAQVAARGRGRGMGRGNIFQKRR 126
[51][TOP]
>UniRef100_Q91VM2 Small nuclear ribonucleoprotein D3 n=1 Tax=Mus musculus
RepID=Q91VM2_MOUSE
Length = 126
Score = 96.3 bits (238), Expect = 1e-18
Identities = 47/92 (51%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLE V+IRG +RFL++PDMLKNAPM K ++ K + + G
Sbjct: 37 DNMNCQMSNITVTYRDGRVAQLEQVYIRGRKIRFLILPDMLKNAPMLKSMKNKNQGS--G 94
Query: 376 VGRGRGSAMRAK--GTGRGTGGGRGAVPPVRR 287
GRG+ + ++A+ GRG G GRG + RR
Sbjct: 95 AGRGKAAILKAQVAARGRGRGMGRGNIFQKRR 126
[52][TOP]
>UniRef100_B4NMW9 GK23009 n=1 Tax=Drosophila willistoni RepID=B4NMW9_DROWI
Length = 150
Score = 96.3 bits (238), Expect = 1e-18
Identities = 48/91 (52%), Positives = 62/91 (68%), Gaps = 4/91 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ IT T +DG+ + LE+V+IRGS +RFL++PDMLKNAPMFK GKG +
Sbjct: 37 DNMNCQMTQITVTYRDGRTANLENVYIRGSKIRFLILPDMLKNAPMFKKQTGKGLGGT-- 94
Query: 376 VGRGRGSAMRAKGTGRG----TGGGRGAVPP 296
GRG+ + +RA+ GRG GGGRG P
Sbjct: 95 AGRGKAAILRAQARGRGRGGPPGGGRGGGGP 125
[53][TOP]
>UniRef100_B5E133 GA24604 n=2 Tax=pseudoobscura subgroup RepID=B5E133_DROPS
Length = 150
Score = 96.3 bits (238), Expect = 1e-18
Identities = 48/91 (52%), Positives = 62/91 (68%), Gaps = 4/91 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ IT T +DG+ LE+V+IRGS +RFL++PDMLKNAPMFK GKG +
Sbjct: 37 DNMNCQMTQITVTYRDGRTGNLENVYIRGSKIRFLILPDMLKNAPMFKKQTGKGLGGT-- 94
Query: 376 VGRGRGSAMRAKGTGRG----TGGGRGAVPP 296
GRG+ + +RA+ GRG GGGRG+ P
Sbjct: 95 AGRGKAAILRAQARGRGRGGPPGGGRGSGGP 125
[54][TOP]
>UniRef100_B3MH21 GF12297 n=1 Tax=Drosophila ananassae RepID=B3MH21_DROAN
Length = 151
Score = 96.3 bits (238), Expect = 1e-18
Identities = 48/91 (52%), Positives = 62/91 (68%), Gaps = 4/91 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ IT T +DG+ + LE+V+IRGS +RFL++PDMLKNAPMFK GKG +
Sbjct: 37 DNMNCQMTQITVTYRDGRTASLENVYIRGSKIRFLILPDMLKNAPMFKKQTGKGLGGT-- 94
Query: 376 VGRGRGSAMRAKGTGRG----TGGGRGAVPP 296
GRG+ + +RA+ GRG GGGRG P
Sbjct: 95 AGRGKAAILRAQARGRGRGGPPGGGRGTGGP 125
[55][TOP]
>UniRef100_O44437 Small nuclear ribonucleoprotein Sm D3 n=5 Tax=melanogaster subgroup
RepID=SMD3_DROME
Length = 151
Score = 96.3 bits (238), Expect = 1e-18
Identities = 48/91 (52%), Positives = 62/91 (68%), Gaps = 4/91 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ IT T +DG+ + LE+V+IRGS +RFL++PDMLKNAPMFK GKG +
Sbjct: 37 DNMNCQMTQITVTYRDGRTANLENVYIRGSKIRFLILPDMLKNAPMFKKQTGKGLGGT-- 94
Query: 376 VGRGRGSAMRAKGTGRG----TGGGRGAVPP 296
GRG+ + +RA+ GRG GGGRG P
Sbjct: 95 AGRGKAAILRAQARGRGRGGPPGGGRGTGGP 125
[56][TOP]
>UniRef100_UPI0000DB7292 PREDICTED: similar to small nuclear ribonucleoprotein D3 n=1
Tax=Apis mellifera RepID=UPI0000DB7292
Length = 142
Score = 94.7 bits (234), Expect = 4e-18
Identities = 48/86 (55%), Positives = 61/86 (70%), Gaps = 3/86 (3%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ++NIT T +DG QLE+V+IRGS +RFL++PDMLKNAPMFK GKG +
Sbjct: 37 DNMNCQMQNITVTYRDGHEVQLENVYIRGSKIRFLILPDMLKNAPMFKRPGGKGSGTA-- 94
Query: 376 VGRGRGSAMRAKGTGRGTG---GGRG 308
GRG+ + +RA+ GRG G GRG
Sbjct: 95 -GRGKSAILRAQARGRGRGQNQRGRG 119
[57][TOP]
>UniRef100_C3XQV0 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3XQV0_BRAFL
Length = 120
Score = 94.7 bits (234), Expect = 4e-18
Identities = 50/90 (55%), Positives = 66/90 (73%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLEHVFIRGS +RF+++PDMLKNAPMFK + KG+ A++
Sbjct: 37 DNMNCQMANITVTYRDGRVAQLEHVFIRGSKIRFMILPDMLKNAPMFKS-QQKGQKAAM- 94
Query: 376 VGRGRGSAMRAKGTGRGTGGGRGAVPPVRR 287
G+ + +RA+ RG G GRG V RR
Sbjct: 95 ---GKSAILRAQ-AARGRGRGRGNVFQRRR 120
[58][TOP]
>UniRef100_C9JQC3 Putative uncharacterized protein SNRPD3 n=1 Tax=Homo sapiens
RepID=C9JQC3_HUMAN
Length = 175
Score = 94.7 bits (234), Expect = 4e-18
Identities = 42/78 (53%), Positives = 60/78 (76%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLE V+IRGS +RFL++PDMLKNAPM K ++ K + + G
Sbjct: 37 DNMNCQMSNITVTYRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGS--G 94
Query: 376 VGRGRGSAMRAKGTGRGT 323
GRG+ + ++A+G+G T
Sbjct: 95 AGRGKAAILKAQGSGSAT 112
[59][TOP]
>UniRef100_UPI000186DCC7 Small nuclear ribonucleoprotein SM D3, putative n=1 Tax=Pediculus
humanus corporis RepID=UPI000186DCC7
Length = 136
Score = 94.4 bits (233), Expect = 5e-18
Identities = 49/89 (55%), Positives = 62/89 (69%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ + T +DGKVSQLE+V+IRGS +RFL++PDMLKNAPMFK V + S G
Sbjct: 37 DNMNCQMVTCSVTYRDGKVSQLENVYIRGSKIRFLILPDMLKNAPMFKRV----QKGSGG 92
Query: 376 VGRGRGSAMRAKGTGRGTGGGRGAVPPVR 290
GRG+ + +RA+ RG G G GA P R
Sbjct: 93 AGRGKSAILRAQ-AARGRGRGAGATPSQR 120
[60][TOP]
>UniRef100_Q7Q0C0 AGAP012380-PA n=1 Tax=Anopheles gambiae RepID=Q7Q0C0_ANOGA
Length = 143
Score = 94.0 bits (232), Expect = 7e-18
Identities = 49/89 (55%), Positives = 59/89 (66%), Gaps = 6/89 (6%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK------DVRGKG 395
DN NCQ+ IT T +DG+V LE+V+IRGS +RFL++PDMLKNAPMFK G+G
Sbjct: 37 DNMNCQMTQITVTYRDGRVGNLENVYIRGSKIRFLILPDMLKNAPMFKKQGAKTGTAGRG 96
Query: 394 KSASLGVGRGRGSAMRAKGTGRGTGGGRG 308
KSA L RG R +G G G GGGRG
Sbjct: 97 KSAILRAQAARG---RGRGAGGGGGGGRG 122
[61][TOP]
>UniRef100_A8NMU3 Small nuclear ribonucleoprotein Sm D3, putative n=1 Tax=Brugia
malayi RepID=A8NMU3_BRUMA
Length = 138
Score = 92.8 bits (229), Expect = 2e-17
Identities = 44/96 (45%), Positives = 64/96 (66%), Gaps = 10/96 (10%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ +T T +DG+ L++VFIRGS +RF+++PDMLKNAPMFK++ G+ + ++G
Sbjct: 38 DNMNCQMSEVTVTYRDGRTHHLDNVFIRGSKIRFMILPDMLKNAPMFKNI-GRAQKGAVG 96
Query: 376 VG----------RGRGSAMRAKGTGRGTGGGRGAVP 299
+G RGRG+A R +G RG G G +P
Sbjct: 97 MGMGDNRDGRGLRGRGTAFRGRGGPRGNQRGPGGMP 132
[62][TOP]
>UniRef100_UPI0000D56456 PREDICTED: similar to AGAP012380-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D56456
Length = 137
Score = 92.0 bits (227), Expect = 3e-17
Identities = 48/101 (47%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKD----------- 410
DN NCQ+ IT T +DG+V+QLE+V+IRGS +RFL++PDMLKNAPMFK
Sbjct: 37 DNMNCQMTQITVTYRDGRVAQLENVYIRGSKIRFLILPDMLKNAPMFKKQTKAGTAGRGK 96
Query: 409 --------VRGKGKSASLGVGRGRGSAMRAKGTGRGTGGGR 311
RG+G+ A+ V GRG A +A G G G GR
Sbjct: 97 SAILRAQAARGRGRGANPAVRGGRGGAWQAPGQGAAAGRGR 137
[63][TOP]
>UniRef100_Q2KIS8 Small nuclear ribonucleoprotein D3 polypeptide 18kDa n=1 Tax=Bos
taurus RepID=Q2KIS8_BOVIN
Length = 125
Score = 91.7 bits (226), Expect = 3e-17
Identities = 47/92 (51%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG ++QLE V+IRGS +RFL++PDMLKNAPM K ++ K + + G
Sbjct: 37 DNMNCQMSNITVTYRDG-LAQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGS--G 93
Query: 376 VGRGRGSAMRAK--GTGRGTGGGRGAVPPVRR 287
GRG+ + ++A+ GRG G GRG + RR
Sbjct: 94 AGRGKAAILKAQVAARGRGRGMGRGNIFQKRR 125
[64][TOP]
>UniRef100_Q16Q31 Small nuclear ribonucleoprotein sm d3 n=1 Tax=Aedes aegypti
RepID=Q16Q31_AEDAE
Length = 147
Score = 91.3 bits (225), Expect = 4e-17
Identities = 48/96 (50%), Positives = 61/96 (63%), Gaps = 6/96 (6%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK------DVRGKG 395
DN NCQ+ +T T +DG+ S LE+V+IRGS +RF+++PDMLKNAPMFK G+G
Sbjct: 37 DNMNCQMTQLTVTYRDGRTSNLENVYIRGSKIRFMILPDMLKNAPMFKKQGAKAGTAGRG 96
Query: 394 KSASLGVGRGRGSAMRAKGTGRGTGGGRGAVPPVRR 287
KSA L R A R +G G G GGG G P R+
Sbjct: 97 KSAIL-----RAQAARGRGRGGGGGGGGGGGPGNRQ 127
