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[1][TOP]
>UniRef100_UPI00005DC295 NRPC2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside
binding n=1 Tax=Arabidopsis thaliana RepID=UPI00005DC295
Length = 1161
Score = 283 bits (725), Expect = 6e-75
Identities = 137/137 (100%), Positives = 137/137 (100%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA
Sbjct: 1025 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 1084
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF
Sbjct: 1085 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 1144
Query: 236 QELQSMNVVPRLKLTEA 186
QELQSMNVVPRLKLTEA
Sbjct: 1145 QELQSMNVVPRLKLTEA 1161
[2][TOP]
>UniRef100_UPI0001985A70 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001985A70
Length = 1142
Score = 265 bits (676), Expect = 3e-69
Identities = 123/137 (89%), Positives = 134/137 (97%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIFMGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPTEG+++NGGLRVGEMERDCLIAYGA
Sbjct: 1006 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGA 1065
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI+ERLM+SSDPFEVQVCR CGLLGYYN+KLK +C+TCKNGDNI+TMKLPYACKLLF
Sbjct: 1066 SMLIFERLMVSSDPFEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLF 1125
Query: 236 QELQSMNVVPRLKLTEA 186
QELQ+MNVVPRLKLTEA
Sbjct: 1126 QELQAMNVVPRLKLTEA 1142
[3][TOP]
>UniRef100_A7QMF0 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7QMF0_VITVI
Length = 1146
Score = 265 bits (676), Expect = 3e-69
Identities = 123/137 (89%), Positives = 134/137 (97%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIFMGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPTEG+++NGGLRVGEMERDCLIAYGA
Sbjct: 1010 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGA 1069
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI+ERLM+SSDPFEVQVCR CGLLGYYN+KLK +C+TCKNGDNI+TMKLPYACKLLF
Sbjct: 1070 SMLIFERLMVSSDPFEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLF 1129
Query: 236 QELQSMNVVPRLKLTEA 186
QELQ+MNVVPRLKLTEA
Sbjct: 1130 QELQAMNVVPRLKLTEA 1146
[4][TOP]
>UniRef100_B9SHS2 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SHS2_RICCO
Length = 1139
Score = 257 bits (657), Expect = 4e-67
Identities = 119/137 (86%), Positives = 131/137 (95%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIFMGPIYYQKLKHMVLDKMHARG+GPRVM+TRQPTEG+++NGGLRVGEMERDCLIAYGA
Sbjct: 1003 YIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGA 1062
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI+ERLMISSDPFEVQVCR CGLLGY+N KL+ +C+TCKNGDNI+TMKLPYACKLL
Sbjct: 1063 SMLIFERLMISSDPFEVQVCRVCGLLGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLI 1122
Query: 236 QELQSMNVVPRLKLTEA 186
QELQSMN+VPRLKL EA
Sbjct: 1123 QELQSMNIVPRLKLAEA 1139
[5][TOP]
>UniRef100_Q9FKF1 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana
RepID=Q9FKF1_ARATH
Length = 1194
Score = 256 bits (653), Expect = 1e-66
Identities = 124/135 (91%), Positives = 131/135 (97%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA
Sbjct: 1035 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 1094
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF
Sbjct: 1095 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 1154
Query: 236 QELQSMNVVPRLKLT 192
Q ++++ + +LKL+
Sbjct: 1155 Q-VKTIGLFFKLKLS 1168
[6][TOP]
>UniRef100_B9IDF9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9IDF9_POPTR
Length = 1141
Score = 254 bits (648), Expect = 5e-66
Identities = 116/137 (84%), Positives = 129/137 (94%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIFMGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPT+G+++NGGLRVGEME+DCL+AYG
Sbjct: 1005 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTDGRARNGGLRVGEMEKDCLVAYGT 1064
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+YERLM+SSD FE QVCRACGLLGYYN KLK A+CTTCKNGD ++TMKLPYACKLL
Sbjct: 1065 SMLLYERLMVSSDQFEAQVCRACGLLGYYNQKLKAAMCTTCKNGDKVSTMKLPYACKLLI 1124
Query: 236 QELQSMNVVPRLKLTEA 186
QELQSMN+VPRLKL EA
Sbjct: 1125 QELQSMNIVPRLKLAEA 1141
[7][TOP]
>UniRef100_Q84R88 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q84R88_ORYSJ
Length = 1174
Score = 245 bits (626), Expect = 2e-63
Identities = 111/136 (81%), Positives = 130/136 (95%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+FMGPIYYQKLKHMVLDKMHAR SGPRV++TRQPTEG+S++GGLR+GEMERDCLIAYGA
Sbjct: 1038 YVFMGPIYYQKLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGA 1097
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI+ERL+ISSDP++VQVCR CGLLGYYN+KLK + C+ CKNG+N+A M++PYACKLLF
Sbjct: 1098 SMLIFERLLISSDPYQVQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLF 1157
Query: 236 QELQSMNVVPRLKLTE 189
QELQ+MNVVPRLKLTE
Sbjct: 1158 QELQAMNVVPRLKLTE 1173
[8][TOP]
>UniRef100_Q10JZ3 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q10JZ3_ORYSJ
Length = 1155
Score = 245 bits (626), Expect = 2e-63
Identities = 111/136 (81%), Positives = 130/136 (95%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+FMGPIYYQKLKHMVLDKMHAR SGPRV++TRQPTEG+S++GGLR+GEMERDCLIAYGA
Sbjct: 1019 YVFMGPIYYQKLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGA 1078
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI+ERL+ISSDP++VQVCR CGLLGYYN+KLK + C+ CKNG+N+A M++PYACKLLF
Sbjct: 1079 SMLIFERLLISSDPYQVQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLF 1138
Query: 236 QELQSMNVVPRLKLTE 189
QELQ+MNVVPRLKLTE
Sbjct: 1139 QELQAMNVVPRLKLTE 1154
[9][TOP]
>UniRef100_B9F8X6 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9F8X6_ORYSJ
Length = 1115
Score = 245 bits (626), Expect = 2e-63
Identities = 111/136 (81%), Positives = 130/136 (95%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+FMGPIYYQKLKHMVLDKMHAR SGPRV++TRQPTEG+S++GGLR+GEMERDCLIAYGA
Sbjct: 979 YVFMGPIYYQKLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGA 1038
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI+ERL+ISSDP++VQVCR CGLLGYYN+KLK + C+ CKNG+N+A M++PYACKLLF
Sbjct: 1039 SMLIFERLLISSDPYQVQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLF 1098
Query: 236 QELQSMNVVPRLKLTE 189
QELQ+MNVVPRLKLTE
Sbjct: 1099 QELQAMNVVPRLKLTE 1114
[10][TOP]
>UniRef100_B8AR02 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
RepID=B8AR02_ORYSI
Length = 1117
Score = 245 bits (626), Expect = 2e-63
Identities = 111/136 (81%), Positives = 130/136 (95%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+FMGPIYYQKLKHMVLDKMHAR SGPRV++TRQPTEG+S++GGLR+GEMERDCLIAYGA
Sbjct: 981 YVFMGPIYYQKLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGA 1040
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI+ERL+ISSDP++VQVCR CGLLGYYN+KLK + C+ CKNG+N+A M++PYACKLLF
Sbjct: 1041 SMLIFERLLISSDPYQVQVCRKCGLLGYYNHKLKASYCSMCKNGENMAKMRMPYACKLLF 1100
Query: 236 QELQSMNVVPRLKLTE 189
QELQ+MNVVPRLKLTE
Sbjct: 1101 QELQAMNVVPRLKLTE 1116
[11][TOP]
>UniRef100_C5Z6F6 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Z6F6_SORBI
Length = 1137
Score = 245 bits (625), Expect = 2e-63
Identities = 112/136 (82%), Positives = 129/136 (94%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIFMGPIYYQKLKHMVLDKMHAR SGPRV++TRQPTEG+S++GGLR+GEMERDCLIAYGA
Sbjct: 1001 YIFMGPIYYQKLKHMVLDKMHARASGPRVLLTRQPTEGRSRDGGLRLGEMERDCLIAYGA 1060
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI+ERLM+SSDP++VQVCR CGLLGYYN+KLK + C+ CKNG+N+A M+LPYACKLLF
Sbjct: 1061 SMLIFERLMLSSDPYQVQVCRKCGLLGYYNHKLKTSYCSMCKNGENMAKMRLPYACKLLF 1120
Query: 236 QELQSMNVVPRLKLTE 189
QEL +MNVVPRLKLTE
Sbjct: 1121 QELHAMNVVPRLKLTE 1136
[12][TOP]
>UniRef100_A9RNX6 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9RNX6_PHYPA
Length = 1135
Score = 239 bits (609), Expect = 2e-61
Identities = 110/137 (80%), Positives = 126/137 (91%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIFMGPIYYQKLKHMVLDKMHAR GPRV++TRQPTEG+S+ GGLR+GEMERDCLIAYGA
Sbjct: 999 YIFMGPIYYQKLKHMVLDKMHARARGPRVVLTRQPTEGRSREGGLRLGEMERDCLIAYGA 1058
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SM+I ERLMISSD F++QVC CG++GYY++KLK +C+TCK+GDNIATMKLPYACKLLF
Sbjct: 1059 SMMILERLMISSDQFQIQVCTKCGMIGYYHHKLKICLCSTCKSGDNIATMKLPYACKLLF 1118
Query: 236 QELQSMNVVPRLKLTEA 186
QELQSMN+VPRL L EA
Sbjct: 1119 QELQSMNIVPRLTLAEA 1135
[13][TOP]
>UniRef100_A4RS40 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RS40_OSTLU
Length = 1146
Score = 211 bits (536), Expect = 5e-53
Identities = 97/136 (71%), Positives = 114/136 (83%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+FMGP+YYQKLKHMV DKMHAR GPRV++TRQPTEG++++GGLR+GEMERDCLI YGAS
Sbjct: 1011 VFMGPVYYQKLKHMVQDKMHARARGPRVVLTRQPTEGRARDGGLRLGEMERDCLIGYGAS 1070
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
LI ERLMISSD FE QVC CGLLG+ ++ ++ CT CK +AT+KLPYACKLLFQ
Sbjct: 1071 QLILERLMISSDQFEAQVCTKCGLLGFQHHITRRNACTLCKTEAEVATLKLPYACKLLFQ 1130
Query: 233 ELQSMNVVPRLKLTEA 186
ELQSMN+ PRL LTEA
Sbjct: 1131 ELQSMNIAPRLSLTEA 1146
[14][TOP]
>UniRef100_C1FIF0 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1FIF0_9CHLO
Length = 1159
Score = 209 bits (533), Expect = 1e-52
Identities = 96/137 (70%), Positives = 116/137 (84%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIFMGP+YYQKLKHMVLDKMHAR GPRV++TRQPTEG++++GGLR+GEMERDCLI YGA
Sbjct: 1023 YIFMGPVYYQKLKHMVLDKMHARARGPRVVLTRQPTEGRARDGGLRLGEMERDCLIGYGA 1082
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+MLI ERLMISSD FE QVC CGLLGY ++ + +C C +G ++ +KLPYACKLLF
Sbjct: 1083 AMLILERLMISSDQFEAQVCTNCGLLGYKHHGTGRNLCQQCADGGTVSALKLPYACKLLF 1142
Query: 236 QELQSMNVVPRLKLTEA 186
QELQSMN+ PRL L++A
Sbjct: 1143 QELQSMNICPRLTLSDA 1159
[15][TOP]
>UniRef100_C1N4K3 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N4K3_9CHLO
Length = 1197
Score = 204 bits (520), Expect = 3e-51
Identities = 96/137 (70%), Positives = 114/137 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIFMGP+YYQKLKHMVLDKMHAR GPRV++TRQPTEG++++GGLR+GEMERDCLI YGA
Sbjct: 1062 YIFMGPVYYQKLKHMVLDKMHARARGPRVVLTRQPTEGRARDGGLRLGEMERDCLIGYGA 1121
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S LI ERLMISSD FE QVC CGLL Y ++ K C C++ D ++ +KLPYACKLLF
Sbjct: 1122 SALILERLMISSDQFEAQVCNKCGLLAYRHHGTGKDACAQCEDAD-VSALKLPYACKLLF 1180
Query: 236 QELQSMNVVPRLKLTEA 186
QELQSMN+ PRL L++A
Sbjct: 1181 QELQSMNICPRLTLSDA 1197
[16][TOP]
>UniRef100_UPI000180BF5A PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide
B n=1 Tax=Ciona intestinalis RepID=UPI000180BF5A
Length = 1141
Score = 202 bits (514), Expect = 2e-50
Identities = 95/134 (70%), Positives = 110/134 (82%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S +GGLR+GEMERDCLI YGA
Sbjct: 1009 YIYQGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSHDGGLRLGEMERDCLIGYGA 1068
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ N+AT+K+PYACKLLF
Sbjct: 1069 SMLLLERLMISSDQFEVDVCGKCGLLGYDGW------CQFCKSSKNVATLKIPYACKLLF 1122
Query: 236 QELQSMNVVPRLKL 195
QEL SMN++PRLKL
Sbjct: 1123 QELTSMNIIPRLKL 1136
[17][TOP]
>UniRef100_Q01FH9 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
RepID=Q01FH9_OSTTA
Length = 2569
Score = 202 bits (513), Expect = 2e-50
Identities = 94/136 (69%), Positives = 110/136 (80%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+FMGP+YYQKLKHMV DKMHAR GPRV++TRQPTEG++++GGLR+GEMERDCLI YGAS
Sbjct: 1041 VFMGPVYYQKLKHMVQDKMHARARGPRVVLTRQPTEGRARDGGLRLGEMERDCLIGYGAS 1100
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
LI ERLMISSD FE QVC CGLLG+ ++ K CT CK +AT+KLPYA KLLFQ
Sbjct: 1101 QLILERLMISSDQFEAQVCTKCGLLGFQHHITGKNACTLCKTEAEVATLKLPYAAKLLFQ 1160
Query: 233 ELQSMNVVPRLKLTEA 186
ELQS N+ PR+ L EA
Sbjct: 1161 ELQSCNIAPRINLAEA 1176
[18][TOP]
>UniRef100_Q4S7G7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon nigroviridis
RepID=Q4S7G7_TETNG
Length = 1171
Score = 201 bits (512), Expect = 3e-50
Identities = 93/139 (66%), Positives = 116/139 (83%), Gaps = 4/139 (2%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1029 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1088
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKA----VCTTCKNGDNIATMKLPYAC 249
SML+ ERLMISSD FEV VC CGLLGY +++K + C CK+ ++++++PYAC
Sbjct: 1089 SMLLLERLMISSDAFEVDVCGQCGLLGYSGWQVKLSHLDLECHYCKSSCQVSSLRIPYAC 1148
Query: 248 KLLFQELQSMNVVPRLKLT 192
KLLFQELQSMN++PRLKL+
Sbjct: 1149 KLLFQELQSMNIIPRLKLS 1167
[19][TOP]
>UniRef100_C3YYC3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3YYC3_BRAFL
Length = 1137
Score = 201 bits (510), Expect = 5e-50
Identities = 93/136 (68%), Positives = 112/136 (82%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDK+HAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1005 YIYTGPVYYQKLKHMVLDKIHARAKGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1064
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ N++++K+PYACKLLF
Sbjct: 1065 SMLLLERLMISSDQFEVDVCGECGLLGYSGW------CQYCKSSRNVSSLKMPYACKLLF 1118
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN+ PRLKL +
Sbjct: 1119 QELQSMNIAPRLKLVK 1134
[20][TOP]
>UniRef100_B9WLY1 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WLY1_CANDC
Length = 1157
Score = 201 bits (510), Expect = 5e-50
Identities = 94/134 (70%), Positives = 110/134 (82%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC+IAYGA
Sbjct: 1026 YIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA 1085
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD FEV VC CGL+GY N+ CTTCK+ +N+ M +PYA KLLF
Sbjct: 1086 SQLLLERLMISSDAFEVDVCNKCGLMGYNNW------CTTCKSSENVIKMTIPYAAKLLF 1139
Query: 236 QELQSMNVVPRLKL 195
QEL SMN+ PRL+L
Sbjct: 1140 QELLSMNIAPRLRL 1153
[21][TOP]
>UniRef100_UPI0001560749 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
(RNA polymerase III subunit C2) (DNA-directed RNA
polymerase III subunit B) (DNA-directed RNA polymerase
III 127.6 kDa polypeptide) (C128) n=1 Tax=Equus caballus
RepID=UPI0001560749
Length = 1133
Score = 200 bits (508), Expect = 8e-50
Identities = 92/136 (67%), Positives = 114/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1001 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1060
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1061 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 1114
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL++
Sbjct: 1115 QELQSMNIIPRLKLSK 1130
[22][TOP]
>UniRef100_UPI000155CB1A PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide
B n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155CB1A
Length = 1113
Score = 200 bits (508), Expect = 8e-50
Identities = 92/136 (67%), Positives = 114/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 981 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1040