[65][TOP]
>UniRef100_B7Q5H5 Small nuclear ribonucleoprotein Sm D3, putative n=1 Tax=Ixodes
scapularis RepID=B7Q5H5_IXOSC
Length = 122
Score = 91.3 bits (225), Expect = 4e-17
Identities = 45/82 (54%), Positives = 61/82 (74%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLE+V+IRGS +RFL++PDMLKNAPMFK + K+A+
Sbjct: 37 DNMNCQMANITVTYRDGRVAQLENVYIRGSKIRFLILPDMLKNAPMFK--KAGTKTATAS 94
Query: 376 VGRGRGSAMRAKGTGRGTGGGR 311
GRG+ + +RA+ RG G R
Sbjct: 95 AGRGKSAILRAQ-AARGRGRAR 115
[66][TOP]
>UniRef100_B5X5P3 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Salmo salar
RepID=B5X5P3_SALSA
Length = 119
Score = 90.5 bits (223), Expect = 8e-17
Identities = 41/73 (56%), Positives = 56/73 (76%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLE V+IRGS +RFL++PDMLKNAPM K + K K+ G
Sbjct: 37 DNMNCQMSNITVTHRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPMLKSM--KNKNQGTG 94
Query: 376 VGRGRGSAMRAKG 338
GRG+ + ++A+G
Sbjct: 95 AGRGKAAILKAQG 107
[67][TOP]
>UniRef100_B0WEA6 Small nuclear ribonucleoprotein SM D3 n=1 Tax=Culex
quinquefasciatus RepID=B0WEA6_CULQU
Length = 155
Score = 90.5 bits (223), Expect = 8e-17
Identities = 45/86 (52%), Positives = 60/86 (69%), Gaps = 3/86 (3%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ +T T +DG+ + LE+V+IRGS +RFL++PDMLKNAPMFK K +A
Sbjct: 37 DNMNCQMTQLTVTFRDGRTANLENVYIRGSKIRFLILPDMLKNAPMFKKQGAKSGTA--- 93
Query: 376 VGRGRGSAMR---AKGTGRGTGGGRG 308
GRG+ + +R A+G GRG GGG G
Sbjct: 94 -GRGKSAILRAQAARGRGRGGGGGGG 118
[68][TOP]
>UniRef100_B4DJP7 cDNA FLJ51872, highly similar to Small nuclear ribonucleoprotein Sm
D3 n=2 Tax=Euteleostomi RepID=B4DJP7_HUMAN
Length = 120
Score = 90.5 bits (223), Expect = 8e-17
Identities = 40/73 (54%), Positives = 57/73 (78%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLE V+IRGS +RFL++PDMLKNAPM K ++ K + + G
Sbjct: 37 DNMNCQMSNITVTYRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGS--G 94
Query: 376 VGRGRGSAMRAKG 338
GRG+ + ++A+G
Sbjct: 95 AGRGKAAILKAQG 107
[69][TOP]
>UniRef100_B2B6V4 Predicted CDS Pa_2_9040 n=1 Tax=Podospora anserina
RepID=B2B6V4_PODAN
Length = 118
Score = 90.5 bits (223), Expect = 8e-17
Identities = 46/84 (54%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMF--KDVRGKGKSAS 383
DN N QL++IT TA+DG+VS LE V+IRGS VRF ++PDML+NAPMF ++VRG+G
Sbjct: 39 DNMNVQLKDITVTARDGRVSHLEQVYIRGSHVRFFIVPDMLRNAPMFRSRNVRGRG---- 94
Query: 382 LGVGRGRGSAMRAKGTGRGTGGGR 311
+G+ RGR + RA+ +G GGR
Sbjct: 95 VGLARGRATVSRARASGGPPRGGR 118
[70][TOP]
>UniRef100_B0CS79 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0CS79_LACBS
Length = 127
Score = 90.5 bits (223), Expect = 8e-17
Identities = 49/94 (52%), Positives = 62/94 (65%), Gaps = 5/94 (5%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDV-----RGKGK 392
DN N L++IT T +DG+VSQL+ V+IRGS+VRF ++PDML+NAPMFK V RG+G
Sbjct: 39 DNLNISLKDITVTGRDGRVSQLDQVYIRGSMVRFFIVPDMLQNAPMFKRVGPNAMRGRG- 97
Query: 391 SASLGVGRGRGSAMRAKGTGRGTGGGRGAVPPVR 290
+G RGR + MRA GRG VPP R
Sbjct: 98 ---IGTARGRATIMRANAR-----RGRGVVPPAR 123
[71][TOP]
>UniRef100_Q86L45 LSM domain-containing protein n=1 Tax=Dictyostelium discoideum
RepID=Q86L45_DICDI
Length = 146
Score = 90.1 bits (222), Expect = 1e-16
Identities = 43/85 (50%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKG--KSAS 383
DN NC+++NIT TA+DG+ SQ+E+ ++RGS VRF+++PD+LKNAPMFK + G+ K +
Sbjct: 37 DNMNCRMKNITVTARDGRNSQMEYCYVRGSKVRFIILPDILKNAPMFKRIDGRVVLKGKA 96
Query: 382 LGVGRGRGSAMRAKGTGRGTGGGRG 308
LG+G+G GRG GG RG
Sbjct: 97 LGIGKGATFERGNFRGGRGGGGDRG 121
[72][TOP]
>UniRef100_C4WUG2 ACYPI009639 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WUG2_ACYPI
Length = 139
Score = 90.1 bits (222), Expect = 1e-16
Identities = 47/94 (50%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ ++T T +DG+V+Q+E+V++RGS VRF+++PDML+NAPMFK G +A
Sbjct: 37 DNMNCQVSHVTVTYRDGRVAQMENVYVRGSKVRFIILPDMLRNAPMFKSKMTMGGAA--- 93
Query: 376 VGRGRGSAMRAK-GTGRGTGG---GRGAVPPVRR 287
GRG+ +R+ G GRG GG GRG PP+ R
Sbjct: 94 -GRGKSGMIRSSVGRGRGRGGPPMGRGG-PPMGR 125
[73][TOP]
>UniRef100_B2W6T3 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Pyrenophora
tritici-repentis Pt-1C-BFP RepID=B2W6T3_PYRTR
Length = 118
Score = 90.1 bits (222), Expect = 1e-16
Identities = 45/84 (53%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKD--VRGKGKSAS 383
DN N QL++IT TA+DG+VS LE V+IRGS VR+ ++PDML+NAPMF+ RG+G
Sbjct: 39 DNMNVQLKDITVTARDGRVSHLEQVYIRGSHVRYFIVPDMLRNAPMFRSRGTRGRG---- 94
Query: 382 LGVGRGRGSAMRAKGTGRGTGGGR 311
+G+ RGR + RA+ + RG GGR
Sbjct: 95 VGLARGRATVNRARASTRGGAGGR 118
[74][TOP]
>UniRef100_C1BVQ5 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Lepeophtheirus
salmonis RepID=C1BVQ5_9MAXI
Length = 138
Score = 89.7 bits (221), Expect = 1e-16
Identities = 44/85 (51%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDV-RGKGKSASL 380
DN NCQ+ +++ T +DG VSQLE+++IRGS +RF+++PDMLKNAPMFK++ RG+G SA
Sbjct: 37 DNMNCQMSSVSVTHRDGHVSQLENIYIRGSKIRFMILPDMLKNAPMFKNMGRGRG-SAPA 95
Query: 379 GVGRGRGSAMRAKGT-GRGTGGGRG 308
GRG+ + +R + GRG G G
Sbjct: 96 SAGRGKSAILREQAARGRGRAGPPG 120
[75][TOP]
>UniRef100_Q9C2A8 Probable small nuclear ribonucleoprotein SM D3 n=1 Tax=Neurospora
crassa RepID=Q9C2A8_NEUCR
Length = 116
Score = 89.7 bits (221), Expect = 1e-16
Identities = 45/79 (56%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMF--KDVRGKGKSAS 383
DN N QL++IT TA+DG+VS LE V+IRGS VRF ++PDML+NAPMF ++VRG+G
Sbjct: 39 DNMNVQLKDITVTARDGRVSHLEQVYIRGSHVRFFIVPDMLRNAPMFRSRNVRGRG---- 94
Query: 382 LGVGRGRGSAMRAKGTGRG 326
+G+ RGR + RA+ GRG
Sbjct: 95 VGLARGRATVSRARAGGRG 113
[76][TOP]
>UniRef100_Q2HBC2 Putative uncharacterized protein n=1 Tax=Chaetomium globosum
RepID=Q2HBC2_CHAGB
Length = 115
Score = 89.7 bits (221), Expect = 1e-16
Identities = 45/79 (56%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMF--KDVRGKGKSAS 383
DN N QL++IT TA+DG+VS LE V+IRGS VRF ++PDML+NAPMF ++VRG+G
Sbjct: 39 DNMNVQLKDITVTARDGRVSHLEQVYIRGSHVRFFIVPDMLRNAPMFRSRNVRGRG---- 94
Query: 382 LGVGRGRGSAMRAKGTGRG 326
+G+ RGR + RA+ GRG
Sbjct: 95 VGLARGRATVSRARAGGRG 113
[77][TOP]
>UniRef100_A4R510 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea
RepID=A4R510_MAGGR
Length = 119
Score = 89.4 bits (220), Expect = 2e-16
Identities = 47/85 (55%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMF--KDVRGKGKSAS 383
DN N QL +IT TA+DG+VS L+ V+IRGS VRF ++PDML+NAPMF ++VRG+G
Sbjct: 39 DNMNIQLRDITVTARDGRVSHLDQVYIRGSHVRFFIVPDMLRNAPMFRSRNVRGRG---- 94
Query: 382 LGVGRGRGSAMRAKGTGRGTGGGRG 308
+G+ RGR + RA+G GGGRG
Sbjct: 95 VGLARGRATVNRARG-----GGGRG 114
[78][TOP]
>UniRef100_A6SEY6 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
B05.10 RepID=A6SEY6_BOTFB
Length = 117
Score = 89.0 bits (219), Expect = 2e-16
Identities = 42/81 (51%), Positives = 59/81 (72%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N QL++IT TA+DG+VS L+ V+IRGS VRF ++PDML+NAPMF+ +G+ +G
Sbjct: 39 DNMNVQLKDITVTARDGRVSHLDQVYIRGSHVRFFIVPDMLRNAPMFRSRNTRGR--GVG 96
Query: 376 VGRGRGSAMRAKGTGRGTGGG 314
+ RGR + RA+ +GRG G
Sbjct: 97 LARGRATVSRARASGRGAPRG 117
[79][TOP]
>UniRef100_UPI000023D237 hypothetical protein FG05965.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023D237
Length = 365
Score = 88.6 bits (218), Expect = 3e-16
Identities = 44/79 (55%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMF--KDVRGKGKSAS 383
DN N QL++IT TA+DG+VS L+ V+IRGS VRF ++PDML+NAPMF ++VRG+G
Sbjct: 289 DNMNVQLKDITVTARDGRVSHLDQVYIRGSHVRFFIVPDMLRNAPMFRSRNVRGRG---- 344
Query: 382 LGVGRGRGSAMRAKGTGRG 326
+G+ RGR + RA+ GRG
Sbjct: 345 VGLARGRATVSRARAGGRG 363
[80][TOP]
>UniRef100_C7YUP2 Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI
77-13-4 RepID=C7YUP2_NECH7
Length = 384
Score = 88.6 bits (218), Expect = 3e-16
Identities = 44/79 (55%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMF--KDVRGKGKSAS 383
DN N QL++IT TA+DG+VS L+ V+IRGS VRF ++PDML+NAPMF ++VRG+G
Sbjct: 309 DNMNVQLKDITVTARDGRVSHLDQVYIRGSHVRFFIVPDMLRNAPMFRSRNVRGRG---- 364
Query: 382 LGVGRGRGSAMRAKGTGRG 326
+G+ RGR + RA+ GRG
Sbjct: 365 VGLARGRATVSRARAGGRG 383
[81][TOP]
>UniRef100_UPI000179DC31 hypothetical protein LOC617823 n=1 Tax=Bos taurus
RepID=UPI000179DC31
Length = 85
Score = 88.2 bits (217), Expect = 4e-16
Identities = 44/87 (50%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Frame = -1
Query: 541 QLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLGVGRGR 362
Q+ NIT T +DG+V+QLE V+IRGS +RFL++PDMLKNAPM K ++ K + + G GRG+
Sbjct: 1 QMSNITVTYRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGS--GAGRGK 58
Query: 361 GSAMRAK--GTGRGTGGGRGAVPPVRR 287
+ ++A+ GRG G GRG + RR
Sbjct: 59 AAILKAQVAARGRGRGMGRGNIFQKRR 85
[82][TOP]
>UniRef100_Q0UDD6 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0UDD6_PHANO
Length = 117
Score = 88.2 bits (217), Expect = 4e-16
Identities = 46/85 (54%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKD--VRGKGKSAS 383
DN N QL++IT TA+DG+VS LE V+IRGS VR+ ++PDML+NAPMF+ RG+G
Sbjct: 39 DNMNVQLKDITVTARDGRVSHLEQVYIRGSHVRYFIVPDMLRNAPMFRSRGTRGRG---- 94
Query: 382 LGVGRGRGSAMRAKGTGRGTGGGRG 308
+G+ RGR + RA+ + R GGGRG
Sbjct: 95 VGLARGRATVNRARASTR--GGGRG 117
[83][TOP]
>UniRef100_A9RJD3 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RJD3_PHYPA
Length = 98
Score = 86.7 bits (213), Expect = 1e-15
Identities = 41/55 (74%), Positives = 47/55 (85%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGK 392
DNWN QLE++TYTA DGKVSQLEHV IRGS VRF++IPD+LKNAPMFK + K K
Sbjct: 39 DNWNSQLESVTYTAMDGKVSQLEHVSIRGSKVRFMIIPDILKNAPMFKRLDTKIK 93
[84][TOP]
>UniRef100_A8WN24 C. briggsae CBR-SNR-1 protein n=1 Tax=Caenorhabditis briggsae
RepID=A8WN24_CAEBR
Length = 136
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/100 (47%), Positives = 64/100 (64%), Gaps = 11/100 (11%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQL T +DG+ QLE+VFIRG+ +RF+++PDMLKNAPMFK++ G+ + ++G
Sbjct: 38 DNMNCQLSETIVTFRDGRSHQLENVFIRGNKIRFMILPDMLKNAPMFKNI-GRAQKGAIG 96
Query: 376 V--------GRGRGSAMRAKGTGRGTGGGR---GAVPPVR 290
+ GRGRG+A R + GRG G G PP R
Sbjct: 97 MGLGGLDQRGRGRGTAFR-RPMGRGGPRGMSRPGGAPPFR 135
[85][TOP]
>UniRef100_C1G4Y3 Small nuclear ribonucleoprotein Sm D3 n=3 Tax=Paracoccidioides
brasiliensis RepID=C1G4Y3_PARBD
Length = 116
Score = 85.5 bits (210), Expect = 2e-15
Identities = 41/77 (53%), Positives = 57/77 (74%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N QL++IT TA+DG+VS L+ V+IRGS VRF ++PDML+NAPMF+ +G+ +G
Sbjct: 42 DNMNVQLKDITVTARDGRVSHLDQVYIRGSHVRFFIVPDMLRNAPMFRSRGQRGR--GVG 99
Query: 376 VGRGRGSAMRAKGTGRG 326
+ RGR + RA+G RG
Sbjct: 100 LARGRATVNRARGQRRG 116
[86][TOP]
>UniRef100_C0NY06 Small nuclear ribonucleoprotein Sm D3 n=3 Tax=Ajellomyces
capsulatus RepID=C0NY06_AJECG
Length = 116
Score = 85.5 bits (210), Expect = 2e-15
Identities = 41/77 (53%), Positives = 57/77 (74%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N QL++IT TA+DG+VS L+ V+IRGS VRF ++PDML+NAPMF+ +G+ +G
Sbjct: 42 DNMNVQLKDITVTARDGRVSHLDQVYIRGSHVRFFIVPDMLRNAPMFRSRGQRGR--GVG 99
Query: 376 VGRGRGSAMRAKGTGRG 326
+ RGR + RA+G RG
Sbjct: 100 LARGRATVNRARGQRRG 116
[87][TOP]
>UniRef100_C4JQH1 Small nuclear ribonucleoprotein SM D3 n=3 Tax=Onygenales
RepID=C4JQH1_UNCRE
Length = 116
Score = 85.1 bits (209), Expect = 3e-15
Identities = 42/77 (54%), Positives = 58/77 (75%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N QL++IT TA+DG+VS L+ V+IRGS VRF ++PDML+NAPMF+ RG+ + +G
Sbjct: 42 DNMNVQLKDITVTARDGRVSHLDQVYIRGSHVRFFIVPDMLRNAPMFR-TRGQ-RGRGVG 99
Query: 376 VGRGRGSAMRAKGTGRG 326
+ RGR + RA+G RG
Sbjct: 100 LARGRATVNRARGQRRG 116
[88][TOP]
>UniRef100_Q0D029 Small nuclear ribonucleoprotein Sm D3 n=3 Tax=Aspergillus
RepID=Q0D029_ASPTN
Length = 116
Score = 85.1 bits (209), Expect = 3e-15
Identities = 40/77 (51%), Positives = 57/77 (74%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N QL++IT TA+DG+VS L+ V+IRGS VRF ++PDML+NAPMF+ +G+ +G
Sbjct: 42 DNMNVQLKDITVTARDGRVSHLDQVYIRGSHVRFFIVPDMLRNAPMFRSRGQRGR--GVG 99
Query: 376 VGRGRGSAMRAKGTGRG 326
+ RG+ + RA+G RG
Sbjct: 100 LARGKATVQRARGQRRG 116
[89][TOP]
>UniRef100_A8N5H9 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8N5H9_COPC7
Length = 126
Score = 85.1 bits (209), Expect = 3e-15
Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 5/94 (5%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDV-----RGKGK 392
DN N L++IT T +DG+VSQL+ V+IRGS++RF ++PDML+NAPMFK V RG+G
Sbjct: 40 DNLNISLKDITVTGRDGRVSQLDQVYIRGSMIRFFIVPDMLQNAPMFKRVGPNAMRGRG- 98
Query: 391 SASLGVGRGRGSAMRAKGTGRGTGGGRGAVPPVR 290
+G RGR + MRA+ GRG P R
Sbjct: 99 ---IGTARGRATIMRAR-------RGRGVAPAPR 122
[90][TOP]
>UniRef100_A9V0R2 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V0R2_MONBE
Length = 325
Score = 84.7 bits (208), Expect = 4e-15
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N QL ++T+TA+DG+V+ +E V+IRGS +RF V+PDMLKNAPMFK KG +A
Sbjct: 209 DNMNSQLRDVTFTARDGQVAHVESVYIRGSKIRFFVLPDMLKNAPMFKRASAKGMTA--- 265
Query: 376 VGRGRGSAMRAKGTGR 329
GRG+ + +RA+ G+
Sbjct: 266 -GRGKTAILRAQALGK 280
[91][TOP]
>UniRef100_C8VLD5 Small nuclear ribonucleoprotein SmD3, putative (AFU_orthologue;
AFUA_4G10240) n=2 Tax=Emericella nidulans
RepID=C8VLD5_EMENI
Length = 116
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/77 (53%), Positives = 58/77 (75%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N QL++IT TA+DG+VS L+ V+IRGS VRF ++PDML+NAPMF+ RG+ + +G
Sbjct: 42 DNMNVQLKDITVTARDGRVSHLDQVYIRGSHVRFFIVPDMLRNAPMFR-TRGQ-RGRGVG 99
Query: 376 VGRGRGSAMRAKGTGRG 326
+ RG+ + RA+G RG
Sbjct: 100 LARGKATVQRARGQRRG 116
[92][TOP]
>UniRef100_C5FR86 Small nuclear ribonucleoprotein SM D3 n=1 Tax=Microsporum canis CBS
113480 RepID=C5FR86_NANOT
Length = 116
Score = 84.3 bits (207), Expect = 5e-15
Identities = 40/77 (51%), Positives = 57/77 (74%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N QL++IT TA+DG+VS L+ V+IRGS V+F ++PDML+NAPMF+ +G+ +G
Sbjct: 42 DNMNVQLKDITVTARDGRVSHLDQVYIRGSHVKFFIVPDMLRNAPMFRSRGQRGR--GVG 99
Query: 376 VGRGRGSAMRAKGTGRG 326
+ RGR + RA+G RG
Sbjct: 100 LARGRATVNRARGQRRG 116
[93][TOP]
>UniRef100_B6QI77 Small nuclear ribonucleoprotein SmD3, putative n=2
Tax=Trichocomaceae RepID=B6QI77_PENMQ
Length = 116
Score = 84.0 bits (206), Expect = 7e-15
Identities = 41/77 (53%), Positives = 58/77 (75%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N QL++IT TA+DG+VS L+ V+IRGS VRF ++PDML+NAPMF+ RG+ + +G
Sbjct: 42 DNMNVQLKDITVTARDGRVSHLDQVYIRGSHVRFFIVPDMLRNAPMFR-TRGQ-RGRGVG 99
Query: 376 VGRGRGSAMRAKGTGRG 326
+ RG+ + RA+G RG
Sbjct: 100 LARGKATVNRARGQRRG 116
[94][TOP]
>UniRef100_B6QI76 Small nuclear ribonucleoprotein SmD3, putative n=1 Tax=Penicillium
marneffei ATCC 18224 RepID=B6QI76_PENMQ
Length = 114