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1041 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 1094
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL++
Sbjct: 1095 QELQSMNIIPRLKLSK 1110
[23][TOP]
>UniRef100_UPI0000E23379 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide B isoform
2 n=1 Tax=Pan troglodytes RepID=UPI0000E23379
Length = 1133
Score = 200 bits (508), Expect = 8e-50
Identities = 92/136 (67%), Positives = 114/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1001 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1060
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1061 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 1114
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL++
Sbjct: 1115 QELQSMNIIPRLKLSK 1130
[24][TOP]
>UniRef100_UPI00005EAC23 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide
B n=1 Tax=Monodelphis domestica RepID=UPI00005EAC23
Length = 1133
Score = 200 bits (508), Expect = 8e-50
Identities = 92/136 (67%), Positives = 114/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1001 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1060
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1061 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 1114
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL++
Sbjct: 1115 QELQSMNIIPRLKLSK 1130
[25][TOP]
>UniRef100_UPI00005A223E PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6
kDa polypeptide (RNA polymerase III subunit 2) (RPC2) n=1
Tax=Canis lupus familiaris RepID=UPI00005A223E
Length = 1133
Score = 200 bits (508), Expect = 8e-50
Identities = 92/136 (67%), Positives = 114/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1001 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1060
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1061 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 1114
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL++
Sbjct: 1115 QELQSMNIIPRLKLSK 1130
[26][TOP]
>UniRef100_UPI000179EFE0 UPI000179EFE0 related cluster n=1 Tax=Bos taurus RepID=UPI000179EFE0
Length = 796
Score = 200 bits (508), Expect = 8e-50
Identities = 92/136 (67%), Positives = 114/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 664 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 723
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 724 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHFCKSSCHVSSLRIPYACKLLF 777
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL++
Sbjct: 778 QELQSMNIIPRLKLSK 793
[27][TOP]
>UniRef100_UPI0000F339C2 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
(RNA polymerase III subunit C2) (DNA-directed RNA
polymerase III subunit B) (DNA-directed RNA polymerase
III 127.6 kDa polypeptide) (C128) n=1 Tax=Bos taurus
RepID=UPI0000F339C2
Length = 1133
Score = 200 bits (508), Expect = 8e-50
Identities = 92/136 (67%), Positives = 114/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1001 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1060
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1061 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHFCKSSCHVSSLRIPYACKLLF 1114
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL++
Sbjct: 1115 QELQSMNIIPRLKLSK 1130
[28][TOP]
>UniRef100_Q5NVB0 Putative uncharacterized protein DKFZp469K1717 n=1 Tax=Pongo abelii
RepID=Q5NVB0_PONAB
Length = 1116
Score = 200 bits (508), Expect = 8e-50
Identities = 92/136 (67%), Positives = 114/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 984 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1043
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1044 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 1097
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL++
Sbjct: 1098 QELQSMNIIPRLKLSK 1113
[29][TOP]
>UniRef100_Q7Z3R8 DNA-directed RNA polymerase n=2 Tax=Homininae RepID=Q7Z3R8_HUMAN
Length = 1133
Score = 200 bits (508), Expect = 8e-50
Identities = 92/136 (67%), Positives = 114/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1001 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1060
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1061 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 1114
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL++
Sbjct: 1115 QELQSMNIIPRLKLSK 1130
[30][TOP]
>UniRef100_B3KV73 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KV73_HUMAN
Length = 1075
Score = 200 bits (508), Expect = 8e-50
Identities = 92/136 (67%), Positives = 114/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 943 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1002
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1003 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 1056
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL++
Sbjct: 1057 QELQSMNIIPRLKLSK 1072
[31][TOP]
>UniRef100_B3KRQ8 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KRQ8_HUMAN
Length = 838
Score = 200 bits (508), Expect = 8e-50
Identities = 92/136 (67%), Positives = 114/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 706 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 765
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 766 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 819
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL++
Sbjct: 820 QELQSMNIIPRLKLSK 835
[32][TOP]
>UniRef100_Q9NW08 DNA-directed RNA polymerase III subunit RPC2 n=2 Tax=Homo sapiens
RepID=RPC2_HUMAN
Length = 1133
Score = 200 bits (508), Expect = 8e-50
Identities = 92/136 (67%), Positives = 114/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1001 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1060
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1061 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 1114
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL++
Sbjct: 1115 QELQSMNIIPRLKLSK 1130
[33][TOP]
>UniRef100_UPI000194E18E PREDICTED: hypothetical protein n=1 Tax=Taeniopygia guttata
RepID=UPI000194E18E
Length = 1280
Score = 199 bits (507), Expect = 1e-49
Identities = 92/136 (67%), Positives = 113/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1148 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1207
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1208 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 1261
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL +
Sbjct: 1262 QELQSMNIIPRLKLAK 1277
[34][TOP]
>UniRef100_UPI0000E7F911 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide
B n=1 Tax=Gallus gallus RepID=UPI0000E7F911
Length = 1126
Score = 199 bits (507), Expect = 1e-49
Identities = 92/136 (67%), Positives = 113/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 994 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1053
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1054 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 1107
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL +
Sbjct: 1108 QELQSMNIIPRLKLAK 1123
[35][TOP]
>UniRef100_UPI0000503D79 polymerase (RNA) III (DNA directed) polypeptide B n=2 Tax=Rattus
norvegicus RepID=UPI0000503D79
Length = 1133
Score = 199 bits (507), Expect = 1e-49
Identities = 92/136 (67%), Positives = 113/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1001 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1060
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1061 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 1114
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL +
Sbjct: 1115 QELQSMNIIPRLKLAK 1130
[36][TOP]
>UniRef100_UPI00006A103B DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
polymerase III subunit C2) (DNA-directed RNA polymerase
III subunit B) (DNA-directed RNA polymerase III 127.6 kDa
polypeptide) (C128). n=1 Tax=Xenopus (Silurana)
tropicalis RepID=UPI00006A103B
Length = 1122
Score = 199 bits (507), Expect = 1e-49
Identities = 92/136 (67%), Positives = 113/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 990 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1049
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1050 SMLLLERLMISSDAFEVDVCGKCGLLGYSGW------CHFCKSSCHVSSLRIPYACKLLF 1103
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL +
Sbjct: 1104 QELQSMNIIPRLKLAK 1119
[37][TOP]
>UniRef100_UPI00004DA04E DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
polymerase III subunit C2) (DNA-directed RNA polymerase
III subunit B) (DNA-directed RNA polymerase III 127.6 kDa
polypeptide) (C128). n=1 Tax=Xenopus (Silurana)
tropicalis RepID=UPI00004DA04E
Length = 1136
Score = 199 bits (507), Expect = 1e-49
Identities = 92/136 (67%), Positives = 113/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1004 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1063
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1064 SMLLLERLMISSDAFEVDVCGKCGLLGYSGW------CHFCKSSCHVSSLRIPYACKLLF 1117
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL +
Sbjct: 1118 QELQSMNIIPRLKLAK 1133
[38][TOP]
>UniRef100_UPI00016E4F58 UPI00016E4F58 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E4F58
Length = 1118
Score = 199 bits (507), Expect = 1e-49
Identities = 92/135 (68%), Positives = 113/135 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 986 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1045
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1046 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 1099
Query: 236 QELQSMNVVPRLKLT 192
QELQSMN++PRLKL+
Sbjct: 1100 QELQSMNIIPRLKLS 1114
[39][TOP]
>UniRef100_UPI00016E4F57 UPI00016E4F57 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E4F57
Length = 1132
Score = 199 bits (507), Expect = 1e-49
Identities = 92/135 (68%), Positives = 113/135 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1000 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1059
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1060 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 1113
Query: 236 QELQSMNVVPRLKLT 192
QELQSMN++PRLKL+
Sbjct: 1114 QELQSMNIIPRLKLS 1128
[40][TOP]
>UniRef100_UPI0000ECD29F DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
polymerase III subunit C2) (DNA-directed RNA polymerase
III subunit B) (DNA-directed RNA polymerase III 127.6 kDa
polypeptide) (C128). n=1 Tax=Gallus gallus
RepID=UPI0000ECD29F
Length = 1132
Score = 199 bits (507), Expect = 1e-49
Identities = 92/136 (67%), Positives = 113/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1000 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1059
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1060 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 1113
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL +
Sbjct: 1114 QELQSMNIIPRLKLAK 1129
[41][TOP]
>UniRef100_B2GUR3 DNA-directed RNA polymerase n=1 Tax=Xenopus (Silurana) tropicalis
RepID=B2GUR3_XENTR
Length = 1134
Score = 199 bits (507), Expect = 1e-49
Identities = 92/136 (67%), Positives = 113/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1002 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1061
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1062 SMLLLERLMISSDAFEVDVCGKCGLLGYSGW------CHFCKSSCHVSSLRIPYACKLLF 1115
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL +
Sbjct: 1116 QELQSMNIIPRLKLAK 1131
[42][TOP]
>UniRef100_P59470 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Mus musculus
RepID=RPC2_MOUSE
Length = 1133
Score = 199 bits (507), Expect = 1e-49
Identities = 92/136 (67%), Positives = 113/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1001 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1060
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1061 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 1114
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL +
Sbjct: 1115 QELQSMNIIPRLKLAK 1130
[43][TOP]
>UniRef100_UPI00017B31AA UPI00017B31AA related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B31AA
Length = 1153
Score = 199 bits (506), Expect = 1e-49
Identities = 92/135 (68%), Positives = 112/135 (82%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1025 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1084
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ ++++++PYACKLLF
Sbjct: 1085 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCQVSSLRIPYACKLLF 1138
Query: 236 QELQSMNVVPRLKLT 192
QELQSMN++PRLKL+
Sbjct: 1139 QELQSMNIIPRLKLS 1153
[44][TOP]
>UniRef100_UPI00017B31A9 UPI00017B31A9 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B31A9
Length = 1132
Score = 199 bits (506), Expect = 1e-49
Identities = 92/135 (68%), Positives = 112/135 (82%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1000 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1059
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ ++++++PYACKLLF
Sbjct: 1060 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCQVSSLRIPYACKLLF 1113
Query: 236 QELQSMNVVPRLKLT 192
QELQSMN++PRLKL+
Sbjct: 1114 QELQSMNIIPRLKLS 1128
[45][TOP]
>UniRef100_C0PUS9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Salmo salar
RepID=C0PUS9_SALSA
Length = 814
Score = 199 bits (506), Expect = 1e-49
Identities = 92/134 (68%), Positives = 112/134 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 682 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 741
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 742 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 795
Query: 236 QELQSMNVVPRLKL 195
QELQSMN++PRLKL
Sbjct: 796 QELQSMNIIPRLKL 809
[46][TOP]
>UniRef100_A2BG99 DNA-directed RNA polymerase n=1 Tax=Danio rerio RepID=A2BG99_DANRE
Length = 1130
Score = 199 bits (506), Expect = 1e-49
Identities = 92/134 (68%), Positives = 112/134 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 998 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1057
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 1058 SMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 1111
Query: 236 QELQSMNVVPRLKL 195
QELQSMN++PRLKL
Sbjct: 1112 QELQSMNIIPRLKL 1125
[47][TOP]
>UniRef100_C5M3E6 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404
RepID=C5M3E6_CANTT
Length = 1159
Score = 199 bits (506), Expect = 1e-49
Identities = 93/134 (69%), Positives = 110/134 (82%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC+IAYGA
Sbjct: 1028 YIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA 1087