Score = 84.0 bits (206), Expect = 7e-15
Identities = 41/77 (53%), Positives = 58/77 (75%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N QL++IT TA+DG+VS L+ V+IRGS VRF ++PDML+NAPMF+ RG+ + +G
Sbjct: 40 DNMNVQLKDITVTARDGRVSHLDQVYIRGSHVRFFIVPDMLRNAPMFR-TRGQ-RGRGVG 97
Query: 376 VGRGRGSAMRAKGTGRG 326
+ RG+ + RA+G RG
Sbjct: 98 LARGKATVNRARGQRRG 114
[95][TOP]
>UniRef100_A2QJD5 Complex: the major small nuclear ribonucleoproteins n=4
Tax=Trichocomaceae RepID=A2QJD5_ASPNC
Length = 116
Score = 84.0 bits (206), Expect = 7e-15
Identities = 39/77 (50%), Positives = 57/77 (74%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N QL++IT TA+DG+VS L+ V+IRGS V+F ++PDML+NAPMF+ +G+ +G
Sbjct: 42 DNMNVQLKDITVTARDGRVSHLDQVYIRGSHVKFFIVPDMLRNAPMFRSRGQRGR--GVG 99
Query: 376 VGRGRGSAMRAKGTGRG 326
+ RG+ + RA+G RG
Sbjct: 100 LARGKATVQRARGQRRG 116
[96][TOP]
>UniRef100_Q17348 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Caenorhabditis
elegans RepID=SMD3_CAEEL
Length = 136
Score = 84.0 bits (206), Expect = 7e-15
Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 8/95 (8%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQL T +DG+ QL++VFIRG+ +RF+++PDMLKNAPMFK++ G+ + ++G
Sbjct: 38 DNMNCQLAETVVTFRDGRSHQLDNVFIRGNKIRFMILPDMLKNAPMFKNI-GRAQKGAIG 96
Query: 376 V--------GRGRGSAMRAKGTGRGTGGGRGAVPP 296
+ GRGRG+A R G GG RG P
Sbjct: 97 MGLGGLDQRGRGRGTAFRRP---MGRGGPRGMSRP 128
[97][TOP]
>UniRef100_B6HRX7 Pc22g12590 protein n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6HRX7_PENCW
Length = 117
Score = 83.2 bits (204), Expect = 1e-14
Identities = 42/78 (53%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N QL++IT TA+DG+VS L+ V+IRGS VRF ++PDML+NAPMF+ RG+ + +G
Sbjct: 42 DNMNVQLKDITVTARDGRVSHLDQVYIRGSHVRFFIVPDMLRNAPMFR-TRGQ-RGRGVG 99
Query: 376 VGRGRGSAMRAKG-TGRG 326
+ RG+ + RA+G GRG
Sbjct: 100 LARGKATVQRARGQRGRG 117
[98][TOP]
>UniRef100_B6KA43 Small nuclear ribonucleoprotein, putative n=3 Tax=Toxoplasma gondii
RepID=B6KA43_TOXGO
Length = 131
Score = 82.4 bits (202), Expect = 2e-14
Identities = 46/93 (49%), Positives = 58/93 (62%), Gaps = 8/93 (8%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSAS 383
DN NC L+ +T T +DG+V LE V+IRGS V+F+V PDML++AP F+ D GK K A
Sbjct: 38 DNMNCLLQTVTVTHRDGRVVSLEQVYIRGSQVKFIVFPDMLRHAPFFRMVDKAGKYKRAL 97
Query: 382 LGVGRGRGSAMRAKGT------GRGTGGGRGAV 302
VG R MRA+G G G GGGRG +
Sbjct: 98 GLVGMRRAMNMRARGARVARARGGGRGGGRGGM 130
[99][TOP]
>UniRef100_C9SNY3 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SNY3_9PEZI
Length = 154
Score = 82.0 bits (201), Expect = 3e-14
Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N QL++IT TA+DG+VS L+ V+IRGS VRF ++PDML+NAPMF+ +G+ L
Sbjct: 39 DNMNIQLKDITVTARDGRVSHLDQVYIRGSHVRFFIVPDMLRNAPMFRSRNQRGRGVGLA 98
Query: 376 VGRGRGSAMRAKGTG-RGTGGGRGAVPPVR 290
GR S+ R T GR PP+R
Sbjct: 99 RGRATPSSQDCWAIARRRTRCGRRENPPLR 128
[100][TOP]
>UniRef100_UPI000180D201 PREDICTED: similar to Small nuclear ribonucleoprotein Sm D3 (Sm-D3)
(snRNP core protein D3) n=1 Tax=Ciona intestinalis
RepID=UPI000180D201
Length = 130
Score = 81.6 bits (200), Expect = 4e-14
Identities = 37/83 (44%), Positives = 58/83 (69%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N Q++++T T +DG+ +QL++++IRGS VRF+++PDMLKNAPM + +G
Sbjct: 37 DNMNSQMQDVTVTYRDGRTAQLQNIYIRGSQVRFMILPDMLKNAPMLRHQKGG------T 90
Query: 376 VGRGRGSAMRAKGTGRGTGGGRG 308
GRG+ + ++A+ GRG G RG
Sbjct: 91 AGRGKAAILKAQVRGRGRGAPRG 113
[101][TOP]
>UniRef100_B6K0A8 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Schizosaccharomyces
japonicus yFS275 RepID=B6K0A8_SCHJY
Length = 98
Score = 81.6 bits (200), Expect = 4e-14
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK---DVRGKGKSA 386
DN NCQL++I+ TA+DG+VS L+ V+IRGS +RFL++PDMLKNAPMFK VRG+G S
Sbjct: 32 DNMNCQLKDISVTARDGRVSHLDQVYIRGSHIRFLIVPDMLKNAPMFKVTPAVRGRGTSL 91
Query: 385 SLGVGR 368
GR
Sbjct: 92 PTRGGR 97
[102][TOP]
>UniRef100_Q16KQ1 Putative uncharacterized protein n=1 Tax=Aedes aegypti
RepID=Q16KQ1_AEDAE
Length = 96
Score = 79.7 bits (195), Expect = 1e-13
Identities = 46/91 (50%), Positives = 57/91 (62%), Gaps = 11/91 (12%)
Frame = -1
Query: 547 NCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGK------GKSA 386
NCQ+ +T T +DG+ S LE+V+IRGS VRF+ +PDMLKNAPMFK K GKSA
Sbjct: 2 NCQMTQLTVTYRDGRTSNLENVYIRGSKVRFMNLPDMLKNAPMFKKQGAKAGTACRGKSA 61
Query: 385 SL---GVGRGRGSAMRAKGT--GRGTGGGRG 308
L G G G G+ + KG G+G GRG
Sbjct: 62 ILRAQGGGGGAGNHQQGKGNWQGQGPSSGRG 92
[103][TOP]
>UniRef100_Q4JHT3 Small nuclear ribonucleoprotein SM-D3, putative n=1 Tax=Schistosoma
mansoni RepID=Q4JHT3_SCHMA
Length = 130
Score = 79.0 bits (193), Expect = 2e-13
Identities = 42/89 (47%), Positives = 59/89 (66%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N + ++ T++DG+ S L+ V+IRGS +RFL++PDMLKN+PM K +G + LG
Sbjct: 37 DNMNVHMCDLIMTSRDGRTSNLQQVYIRGSKIRFLILPDMLKNSPMLKRPQG---AKGLG 93
Query: 376 VGRGRGSAMRAKGTGRGTGGGRGAVPPVR 290
GRG+ + +RA GRGT RG V VR
Sbjct: 94 TGRGKNAMLRAGVRGRGT-FVRGRVATVR 121
[104][TOP]
>UniRef100_A4RTS7 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4RTS7_OSTLU
Length = 95
Score = 78.6 bits (192), Expect = 3e-13
Identities = 33/53 (62%), Positives = 44/53 (83%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGK 398
DNWNCQ+ ++T+ +DGK S++EHV+IRGS VR +VIPDMLK+APMFK + K
Sbjct: 39 DNWNCQMTDVTHVGRDGKESKMEHVYIRGSKVRMMVIPDMLKHAPMFKRIDPK 91
[105][TOP]
>UniRef100_Q5DCE2 SJCHGC04758 protein (Fragment) n=1 Tax=Schistosoma japonicum
RepID=Q5DCE2_SCHJA
Length = 130
Score = 78.6 bits (192), Expect = 3e-13
Identities = 42/89 (47%), Positives = 59/89 (66%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N + ++ T++DG+ S L+ V+IRGS +RFL++PDMLKN+PM K +G + LG
Sbjct: 37 DNMNVHMCDLIMTSRDGRTSNLQQVYIRGSKIRFLILPDMLKNSPMLKRPQG---AKGLG 93
Query: 376 VGRGRGSAMRAKGTGRGTGGGRGAVPPVR 290
GRG+ + +RA GRGT RG V VR
Sbjct: 94 TGRGKNAMLRAGVRGRGT-LVRGRVATVR 121
[106][TOP]
>UniRef100_C5GP07 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ajellomyces
dermatitidis ER-3 RepID=C5GP07_AJEDR
Length = 123
Score = 78.6 bits (192), Expect = 3e-13
Identities = 41/84 (48%), Positives = 57/84 (67%), Gaps = 7/84 (8%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLK-------NAPMFKDVRGK 398
DN N QL++IT TA+DG+VS L+ V+IRGS VRF ++PDML+ NAPMF+ +
Sbjct: 42 DNMNVQLKDITVTARDGRVSHLDQVYIRGSHVRFFIVPDMLRYGINITPNAPMFRSRGQR 101
Query: 397 GKSASLGVGRGRGSAMRAKGTGRG 326
G+ +G+ RGR + RA+G RG
Sbjct: 102 GR--GVGLARGRATVNRARGQRRG 123
[107][TOP]
>UniRef100_A8PVZ5 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS
7966 RepID=A8PVZ5_MALGO
Length = 126
Score = 78.2 bits (191), Expect = 4e-13
Identities = 39/82 (47%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKG-KSASL 380
DN+N +++I TA+DGK + L+ V+IRG+++RF+V+PDML+ APMFK V K +
Sbjct: 38 DNFNISMKDIAVTARDGKQTHLDSVYIRGNMIRFMVVPDMLQQAPMFKRVGPNAMKGRGI 97
Query: 379 GVGRGRGSAMRAKG-TGRGTGG 317
G RGR + MRA+ GRG G
Sbjct: 98 GSARGRATIMRAQARRGRGPSG 119
[108][TOP]
>UniRef100_Q5KLG7 Pre-mRNA splicing factor, putative n=1 Tax=Filobasidiella
neoformans RepID=Q5KLG7_CRYNE
Length = 124
Score = 77.8 bits (190), Expect = 5e-13
Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 8/90 (8%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDV-----RGKGK 392
D N L IT TA+DG+VSQLE V+IRGS++RF+++PD+L APMFK + RG+G