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD FEV VC CGL+GY N+ CTTC++ +N+ M +PYA KLLF
Sbjct: 1088 SQLLLERLMISSDAFEVDVCNKCGLMGYNNW------CTTCQSSENVIKMTIPYAAKLLF 1141
Query: 236 QELQSMNVVPRLKL 195
QEL SMN+ PRL+L
Sbjct: 1142 QELLSMNIAPRLRL 1155
[48][TOP]
>UniRef100_B3KQY9 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KQY9_HUMAN
Length = 523
Score = 199 bits (505), Expect = 2e-49
Identities = 91/136 (66%), Positives = 114/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 391 YIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 450
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ML+ ERLMISSD FEV VC CGLLGY + C CK+ +++++++PYACKLLF
Sbjct: 451 NMLLLERLMISSDAFEVDVCGQCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLF 504
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRLKL++
Sbjct: 505 QELQSMNIIPRLKLSK 520
[49][TOP]
>UniRef100_Q59M52 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q59M52_CANAL
Length = 1157
Score = 199 bits (505), Expect = 2e-49
Identities = 93/134 (69%), Positives = 110/134 (82%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC+IAYGA
Sbjct: 1026 YIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA 1085
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD FEV VC CGL+GY ++ CTTCK+ +N+ M +PYA KLLF
Sbjct: 1086 SQLLLERLMISSDAFEVDVCNKCGLMGYNSW------CTTCKSSENVIKMTIPYAAKLLF 1139
Query: 236 QELQSMNVVPRLKL 195
QEL SMN+ PRL+L
Sbjct: 1140 QELLSMNIAPRLRL 1153
[50][TOP]
>UniRef100_A5E0Z1 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E0Z1_LODEL
Length = 1157
Score = 199 bits (505), Expect = 2e-49
Identities = 94/134 (70%), Positives = 109/134 (81%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC+IAYGA
Sbjct: 1026 YIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA 1085
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD FEV VC CGL+GY ++ CTTCK +NI M +PYA KLLF
Sbjct: 1086 SQLLLERLMISSDAFEVDVCNKCGLMGYNSW------CTTCKGSENIIKMTIPYAAKLLF 1139
Query: 236 QELQSMNVVPRLKL 195
QEL SMN+ PRL+L
Sbjct: 1140 QELLSMNIAPRLRL 1153
[51][TOP]
>UniRef100_A8IY03 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IY03_CHLRE
Length = 1161
Score = 198 bits (504), Expect = 2e-49
Identities = 94/136 (69%), Positives = 114/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIFMGP+YYQKLKHMVLDKMHAR GPRV++TRQPTEG+S++GGLR+GEMERDCLIAYGA
Sbjct: 1025 YIFMGPVYYQKLKHMVLDKMHARARGPRVVLTRQPTEGRSRDGGLRLGEMERDCLIAYGA 1084
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV+ GLLG+++ V + DN+AT+K+PYACKLLF
Sbjct: 1085 SMLLLERLMISSDQFEVRARVCVGLLGWWDAHRNCPVSPVDRTSDNMATIKIPYACKLLF 1144
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRL+L +
Sbjct: 1145 QELQSMNIIPRLRLAD 1160
[52][TOP]
>UniRef100_B6AC47 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AC47_9CRYT
Length = 1219
Score = 198 bits (504), Expect = 2e-49
Identities = 92/133 (69%), Positives = 111/133 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF+GPI+YQKL+HMVLDKMHARG GPR ++TRQPTEG+SK+GGLR+GEMERDCL+AYGA
Sbjct: 1091 YIFVGPIFYQKLRHMVLDKMHARGRGPRQILTRQPTEGRSKDGGLRLGEMERDCLVAYGA 1150
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM++SD FE VC CGL GY NY C C+N D+I+ ++LPYACKLLF
Sbjct: 1151 SNLLIERLMLNSDVFETYVCNKCGLFGYNNY------CHYCRNSDDISIIRLPYACKLLF 1204
Query: 236 QELQSMNVVPRLK 198
QELQ+MNV PR+K
Sbjct: 1205 QELQAMNVCPRIK 1217
[53][TOP]
>UniRef100_A8P4S3 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide,
putative n=1 Tax=Brugia malayi RepID=A8P4S3_BRUMA
Length = 1104
Score = 198 bits (504), Expect = 2e-49
Identities = 91/136 (66%), Positives = 114/136 (83%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG++++GGLR+GEMERDCLIAYGA
Sbjct: 972 YIYFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRARDGGLRLGEMERDCLIAYGA 1031
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLM+SSD F+V VC CGL+GY K+ C C++ +AT+K+PYACKLLF
Sbjct: 1032 SMLLMERLMVSSDEFKVDVCSQCGLIGY------KSWCQMCRSSRTMATIKIPYACKLLF 1085
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN+VP++ L++
Sbjct: 1086 QELQSMNIVPKISLSK 1101
[54][TOP]
>UniRef100_C5DEU3 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DEU3_LACTC
Length = 1144
Score = 198 bits (504), Expect = 2e-49
Identities = 94/140 (67%), Positives = 110/140 (78%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC+IAYGA
Sbjct: 1011 YIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA 1070
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD FEV VC CGL+GY + CT+CK +N+ M +PYA KLLF
Sbjct: 1071 SQLLLERLMISSDAFEVDVCNKCGLMGYSGW------CTSCKGAENVIKMTIPYAAKLLF 1124
Query: 236 QELQSMNVVPRLKLTEA*SQ 177
QEL SMN+ PRLKL + Q
Sbjct: 1125 QELLSMNIAPRLKLEDVFEQ 1144
[55][TOP]
>UniRef100_P22276 DNA-directed RNA polymerase III subunit RPC2 n=5 Tax=Saccharomyces
cerevisiae RepID=RPC2_YEAST
Length = 1149
Score = 198 bits (504), Expect = 2e-49
Identities = 94/136 (69%), Positives = 110/136 (80%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC+IAYGA
Sbjct: 1016 YIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA 1075
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD FEV VC CGL+GY + CTTCK+ +NI M +PYA KLLF
Sbjct: 1076 SQLLLERLMISSDAFEVDVCDKCGLMGYSGW------CTTCKSAENIIKMTIPYAAKLLF 1129
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMN+ PRL+L +
Sbjct: 1130 QELLSMNIAPRLRLED 1145
[56][TOP]
>UniRef100_UPI000151B156 DNA-directed RNA polymerase III 130 kDa polypeptide n=1 Tax=Pichia
guilliermondii ATCC 6260 RepID=UPI000151B156
Length = 1156
Score = 197 bits (502), Expect = 4e-49
Identities = 92/136 (67%), Positives = 111/136 (81%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC+IAYGA
Sbjct: 1025 YIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA 1084
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD FEV VC CGL+GY ++ CT+CK+ +N+ M +PYA KLLF
Sbjct: 1085 SQLLLERLMLSSDAFEVDVCNNCGLMGYNSW------CTSCKSSENVIKMTIPYAAKLLF 1138
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMN+ PRLKL +
Sbjct: 1139 QELLSMNIAPRLKLDD 1154
[57][TOP]
>UniRef100_A5DLE5 DNA-directed RNA polymerase n=1 Tax=Pichia guilliermondii
RepID=A5DLE5_PICGU
Length = 1156
Score = 197 bits (502), Expect = 4e-49
Identities = 92/136 (67%), Positives = 111/136 (81%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC+IAYGA
Sbjct: 1025 YIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA 1084
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD FEV VC CGL+GY ++ CT+CK+ +N+ M +PYA KLLF
Sbjct: 1085 SQLLLERLMLSSDAFEVDVCNNCGLMGYNSW------CTSCKSSENVIKMTIPYAAKLLF 1138
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMN+ PRLKL +
Sbjct: 1139 QELLSMNIAPRLKLDD 1154
[58][TOP]
>UniRef100_Q5CPZ8 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium parvum Iowa II
RepID=Q5CPZ8_CRYPV
Length = 1287
Score = 197 bits (500), Expect = 7e-49
Identities = 91/133 (68%), Positives = 110/133 (82%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF+GPIYYQKLKHMVLDKMHARG GPR ++TRQPTEG+SK+GGLR+GEMERDCL+AYGA
Sbjct: 1157 YIFVGPIYYQKLKHMVLDKMHARGRGPRQILTRQPTEGRSKDGGLRLGEMERDCLVAYGA 1216
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM++SD FE VC CGL GY NY C CK+ +++ ++LPYACKLLF
Sbjct: 1217 SNLLIERLMLNSDVFETNVCNQCGLFGYNNY------CHYCKSSQDVSIIRLPYACKLLF 1270
Query: 236 QELQSMNVVPRLK 198
QELQ+MNV PR++
Sbjct: 1271 QELQAMNVCPRIR 1283
[59][TOP]
>UniRef100_A3LP81 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3LP81_PICST
Length = 1155
Score = 197 bits (500), Expect = 7e-49
Identities = 93/134 (69%), Positives = 110/134 (82%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC+IAYGA
Sbjct: 1024 YIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA 1083
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD FEV VC CGL+GY ++ CTTCK+ +++ M +PYA KLLF
Sbjct: 1084 SQLLLERLMISSDAFEVDVCNKCGLMGYNSW------CTTCKSFEHVIKMTIPYAAKLLF 1137
Query: 236 QELQSMNVVPRLKL 195
QEL SMN+ PRLKL
Sbjct: 1138 QELLSMNIAPRLKL 1151
[60][TOP]
>UniRef100_C4Y486 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720
RepID=C4Y486_CLAL4
Length = 1159
Score = 196 bits (498), Expect = 1e-48
Identities = 92/134 (68%), Positives = 110/134 (82%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC+IAYGA
Sbjct: 1028 YIFFGPIYYQKLKHMVLDKMHARSRGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA 1087
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD FEV VC CGL+GY ++ C+TCK+ +++ M +PYA KLLF
Sbjct: 1088 SQLLLERLMISSDAFEVDVCNNCGLMGYSSW------CSTCKSSEHVIKMTIPYAAKLLF 1141
Query: 236 QELQSMNVVPRLKL 195
QEL SMN+ PRLKL
Sbjct: 1142 QELLSMNIAPRLKL 1155
[61][TOP]
>UniRef100_B3S5S8 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3S5S8_TRIAD
Length = 1016
Score = 196 bits (497), Expect = 2e-48
Identities = 90/136 (66%), Positives = 111/136 (81%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GP+YYQ+LKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 884 YIFFGPVYYQRLKHMVLDKMHARAKGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGT 943
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV VC CGLL Y + C C + +++++++PYACKLLF
Sbjct: 944 SMLLVERLMISSDAFEVDVCNNCGLLAYSKW------CHYCHSSCHVSSLQIPYACKLLF 997
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMN++PRL LT+
Sbjct: 998 QELQSMNIIPRLSLTQ 1013
[62][TOP]
>UniRef100_Q75B52 DNA-directed RNA polymerase n=1 Tax=Eremothecium gossypii
RepID=Q75B52_ASHGO
Length = 1141
Score = 196 bits (497), Expect = 2e-48
Identities = 91/136 (66%), Positives = 110/136 (80%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC+IAYGA
Sbjct: 1008 YVFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA 1067
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD FEV VC CGL+GY + CT+CK+ ++I M +PYA KLLF
Sbjct: 1068 SQLLLERLMLSSDAFEVDVCNKCGLMGYSGW------CTSCKSAEHIIKMTIPYAAKLLF 1121
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMN+ PRLKL +
Sbjct: 1122 QELLSMNIAPRLKLED 1137
[63][TOP]
>UniRef100_C5DY85 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DY85_ZYGRC
Length = 1143
Score = 195 bits (495), Expect = 3e-48
Identities = 91/136 (66%), Positives = 110/136 (80%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC+IAYGA
Sbjct: 1010 YIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA 1069
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM SSD FEV+VC CGL+GY + CTTC++ ++I M +PYA KLLF
Sbjct: 1070 SQLLLERLMTSSDAFEVEVCEKCGLMGYSGW------CTTCRSAEHINKMSIPYAAKLLF 1123
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMN+ PRL+L +
Sbjct: 1124 QELLSMNIAPRLRLED 1139
[64][TOP]
>UniRef100_UPI00003BE866 hypothetical protein DEHA0G24574g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BE866
Length = 1165
Score = 194 bits (494), Expect = 3e-48
Identities = 91/134 (67%), Positives = 109/134 (81%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC+IAYGA
Sbjct: 1034 YIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA 1093
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD FEV +C CGL+GY ++ CT+CK+ + I M +PYA KLLF
Sbjct: 1094 SQLLLERLMLSSDAFEVDICNQCGLMGYNSW------CTSCKSSEYIIKMTIPYAAKLLF 1147
Query: 236 QELQSMNVVPRLKL 195
QEL SMN+ PRLKL
Sbjct: 1148 QELLSMNIAPRLKL 1161
[65][TOP]
>UniRef100_B5RUZ7 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RUZ7_DEBHA
Length = 1165
Score = 194 bits (494), Expect = 3e-48
Identities = 91/134 (67%), Positives = 109/134 (81%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC+IAYGA
Sbjct: 1034 YIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA 1093
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD FEV +C CGL+GY ++ CT+CK+ + I M +PYA KLLF
Sbjct: 1094 SQLLLERLMLSSDAFEVDICNQCGLMGYNSW------CTSCKSSEYIIKMTIPYAAKLLF 1147
Query: 236 QELQSMNVVPRLKL 195
QEL SMN+ PRLKL
Sbjct: 1148 QELLSMNIAPRLKL 1161
[66][TOP]
>UniRef100_Q27492 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis elegans
RepID=Q27492_CAEEL
Length = 1154
Score = 194 bits (493), Expect = 4e-48
Identities = 91/134 (67%), Positives = 108/134 (80%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GPIYYQKLKHMVLDKMHAR GPR +TRQPTEG+S+ GGLR+GEMERDCLIAYGA
Sbjct: 1022 YIYFGPIYYQKLKHMVLDKMHARARGPRAALTRQPTEGRSREGGLRLGEMERDCLIAYGA 1081
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLM+SSD F+V VC CG++G K C C++ ++A +K+PYACKLLF
Sbjct: 1082 SMLLIERLMVSSDEFKVDVCTGCGVIG------SKGWCQKCRSSKSMANIKIPYACKLLF 1135
Query: 236 QELQSMNVVPRLKL 195
QELQSMN+VPRL L
Sbjct: 1136 QELQSMNIVPRLDL 1149
[67][TOP]
>UniRef100_B6VBN7 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis brenneri
RepID=B6VBN7_CAEBE
Length = 1152
Score = 194 bits (493), Expect = 4e-48
Identities = 91/134 (67%), Positives = 108/134 (80%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GPIYYQKLKHMVLDKMHAR GPR +TRQPTEG+S+ GGLR+GEMERDCLIAYGA
Sbjct: 1020 YIYFGPIYYQKLKHMVLDKMHARARGPRAALTRQPTEGRSREGGLRLGEMERDCLIAYGA 1079
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLM+SSD F+V VC CG++G K C C++ ++A +K+PYACKLLF
Sbjct: 1080 SMLLIERLMVSSDEFKVDVCTGCGVIG------SKGWCQKCRSSKSMANIKIPYACKLLF 1133
Query: 236 QELQSMNVVPRLKL 195
QELQSMN+VPRL L
Sbjct: 1134 QELQSMNIVPRLDL 1147
[68][TOP]
>UniRef100_Q6CLR1 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CLR1_KLULA
Length = 1142
Score = 194 bits (493), Expect = 4e-48
Identities = 90/134 (67%), Positives = 108/134 (80%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC+IAYGA
Sbjct: 1009 YIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA 1068
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD FEV VC CGL+GY + CT+CK +++ M +PYA KLLF
Sbjct: 1069 SQLLLERLMLSSDAFEVDVCEKCGLMGYSGW------CTSCKTAEHVVKMTIPYAAKLLF 1122
Query: 236 QELQSMNVVPRLKL 195
QEL +MN+ PRLKL
Sbjct: 1123 QELLAMNIAPRLKL 1136
[69][TOP]
>UniRef100_Q6FLJ9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FLJ9_CANGA
Length = 1133
Score = 194 bits (492), Expect = 6e-48
Identities = 91/136 (66%), Positives = 110/136 (80%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC+IAYGA
Sbjct: 1000 YIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA 1059
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD FEV VC CGL+GY + C+TCK+ ++I M +PYA KLLF
Sbjct: 1060 SQLLLERLMISSDAFEVDVCSNCGLMGYSGW------CSTCKSAEHIIKMTIPYAAKLLF 1113
Query: 236 QELQSMNVVPRLKLTE 189
QEL +MN+ PRL+L +
Sbjct: 1114 QELLAMNIAPRLRLED 1129
[70][TOP]
>UniRef100_B6JW67 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JW67_SCHJY
Length = 1160
Score = 193 bits (491), Expect = 8e-48
Identities = 91/136 (66%), Positives = 108/136 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYGA
Sbjct: 1027 YIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGA 1086
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD FEV VC CGLLGY K C +C++ ++ M +PYA KLLF
Sbjct: 1087 SQLLLERLMLSSDAFEVDVCENCGLLGY------KGWCNSCESSKHVVKMTIPYAAKLLF 1140
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMN++PRL L +
Sbjct: 1141 QELMSMNIIPRLALED 1156
[71][TOP]
>UniRef100_UPI0000E4965C PREDICTED: similar to RNA polymerase III subunit RPC2, partial n=1
Tax=Strongylocentrotus purpuratus RepID=UPI0000E4965C
Length = 313
Score = 193 bits (490), Expect = 1e-47
Identities = 88/134 (65%), Positives = 110/134 (82%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG++++GGLR+GEMERDCLI YGA
Sbjct: 181 YIYFGPVYYQKLKHMVLDKMHARAKGPRAVLTRQPTEGRARDGGLRLGEMERDCLIGYGA 240
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD F+V VC CGL+G+ + C C NI+++++PYACKLLF
Sbjct: 241 SMLLLERLMISSDQFQVDVCGDCGLIGHSGW------CPYCHCSQNISSLRIPYACKLLF 294
Query: 236 QELQSMNVVPRLKL 195
QELQSMN++PRL+L
Sbjct: 295 QELQSMNIIPRLRL 308
[72][TOP]
>UniRef100_UPI0000E487B4 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide
B n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E487B4
Length = 830
Score = 193 bits (490), Expect = 1e-47
Identities = 88/134 (65%), Positives = 110/134 (82%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMVLDKMHAR GPR ++TRQPTEG++++GGLR+GEMERDCLI YGA
Sbjct: 698 YIYFGPVYYQKLKHMVLDKMHARAKGPRAVLTRQPTEGRARDGGLRLGEMERDCLIGYGA 757
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD F+V VC CGL+G+ + C C NI+++++PYACKLLF
Sbjct: 758 SMLLLERLMISSDQFQVDVCGDCGLIGHSGW------CPYCHCSQNISSLRIPYACKLLF 811
Query: 236 QELQSMNVVPRLKL 195
QELQSMN++PRL+L
Sbjct: 812 QELQSMNIIPRLRL 825
[73][TOP]
>UniRef100_B8BQM2 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BQM2_THAPS
Length = 1108
Score = 192 bits (489), Expect = 1e-47
Identities = 90/136 (66%), Positives = 110/136 (80%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GP++YQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYGA
Sbjct: 978 YIFSGPVFYQKLKHMVLDKMHARSRGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGA 1037
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S LI ERLM SSD F VC CGLL Y N+ C C++G+ ++ ++LPYACKLLF
Sbjct: 1038 SNLIMERLMHSSDAFSASVCMTCGLLQYQNW------CQYCRSGEKVSDIRLPYACKLLF 1091
Query: 236 QELQSMNVVPRLKLTE 189
QELQ+MNV+PRL+L +
Sbjct: 1092 QELQAMNVLPRLRLKD 1107
[74][TOP]
>UniRef100_C4R793 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R793_PICPG
Length = 1158
Score = 192 bits (489), Expect = 1e-47
Identities = 91/134 (67%), Positives = 107/134 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC++AYGA
Sbjct: 1027 YIFFGPIYYQKLKHMVLDKMHARSRGPRAVLTRQPTEGRSRDGGLRLGEMERDCVVAYGA 1086
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD FEV VC CGL+GY + C TCK+ + I M +PYA KLLF
Sbjct: 1087 SQLLLERLMISSDAFEVDVCNTCGLMGYNGW------CPTCKSSEFIIKMTIPYAAKLLF 1140
Query: 236 QELQSMNVVPRLKL 195
QEL SMN+ PRL+L
Sbjct: 1141 QELVSMNIAPRLEL 1154
[75][TOP]
>UniRef100_A7TQC8 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM
70294 RepID=A7TQC8_VANPO
Length = 1139
Score = 192 bits (487), Expect = 2e-47
Identities = 91/136 (66%), Positives = 109/136 (80%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMVLDKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC+IAYGA
Sbjct: 1006 YIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA 1065
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD FEV VC CGL+GY + C+TCK+ ++ M +PYA KLLF
Sbjct: 1066 SQLLLERLMISSDAFEVDVCDKCGLMGYSGW------CSTCKSAEHNNKMTIPYAAKLLF 1119
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMN+ PRL+L +
Sbjct: 1120 QELLSMNIAPRLRLED 1135
[76][TOP]
>UniRef100_UPI00015B53C8 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide
B n=1 Tax=Nasonia vitripennis RepID=UPI00015B53C8
Length = 1127
Score = 191 bits (486), Expect = 3e-47
Identities = 88/134 (65%), Positives = 108/134 (80%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMV DKMHAR GPR ++TRQPTEG+SK+GGLR+GEMERDCLI YGA
Sbjct: 995 YIYSGPVYYQKLKHMVQDKMHARARGPRAVLTRQPTEGRSKDGGLRLGEMERDCLIGYGA 1054
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SM++ ERLM+SSD F+V VC CGL+ Y Y C +C++ ++T+ +PYACKLLF
Sbjct: 1055 SMMLIERLMLSSDAFDVDVCNKCGLMAYTGY------CHSCRSSACVSTITMPYACKLLF 1108
Query: 236 QELQSMNVVPRLKL 195
QELQSMN+VPRL L
Sbjct: 1109 QELQSMNIVPRLTL 1122
[77][TOP]
>UniRef100_B9Q403 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii VEG
RepID=B9Q403_TOXGO
Length = 1324
Score = 191 bits (486), Expect = 3e-47
Identities = 88/136 (64%), Positives = 108/136 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMV DK+HARG GPR ++TRQPTEG++K GGLR+GEMERDCL+AYG+
Sbjct: 1194 YVFAGPIYYQKLKHMVQDKIHARGRGPRQLLTRQPTEGRAKEGGLRLGEMERDCLVAYGS 1253
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD FE VC CGL+GY + C CK+G ++A +++PYACKLLF
Sbjct: 1254 SALLMERLMLSSDVFEASVCSTCGLMGYEGW------CPYCKSGKHVAPIRMPYACKLLF 1307
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV PRL + E
Sbjct: 1308 QELMSMNVCPRLHIKE 1323
[78][TOP]
>UniRef100_B9PFT5 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii GT1
RepID=B9PFT5_TOXGO
Length = 1328
Score = 191 bits (486), Expect = 3e-47
Identities = 88/136 (64%), Positives = 108/136 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMV DK+HARG GPR ++TRQPTEG++K GGLR+GEMERDCL+AYG+
Sbjct: 1198 YVFAGPIYYQKLKHMVQDKIHARGRGPRQLLTRQPTEGRAKEGGLRLGEMERDCLVAYGS 1257
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD FE VC CGL+GY + C CK+G ++A +++PYACKLLF
Sbjct: 1258 SALLMERLMLSSDVFEASVCSTCGLMGYEGW------CPYCKSGKHVAPIRMPYACKLLF 1311
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV PRL + E
Sbjct: 1312 QELMSMNVCPRLHIKE 1327
[79][TOP]
>UniRef100_B6KDI3 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
RepID=B6KDI3_TOXGO
Length = 1332
Score = 191 bits (486), Expect = 3e-47
Identities = 88/136 (64%), Positives = 108/136 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMV DK+HARG GPR ++TRQPTEG++K GGLR+GEMERDCL+AYG+
Sbjct: 1202 YVFAGPIYYQKLKHMVQDKIHARGRGPRQLLTRQPTEGRAKEGGLRLGEMERDCLVAYGS 1261
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD FE VC CGL+GY + C CK+G ++A +++PYACKLLF
Sbjct: 1262 SALLMERLMLSSDVFEASVCSTCGLMGYEGW------CPYCKSGKHVAPIRMPYACKLLF 1315
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV PRL + E
Sbjct: 1316 QELMSMNVCPRLHIKE 1331
[80][TOP]
>UniRef100_Q54IZ9 Ddi rpc2 intein n=1 Tax=Dictyostelium discoideum RepID=RPC2_DICDI
Length = 1608
Score = 191 bits (485), Expect = 4e-47
Identities = 90/137 (65%), Positives = 109/137 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
+IF GPI+YQKLKHMV+DKMHAR GP V +TRQPTEG+++ GGLR+GEMERDCLI YGA
Sbjct: 1478 FIFFGPIFYQKLKHMVMDKMHARARGPTVTLTRQPTEGRARGGGLRLGEMERDCLIGYGA 1537
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S LI ERLMISSD F V C+ CG LGY Y C CK+ +I+T+++PYACKLLF
Sbjct: 1538 SALIMERLMISSDRFTVYACKNCGFLGYEGY------CQYCKSSVDISTIQIPYACKLLF 1591
Query: 236 QELQSMNVVPRLKLTEA 186
QELQ+MN+VPRLKL ++
Sbjct: 1592 QELQAMNIVPRLKLVDS 1608
[81][TOP]
>UniRef100_Q7Q416 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7Q416_ANOGA
Length = 1089
Score = 190 bits (483), Expect = 6e-47
Identities = 88/134 (65%), Positives = 108/134 (80%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMV DKMHAR GPR ++TRQPT+G+S+ GGLR+GEMERDCLI+YGA
Sbjct: 959 YIYSGPVYYQKLKHMVQDKMHARARGPRAVLTRQPTQGRSREGGLRLGEMERDCLISYGA 1018
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI ERLMISSD F+V VC CG L Y ++ C C++ +++T+ +PYACKLLF
Sbjct: 1019 SMLIMERLMISSDAFDVDVCNVCGRLAYSSW------CHNCRSSASVSTISMPYACKLLF 1072
Query: 236 QELQSMNVVPRLKL 195
QEL SMN+VPRLKL
Sbjct: 1073 QELTSMNIVPRLKL 1086
[82][TOP]
>UniRef100_A8NJT3 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130
RepID=A8NJT3_COPC7
Length = 1140
Score = 189 bits (481), Expect = 1e-46
Identities = 89/137 (64%), Positives = 107/137 (78%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y++ GPIYYQKLKHMV+DKMHAR GPR +TRQPTEG+S+ GGLR+GEMERDCLI YGA
Sbjct: 1010 YVYFGPIYYQKLKHMVMDKMHARARGPRATLTRQPTEGRSREGGLRLGEMERDCLIGYGA 1069
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ L+ ERLMISSD FEV C+ CGL+GY + CT CK+ +AT+ +PYA KLLF
Sbjct: 1070 TQLLLERLMISSDKFEVGACQECGLMGYNGW------CTYCKSSKKMATLTIPYAAKLLF 1123
Query: 236 QELQSMNVVPRLKLTEA 186
QEL +MNVVPRL L +A
Sbjct: 1124 QELMAMNVVPRLVLDDA 1140
[83][TOP]
>UniRef100_Q6CEE6 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CEE6_YARLI
Length = 1169
Score = 189 bits (480), Expect = 1e-46
Identities = 90/136 (66%), Positives = 106/136 (77%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMV+DKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDC+IAYGA
Sbjct: 1038 YIFFGPIYYQKLKHMVMDKMHARPRGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGA 1097
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM SSD FE VC+ CGLLGY + C +C+ ++ M LPYA KLLF
Sbjct: 1098 SQLLLERLMYSSDAFEADVCQKCGLLGYQGW------CNSCQTTAHVVKMTLPYAAKLLF 1151
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMN+ PRLKL E
Sbjct: 1152 QELVSMNIAPRLKLKE 1167
[84][TOP]
>UniRef100_Q10233 DNA-directed RNA polymerase III subunit RPC2 n=1
Tax=Schizosaccharomyces pombe RepID=RPC2_SCHPO
Length = 1165
Score = 189 bits (479), Expect = 2e-46
Identities = 91/136 (66%), Positives = 107/136 (78%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIFMGPIYYQKLKHMV+DKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYGA
Sbjct: 1032 YIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGA 1091
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD +V VC CGLLGY K C +C++ + M +PYA KLLF
Sbjct: 1092 SQLLLERLMISSDACDVDVCGQCGLLGY------KGWCNSCQSTREVVKMTIPYAAKLLF 1145
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMN+VPRL L +
Sbjct: 1146 QELLSMNIVPRLALED 1161
[85][TOP]
>UniRef100_B7FVD4 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7FVD4_PHATR
Length = 1211
Score = 188 bits (477), Expect = 3e-46
Identities = 89/136 (65%), Positives = 107/136 (78%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GP++YQKLKHMVLDK HAR GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1081 YIFSGPVFYQKLKHMVLDKAHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGV 1140
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S LI ERLM SSD F VC CGLL Y + C C++G+ +A ++LPYACKLLF
Sbjct: 1141 SNLIMERLMHSSDAFSANVCLTCGLLQYEGW------CQYCRSGEKVADIRLPYACKLLF 1194
Query: 236 QELQSMNVVPRLKLTE 189
QELQSMNV+PRL+L +
Sbjct: 1195 QELQSMNVLPRLRLQD 1210
[86][TOP]
>UniRef100_C5KAB2 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5KAB2_9ALVE
Length = 1140
Score = 188 bits (477), Expect = 3e-46
Identities = 88/134 (65%), Positives = 106/134 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF+GPIYYQKLKHMV+DK+HAR +GP +TRQPTEG++K+GGLR+GEMERDCL+AYGA
Sbjct: 1009 YIFVGPIYYQKLKHMVMDKIHARSTGPVNQLTRQPTEGRAKDGGLRLGEMERDCLVAYGA 1068
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD F VCR CGLL Y N C C +NI +++PYACKLLF
Sbjct: 1069 SNLLLERLMLSSDVFTASVCRRCGLLSYQN-----GTCKLCGTSENIVDIRMPYACKLLF 1123
Query: 236 QELQSMNVVPRLKL 195
QELQ+MNV PRLK+
Sbjct: 1124 QELQAMNVCPRLKV 1137
[87][TOP]
>UniRef100_C5K7V0 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5K7V0_9ALVE
Length = 1159
Score = 188 bits (477), Expect = 3e-46
Identities = 88/134 (65%), Positives = 106/134 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF+GPIYYQKLKHMV+DK+HAR +GP +TRQPTEG++K+GGLR+GEMERDCL+AYGA
Sbjct: 1028 YIFVGPIYYQKLKHMVMDKIHARSTGPVNQLTRQPTEGRAKDGGLRLGEMERDCLVAYGA 1087
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD F VCR CGLL Y N C C +NI +++PYACKLLF
Sbjct: 1088 SNLLLERLMLSSDVFTASVCRRCGLLSYQN-----GTCKLCGTSENIVDIRMPYACKLLF 1142
Query: 236 QELQSMNVVPRLKL 195
QELQ+MNV PRLK+
Sbjct: 1143 QELQAMNVCPRLKV 1156
[88][TOP]
>UniRef100_A9V2W9 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9V2W9_MONBE
Length = 1097
Score = 187 bits (476), Expect = 4e-46
Identities = 88/134 (65%), Positives = 106/134 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIFMGP++YQKLKHMV+DKMHAR GP ++TRQPTEG+++ GGLR+GEMERDCLI +G+
Sbjct: 965 YIFMGPVFYQKLKHMVMDKMHARSQGPMTLLTRQPTEGRAREGGLRLGEMERDCLIGHGS 1024
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SML+ ERLMISSD FEV C CGLLG + C CK+ I+ ++LPYACKLLF
Sbjct: 1025 SMLLLERLMISSDAFEVHACSQCGLLGSAGW------CQYCKSSRGISKLQLPYACKLLF 1078
Query: 236 QELQSMNVVPRLKL 195
QELQSMN+VPRL L
Sbjct: 1079 QELQSMNIVPRLTL 1092
[89][TOP]
>UniRef100_B0D7Q0 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0D7Q0_LACBS
Length = 1142
Score = 187 bits (475), Expect = 5e-46
Identities = 88/137 (64%), Positives = 105/137 (76%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y++ GPIYYQKLKHMV+DKMHAR GPR +TRQPTEG+S+ GGLR+GEMERDCLI YGA
Sbjct: 1012 YVYFGPIYYQKLKHMVMDKMHARARGPRATLTRQPTEGRSREGGLRLGEMERDCLIGYGA 1071
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ L+ ERLMISSD FEV C CGL+GY + CT CK+ +A + +PYA KLLF
Sbjct: 1072 TQLLLERLMISSDKFEVNACEECGLMGYNGW------CTYCKSSKKMAQLTIPYAAKLLF 1125
Query: 236 QELQSMNVVPRLKLTEA 186
QEL +MNVVPRL L +A
Sbjct: 1126 QELMAMNVVPRLILDDA 1142
[90][TOP]
>UniRef100_UPI000051A146 PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6
kDa polypeptide (RNA polymerase III subunit 2) (RPC2)
isoform 1 n=1 Tax=Apis mellifera RepID=UPI000051A146
Length = 1134
Score = 187 bits (474), Expect = 7e-46
Identities = 85/134 (63%), Positives = 106/134 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMV DKMHAR GPR ++TRQPT G++K GGLR+GEMERDCLI YGA
Sbjct: 1002 YIYSGPVYYQKLKHMVQDKMHARARGPRAVLTRQPTGGRAKEGGLRLGEMERDCLIGYGA 1061
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SM++ ERLMISSD F++ VC CGL+ Y + C +C++ ++T+ +PYACKLLF
Sbjct: 1062 SMMLIERLMISSDAFDIDVCNKCGLMAYSGW------CHSCRSSSCVSTISMPYACKLLF 1115
Query: 236 QELQSMNVVPRLKL 195
QELQSMN+VPRL L
Sbjct: 1116 QELQSMNIVPRLTL 1129
[91][TOP]
>UniRef100_B7Q0E7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
RepID=B7Q0E7_IXOSC
Length = 1141
Score = 186 bits (472), Expect = 1e-45
Identities = 85/134 (63%), Positives = 109/134 (81%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GPIYYQKLKHMV+DK+HAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI +GA
Sbjct: 1009 YIYFGPIYYQKLKHMVMDKVHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGHGA 1068
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S+L+ ERLM+SSD +V VCR CGLLGY + C C++ +A++++PYACKLLF
Sbjct: 1069 SLLLLERLMLSSDACQVDVCRGCGLLGYSRW------CHFCRSSRTMASLRVPYACKLLF 1122
Query: 236 QELQSMNVVPRLKL 195
QEL SMN++PRL L
Sbjct: 1123 QELLSMNIIPRLDL 1136