Sbjct: 38 DTLNIALREITVTARDGRVSQLEQVYIRGSMIRFIIVPDLLAQAPMFKRIGPNAMRGRG- 96
Query: 391 SASLGVGRGRGSAMRA---KGTGRGTGGGR 311
+G RGR + RA +GT R G R
Sbjct: 97 ---IGAARGRATIQRANARRGTTRTNQGVR 123
[109][TOP]
>UniRef100_UPI000069DC34 Small nuclear ribonucleoprotein Sm D3 (snRNP core protein D3)
(Sm-D3). n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI000069DC34
Length = 128
Score = 77.4 bits (189), Expect = 7e-13
Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG+V+QLE V+IRGS +RFL++PDMLKNAP+ LG
Sbjct: 37 DNMNCQMSNITVTYRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPILALKEQFSVKMKLG 96
Query: 376 VGRGRGSA----MRAKGTGRGTGGG 314
+ + M A+G GRG G G
Sbjct: 97 EIDYKNAIYKDWMAARGRGRGMGRG 121
[110][TOP]
>UniRef100_Q9UUC6 Probable small nuclear ribonucleoprotein Sm D3 n=1
Tax=Schizosaccharomyces pombe RepID=SMD3_SCHPO
Length = 97
Score = 76.6 bits (187), Expect = 1e-12
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ +I+ TA+DG+VS L+ V+IRGS +RFL++PDML+NAPMFK G G+S L
Sbjct: 35 DNMNCQMRDISVTARDGRVSHLDQVYIRGSHIRFLIVPDMLRNAPMFK--VGPGRSVPLP 92
Query: 376 VGRGR 362
RGR
Sbjct: 93 T-RGR 96
[111][TOP]
>UniRef100_Q5CSL0 Small nucealr riboprotein SMD3, SM domain (Fragment) n=1
Tax=Cryptosporidium parvum Iowa II RepID=Q5CSL0_CRYPV
Length = 143
Score = 76.3 bits (186), Expect = 1e-12
Identities = 38/82 (46%), Positives = 48/82 (58%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NC LE++ T +DGK LE ++RGS +RF ++PDMLKNAPMFK AS+
Sbjct: 59 DNMNCMLEHVNATMRDGKPVSLEQCYLRGSQIRFCILPDMLKNAPMFKLAANAKNRASVL 118
Query: 376 VGRGRGSAMRAKGTGRGTGGGR 311
G A A+ RGT GR
Sbjct: 119 GAAGNKKAFAARFISRGTSRGR 140
[112][TOP]
>UniRef100_Q5CHU4 Aspartyl protease-like n=1 Tax=Cryptosporidium hominis
RepID=Q5CHU4_CRYHO
Length = 128
Score = 76.3 bits (186), Expect = 1e-12
Identities = 38/82 (46%), Positives = 48/82 (58%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NC LE++ T +DGK LE ++RGS +RF ++PDMLKNAPMFK AS+
Sbjct: 37 DNMNCMLEHVNATMRDGKPVSLEQCYLRGSQIRFCILPDMLKNAPMFKLAANAKNRASVL 96
Query: 376 VGRGRGSAMRAKGTGRGTGGGR 311
G A A+ RGT GR
Sbjct: 97 GAAGNKKAFAARFISRGTSRGR 118
[113][TOP]
>UniRef100_Q4P1V4 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4P1V4_USTMA
Length = 850
Score = 74.3 bits (181), Expect = 6e-12
Identities = 34/73 (46%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKG-KSASL 380
DN+N +++IT TA DGK S LE+V+IRG+++RF+++PDML+ APMFK + K +
Sbjct: 38 DNFNIAMKDITVTAPDGKQSHLENVYIRGNMLRFIIVPDMLQQAPMFKRIGPNAMKGRGI 97
Query: 379 GVGRGRGSAMRAK 341
G RGR + +R +
Sbjct: 98 GSARGRATVLRGE 110
[114][TOP]
>UniRef100_C8TDZ5 Small nuclear ribonucleoprotein (Snrnp),putative n=1 Tax=Eimeria
tenella RepID=C8TDZ5_EIMTE
Length = 125
Score = 73.9 bits (180), Expect = 7e-12
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDV-RGKGKSASL 380
DN N ++ +T T KDGKV LE V+IRGS V+ ++ PDML++APMFK RGKG+
Sbjct: 41 DNMNMLIQGVTVTHKDGKVLSLEQVYIRGSQVQMVIFPDMLRHAPMFKLADRGKGRRPLG 100
Query: 379 GVGRGRGSAMR-AKGTGRGTGGGRG 308
VG R MR A+G G G G GRG
Sbjct: 101 LVGMRRAMNMRNARGRG-GRGRGRG 124
[115][TOP]
>UniRef100_B3RYX6 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax
adhaerens RepID=B3RYX6_TRIAD
Length = 101
Score = 73.6 bits (179), Expect = 1e-11
Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGK---GKSA 386
DN NCQ+ ++ T +DG+ + L+ +F+RGS VRF+VIPDMLKNAPMFK K GKSA
Sbjct: 37 DNMNCQMYSVNVTYRDGRTAYLQQIFVRGSKVRFIVIPDMLKNAPMFKKTSNKAELGKSA 96
Query: 385 SL 380
L
Sbjct: 97 IL 98
[116][TOP]
>UniRef100_Q750U6 AGL157Cp n=1 Tax=Eremothecium gossypii RepID=Q750U6_ASHGO
Length = 102
Score = 73.2 bits (178), Expect = 1e-11
Identities = 30/48 (62%), Positives = 41/48 (85%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK 413
DN NCQL ++T TA++G+V+ ++HVF+RGS VRF V+PDM KNAP+FK
Sbjct: 38 DNMNCQLRDVTATARNGQVTHMDHVFVRGSHVRFFVVPDMFKNAPLFK 85
[117][TOP]
>UniRef100_B6AHY5 LSM domain-containing protein n=1 Tax=Cryptosporidium muris RN66
RepID=B6AHY5_9CRYT
Length = 126
Score = 72.8 bits (177), Expect = 2e-11
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK-DVRGKGKSASL 380
DN NC L+ + T KDG+ LE ++RGS +RF ++PDMLKNAPMFK K ++ L
Sbjct: 37 DNMNCMLDTVNVTMKDGRPLALEQCYLRGSQIRFFILPDMLKNAPMFKLAANAKNRARIL 96
Query: 379 GVGRGRGSAMRAKGTGRGTGGGRGAVPPV 293
GV G A + + R G GR + PV
Sbjct: 97 GVA-GNKRAFANRTSVRARGRGRSSRIPV 124
[118][TOP]
>UniRef100_A8PNM2 Small nuclear ribonucleoprotein Sm D3, putative n=1 Tax=Brugia
malayi RepID=A8PNM2_BRUMA
Length = 91
Score = 72.8 bits (177), Expect = 2e-11
Identities = 29/50 (58%), Positives = 41/50 (82%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDV 407
DN NCQ+ +T T +DG+ L++VFIRGS +RF+++PDMLKNAPMFK++
Sbjct: 38 DNMNCQMSEVTVTYRDGRTHHLDNVFIRGSKIRFMILPDMLKNAPMFKNI 87
[119][TOP]
>UniRef100_C5DMT1 KLTH0G11396p n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DMT1_LACTC
Length = 102
Score = 72.0 bits (175), Expect = 3e-11
Identities = 30/48 (62%), Positives = 41/48 (85%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK 413
DN N QL ++T TA+DG V++++HVF+RGS +RF V+PD+LKNAPMFK
Sbjct: 38 DNMNVQLRDVTATARDGSVTRMDHVFVRGSHIRFFVVPDILKNAPMFK 85
[120][TOP]
>UniRef100_A1CHW9 Small nuclear ribonucleoprotein SmD3, putative n=1 Tax=Aspergillus
clavatus RepID=A1CHW9_ASPCL
Length = 136
Score = 72.0 bits (175), Expect = 3e-11
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 20/97 (20%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDML------------------- 434
DN N QL++IT TA+DG+VS L+ V+IRGS V+F ++PDML
Sbjct: 42 DNMNVQLKDITVTARDGRVSHLDQVYIRGSHVKFFIVPDMLRGNIVRGRTSDDGCADFSA 101
Query: 433 -KNAPMFKDVRGKGKSASLGVGRGRGSAMRAKGTGRG 326
+NAPMF+ +G+ +G+ RG+ + RA+G RG
Sbjct: 102 TRNAPMFRSRGQRGR--GVGLARGKATVQRARGQRRG 136
[121][TOP]
>UniRef100_UPI00005082E5 PREDICTED: similar to small nuclear ribonucleoprotein D3 n=1
Tax=Rattus norvegicus RepID=UPI00005082E5
Length = 142
Score = 71.6 bits (174), Expect = 4e-11
Identities = 35/93 (37%), Positives = 55/93 (59%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG V+Q E V+I + +RF ++P+MLKNAP+ ++++ K + + G
Sbjct: 37 DNMNCQMSNITVTYRDGPVAQPEQVYICDTKIRFPILPNMLKNAPVLENLKNKNQGSRAG 96
Query: 376 VGRGRGSAMRAKGTGRGTGGGRGAVPPVRR*FS 278
G+ + GRG G +P + FS
Sbjct: 97 QGKAAILKAQVAARGRGHEMGPWKLPEAKTVFS 129
[122][TOP]
>UniRef100_UPI000050236F UPI000050236F related cluster n=1 Tax=Rattus norvegicus
RepID=UPI000050236F
Length = 126
Score = 71.2 bits (173), Expect = 5e-11
Identities = 33/83 (39%), Positives = 55/83 (66%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NCQ+ NIT T +DG V+Q E V+I + +RF ++P+MLKNAP+ ++++ K + +
Sbjct: 37 DNMNCQMSNITVTYRDGPVAQPEQVYICDTKIRFPILPNMLKNAPVLENLKNKNQGSR-- 94
Query: 376 VGRGRGSAMRAKGTGRGTGGGRG 308
G+G+ + ++A+ RG G G
Sbjct: 95 AGQGKAAILKAQVAARGRGHEMG 117
[123][TOP]
>UniRef100_Q6CGI5 YALI0A19030p n=1 Tax=Yarrowia lipolytica RepID=Q6CGI5_YARLI
Length = 105
Score = 69.7 bits (169), Expect = 1e-10
Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N Q+ ++T TA+ G+VS LE V+IRGS VRF IP+MLKNAPMF+ +S G
Sbjct: 38 DNMNVQIRDVTVTARGGRVSHLEQVYIRGSHVRFFSIPEMLKNAPMFRPQTLAAVRSSRG 97
Query: 376 -VGRGRG 359
GRGRG
Sbjct: 98 RGGRGRG 104
[124][TOP]
>UniRef100_A7ATD6 Small nuclear ribonucleoprotein (SnRNP), putative n=1 Tax=Babesia
bovis RepID=A7ATD6_BABBO
Length = 110
Score = 67.0 bits (162), Expect = 9e-10
Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK-DVRGKGKSA 386