[92][TOP]
>UniRef100_B4P5Q3 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4P5Q3_DROYA
Length = 1137
Score = 186 bits (472), Expect = 1e-45
Identities = 87/134 (64%), Positives = 107/134 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMV DKMHAR GP+ ++TRQPT+G+S+ GGLR+GEMERDCLI+YGA
Sbjct: 1007 YIYSGPVYYQKLKHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGA 1066
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI ERLMISSD FEV VCR CG L Y ++ C C++ N++ + +PYACKLLF
Sbjct: 1067 SMLIMERLMISSDAFEVDVCRTCGRLAYCSW------CHFCQSSANVSKISMPYACKLLF 1120
Query: 236 QELQSMNVVPRLKL 195
QEL SMNVVP++ L
Sbjct: 1121 QELTSMNVVPKMIL 1134
[93][TOP]
>UniRef100_B3NS93 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NS93_DROER
Length = 1137
Score = 186 bits (472), Expect = 1e-45
Identities = 87/134 (64%), Positives = 107/134 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMV DKMHAR GP+ ++TRQPT+G+S+ GGLR+GEMERDCLI+YGA
Sbjct: 1007 YIYSGPVYYQKLKHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGA 1066
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI ERLMISSD FEV VCR CG L Y ++ C C++ N++ + +PYACKLLF
Sbjct: 1067 SMLIMERLMISSDAFEVDVCRTCGRLAYCSW------CHFCQSSANVSKISMPYACKLLF 1120
Query: 236 QELQSMNVVPRLKL 195
QEL SMNVVP++ L
Sbjct: 1121 QELTSMNVVPKMIL 1134
[94][TOP]
>UniRef100_B3LB54 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3LB54_PLAKH
Length = 1401
Score = 186 bits (471), Expect = 2e-45
Identities = 88/136 (64%), Positives = 106/136 (77%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIFMGPIYYQKLKHMV DK+HAR GPR ++TRQPTEG+SK GGLR+GEMERDCLIAYG
Sbjct: 1271 YIFMGPIYYQKLKHMVQDKIHARARGPRQLLTRQPTEGRSKEGGLRLGEMERDCLIAYGV 1330
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD +V +C CG++GY Y CT C+ D A +K+PYACKLLF
Sbjct: 1331 SNLLLERLMLSSDVCDVYICEDCGMMGYDTY------CTFCQKCDKNALVKMPYACKLLF 1384
Query: 236 QELQSMNVVPRLKLTE 189
QELQ+MNV P++ + E
Sbjct: 1385 QELQTMNVFPKIVVKE 1400
[95][TOP]
>UniRef100_A5K0G6 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5K0G6_PLAVI
Length = 1427
Score = 186 bits (471), Expect = 2e-45
Identities = 88/136 (64%), Positives = 106/136 (77%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIFMGPIYYQKLKHMV DK+HAR GPR ++TRQPTEG+SK GGLR+GEMERDCLIAYG
Sbjct: 1297 YIFMGPIYYQKLKHMVQDKIHARARGPRQLLTRQPTEGRSKEGGLRLGEMERDCLIAYGV 1356
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD +V +C CG++GY Y CT C+ D A +K+PYACKLLF
Sbjct: 1357 SNLLLERLMLSSDVCDVYICEDCGMMGYDTY------CTFCQKCDKNALVKMPYACKLLF 1410
Query: 236 QELQSMNVVPRLKLTE 189
QELQ+MNV P++ + E
Sbjct: 1411 QELQTMNVFPKIVVKE 1426
[96][TOP]
>UniRef100_Q5KC33 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KC33_CRYNE
Length = 1129
Score = 186 bits (471), Expect = 2e-45
Identities = 85/136 (62%), Positives = 106/136 (77%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y++ GPIYYQKLKHMV+DKMHAR +GPR +TRQPTEG+SK+GGLR+GEMERDCLI YGA
Sbjct: 998 YVYFGPIYYQKLKHMVMDKMHARPTGPRANLTRQPTEGRSKDGGLRLGEMERDCLIGYGA 1057
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ L+ ERLMISSD FE QVC +CG+LGY N+ C CK+G + + +PYA KLL
Sbjct: 1058 TQLLLERLMISSDAFETQVCESCGMLGYNNW------CPKCKSGKGVVGLTIPYAAKLLI 1111
Query: 236 QELQSMNVVPRLKLTE 189
QEL MN++P+L L +
Sbjct: 1112 QELMGMNIMPKLCLED 1127
[97][TOP]
>UniRef100_B4QC69 DNA-directed RNA polymerase n=2 Tax=melanogaster subgroup
RepID=B4QC69_DROSI
Length = 1137
Score = 185 bits (470), Expect = 2e-45
Identities = 86/134 (64%), Positives = 107/134 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMV DKMHAR GP+ ++TRQPT+G+S+ GGLR+GEMERDCLI+YGA
Sbjct: 1007 YIYSGPVYYQKLKHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGA 1066
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI ERLMISSD FEV VCR CG + Y ++ C C++ N++ + +PYACKLLF
Sbjct: 1067 SMLIMERLMISSDAFEVDVCRTCGRMAYCSW------CHFCQSSANVSKISMPYACKLLF 1120
Query: 236 QELQSMNVVPRLKL 195
QEL SMNVVP++ L
Sbjct: 1121 QELTSMNVVPKMIL 1134
[98][TOP]
>UniRef100_Q6E6F3 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae
RepID=Q6E6F3_ANTLO
Length = 1014
Score = 185 bits (470), Expect = 2e-45
Identities = 86/134 (64%), Positives = 104/134 (77%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GP+YYQ+LKHMV DKMHAR GPR M+TRQPTEGKS+ GGLR+GEMERDCLI YGA
Sbjct: 886 YVFFGPVYYQRLKHMVADKMHARSRGPRAMLTRQPTEGKSREGGLRLGEMERDCLIGYGA 945
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S ++ ERLMISSD F +C CG++ Y N +CT CK GD + + +PYACKLLF
Sbjct: 946 SAILCERLMISSDVFRAYICHRCGIIVYKN------MCTLCKRGDPV-PVDMPYACKLLF 998
Query: 236 QELQSMNVVPRLKL 195
QEL SMN++PR+KL
Sbjct: 999 QELMSMNILPRIKL 1012
[99][TOP]
>UniRef100_P25167 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Drosophila
melanogaster RepID=RPC2_DROME
Length = 1137
Score = 185 bits (470), Expect = 2e-45
Identities = 86/134 (64%), Positives = 107/134 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMV DKMHAR GP+ ++TRQPT+G+S+ GGLR+GEMERDCLI+YGA
Sbjct: 1007 YIYSGPVYYQKLKHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGA 1066
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI ERLMISSD FEV VCR CG + Y ++ C C++ N++ + +PYACKLLF
Sbjct: 1067 SMLIMERLMISSDAFEVDVCRTCGRMAYCSW------CHFCQSSANVSKISMPYACKLLF 1120
Query: 236 QELQSMNVVPRLKL 195
QEL SMNVVP++ L
Sbjct: 1121 QELTSMNVVPKMIL 1134
[100][TOP]
>UniRef100_B4MR22 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4MR22_DROWI
Length = 999
Score = 185 bits (469), Expect = 3e-45
Identities = 87/136 (63%), Positives = 108/136 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMV DKMHAR GP+ ++TRQPT+G+S+ GGLR+GEMERDCLI+YGA
Sbjct: 869 YIYSGPVYYQKLKHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGA 928
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI ERLMISSD FEV VCR CG L Y ++ C C++ +++ + +PYACKLLF
Sbjct: 929 SMLIMERLMISSDAFEVDVCRICGRLAYCSW------CHFCQSSAHVSKISMPYACKLLF 982
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNVVP+L L +
Sbjct: 983 QELTSMNVVPKLILED 998
[101][TOP]
>UniRef100_B4LKV4 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4LKV4_DROVI
Length = 1137
Score = 185 bits (469), Expect = 3e-45
Identities = 87/134 (64%), Positives = 107/134 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMV DKMHAR GP+ ++TRQPT+G+S+ GGLR+GEMERDCLI+YGA
Sbjct: 1007 YIYSGPVYYQKLKHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGA 1066
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI ERLMISSD FEV VCR CG L Y ++ C C++ +++ + +PYACKLLF
Sbjct: 1067 SMLIMERLMISSDAFEVDVCRTCGRLAYCSW------CHFCQSSAHVSKISMPYACKLLF 1120
Query: 236 QELQSMNVVPRLKL 195
QEL SMNVVP+L L
Sbjct: 1121 QELTSMNVVPKLIL 1134
[102][TOP]
>UniRef100_B4KPU7 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4KPU7_DROMO
Length = 1136
Score = 185 bits (469), Expect = 3e-45
Identities = 87/134 (64%), Positives = 107/134 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMV DKMHAR GP+ ++TRQPT+G+S+ GGLR+GEMERDCLI+YGA
Sbjct: 1006 YIYSGPVYYQKLKHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGA 1065
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI ERLMISSD FEV VCR CG L Y ++ C C++ +++ + +PYACKLLF
Sbjct: 1066 SMLIMERLMISSDAFEVDVCRTCGRLAYCSW------CHFCQSSAHVSKISMPYACKLLF 1119
Query: 236 QELQSMNVVPRLKL 195
QEL SMNVVP+L L
Sbjct: 1120 QELTSMNVVPKLIL 1133
[103][TOP]
>UniRef100_B4J5G6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4J5G6_DROGR
Length = 1137
Score = 185 bits (469), Expect = 3e-45
Identities = 87/134 (64%), Positives = 107/134 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMV DKMHAR GP+ ++TRQPT+G+S+ GGLR+GEMERDCLI+YGA
Sbjct: 1007 YIYSGPVYYQKLKHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGA 1066
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI ERLMISSD FEV VCR CG L Y ++ C C++ +++ + +PYACKLLF
Sbjct: 1067 SMLIMERLMISSDAFEVDVCRTCGRLAYCSW------CHFCQSSAHVSKISMPYACKLLF 1120
Query: 236 QELQSMNVVPRLKL 195
QEL SMNVVP+L L
Sbjct: 1121 QELTSMNVVPKLIL 1134
[104][TOP]
>UniRef100_A7EEL3 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980
UF-70 RepID=A7EEL3_SCLS1
Length = 1230
Score = 185 bits (469), Expect = 3e-45
Identities = 86/136 (63%), Positives = 106/136 (77%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYGA
Sbjct: 1091 YVFFGPIYYQKLKHMVQDKMHSRSRGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGA 1150
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD EV +C CGL+GY + C TCK+ ++TM +PYA KLL
Sbjct: 1151 SQLLLERLMLSSDAHEVDICETCGLMGYSGW------CQTCKSSKGVSTMTMPYAAKLLV 1204
Query: 236 QELQSMNVVPRLKLTE 189
QE+ SMNV+ RLKL +
Sbjct: 1205 QEMLSMNVLVRLKLED 1220
[105][TOP]
>UniRef100_Q28ZV6 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q28ZV6_DROPS
Length = 1137
Score = 184 bits (468), Expect = 4e-45
Identities = 86/136 (63%), Positives = 108/136 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMV DKMHAR GP+ ++TRQPT+G+S+ GGLR+GEMERDCLI+YGA
Sbjct: 1007 YIYSGPVYYQKLKHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGA 1066
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI ERLMISSD FEV VCR CG L Y ++ C C++ +++ + +PYACKLLF
Sbjct: 1067 SMLIMERLMISSDAFEVDVCRTCGRLAYCSW------CHFCQSSAHVSKISMPYACKLLF 1120
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNVVP++ L +
Sbjct: 1121 QELTSMNVVPKMILED 1136
[106][TOP]
>UniRef100_B4GGQ4 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4GGQ4_DROPE
Length = 1137
Score = 184 bits (468), Expect = 4e-45
Identities = 86/136 (63%), Positives = 108/136 (79%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMV DKMHAR GP+ ++TRQPT+G+S+ GGLR+GEMERDCLI+YGA
Sbjct: 1007 YIYSGPVYYQKLKHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGA 1066
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI ERLMISSD FEV VCR CG L Y ++ C C++ +++ + +PYACKLLF
Sbjct: 1067 SMLIMERLMISSDAFEVDVCRTCGRLAYCSW------CHFCQSSAHVSKISMPYACKLLF 1120
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNVVP++ L +
Sbjct: 1121 QELTSMNVVPKMILED 1136
[107][TOP]
>UniRef100_UPI00017918AB PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
(RNA polymerase III subunit C2) (DNA-directed RNA
polymerase III subunit B) (DNA-directed RNA polymerase
III 127.6 kDa polypeptide) (C128) n=1 Tax=Acyrthosiphon
pisum RepID=UPI00017918AB
Length = 1112
Score = 184 bits (466), Expect = 6e-45
Identities = 83/134 (61%), Positives = 108/134 (80%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP++YQ+LKHMV DK+HAR GPRV++TRQPTEG+SK+GGLR+GEMERDCLIAYGA
Sbjct: 980 YIYSGPVFYQRLKHMVADKIHARSRGPRVLLTRQPTEGRSKDGGLRMGEMERDCLIAYGA 1039
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI ERLM+SSD E+ VC+ CGL Y + C C+ +++ +K+PYACKLLF
Sbjct: 1040 SMLIIERLMLSSDVVEMDVCKLCGLFSYSGW------CHMCQKSNSVCRIKMPYACKLLF 1093
Query: 236 QELQSMNVVPRLKL 195
QELQ+M++VP++ L
Sbjct: 1094 QELQAMSIVPKISL 1107
[108][TOP]
>UniRef100_A6RTM2 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10
RepID=A6RTM2_BOTFB
Length = 450
Score = 184 bits (466), Expect = 6e-45
Identities = 85/136 (62%), Positives = 106/136 (77%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYGA
Sbjct: 311 YVFFGPIYYQKLKHMVQDKMHSRSRGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGA 370
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD +V +C CGL+GY + C TCK+ ++TM +PYA KLL
Sbjct: 371 SQLLLERLMLSSDAHQVDICETCGLMGYSGW------CQTCKSSKGVSTMTMPYAAKLLV 424
Query: 236 QELQSMNVVPRLKLTE 189
QE+ SMNV+ RLKL +
Sbjct: 425 QEMLSMNVLVRLKLED 440
[109][TOP]
>UniRef100_B3MH37 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MH37_DROAN
Length = 1137
Score = 183 bits (465), Expect = 8e-45
Identities = 86/136 (63%), Positives = 107/136 (78%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMV DKMHAR GP+ ++TRQPT+G+S+ GGLR+GEMERDCLI+YGA
Sbjct: 1007 YIYSGPVYYQKLKHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGA 1066
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SMLI ERLMISSD FEV VCR CG L Y ++ C C++ ++ + +PYACKLLF
Sbjct: 1067 SMLIMERLMISSDAFEVDVCRTCGRLAYCSW------CHFCQSSAYVSKISMPYACKLLF 1120
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNVVP++ L +
Sbjct: 1121 QELTSMNVVPKMILED 1136
[110][TOP]
>UniRef100_A8PVW9 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8PVW9_MALGO
Length = 1131
Score = 183 bits (465), Expect = 8e-45
Identities = 86/137 (62%), Positives = 104/137 (75%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y++ GPIYYQKLKHMV+DKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1000 YVYFGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1059
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ L+ ERLM+SSD F V C CGLLGY Y C CK+ ++ + +PYA KLLF
Sbjct: 1060 TQLLLERLMVSSDAFVVNACEECGLLGYNGY------CGYCKSSKHVVKLTVPYATKLLF 1113
Query: 236 QELQSMNVVPRLKLTEA 186
QEL +M VVPRL L EA
Sbjct: 1114 QELMAMQVVPRLVLEEA 1130
[111][TOP]
>UniRef100_C1HBD0 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1HBD0_PARBA
Length = 1205
Score = 183 bits (464), Expect = 1e-44
Identities = 87/136 (63%), Positives = 104/136 (76%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+FMGPIYYQKLKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1068 YVFMGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1127
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD +EV VC +CG +GY + C CK+ + M +PYA KLL
Sbjct: 1128 SQLLLERLMISSDQYEVDVCESCGFMGYSGW------CQRCKSSRGVVKMIIPYAAKLLV 1181
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNVV RLKL +
Sbjct: 1182 QELFSMNVVARLKLAD 1197
[112][TOP]
>UniRef100_Q7RNH0 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RNH0_PLAYO
Length = 1323
Score = 182 bits (462), Expect = 2e-44
Identities = 86/136 (63%), Positives = 104/136 (76%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIFMGPIYYQKLKHMV DK+HAR GPR ++TRQPTEG+SK GGLR+GEMERDCLIAYG
Sbjct: 1193 YIFMGPIYYQKLKHMVQDKIHARSRGPRQLLTRQPTEGRSKEGGLRLGEMERDCLIAYGV 1252
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD + +C CG++GY + CT CK D +K+PYACKLLF
Sbjct: 1253 SNLLLERLMLSSDVCDAYICEDCGMMGY------DSCCTFCKKYDKNVVVKMPYACKLLF 1306
Query: 236 QELQSMNVVPRLKLTE 189
QELQ+MNV P++ + E
Sbjct: 1307 QELQTMNVFPKIIVKE 1322
[113][TOP]
>UniRef100_Q8I5X9 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=Q8I5X9_PLAF7
Length = 1450
Score = 182 bits (461), Expect = 2e-44
Identities = 87/136 (63%), Positives = 104/136 (76%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIFMGPIYYQKLKHMV DK+HAR GPR ++TRQPTEG+SK GGLR+GEMERDCLIAYG
Sbjct: 1320 YIFMGPIYYQKLKHMVQDKIHARARGPRQLLTRQPTEGRSKEGGLRLGEMERDCLIAYGV 1379
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD V +C CG++GY Y CT CK D +++PYACKLLF
Sbjct: 1380 SNLLLERLMLSSDVCNVYICEDCGMMGYDLY------CTFCKKCDKNIVIQMPYACKLLF 1433
Query: 236 QELQSMNVVPRLKLTE 189
QELQ+MNV P++ + E
Sbjct: 1434 QELQTMNVFPKIIVKE 1449
[114][TOP]
>UniRef100_Q4Z2F1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Plasmodium berghei
RepID=Q4Z2F1_PLABE
Length = 446
Score = 181 bits (460), Expect = 3e-44
Identities = 86/136 (63%), Positives = 103/136 (75%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIFMGPIYYQKLKHMV DK+HAR GPR ++TRQPTEG+SK GGLR+GEMERDCLIAYG
Sbjct: 316 YIFMGPIYYQKLKHMVQDKIHARSRGPRQLLTRQPTEGRSKEGGLRLGEMERDCLIAYGV 375
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD + +C CG++GY CT CK D +K+PYACKLLF
Sbjct: 376 SNLLLERLMLSSDVCDTYICEDCGMMGY------DLCCTFCKKYDKNVVVKMPYACKLLF 429
Query: 236 QELQSMNVVPRLKLTE 189
QELQ+MNV P++ + E
Sbjct: 430 QELQTMNVFPKIIVKE 445
[115][TOP]
>UniRef100_C5JTE0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis SLH14081
RepID=C5JTE0_AJEDS
Length = 1204
Score = 181 bits (460), Expect = 3e-44
Identities = 87/136 (63%), Positives = 102/136 (75%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+FMGPIYYQKLKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1067 YVFMGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1126
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD EV VC +CG +GY + C CK + M +PYA KLL
Sbjct: 1127 SQLLLERLMISSDRHEVDVCESCGFMGYLGW------CQRCKTSRGVVKMVIPYAAKLLV 1180
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNVV RLKL +
Sbjct: 1181 QELFSMNVVARLKLAD 1196
[116][TOP]
>UniRef100_C5GKN6 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3
RepID=C5GKN6_AJEDR
Length = 1228
Score = 181 bits (460), Expect = 3e-44
Identities = 87/136 (63%), Positives = 102/136 (75%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+FMGPIYYQKLKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1091 YVFMGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1150
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD EV VC +CG +GY + C CK + M +PYA KLL
Sbjct: 1151 SQLLLERLMISSDRHEVDVCESCGFMGYLGW------CQRCKTSRGVVKMVIPYAAKLLV 1204
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNVV RLKL +
Sbjct: 1205 QELFSMNVVARLKLAD 1220
[117][TOP]
>UniRef100_C4M3E3 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS
RepID=C4M3E3_ENTHI
Length = 1122
Score = 181 bits (459), Expect = 4e-44
Identities = 85/134 (63%), Positives = 105/134 (78%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF+GP+YYQKLKHMVLDKMHAR GP+ +TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 992 YIFIGPVYYQKLKHMVLDKMHARARGPKSSLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1051
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ L+ ERLM SSD F+V VC+ CGL+G+ Y C C++ + +PYACKLLF
Sbjct: 1052 TNLLLERLMYSSDAFKVCVCKKCGLIGHSGY------CKFCESSLYCTNVTMPYACKLLF 1105
Query: 236 QELQSMNVVPRLKL 195
QE+QSMNVVPRL +
Sbjct: 1106 QEMQSMNVVPRLSI 1119
[118][TOP]
>UniRef100_A8WJV6 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae AF16
RepID=A8WJV6_CAEBR
Length = 1160
Score = 181 bits (459), Expect = 4e-44
Identities = 91/157 (57%), Positives = 108/157 (68%), Gaps = 23/157 (14%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GPIYYQKLKHMVLDKMHAR GPR +TRQPTEG+S+ GGLR+GEMERDCLIAYGA
Sbjct: 1005 YIYFGPIYYQKLKHMVLDKMHARARGPRAALTRQPTEGRSREGGLRLGEMERDCLIAYGA 1064
Query: 416 SMLIYERLMISSDPFE-----------------------VQVCRACGLLGYYNYKLKKAV 306
SML+ ERLM+SSD F+ V VC CG++G K
Sbjct: 1065 SMLLIERLMVSSDEFKVLFRSFVPLIPIEVFFVRRCFQCVDVCTGCGVIG------SKGW 1118
Query: 305 CTTCKNGDNIATMKLPYACKLLFQELQSMNVVPRLKL 195
C C++ ++A +K+PYACKLLFQELQSMN+VPRL L
Sbjct: 1119 CQKCRSSKSMANIKIPYACKLLFQELQSMNIVPRLDL 1155
[119][TOP]
>UniRef100_Q2URF4 DNA-directed RNA polymerase n=1 Tax=Aspergillus oryzae
RepID=Q2URF4_ASPOR
Length = 1180
Score = 181 bits (459), Expect = 4e-44
Identities = 85/136 (62%), Positives = 102/136 (75%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1043 YVFTGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1102
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD E+ VC CG +GY N+ C CK+ ++ M +PYA KLL
Sbjct: 1103 SQLLLERLMISSDRHEIDVCEQCGFMGYLNW------CQRCKSSRSVVKMAIPYAAKLLI 1156
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV RLKL +
Sbjct: 1157 QELMSMNVTARLKLED 1172
[120][TOP]
>UniRef100_B8MYG2 DNA-directed RNA polymerase n=1 Tax=Aspergillus flavus NRRL3357
RepID=B8MYG2_ASPFN
Length = 1218
Score = 181 bits (459), Expect = 4e-44
Identities = 85/136 (62%), Positives = 102/136 (75%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1081 YVFTGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1140
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD E+ VC CG +GY N+ C CK+ ++ M +PYA KLL
Sbjct: 1141 SQLLLERLMISSDRHEIDVCEQCGFMGYLNW------CQRCKSSRSVVKMAIPYAAKLLI 1194
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV RLKL +
Sbjct: 1195 QELMSMNVTARLKLED 1210
[121][TOP]
>UniRef100_B0XMI5 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
RepID=B0XMI5_ASPFC
Length = 1200
Score = 181 bits (459), Expect = 4e-44
Identities = 85/136 (62%), Positives = 102/136 (75%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1063 YVFTGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1122
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD E+ VC CG +GY N+ C CK+ ++ M +PYA KLL
Sbjct: 1123 SQLLLERLMISSDRHEIDVCEQCGFMGYLNW------CQRCKSSRSVVKMTIPYAAKLLI 1176
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV RLKL +
Sbjct: 1177 QELMSMNVTARLKLDD 1192
[122][TOP]
>UniRef100_A2Q8V9 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2Q8V9_ASPNC
Length = 1225
Score = 181 bits (459), Expect = 4e-44
Identities = 85/136 (62%), Positives = 102/136 (75%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1088 YVFTGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1147
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD E+ VC CG +GY N+ C CK+ ++ M +PYA KLL
Sbjct: 1148 SQLLLERLMISSDRHEIDVCEQCGFMGYLNW------CQRCKSSRSVVKMAIPYAAKLLI 1201
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV RLKL +
Sbjct: 1202 QELMSMNVTARLKLDD 1217
[123][TOP]
>UniRef100_A1D510 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D510_NEOFI
Length = 1200
Score = 181 bits (459), Expect = 4e-44
Identities = 85/136 (62%), Positives = 102/136 (75%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1063 YVFTGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1122
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD E+ VC CG +GY N+ C CK+ ++ M +PYA KLL
Sbjct: 1123 SQLLLERLMISSDRHEIDVCEQCGFMGYLNW------CQRCKSSRSVVKMTIPYAAKLLI 1176
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV RLKL +
Sbjct: 1177 QELMSMNVTARLKLDD 1192
[124][TOP]
>UniRef100_A1CS37 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CS37_ASPCL
Length = 1246
Score = 181 bits (459), Expect = 4e-44
Identities = 85/136 (62%), Positives = 102/136 (75%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1109 YVFTGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1168
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD E+ VC CG +GY N+ C CK+ ++ M +PYA KLL
Sbjct: 1169 SQLLLERLMISSDRHEIDVCEQCGFMGYLNW------CQRCKSSRSVVKMTIPYAAKLLI 1222
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV RLKL +
Sbjct: 1223 QELMSMNVTARLKLDD 1238
[125][TOP]
>UniRef100_Q0CN89 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0CN89_ASPTN
Length = 1219
Score = 181 bits (458), Expect = 5e-44
Identities = 85/136 (62%), Positives = 102/136 (75%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1082 YVFTGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1141
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD E+ VC CG +GY N+ C CK+ ++ M +PYA KLL
Sbjct: 1142 SQLLLERLMISSDRHEIDVCEKCGFMGYLNW------CQRCKSSRSVVKMVIPYAAKLLI 1195
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV RLKL +
Sbjct: 1196 QELMSMNVTARLKLED 1211
[126][TOP]
>UniRef100_A6R9I0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6R9I0_AJECN
Length = 1186
Score = 181 bits (458), Expect = 5e-44
Identities = 87/136 (63%), Positives = 101/136 (74%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+FMGPIYYQKLKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1049 YVFMGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1108
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD EV VC CG +GY + C CK + M +PYA KLL
Sbjct: 1109 SQLLLERLMISSDRHEVDVCENCGFMGYLGW------CQRCKTSRGVVKMAIPYAAKLLV 1162
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNVV RLKL +
Sbjct: 1163 QELFSMNVVARLKLAD 1178
[127][TOP]
>UniRef100_C8VU19 DNA-directed RNA polymerase III, beta subunit, putative
(AFU_orthologue; AFUA_1G02460) n=2 Tax=Emericella
nidulans RepID=C8VU19_EMENI
Length = 1225
Score = 180 bits (457), Expect = 7e-44
Identities = 86/136 (63%), Positives = 101/136 (74%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMV DKMH+R GPR +TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1088 YVFTGPIYYQKLKHMVQDKMHSRARGPRATLTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1147
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD EV VC CG +GY N+ C CK+ ++ M +PYA KLL
Sbjct: 1148 SQLLLERLMISSDRHEVDVCEQCGFMGYLNW------CQRCKSSRSVVKMVIPYAAKLLI 1201
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV RLKL +
Sbjct: 1202 QELMSMNVTARLKLED 1217
[128][TOP]
>UniRef100_C6HGH3 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HGH3_AJECH
Length = 1227
Score = 180 bits (457), Expect = 7e-44
Identities = 87/136 (63%), Positives = 101/136 (74%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+FMGPIYYQKLKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1090 YVFMGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1149
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD EV VC CG +GY + C CK + M +PYA KLL
Sbjct: 1150 SQLLLERLMISSDRHEVDVCENCGFMGYLGW------CQRCKTSRGVVKMVIPYAAKLLV 1203
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNVV RLKL +
Sbjct: 1204 QELFSMNVVARLKLAD 1219
[129][TOP]
>UniRef100_C0P0A1 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0P0A1_AJECG
Length = 1227
Score = 180 bits (457), Expect = 7e-44
Identities = 87/136 (63%), Positives = 101/136 (74%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+FMGPIYYQKLKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1090 YVFMGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1149
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD EV VC CG +GY + C CK + M +PYA KLL
Sbjct: 1150 SQLLLERLMISSDRHEVDVCENCGFMGYLGW------CQRCKTSRGVVKMVIPYAAKLLV 1203
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNVV RLKL +
Sbjct: 1204 QELFSMNVVARLKLAD 1219
[130][TOP]
>UniRef100_B6QHR9 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224
RepID=B6QHR9_PENMQ
Length = 1212
Score = 180 bits (457), Expect = 7e-44
Identities = 84/134 (62%), Positives = 101/134 (75%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+FMGPIYYQKLKHMV DKMH+R +GPR +TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1075 YVFMGPIYYQKLKHMVQDKMHSRSTGPRATLTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1134
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD EV +C CG +GY N+ C C++ + M +PYA KLL
Sbjct: 1135 SQLLLERLMLSSDKHEVDICEKCGFMGYQNW------CQRCRSSRGVVKMTIPYAAKLLI 1188
Query: 236 QELQSMNVVPRLKL 195
QEL SMNV RLKL
Sbjct: 1189 QELLSMNVTARLKL 1202
[131][TOP]
>UniRef100_UPI000186CFA7 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide,
putative n=1 Tax=Pediculus humanus corporis
RepID=UPI000186CFA7
Length = 1137
Score = 180 bits (456), Expect = 9e-44
Identities = 84/134 (62%), Positives = 105/134 (78%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y++ GP++YQ+LKHMV DK+HAR GPR ++TRQPTEG++ +GGLR+GEMERDCLIAYGA
Sbjct: 1004 YVYSGPVFYQRLKHMVQDKIHARARGPRAVLTRQPTEGRAADGGLRLGEMERDCLIAYGA 1063
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S +I ERLMISSD F+ VC CGL+ Y + C CK+ I+T+KLPYA KLLF
Sbjct: 1064 SSMISERLMISSDAFQCDVCNECGLIAYSKW------CHGCKSSKEISTIKLPYATKLLF 1117
Query: 236 QELQSMNVVPRLKL 195
QEL+SMN+VPRL L
Sbjct: 1118 QELRSMNIVPRLSL 1131
[132][TOP]
>UniRef100_UPI0000D56081 PREDICTED: similar to RNA polymerase III 128kD subunit CG8344-PA n=1
Tax=Tribolium castaneum RepID=UPI0000D56081
Length = 1122
Score = 179 bits (455), Expect = 1e-43
Identities = 82/134 (61%), Positives = 104/134 (77%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GP+YYQKLKHMV DK+HARG GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 990 YIYSGPVYYQKLKHMVQDKIHARGRGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1049
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
SM++ ERLM+SSD EV VC CG LGY + C +CK+ ++++ +PYACKLL
Sbjct: 1050 SMMLIERLMVSSDQCEVDVCNLCGRLGYCGW------CNSCKSSREVSSITMPYACKLLL 1103
Query: 236 QELQSMNVVPRLKL 195
ELQ+MN+ RL L
Sbjct: 1104 TELQAMNITARLTL 1117
[133][TOP]
>UniRef100_B6HTA4 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6HTA4_PENCW
Length = 1208
Score = 179 bits (455), Expect = 1e-43
Identities = 85/136 (62%), Positives = 100/136 (73%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMV DKMH+R GP +TRQPTEG+S+NGGLR+GEMERDCLIAYG
Sbjct: 1071 YVFTGPIYYQKLKHMVQDKMHSRAKGPTATLTRQPTEGRSRNGGLRLGEMERDCLIAYGT 1130
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD EV +C CG +GY N+ C CK+ ++ M +PYA KLL
Sbjct: 1131 SQLLLERLMISSDRHEVDICEKCGFMGYLNW------CPGCKSSRSVVKMVIPYAAKLLI 1184
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV RLKL +
Sbjct: 1185 QELMSMNVTARLKLDD 1200
[134][TOP]
>UniRef100_Q9P6E7 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q9P6E7_NEUCR
Length = 1155
Score = 179 bits (454), Expect = 1e-43
Identities = 86/136 (63%), Positives = 104/136 (76%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YI+ GPI+YQ+LKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYGA
Sbjct: 1020 YIYNGPIFYQRLKHMVQDKMHSRSRGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGA 1079
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD E+ VC+ CGL GY Y C CK+ N+ M +PYACKLL
Sbjct: 1080 SQLLLERLMISSDGTELDVCQECGLFGYKGY------CNACKSTRNVTQMTMPYACKLLV 1133
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV +LKL +
Sbjct: 1134 QELISMNVGVKLKLED 1149
[135][TOP]
>UniRef100_Q4MYU5 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4MYU5_THEPA
Length = 1244
Score = 178 bits (452), Expect = 3e-43
Identities = 84/131 (64%), Positives = 107/131 (81%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GPIYYQ+LKHMV DK+HARG GPR +TRQPTEG+S++GGLR+GEMERDCLIAYG+S