DN NC LE +T KDGK LE VF+RG+ +RF++ PDML++APMFK R + K A
Sbjct: 37 DNMNCLLEGVTMVMKDGKTLALEQVFLRGAQIRFVIFPDMLRHAPMFKQSARDRNKQA 94
[125][TOP]
>UniRef100_A7TEN7 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
DSM 70294 RepID=A7TEN7_VANPO
Length = 100
Score = 67.0 bits (162), Expect = 9e-10
Identities = 27/47 (57%), Positives = 39/47 (82%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMF 416
DN N QL+++T T D KVS+++HVF+RGS ++F V+PD+LKNAP+F
Sbjct: 36 DNMNVQLQDVTVTGVDSKVSRMDHVFVRGSHIKFFVVPDLLKNAPLF 82
[126][TOP]
>UniRef100_C5DYM4 ZYRO0F14212p n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DYM4_ZYGRC
Length = 100
Score = 66.6 bits (161), Expect = 1e-09
Identities = 28/48 (58%), Positives = 39/48 (81%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK 413
DN N QL ++T T D +V++++HVF+RGS VRF V+PDML+NAP+FK
Sbjct: 36 DNMNVQLRDVTVTGVDSQVTRMDHVFVRGSHVRFFVVPDMLENAPLFK 83
[127][TOP]
>UniRef100_UPI00006CA838 Sm protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CA838
Length = 2269
Score = 66.2 bits (160), Expect = 2e-09
Identities = 29/70 (41%), Positives = 47/70 (67%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
D N +L+N+T ++GK SQL+ V++RG+ +RF+VIPD KNAPMFK ++ + K+ +
Sbjct: 37 DTMNVRLDNVTMINRNGKQSQLQSVYLRGAQIRFIVIPDFFKNAPMFKRIKAQSKNKNKS 96
Query: 376 VGRGRGSAMR 347
R + +R
Sbjct: 97 AIREKARKIR 106
[128][TOP]
>UniRef100_C4M3V1 Small nuclear ribonucleoprotein, putative n=1 Tax=Entamoeba
histolytica HM-1:IMSS RepID=C4M3V1_ENTHI
Length = 111
Score = 66.2 bits (160), Expect = 2e-09
Identities = 28/48 (58%), Positives = 38/48 (79%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK 413
DN NCQL ++T TAKDG S+ E++FIRG+ VRF+V+P+M KN+P K
Sbjct: 37 DNMNCQLRDVTITAKDGSQSRTEYIFIRGNQVRFVVLPEMFKNSPCLK 84
[129][TOP]
>UniRef100_B0E8Y9 Small nuclear ribonucleoprotein Sm D3, putative n=1 Tax=Entamoeba
dispar SAW760 RepID=B0E8Y9_ENTDI
Length = 111
Score = 66.2 bits (160), Expect = 2e-09
Identities = 28/48 (58%), Positives = 38/48 (79%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK 413
DN NCQL ++T TAKDG S+ E++FIRG+ VRF+V+P+M KN+P K
Sbjct: 37 DNMNCQLRDVTITAKDGSQSRTEYIFIRGNQVRFVVLPEMFKNSPCLK 84
[130][TOP]
>UniRef100_C5KT85 Small nuclear ribonucleoprotein Sm D3, putative n=1 Tax=Perkinsus
marinus ATCC 50983 RepID=C5KT85_9ALVE
Length = 120
Score = 65.1 bits (157), Expect = 3e-09
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N + + T KDGK + LE +IRGS +R++V+PD L+ APMFK R G
Sbjct: 38 DNMNLLIAEVVVTRKDGKQTSLEQAYIRGSKIRYIVVPDNLRYAPMFKPRR-----QGAG 92
Query: 376 VGRGRGSAMRAK-GTGRGTGGGRG 308
G G +A AK G G+G GG+G
Sbjct: 93 SGWGSLNAPGAKGGKGKGGKGGKG 116
[131][TOP]
>UniRef100_Q6FJP5 Similar to uniprot|P43321 Saccharomyces cerevisiae YLR147c SMD3
spliceosomal snRNA n=1 Tax=Candida glabrata
RepID=Q6FJP5_CANGA
Length = 99
Score = 64.7 bits (156), Expect = 4e-09
Identities = 27/48 (56%), Positives = 38/48 (79%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK 413
DN N QL ++ T+ K+S+++HVF+RGS +RF V+PDMLKNAP+FK
Sbjct: 36 DNMNVQLRDVMVTSSTQKLSRMDHVFVRGSHIRFFVVPDMLKNAPLFK 83
[132][TOP]
>UniRef100_C4QYZ9 Core Sm protein Sm D3 n=1 Tax=Pichia pastoris GS115
RepID=C4QYZ9_PICPG
Length = 100
Score = 64.3 bits (155), Expect = 6e-09
Identities = 27/47 (57%), Positives = 39/47 (82%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMF 416
D+ N QL+++T TA+DGKVS +E +FIRGS +RF +P++LKNAP+F
Sbjct: 37 DSMNIQLKDVTLTAQDGKVSHMEQIFIRGSQIRFFSVPEILKNAPIF 83
[133][TOP]
>UniRef100_C5LM67 Small nuclear ribonucleoprotein Sm D3, putative n=1 Tax=Perkinsus
marinus ATCC 50983 RepID=C5LM67_9ALVE
Length = 119
Score = 63.9 bits (154), Expect = 8e-09
Identities = 35/83 (42%), Positives = 47/83 (56%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN N + + T +DGK + LE +IRGS +R++V+PD L+ APMFK R G
Sbjct: 38 DNMNLLIAEVVVTRRDGKQTSLEQAYIRGSKIRYIVVPDNLRYAPMFKPRR-----QGAG 92
Query: 376 VGRGRGSAMRAKGTGRGTGGGRG 308
G G +A AKG G GG+G
Sbjct: 93 SGWGSLNAPGAKGKGGKGKGGKG 115
[134][TOP]
>UniRef100_Q6CQH0 KLLA0D17160p n=1 Tax=Kluyveromyces lactis RepID=Q6CQH0_KLULA
Length = 100
Score = 63.5 bits (153), Expect = 1e-08
Identities = 25/48 (52%), Positives = 40/48 (83%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK 413
DN NCQL ++ +T +GK+++++ VFIRGS ++ +V+PDMLK+AP+FK
Sbjct: 36 DNMNCQLRDVIFTQANGKMTRMDDVFIRGSNIKLVVVPDMLKHAPLFK 83
[135][TOP]
>UniRef100_UPI0000086245 small nuclear ribonucleoprotein (snRNP) n=1 Tax=Plasmodium
falciparum 3D7 RepID=UPI0000086245
Length = 125
Score = 63.2 bits (152), Expect = 1e-08
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKS 389
DN NC LEN++ KDGK LE V+IRG V F++ PDML+ AP+FK + K K+
Sbjct: 46 DNMNCLLENVSVVKKDGKQILLEQVYIRGGSVSFMIFPDMLRYAPIFKINKSKAKT 101
[136][TOP]
>UniRef100_C0H529 Small nuclear ribonucleoprotein (SnRNP), putative n=1
Tax=Plasmodium falciparum 3D7 RepID=C0H529_PLAF7
Length = 116
Score = 63.2 bits (152), Expect = 1e-08
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKS 389
DN NC LEN++ KDGK LE V+IRG V F++ PDML+ AP+FK + K K+
Sbjct: 37 DNMNCLLENVSVVKKDGKQILLEQVYIRGGSVSFMIFPDMLRYAPIFKINKSKAKT 92
[137][TOP]
>UniRef100_Q4Y7X8 Small nuclear ribonucleoprotein (SnRNP), putative n=1
Tax=Plasmodium chabaudi RepID=Q4Y7X8_PLACH
Length = 129
Score = 62.8 bits (151), Expect = 2e-08
Identities = 31/76 (40%), Positives = 43/76 (56%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
DN NC L N+T +DGK LE V+IRG V F++ PDML+ AP+FK + K K+
Sbjct: 50 DNMNCLLSNVTVVKQDGKQVLLEQVYIRGGSVSFMIFPDMLRYAPIFKINKSKAKTNFAT 109
Query: 376 VGRGRGSAMRAKGTGR 329
+ R + R G+
Sbjct: 110 IRRAMEAHARIASKGK 125
[138][TOP]
>UniRef100_Q4N2J1 Small nuclear ribonucleoprotein, putative n=1 Tax=Theileria parva
RepID=Q4N2J1_THEPA
Length = 118
Score = 62.4 bits (150), Expect = 2e-08
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK 413
DN NC LE + T KDG+ LE V++RG+ ++F++ PDML++APMFK
Sbjct: 37 DNMNCLLEGVVMTMKDGRTIALEQVYLRGAQIQFMIFPDMLRHAPMFK 84
[139][TOP]
>UniRef100_A5K6G7 Small nuclear ribonucleoprotein (SnRNP), putative n=1
Tax=Plasmodium vivax RepID=A5K6G7_PLAVI
Length = 116
Score = 62.4 bits (150), Expect = 2e-08
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKS 389
DN NC LEN++ KDGK LE V+IRG V F++ PDML+ AP+FK + K K+
Sbjct: 37 DNMNCLLENVSVVKKDGKQILLEQVYIRGGSVSFMIFPDMLRYAPIFKVNKAKTKT 92
[140][TOP]
>UniRef100_Q4U9V3 SnRNP protein, putative n=1 Tax=Theileria annulata
RepID=Q4U9V3_THEAN
Length = 118
Score = 62.0 bits (149), Expect = 3e-08
Identities = 26/56 (46%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK-DVRGKGK 392
DN NC +E + T KDG+ LE V++RG+ ++F++ PDML++APMFK + + +GK
Sbjct: 37 DNMNCLMEGVVMTMKDGRTLALEQVYLRGAQIQFMIFPDMLRHAPMFKGNPKDRGK 92
[141][TOP]
>UniRef100_A0CT01 Chromosome undetermined scaffold_266, whole genome shotgun
sequence. (Fragment) n=1 Tax=Paramecium tetraurelia
RepID=A0CT01_PARTE
Length = 363
Score = 61.6 bits (148), Expect = 4e-08
Identities = 28/70 (40%), Positives = 43/70 (61%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
D N +L+ + +DG+ LE V++RGS +RF+VIPD+ K APMFK +R KS ++
Sbjct: 37 DTMNVRLDEVQMVTRDGRPMSLEQVYLRGSQIRFVVIPDVFKYAPMFKKIRANAKSKNMQ 96
Query: 376 VGRGRGSAMR 347
R + +R
Sbjct: 97 QIREKARQVR 106
[142][TOP]
>UniRef100_A0C6K6 Chromosome undetermined scaffold_152, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0C6K6_PARTE
Length = 122
Score = 61.6 bits (148), Expect = 4e-08
Identities = 28/70 (40%), Positives = 43/70 (61%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
D N +L+ + +DG+ LE V++RGS +RF+VIPD+ K APMFK +R KS ++
Sbjct: 37 DTMNVRLDEVQMVTRDGRPMSLEQVYLRGSQIRFVVIPDVFKYAPMFKKIRANAKSKNMQ 96
Query: 376 VGRGRGSAMR 347
R + +R
Sbjct: 97 QIREKARQVR 106
[143][TOP]
>UniRef100_A0C2U8 Chromosome undetermined scaffold_145, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0C2U8_PARTE
Length = 122
Score = 61.6 bits (148), Expect = 4e-08
Identities = 28/70 (40%), Positives = 43/70 (61%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLG 377
D N +L+ + +DG+ LE V++RGS +RF+VIPD+ K APMFK +R KS ++
Sbjct: 37 DTMNVRLDEVQMVTRDGRPMSLEQVYLRGSQIRFVVIPDVFKYAPMFKKIRANAKSKNMQ 96
Query: 376 VGRGRGSAMR 347
R + +R
Sbjct: 97 QIREKARQVR 106
[144][TOP]
>UniRef100_B3L3B0 Small nuclear ribonucleoprotein, putative n=1 Tax=Plasmodium
knowlesi strain H RepID=B3L3B0_PLAKH
Length = 116
Score = 61.2 bits (147), Expect = 5e-08
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKS 389
DN NC LEN++ KDGK LE V+IRG V F++ PDML+ AP+FK + K K+
Sbjct: 37 DNMNCLLENVSVIKKDGKQILLEQVYIRGGSVSFMIFPDMLRYAPIFKVNKTKTKT 92
[145][TOP]
>UniRef100_Q4Z2Q6 Small nuclear ribonucleoprotein (SnRNP), putative n=1
Tax=Plasmodium berghei RepID=Q4Z2Q6_PLABE
Length = 126
Score = 60.8 bits (146), Expect = 6e-08
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKS 389
DN NC L N+T +DGK LE V+IRG V F++ PDML+ AP+FK + K K+
Sbjct: 47 DNMNCLLANVTVVKQDGKQVLLEQVYIRGGSVSFMIFPDMLRYAPIFKVNKSKAKT 102
[146][TOP]
>UniRef100_C5KZA1 Small nuclear ribonucleoprotein Sm D3, putative n=1 Tax=Perkinsus
marinus ATCC 50983 RepID=C5KZA1_9ALVE
Length = 81
Score = 60.8 bits (146), Expect = 6e-08
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = -1
Query: 547 NCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLGVGR 368
N + + T KDGK + LE +IRGS +R++V+PD L+ APMFK R G G
Sbjct: 2 NLLIAEVVVTRKDGKQTSLEQAYIRGSKIRYIVVPDNLRYAPMFKPRR-----QGAGSGW 56
Query: 367 GRGSAMRAK-GTGRGTGGGRG 308
G +A AK G G+G GG+G
Sbjct: 57 GSLNAPGAKGGKGKGGKGGKG 77
[147][TOP]
>UniRef100_B8CAZ8 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8CAZ8_THAPS
Length = 182
Score = 59.3 bits (142), Expect = 2e-07
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDV-----RGKGK 392
D N L + TA++G+VS+L V++RGS VRF+ +PD+L+NAP FK V + + +
Sbjct: 105 DTMNMTLSEVVRTARNGQVSKLPTVYLRGSGVRFIALPDLLRNAPAFKKVASMKAKMEAE 164
Query: 391 SASLGVGRGRGSAMRAK 341
+G G G G A R +
Sbjct: 165 RGVVGGGGGGGGAKRKR 181
[148][TOP]
>UniRef100_C5JW24 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ajellomyces
dermatitidis SLH14081 RepID=C5JW24_AJEDS
Length = 124
Score = 59.3 bits (142), Expect = 2e-07
Identities = 26/42 (61%), Positives = 35/42 (83%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLK 431
DN N QL++IT TA+DG+VS L+ V+IRGS VRF ++PDML+
Sbjct: 42 DNMNVQLKDITVTARDGRVSHLDQVYIRGSHVRFFIVPDMLR 83
[149][TOP]
>UniRef100_Q59NQ6 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Candida albicans
RepID=Q59NQ6_CANAL
Length = 106
Score = 58.9 bits (141), Expect = 2e-07
Identities = 28/48 (58%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -1
Query: 556 DNWNCQLENITYT-AKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMF 416
DN N L T T K GKVS ++ VFIRGS++RF+ +PD+LKNAPMF
Sbjct: 37 DNMNLSLYEATITQGKSGKVSHMDQVFIRGSMIRFISVPDILKNAPMF 84
[150][TOP]
>UniRef100_B9WH25 Small nuclear ribonucleoprotein, putative (Snrnp core protein,
putative) n=1 Tax=Candida dubliniensis CD36
RepID=B9WH25_CANDC
Length = 106
Score = 58.9 bits (141), Expect = 2e-07
Identities = 28/48 (58%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = -1
Query: 556 DNWNCQLENITYT-AKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMF 416
DN N L T T K GKVS ++ VFIRGS++RF+ +PD+LKNAPMF
Sbjct: 37 DNMNLSLYEATITQGKSGKVSHMDQVFIRGSMIRFISVPDILKNAPMF 84
[151][TOP]
>UniRef100_A5E2I2 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Lodderomyces
elongisporus RepID=A5E2I2_LODEL
Length = 106
Score = 57.8 bits (138), Expect = 5e-07
Identities = 26/48 (54%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = -1
Query: 556 DNWNCQLENITYT-AKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMF 416
DN N L ++T T K+G V +E VFIRGS++RF+ +PD+L+NAPMF
Sbjct: 37 DNMNSSLYDVTITNGKNGSVKHMEQVFIRGSMIRFISVPDILRNAPMF 84
[152][TOP]
>UniRef100_Q6Q551 YLR147C n=1 Tax=Saccharomyces cerevisiae RepID=Q6Q551_YEAST
Length = 101
Score = 57.4 bits (137), Expect = 7e-07
Identities = 22/48 (45%), Positives = 36/48 (75%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK 413
D+ N QL ++ T G V+ ++ +F+RGS ++F+V+PD+LKNAP+FK
Sbjct: 38 DSMNVQLRDVIATEPQGAVTHMDQIFVRGSQIKFIVVPDLLKNAPLFK 85
[153][TOP]
>UniRef100_Q6CHU2 YALI0A04961p n=1 Tax=Yarrowia lipolytica RepID=Q6CHU2_YARLI
Length = 138
Score = 57.4 bits (137), Expect = 7e-07
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASL- 380
+N N L+N+ T K+ + L+++ IRG+ +RF ++PD L + D K K +
Sbjct: 34 NNMNTTLKNVKMTMKNRPPTSLDYINIRGNTIRFFILPDSLPLDTLLIDDTPKAKRRKVE 93
Query: 379 -----------GVGRGRGSAMRAKGTGRGTGGGRGAVPP 296
G RGRG MR +G RG GG RG P
Sbjct: 94 PGAPGAARGGPGAARGRGGPMRGRGGPRGRGGPRGRGGP 132
[154][TOP]
>UniRef100_P43321 Small nuclear ribonucleoprotein Sm D3 n=5 Tax=Saccharomyces
cerevisiae RepID=SMD3_YEAST
Length = 101
Score = 57.4 bits (137), Expect = 7e-07
Identities = 22/48 (45%), Positives = 36/48 (75%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFK 413
D+ N QL ++ T G V+ ++ +F+RGS ++F+V+PD+LKNAP+FK
Sbjct: 38 DSMNVQLRDVIATEPQGAVTHMDQIFVRGSQIKFIVVPDLLKNAPLFK 85
[155][TOP]
>UniRef100_UPI0001A2C732 UPI0001A2C732 related cluster n=1 Tax=Danio rerio
RepID=UPI0001A2C732
Length = 93
Score = 55.5 bits (132), Expect = 3e-06
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = -1
Query: 547 NCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKS----ASL 380
N L+ + T K+ + +QLE + IRG+ +R+ ++PD L + D+ K KS A
Sbjct: 11 NTHLKAVKMTLKNREPTQLESLSIRGNNIRYFILPDSLPLDTLLVDIEPKVKSKKREAVA 70
Query: 379 GVGRGRGSAMRAKGTGRGTGGGR 311
G GRGRG R +G GRG GG R
Sbjct: 71 GRGRGRGRG-RGRGRGRGRGGPR 92
[156][TOP]
>UniRef100_UPI00016E41C7 UPI00016E41C7 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E41C7
Length = 119
Score = 55.5 bits (132), Expect = 3e-06
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = -1
Query: 547 NCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKS----ASL 380
N L+ + T K+ + +QLE + IRG+ +R+ ++PD L + D+ K KS A
Sbjct: 37 NTHLKAVKMTPKNREPTQLESLSIRGNNIRYFILPDSLPLDTLLVDIEPKVKSKKREAVA 96
Query: 379 GVGRGRGSAMRAKGTGRGTGGGR 311
G GRGRG R +G GRG GG R
Sbjct: 97 GRGRGRGRG-RGRGRGRGRGGPR 118
[157][TOP]
>UniRef100_Q8JHH1 Small nuclear ribonucleoprotein D1 n=1 Tax=Danio rerio
RepID=Q8JHH1_DANRE
Length = 119
Score = 55.5 bits (132), Expect = 3e-06
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = -1
Query: 547 NCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKS----ASL 380
N L+ + T K+ + +QLE + IRG+ +R+ ++PD L + D+ K KS A
Sbjct: 37 NTHLKAVKMTLKNREPTQLESLSIRGNNIRYFILPDSLPLDTLLVDIEPKVKSKKREAVA 96
Query: 379 GVGRGRGSAMRAKGTGRGTGGGR 311
G GRGRG R +G GRG GG R
Sbjct: 97 GRGRGRGRG-RGRGRGRGRGGPR 118
[158][TOP]
>UniRef100_A4VAK3 Small nuclear ribonucleoprotein D1 (Fragment) n=1 Tax=Danio rerio
RepID=A4VAK3_DANRE
Length = 85