Sbjct: 1116 IFIGPIYYQRLKHMVTDKIHARGRGPRQPITRQPTEGRSRDGGLRLGEMERDCLIAYGSS 1175
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
L+ ERLM+SSD F ++VC +CG +GY N+ C C+N +++A + LPYACKLLFQ
Sbjct: 1176 NLLVERLMLSSDVFNIEVCSSCGFMGYNNF------CKFCQN-NSLAQVSLPYACKLLFQ 1228
Query: 233 ELQSMNVVPRL 201
ELQ+MN+ P L
Sbjct: 1229 ELQAMNIRPSL 1239
[136][TOP]
>UniRef100_B8MJE1 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500
RepID=B8MJE1_TALSN
Length = 1212
Score = 178 bits (452), Expect = 3e-43
Identities = 83/136 (61%), Positives = 101/136 (74%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMV DKMH+R +GPR +TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1075 YVFTGPIYYQKLKHMVQDKMHSRSTGPRATLTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1134
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD EV +C CG +GY N+ C C++ + M +PYA KLL
Sbjct: 1135 SQLLLERLMLSSDKHEVDICEKCGFMGYQNW------CQRCRSSRGVVKMTIPYAAKLLI 1188
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV RLKL +
Sbjct: 1189 QELLSMNVTARLKLED 1204
[137][TOP]
>UniRef100_Q4UB41 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4UB41_THEAN
Length = 1244
Score = 178 bits (451), Expect = 3e-43
Identities = 83/131 (63%), Positives = 107/131 (81%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GPIYYQ+LKHMV DK+HARG GPR +TRQPTEG+S++GGLR+GEMERDCLIAYG+S
Sbjct: 1116 IFIGPIYYQRLKHMVTDKIHARGRGPRQPITRQPTEGRSRDGGLRLGEMERDCLIAYGSS 1175
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
L+ ERLM+SSD F +++C +CG +GY N+ C C+N +++A + LPYACKLLFQ
Sbjct: 1176 NLLIERLMLSSDVFNIEICTSCGFMGYNNF------CKFCQN-NSLAQVSLPYACKLLFQ 1228
Query: 233 ELQSMNVVPRL 201
ELQ+MN+ P L
Sbjct: 1229 ELQAMNIRPSL 1239
[138][TOP]
>UniRef100_Q1DTS7 DNA-directed RNA polymerase n=2 Tax=Coccidioides RepID=Q1DTS7_COCIM
Length = 1233
Score = 178 bits (451), Expect = 3e-43
Identities = 86/136 (63%), Positives = 100/136 (73%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1096 YVFTGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1155
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD EV VC CG +GY + C CK + M +PYA KLL
Sbjct: 1156 SQLLLERLMISSDRHEVDVCENCGFMGYLGW------CQRCKTSRGVVKMVIPYAAKLLV 1209
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNVV RLKL +
Sbjct: 1210 QELFSMNVVARLKLAD 1225
[139][TOP]
>UniRef100_A7AM79 DNA-directed RNA polymerase, beta subunit, putative n=1 Tax=Babesia
bovis RepID=A7AM79_BABBO
Length = 1171
Score = 177 bits (448), Expect = 7e-43
Identities = 85/136 (62%), Positives = 103/136 (75%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF GP+YYQKLKHMV DK+HAR GPR +TRQPTEG+SK+GGLR+GEMERDCLIAYGAS
Sbjct: 1039 IFTGPMYYQKLKHMVSDKIHARAVGPRQSLTRQPTEGRSKDGGLRLGEMERDCLIAYGAS 1098
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
L+ ERLM+SSD F++ VC CG +GY + C CK AT+ +PYACKLLFQ
Sbjct: 1099 GLLVERLMLSSDVFQMDVCHQCGFIGYDGW------CAYCKQRGQTATVAIPYACKLLFQ 1152
Query: 233 ELQSMNVVPRLKLTEA 186
ELQ+MN+ P + L E+
Sbjct: 1153 ELQAMNIRPNVILKES 1168
[140][TOP]
>UniRef100_Q8SQY8 DNA-directed RNA polymerase n=1 Tax=Encephalitozoon cuniculi
RepID=Q8SQY8_ENCCU
Length = 1110
Score = 177 bits (448), Expect = 7e-43
Identities = 84/134 (62%), Positives = 102/134 (76%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GP++YQ+LKHMV DK+H R GPR ++TRQPTEG+SK+GGL++GEMERDCLI YGA
Sbjct: 983 YIFFGPVFYQRLKHMVADKIHMRARGPRAILTRQPTEGRSKDGGLKLGEMERDCLIGYGA 1042
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S LI ERLM SSD FE VCR+CG+L + K C CK G +K+PYACKLLF
Sbjct: 1043 SSLITERLMTSSDVFEAYVCRSCGVLAF------KGCCVACK-GTKPVKVKMPYACKLLF 1095
Query: 236 QELQSMNVVPRLKL 195
QEL SMN++PRL +
Sbjct: 1096 QELMSMNILPRLHI 1109
[141][TOP]
>UniRef100_C4JMP0 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JMP0_UNCRE
Length = 1202
Score = 177 bits (448), Expect = 7e-43
Identities = 85/136 (62%), Positives = 99/136 (72%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1065 YVFTGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1124
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD EV VC CG +GY + C CK + M +PYA KLL
Sbjct: 1125 SQLLLERLMISSDRHEVDVCENCGFMGYLGW------CQRCKTSRGVVKMAIPYAAKLLV 1178
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNVV R KL +
Sbjct: 1179 QELFSMNVVARFKLAD 1194
[142][TOP]
>UniRef100_UPI000023E0C8 hypothetical protein FG00843.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023E0C8
Length = 1157
Score = 176 bits (446), Expect = 1e-42
Identities = 84/136 (61%), Positives = 103/136 (75%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQ+LKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYGA
Sbjct: 1022 YVFNGPIYYQRLKHMVQDKMHSRSRGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGA 1081
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD E+ +C+ CGL GY Y C TCK+ + M +PYA KLL
Sbjct: 1082 SQLLLERLMISSDGTEIDICQQCGLFGYKGY------CHTCKSTREVTKMTMPYAAKLLV 1135
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV RL++ +
Sbjct: 1136 QELISMNVGVRLQMDD 1151
[143][TOP]
>UniRef100_C5FVS4 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FVS4_NANOT
Length = 1211
Score = 176 bits (446), Expect = 1e-42
Identities = 85/136 (62%), Positives = 99/136 (72%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQKLKHMV DKMH+R GPR +TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1074 YVFTGPIYYQKLKHMVQDKMHSRARGPRATLTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1133
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD EV VC CG +GY + C CK + M +PYA KLL
Sbjct: 1134 SQLLLERLMISSDRHEVDVCEGCGFMGYSGW------CQRCKTSAGVVKMVIPYAAKLLV 1187
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNVV RL+L +
Sbjct: 1188 QELFSMNVVARLRLQD 1203
[144][TOP]
>UniRef100_B2B0Z1 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2B0Z1_PODAN
Length = 1160
Score = 176 bits (446), Expect = 1e-42
Identities = 84/136 (61%), Positives = 102/136 (75%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPI+YQ+LKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYGA
Sbjct: 1025 YLFNGPIFYQRLKHMVADKMHSRSRGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGA 1084
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM SSD +V VC CGL+GY Y C TCK N+ M +PYA KLL
Sbjct: 1085 SQLLLERLMYSSDVTKVDVCERCGLMGYKGY------CQTCKTTSNVTKMNMPYAAKLLL 1138
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV R++L +
Sbjct: 1139 QELISMNVGVRMQLED 1154
[145][TOP]
>UniRef100_C9SKJ8 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SKJ8_9PEZI
Length = 1105
Score = 175 bits (444), Expect = 2e-42
Identities = 84/136 (61%), Positives = 102/136 (75%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQ+LKHMV DKMH+R GPR ++TRQPTEG+S+ GGLR+GEMERDCLIAYGA
Sbjct: 969 YIFNGPIYYQRLKHMVQDKMHSRARGPRAILTRQPTEGRSREGGLRLGEMERDCLIAYGA 1028
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD E+ +C+ CGL GY Y C TC++ + M +PYA KLL
Sbjct: 1029 SQLLLERLMISSDGTEIDICQQCGLFGYKGY------CHTCRSTKEVTKMTMPYAAKLLV 1082
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV RL++ +
Sbjct: 1083 QELISMNVGVRLQMED 1098
[146][TOP]
>UniRef100_C7YHY2 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YHY2_NECH7
Length = 1156
Score = 175 bits (443), Expect = 3e-42
Identities = 84/136 (61%), Positives = 102/136 (75%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQ+LKHMV DKMH+R GP+ ++TRQPTEG+S+ GGLR+GEMERDCLIAYGA
Sbjct: 1021 YIFNGPIYYQRLKHMVQDKMHSRSRGPKAILTRQPTEGRSREGGLRLGEMERDCLIAYGA 1080
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD E+ +C+ CGL GY Y C TCK+ + M +PYA KLL
Sbjct: 1081 SQLLLERLMISSDGTEIDICQQCGLFGYKGY------CHTCKSTREVTKMTMPYAAKLLV 1134
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV RL++ +
Sbjct: 1135 QELISMNVGVRLQMED 1150
[147][TOP]
>UniRef100_A4R1B6 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4R1B6_MAGGR
Length = 1158
Score = 174 bits (442), Expect = 4e-42
Identities = 83/136 (61%), Positives = 102/136 (75%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQ+LKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYGA
Sbjct: 1023 YLFNGPIYYQRLKHMVQDKMHSRAKGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGA 1082
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLM+SSD ++ +C+ CGL GY Y C TCK+ + M +PYA KLL
Sbjct: 1083 SQLLLERLMLSSDATKIDICQRCGLFGYKGY------CQTCKSTKEVTEMTMPYAAKLLV 1136
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV RL L +
Sbjct: 1137 QELISMNVGVRLVLED 1152
[148][TOP]
>UniRef100_Q2GW04 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2GW04_CHAGB
Length = 1155
Score = 174 bits (441), Expect = 5e-42
Identities = 84/136 (61%), Positives = 102/136 (75%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQ+LKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYGA
Sbjct: 1020 YLFNGPIYYQRLKHMVQDKMHSRSRGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGA 1079
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD +V +C CGLLGY K C TC + + M +PYA KLL
Sbjct: 1080 SQLLLERLMISSDGTQVDICELCGLLGY------KGFCQTCGSTSQVTQMTMPYAAKLLV 1133
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV R++L +
Sbjct: 1134 QELISMNVGVRMQLED 1149
[149][TOP]
>UniRef100_Q4PBR7 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4PBR7_USTMA
Length = 1169
Score = 172 bits (437), Expect = 1e-41
Identities = 79/137 (57%), Positives = 101/137 (73%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y++ GPIYYQ+LKHMV DKMHAR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 1038 YVYFGPIYYQRLKHMVQDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1097
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ L+ ERLMISSD F V C+ CGL+GY + C C + ++ + +PY KL+
Sbjct: 1098 TQLLLERLMISSDAFTVHACQKCGLMGYNGF------CPYCSSSKHVVQLTIPYGTKLML 1151
Query: 236 QELQSMNVVPRLKLTEA 186
QEL +M VVPRL L +A
Sbjct: 1152 QELMAMQVVPRLVLEDA 1168
[150][TOP]
>UniRef100_C9ZHX4 DNA-directed RNA polymerase III, putative n=2 Tax=Trypanosoma brucei
RepID=C9ZHX4_TRYBG
Length = 1129
Score = 172 bits (435), Expect = 2e-41
Identities = 78/134 (58%), Positives = 100/134 (74%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQ+LKHMV DKMHAR +GPR M+TRQPTEG+S++GGLRVGEMERDC++ YGA
Sbjct: 996 YVFFGPIYYQRLKHMVTDKMHARATGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGA 1055
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERL++SSD F + +CR CG +GY Y C+ C + ++ + +PYA KLL
Sbjct: 1056 SNLLNERLLVSSDLFTIDICRCCGFMGYNGY------CSYCNAKNTVSRVNVPYAFKLLL 1109
Query: 236 QELQSMNVVPRLKL 195
QELQ M + RL L
Sbjct: 1110 QELQGMGISTRLSL 1123
[151][TOP]
>UniRef100_Q4DWA6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Trypanosoma cruzi
RepID=Q4DWA6_TRYCR
Length = 382
Score = 171 bits (434), Expect = 3e-41
Identities = 80/134 (59%), Positives = 99/134 (73%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQ+LKHMV DKMHAR +GPR M+TRQPTEG+S++GGLRVGEMERDC++ YGA
Sbjct: 249 YVFFGPIYYQRLKHMVTDKMHARATGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGA 308
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERL++SSD F V CR+CG LGY Y C C + ++ + +PYA KLL
Sbjct: 309 SNLLNERLLLSSDLFTVDTCRSCGFLGYCGY------CPYCNTKNTVSHVNVPYAFKLLL 362
Query: 236 QELQSMNVVPRLKL 195
QELQ M + RL L
Sbjct: 363 QELQGMGISTRLSL 376
[152][TOP]
>UniRef100_Q4D9P5 DNA-directed RNA polymerase n=1 Tax=Trypanosoma cruzi
RepID=Q4D9P5_TRYCR
Length = 1130
Score = 171 bits (434), Expect = 3e-41
Identities = 80/134 (59%), Positives = 99/134 (73%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQ+LKHMV DKMHAR +GPR M+TRQPTEG+S++GGLRVGEMERDC++ YGA
Sbjct: 997 YVFFGPIYYQRLKHMVTDKMHARATGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGA 1056
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERL++SSD F V CR+CG LGY Y C C + ++ + +PYA KLL
Sbjct: 1057 SNLLNERLLLSSDLFTVDTCRSCGFLGYCGY------CPYCNTKNTVSHVNVPYAFKLLL 1110
Query: 236 QELQSMNVVPRLKL 195
QELQ M + RL L
Sbjct: 1111 QELQGMGISTRLSL 1124
[153][TOP]
>UniRef100_Q9BJ42 DNA-directed RNA polymerase (Fragment) n=1 Tax=Leishmania major
RepID=Q9BJ42_LEIMA
Length = 606
Score = 169 bits (427), Expect = 2e-40
Identities = 81/134 (60%), Positives = 97/134 (72%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQ+LKHMV DKMHAR +GPR M+TRQPTEG+S++GGLRVGEMERDC++ YGA
Sbjct: 475 YVFFGPIYYQRLKHMVTDKMHARSTGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGA 534
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERL+ISSD F +C CG LGY N CT CK + + +PYA KLL
Sbjct: 535 SNLLNERLLISSDMFTADICHVCGNLGYNNR------CTYCKTKGTTSKVNMPYAFKLLI 588
Query: 236 QELQSMNVVPRLKL 195
QELQ M V RL +
Sbjct: 589 QELQGMGVSLRLTM 602
[154][TOP]
>UniRef100_Q4QD43 DNA-directed RNA polymerase n=1 Tax=Leishmania major
RepID=Q4QD43_LEIMA
Length = 1132
Score = 169 bits (427), Expect = 2e-40
Identities = 81/134 (60%), Positives = 97/134 (72%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQ+LKHMV DKMHAR +GPR M+TRQPTEG+S++GGLRVGEMERDC++ YGA
Sbjct: 1001 YVFFGPIYYQRLKHMVTDKMHARSTGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGA 1060
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERL+ISSD F +C CG LGY N CT CK + + +PYA KLL
Sbjct: 1061 SNLLNERLLISSDMFTADICHVCGNLGYNNR------CTYCKTKGTTSKVNMPYAFKLLI 1114
Query: 236 QELQSMNVVPRLKL 195
QELQ M V RL +
Sbjct: 1115 QELQGMGVSLRLTM 1128
[155][TOP]
>UniRef100_A4HBG9 DNA-directed RNA polymerase n=1 Tax=Leishmania braziliensis
RepID=A4HBG9_LEIBR
Length = 1125
Score = 169 bits (427), Expect = 2e-40
Identities = 81/134 (60%), Positives = 97/134 (72%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GPIYYQ+LKHMV DKMHAR +GPR M+TRQPTEG+S++GGLRVGEMERDC++ YGA
Sbjct: 994 YVFFGPIYYQRLKHMVTDKMHARSTGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGA 1053
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERL+ISSD F +C CG LGY N CT CK + + +PYA KLL
Sbjct: 1054 SSLLNERLLISSDLFTADICHVCGNLGYNNR------CTYCKTKGTTSKVNMPYAFKLLI 1107
Query: 236 QELQSMNVVPRLKL 195
QELQ M V RL +
Sbjct: 1108 QELQGMGVSLRLTM 1121
[156][TOP]
>UniRef100_Q0V2J8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q0V2J8_PHANO
Length = 1443
Score = 166 bits (421), Expect = 1e-39
Identities = 81/136 (59%), Positives = 97/136 (71%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y F GPIYYQKLKHMV DKMHAR GPR ++TRQPTEG++++GGLR+GEMERDCLIAYGA
Sbjct: 1308 YTFFGPIYYQKLKHMVQDKMHARARGPRAILTRQPTEGRARDGGLRLGEMERDCLIAYGA 1367
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD V VC CG +GY Y C C++ + + +PYA KLL
Sbjct: 1368 SQLLLERLMISSDAHNVDVCEKCGQMGYSGY------CKLCESEKAVRRITMPYAAKLLI 1421
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNV + L +
Sbjct: 1422 QELGSMNVKVTIGLAD 1437