Score = 55.5 bits (132), Expect = 3e-06
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = -1
Query: 547 NCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKS----ASL 380
N L+ + T K+ + +QLE + IRG+ +R+ ++PD L + D+ K KS A
Sbjct: 3 NTHLKAVKMTLKNREPTQLESLSIRGNNIRYFILPDSLPLDTLLVDIEPKVKSKKREAVA 62
Query: 379 GVGRGRGSAMRAKGTGRGTGGGR 311
G GRGRG R +G GRG GG R
Sbjct: 63 GRGRGRGRG-RGRGRGRGRGGPR 84
[159][TOP]
>UniRef100_B7FP32 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7FP32_PHATR
Length = 87
Score = 55.5 bits (132), Expect = 3e-06
Identities = 21/50 (42%), Positives = 39/50 (78%)
Frame = -1
Query: 556 DNWNCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDV 407
D N L ++ TA++GK++++ +V++RGS +RF+ +PD+LK+AP+F+ V
Sbjct: 38 DTMNVSLSDVLRTARNGKITKMPNVYLRGSSIRFIALPDLLKSAPIFQKV 87
[160][TOP]
>UniRef100_UPI000155496A PREDICTED: similar to small nuclear riboprotein Sm-D n=1
Tax=Ornithorhynchus anatinus RepID=UPI000155496A
Length = 147
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Frame = -1
Query: 547 NCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKS----ASL 380
N L+ + T K+ + QLE + IRG+ +R+L++PD L + +V K KS A
Sbjct: 63 NTHLKAVKVTLKNREPEQLETLSIRGNNIRYLILPDGLPLDTLLVEVEPKAKSKKKEAVA 122
Query: 379 GVGRGRGSAMRAKGTGRGTGGGRG 308
G GRGRG R +G GR G GRG
Sbjct: 123 GRGRGRG---RGRGRGRARGRGRG 143
[161][TOP]
>UniRef100_UPI00017B0BA6 UPI00017B0BA6 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0BA6
Length = 104
Score = 55.1 bits (131), Expect = 4e-06
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = -1
Query: 547 NCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKS----ASL 380
N L+ + T K+ + +QLE + IRG+ +R+ ++PD L + D+ K KS A
Sbjct: 22 NTHLKAVKMTLKNREPTQLESLSIRGNNIRYFILPDSLPLDTLLVDIEPKIKSKKREAVA 81
Query: 379 GVGRGRGSAMRAKGTGRGTGGGR 311
G GRGRG R +G GRG GG R
Sbjct: 82 GRGRGRGRG-RGRGRGRGRGGPR 103
[162][TOP]
>UniRef100_C3YFH6 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3YFH6_BRAFL
Length = 121
Score = 55.1 bits (131), Expect = 4e-06
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Frame = -1
Query: 547 NCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKD----VRGKGKSASL 380
N L+ + T K+ + QL+ + IRG+ +R+ ++PD L + D + K + A+
Sbjct: 37 NTHLKAVKMTIKNREPVQLDSLSIRGNNIRYFILPDSLPLDTLLIDDTPKAKAKKREAAS 96
Query: 379 GVGRGRGSAMRAKGTGRGTGGGRG 308
G GRGRG R +G GRG G GRG
Sbjct: 97 GAGRGRG---RGRGRGRGAGRGRG 117
[163][TOP]
>UniRef100_Q7Z5A3 Small nuclear ribonucleoprotein Sm D1 n=1 Tax=Homo sapiens
RepID=Q7Z5A3_HUMAN
Length = 119
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Frame = -1
Query: 547 NCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKS----ASL 380
N L+ + T K+ + QLE + IRG+ +R+ ++PD L + DV K KS A
Sbjct: 37 NTHLKAVKMTLKNREPVQLETLSIRGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVA 96
Query: 379 GVGRGRGSAMRAKGTGRGTGGGR 311
G GRGRG R +G GRG GG R
Sbjct: 97 GRGRGRGRG-RGRGRGRGRGGSR 118
[164][TOP]
>UniRef100_C5M8G1 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Candida tropicalis
MYA-3404 RepID=C5M8G1_CANTT
Length = 106
Score = 55.1 bits (131), Expect = 4e-06
Identities = 26/48 (54%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = -1
Query: 556 DNWNCQLENITYT-AKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMF 416
DN N L T T K G V ++ VFIRGS++RF+ +PD+LKNAPMF
Sbjct: 37 DNMNLSLYEATVTKGKSGSVEHMDQVFIRGSMIRFVSVPDILKNAPMF 84
[165][TOP]
>UniRef100_Q6GLH6 MGC69276 protein n=3 Tax=Xenopus RepID=Q6GLH6_XENTR
Length = 119
Score = 54.7 bits (130), Expect = 5e-06
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Frame = -1
Query: 547 NCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKS----ASL 380
N L+ + T K+ + QLE + IRG+ +R+ ++PD L + DV K KS A
Sbjct: 37 NTHLKAVKMTVKNREPVQLETLSIRGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVA 96
Query: 379 GVGRGRGSAMRAKGTGRGTGGGR 311
G GRGRG R +G GRG GG R
Sbjct: 97 GRGRGRGRG-RGRGRGRGRGGPR 118
[166][TOP]
>UniRef100_A0BYZ4 Chromosome undetermined scaffold_138, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0BYZ4_PARTE
Length = 75
Score = 54.7 bits (130), Expect = 5e-06
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = -1
Query: 514 KDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKSASLGVGRGRGSAMR 347
+DG+ LE V++RGS +RF+VIPD+ K APMFK +R KS ++ R + +R
Sbjct: 4 RDGRPMSLEQVYLRGSQIRFVVIPDVFKYAPMFKKIRANAKSKNMQQIREKARQVR 59
[167][TOP]
>UniRef100_UPI000155ECC8 PREDICTED: similar to mCG14669 n=1 Tax=Equus caballus
RepID=UPI000155ECC8
Length = 116
Score = 54.3 bits (129), Expect = 6e-06
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Frame = -1
Query: 547 NCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKS----ASL 380
N L+ + T K+ + QLE + IRG+ +R+ ++PD L + DV K KS A
Sbjct: 34 NTHLKAVKMTLKNREPVQLETLSIRGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVA 93
Query: 379 GVGRGRGSAMRAKGTGRGTGGGR 311
G GRGRG R +G GRG GG R
Sbjct: 94 GRGRGRGRG-RGRGRGRGRGGPR 115
[168][TOP]
>UniRef100_UPI000155496B PREDICTED: similar to small nuclear ribonucleoprotein Sm D1 n=1
Tax=Ornithorhynchus anatinus RepID=UPI000155496B
Length = 210
Score = 54.3 bits (129), Expect = 6e-06
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Frame = -1
Query: 547 NCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKS----ASL 380
N L+ + T K+ + QLE + IRG+ +R+ ++PD L + DV K KS A
Sbjct: 128 NTHLKAVKMTLKNREPVQLETLSIRGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVA 187
Query: 379 GVGRGRGSAMRAKGTGRGTGGGR 311
G GRGRG R +G GRG GG R
Sbjct: 188 GRGRGRGRG-RGRGRGRGRGGPR 209
[169][TOP]
>UniRef100_UPI0000ECCCF6 Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1)
(Sm-D1) (Sm-D autoantigen). n=2 Tax=Gallus gallus
RepID=UPI0000ECCCF6
Length = 121
Score = 54.3 bits (129), Expect = 6e-06
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Frame = -1
Query: 547 NCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKS----ASL 380
N L+ + T K+ + QLE + IRG+ +R+ ++PD L + DV K KS A
Sbjct: 39 NTHLKAVKMTLKNREPVQLETLSIRGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVA 98
Query: 379 GVGRGRGSAMRAKGTGRGTGGGR 311
G GRGRG R +G GRG GG R
Sbjct: 99 GRGRGRGRG-RGRGRGRGRGGPR 120
[170][TOP]
>UniRef100_UPI0000583F13 PREDICTED: similar to small nuclear ribonucleoprotein sm d1 n=1
Tax=Strongylocentrotus purpuratus RepID=UPI0000583F13
Length = 132
Score = 54.3 bits (129), Expect = 6e-06
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Frame = -1
Query: 547 NCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKD------VRGKGKSA 386
N L+++ T K+ + QLE + IRG+ +R+ ++PD L + D +R K +S+
Sbjct: 37 NTHLKSVKLTPKNRETQQLESLSIRGNNIRYYILPDSLPLDQLLVDDTPKARMRKKQQSS 96
Query: 385 SLGVGRGRGS----AMRAKGTGRGTGGGRG 308
G GRGRG R +G GRG GGG G
Sbjct: 97 MGGRGRGRGGRGGRGGRGRGRGRGGGGGGG 126
[171][TOP]
>UniRef100_P62314 Small nuclear ribonucleoprotein Sm D1 n=7 Tax=Amniota
RepID=SMD1_HUMAN
Length = 119
Score = 54.3 bits (129), Expect = 6e-06
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Frame = -1
Query: 547 NCQLENITYTAKDGKVSQLEHVFIRGSLVRFLVIPDMLKNAPMFKDVRGKGKS----ASL 380
N L+ + T K+ + QLE + IRG+ +R+ ++PD L + DV K KS A
Sbjct: 37 NTHLKAVKMTLKNREPVQLETLSIRGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVA 96
Query: 379 GVGRGRGSAMRAKGTGRGTGGGR 311
G GRGRG R +G GRG GG R
Sbjct: 97 GRGRGRGRG-RGRGRGRGRGGPR 118