[157][TOP]
>UniRef100_C4V6K7 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4V6K7_NOSCE
Length = 1091
Score = 166 bits (421), Expect = 1e-39
Identities = 81/134 (60%), Positives = 100/134 (74%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GP++YQ+LKHMV DK+H R GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGA
Sbjct: 963 YIFYGPVFYQRLKHMVADKIHMRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIGYGA 1022
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S LI ERLM SSD FE C+ CG+L + K C C N N ++LPYACKLLF
Sbjct: 1023 SSLIVERLMESSDLFETFCCKNCGIL------VPKNGCNVC-NDTNPLPIRLPYACKLLF 1075
Query: 236 QELQSMNVVPRLKL 195
QEL SMN++P+L +
Sbjct: 1076 QELMSMNILPKLNV 1089
[158][TOP]
>UniRef100_C6LZ34 DNA-directed RNA polymerase n=1 Tax=Giardia intestinalis ATCC 50581
RepID=C6LZ34_GIALA
Length = 1239
Score = 165 bits (418), Expect = 2e-39
Identities = 79/138 (57%), Positives = 106/138 (76%), Gaps = 1/138 (0%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMV DK+H+RG+GP M+TRQPTEG+ +GGLR+GEMERDC I+YGA
Sbjct: 1104 YIFNGPIYYQKLKHMVKDKIHSRGTGPITMLTRQPTEGRRVHGGLRMGEMERDCAISYGA 1163
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAV-CTTCKNGDNIATMKLPYACKLL 240
S L+ ER M+SSD F VC ACGL ++Y+ A+ C TC++G ++ +++PYA KL+
Sbjct: 1164 SALLLERFMLSSDEFLAYVCEACGL---FSYERNGALWCPTCQSGKDVVKIRIPYAAKLM 1220
Query: 239 FQELQSMNVVPRLKLTEA 186
QEL SM V+ R++L ++
Sbjct: 1221 IQELISMGVLVRMQLEDS 1238
[159][TOP]
>UniRef100_C4QD48 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
RepID=C4QD48_SCHMA
Length = 1126
Score = 165 bits (418), Expect = 2e-39
Identities = 75/137 (54%), Positives = 99/137 (72%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
+I+ GP+YYQ+LKHMV+DK+HAR GP +TRQPTEG+S+ GGLRVGEMERDC IAYG
Sbjct: 985 FIYFGPVYYQRLKHMVMDKVHARSRGPVTALTRQPTEGRSREGGLRVGEMERDCFIAYGT 1044
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERL++SSD ++ VC CGLL C C++ + ++++PYACKLLF
Sbjct: 1045 SQLLLERLLLSSDAYDACVCEKCGLLA-----TSPNWCQYCRSSRQVVSVRMPYACKLLF 1099
Query: 236 QELQSMNVVPRLKLTEA 186
QEL M ++PRL+L A
Sbjct: 1100 QELMCMRILPRLRLRAA 1116
[160][TOP]
>UniRef100_C4QD47 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
RepID=C4QD47_SCHMA
Length = 1128
Score = 165 bits (418), Expect = 2e-39
Identities = 75/137 (54%), Positives = 99/137 (72%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
+I+ GP+YYQ+LKHMV+DK+HAR GP +TRQPTEG+S+ GGLRVGEMERDC IAYG
Sbjct: 987 FIYFGPVYYQRLKHMVMDKVHARSRGPVTALTRQPTEGRSREGGLRVGEMERDCFIAYGT 1046
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERL++SSD ++ VC CGLL C C++ + ++++PYACKLLF
Sbjct: 1047 SQLLLERLLLSSDAYDACVCEKCGLLA-----TSPNWCQYCRSSRQVVSVRMPYACKLLF 1101
Query: 236 QELQSMNVVPRLKLTEA 186
QEL M ++PRL+L A
Sbjct: 1102 QELMCMRILPRLRLRAA 1118
[161][TOP]
>UniRef100_Q5D921 SJCHGC09486 protein (Fragment) n=1 Tax=Schistosoma japonicum
RepID=Q5D921_SCHJA
Length = 204
Score = 164 bits (416), Expect = 4e-39
Identities = 74/133 (55%), Positives = 99/133 (74%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 66 IFLGPTYYQRLKHMVDDKIHSRSRGPVQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 125
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CGL+ + + K C +CKN I+ +KLPYACKLLFQ
Sbjct: 126 QFLRERLFFASDPYQVYVCNLCGLIAIAHQRNKTYECRSCKNTTQISLVKLPYACKLLFQ 185
Query: 233 ELQSMNVVPRLKL 195
EL SM++ PR+ +
Sbjct: 186 ELMSMSIAPRMMI 198
[162][TOP]
>UniRef100_C4Q1D7 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
RepID=C4Q1D7_SCHMA
Length = 1304
Score = 164 bits (416), Expect = 4e-39
Identities = 74/133 (55%), Positives = 99/133 (74%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1166 IFLGPTYYQRLKHMVDDKIHSRSRGPVQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1225
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CGL+ + + K C +CKN I+ +KLPYACKLLFQ
Sbjct: 1226 QFLRERLFFASDPYQVYVCNLCGLIAIAHQRNKTYECRSCKNTTQISLVKLPYACKLLFQ 1285
Query: 233 ELQSMNVVPRLKL 195
EL SM++ PR+ +
Sbjct: 1286 ELMSMSIAPRMMI 1298
[163][TOP]
>UniRef100_Q4U9X1 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4U9X1_THEAN
Length = 1223
Score = 164 bits (415), Expect = 5e-39
Identities = 77/136 (56%), Positives = 96/136 (70%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+HAR GP M+TRQPTEG+S+ GGLR GEMERDC+I++GA+
Sbjct: 1088 IFVGPTYYQRLKHMVEDKIHARARGPVTMLTRQPTEGRSREGGLRFGEMERDCMISHGAA 1147
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
++ ERL SD + V VC CGLL N CT C N I+ + +PYACKLL Q
Sbjct: 1148 KMLKERLFDQSDAYRVHVCNFCGLLSVANLNNSSFQCTACDNKTQISQVTIPYACKLLLQ 1207
Query: 233 ELQSMNVVPRLKLTEA 186
EL +M + P+L LTEA
Sbjct: 1208 ELMAMAIYPKLILTEA 1223
[164][TOP]
>UniRef100_Q4N2K9 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4N2K9_THEPA
Length = 1190
Score = 164 bits (415), Expect = 5e-39
Identities = 77/136 (56%), Positives = 96/136 (70%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+HAR GP M+TRQPTEG+S+ GGLR GEMERDC+I++GA+
Sbjct: 1055 IFVGPTYYQRLKHMVEDKIHARARGPVTMLTRQPTEGRSREGGLRFGEMERDCMISHGAA 1114
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
++ ERL SD + V VC CGLL N CT C N I+ + +PYACKLL Q
Sbjct: 1115 KMLKERLFDQSDAYRVHVCNFCGLLSVANLNNSSFQCTACDNKTQISQVTIPYACKLLLQ 1174
Query: 233 ELQSMNVVPRLKLTEA 186
EL +M + P+L LTEA
Sbjct: 1175 ELMAMAIYPKLILTEA 1190
[165][TOP]
>UniRef100_A0D7M6 DNA-directed RNA polymerase n=1 Tax=Paramecium tetraurelia
RepID=A0D7M6_PARTE
Length = 1131
Score = 164 bits (415), Expect = 5e-39
Identities = 76/134 (56%), Positives = 99/134 (73%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y++ GPI+YQ+LKHMV+DK+HAR GP +TRQP EG++K+GG R+GEMERDC +AYGA
Sbjct: 993 YVYQGPIFYQRLKHMVIDKIHARAKGPMEKLTRQPVEGRAKDGGQRIGEMERDCFLAYGA 1052
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERL+ISSDPF V VC CG+ +VC C N D + ++LPY CKLLF
Sbjct: 1053 SNLLIERLLISSDPFNVYVCEICGMF------KSDSVCRGC-NTDKVYQIRLPYCCKLLF 1105
Query: 236 QELQSMNVVPRLKL 195
QEL +MN+ P+L+L
Sbjct: 1106 QELLAMNIKPKLQL 1119
[166][TOP]
>UniRef100_A2E3T5 DNA-directed RNA polymerase n=1 Tax=Trichomonas vaginalis G3
RepID=A2E3T5_TRIVA
Length = 1142
Score = 164 bits (414), Expect = 6e-39
Identities = 72/136 (52%), Positives = 99/136 (72%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GP++YQ LKHMV DKM AR +G +TRQPT+G+S+ GG+R+GEMERDCLI YGA
Sbjct: 1012 YIFFGPVFYQSLKHMVKDKMQARATGQVQYLTRQPTQGRSRQGGMRLGEMERDCLIGYGA 1071
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ ++YER++ISSD +E VC CG +GY Y CT CK + + +++PYACKLLF
Sbjct: 1072 ASILYERMLISSDVYEANVCAKCGFIGYEGY------CTHCKTKEYMKIVRMPYACKLLF 1125
Query: 236 QELQSMNVVPRLKLTE 189
EL +M + P+++L +
Sbjct: 1126 YELMAMGIAPKVRLED 1141
[167][TOP]
>UniRef100_A8B2N4 DNA-directed RNA polymerase n=1 Tax=Giardia lamblia ATCC 50803
RepID=A8B2N4_GIALA
Length = 1238
Score = 163 bits (413), Expect = 8e-39
Identities = 78/137 (56%), Positives = 101/137 (73%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPIYYQKLKHMV DK+H+RG+GP M+TRQPTEG+ +GGLR+GEMERDC I+YGA
Sbjct: 1103 YIFNGPIYYQKLKHMVKDKIHSRGTGPITMLTRQPTEGRRVHGGLRMGEMERDCAISYGA 1162
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ER M+SSD F VC CGL Y K C TC++G ++ +++PYA KL+
Sbjct: 1163 SALLLERFMLSSDDFLAYVCETCGLFSY--EKNGVLWCPTCQSGKDVVKIRIPYAAKLMI 1220
Query: 236 QELQSMNVVPRLKLTEA 186
QEL SM V+ R++L ++
Sbjct: 1221 QELISMGVLVRMQLEDS 1237
[168][TOP]
>UniRef100_Q1L5Z3 DNA-directed RNA polymerase n=1 Tax=Antirrhinum majus
RepID=Q1L5Z3_ANTMA
Length = 1198
Score = 162 bits (410), Expect = 2e-38
Identities = 75/131 (57%), Positives = 95/131 (72%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1052 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1111
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + V VC CGL+G N K C +CKN +I + +PYACKLL Q
Sbjct: 1112 HFLKERLFDQSDAYRVHVCERCGLMGIANLKKHSYECRSCKNKTDIVQIYIPYACKLLIQ 1171
Query: 233 ELQSMNVVPRL 201
EL SM + PRL
Sbjct: 1172 ELMSMAIAPRL 1182
[169][TOP]
>UniRef100_Q27826 DNA-directed RNA polymerase n=1 Tax=Euplotes octocarinatus
RepID=Q27826_EUPOC
Length = 1194
Score = 162 bits (409), Expect = 2e-38
Identities = 73/131 (55%), Positives = 98/131 (74%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++TRQPTEG+S++GGLR GEMERDC++++GA+
Sbjct: 1059 IFLGPTYYQRLKHMVDDKIHSRSRGPLQILTRQPTEGRSRHGGLRFGEMERDCMVSHGAA 1118
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + V VCR CGL+ N + +K +C C+N NI + LPYACKLLFQ
Sbjct: 1119 RFLKERLFDVSDCYTVHVCRICGLICEANLRQQKYLCRGCQNSTNICQVGLPYACKLLFQ 1178
Query: 233 ELQSMNVVPRL 201
EL +M + PR+
Sbjct: 1179 ELMAMQIAPRM 1189
[170][TOP]
>UniRef100_A9SJE5 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9SJE5_PHYPA
Length = 1185
Score = 161 bits (407), Expect = 4e-38
Identities = 73/132 (55%), Positives = 95/132 (71%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
+IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA
Sbjct: 1037 HIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGA 1096
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ + ERL SD + V VC CG++ N K C CKN +I + +PYACKLLF
Sbjct: 1097 AHFLKERLFDQSDAYRVHVCEHCGIIAIANLKKNTYECRGCKNNTDIVQVHIPYACKLLF 1156
Query: 236 QELQSMNVVPRL 201
QEL SM + PR+
Sbjct: 1157 QELMSMAIAPRM 1168
[171][TOP]
>UniRef100_P38420 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Arabidopsis
thaliana RepID=RPB2_ARATH
Length = 1188
Score = 161 bits (407), Expect = 4e-38
Identities = 74/131 (56%), Positives = 94/131 (71%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1046 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1105
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + V VC CGL+ N K C CKN +I + +PYACKLLFQ
Sbjct: 1106 HFLKERLFDQSDAYRVHVCEVCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQ 1165
Query: 233 ELQSMNVVPRL 201
EL SM + PR+
Sbjct: 1166 ELMSMAIAPRM 1176
[172][TOP]
>UniRef100_UPI000180B7B7 PREDICTED: similar to POLR2B protein n=1 Tax=Ciona intestinalis
RepID=UPI000180B7B7
Length = 1173
Score = 160 bits (406), Expect = 5e-38
Identities = 72/134 (53%), Positives = 97/134 (72%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+F GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1040 VFFGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1099
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP+ V VC CGL+ N + C CKN +I+ +++PYACKLLFQ
Sbjct: 1100 QFLRERLFEASDPYRVHVCNLCGLIAIANLRSHTFECRGCKNKTHISQVRMPYACKLLFQ 1159
Query: 233 ELQSMNVVPRLKLT 192
EL SM++ PR+ +T
Sbjct: 1160 ELMSMSIAPRMMVT 1173
[173][TOP]
>UniRef100_Q1L5Y8 DNA-directed RNA polymerase n=1 Tax=Antirrhinum majus
RepID=Q1L5Y8_ANTMA
Length = 1200
Score = 160 bits (406), Expect = 5e-38
Identities = 73/131 (55%), Positives = 94/131 (71%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1054 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1113
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + + VC CGL+ N K C CKN +I + +PYACKLLFQ
Sbjct: 1114 HFLKERLFDQSDAYRIHVCEQCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1173
Query: 233 ELQSMNVVPRL 201
EL SM + PR+
Sbjct: 1174 ELMSMAIAPRM 1184
[174][TOP]
>UniRef100_Q1L5B5 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum
RepID=Q1L5B5_RHOMC
Length = 1191
Score = 160 bits (406), Expect = 5e-38
Identities = 73/131 (55%), Positives = 94/131 (71%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1045 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1104
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + + VC CGL+ N K C CKN +I + +PYACKLLFQ
Sbjct: 1105 HFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1164
Query: 233 ELQSMNVVPRL 201
EL SM + PR+
Sbjct: 1165 ELMSMAIAPRM 1175
[175][TOP]
>UniRef100_Q1L5A5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Linanthus
californicus RepID=Q1L5A5_9ERIC
Length = 733
Score = 160 bits (406), Expect = 5e-38
Identities = 74/131 (56%), Positives = 94/131 (71%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 589 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 648
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + V VC CGL+ N K C CKN +I + +PYACKLLFQ
Sbjct: 649 HFLKERLFDQSDAYRVHVCERCGLVAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 708
Query: 233 ELQSMNVVPRL 201
EL SM + PR+
Sbjct: 709 ELMSMAIAPRM 719
[176][TOP]
>UniRef100_Q0DQ04 DNA-directed RNA polymerase (Fragment) n=1 Tax=Oryza sativa
Japonica Group RepID=Q0DQ04_ORYSJ
Length = 368
Score = 160 bits (406), Expect = 5e-38
Identities = 73/131 (55%), Positives = 94/131 (71%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 224 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 283
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + V VC CGL+ N K C CKN +I + +PYACKLLFQ
Sbjct: 284 FFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 343
Query: 233 ELQSMNVVPRL 201
EL +M + PR+
Sbjct: 344 ELMAMAIAPRM 354
[177][TOP]
>UniRef100_C5WR62 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5WR62_SORBI
Length = 1218
Score = 160 bits (406), Expect = 5e-38
Identities = 73/131 (55%), Positives = 94/131 (71%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1074 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1133
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + V VC CGL+ N K C CKN +I + +PYACKLLFQ
Sbjct: 1134 FFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1193
Query: 233 ELQSMNVVPRL 201
EL +M + PR+
Sbjct: 1194 ELMAMAIAPRM 1204
[178][TOP]
>UniRef100_C0PI96 DNA-directed RNA polymerase n=1 Tax=Zea mays RepID=C0PI96_MAIZE
Length = 362
Score = 160 bits (406), Expect = 5e-38
Identities = 73/131 (55%), Positives = 94/131 (71%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 218 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 277
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + V VC CGL+ N K C CKN +I + +PYACKLLFQ
Sbjct: 278 FFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 337
Query: 233 ELQSMNVVPRL 201
EL +M + PR+
Sbjct: 338 ELMAMAIAPRM 348
[179][TOP]
>UniRef100_B9FA12 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FA12_ORYSJ
Length = 1218
Score = 160 bits (406), Expect = 5e-38
Identities = 73/131 (55%), Positives = 94/131 (71%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1074 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1133
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + V VC CGL+ N K C CKN +I + +PYACKLLFQ
Sbjct: 1134 FFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1193
Query: 233 ELQSMNVVPRL 201
EL +M + PR+
Sbjct: 1194 ELMAMAIAPRM 1204
[180][TOP]
>UniRef100_Q10G20 DNA-directed RNA polymerase n=2 Tax=Oryza sativa RepID=Q10G20_ORYSJ
Length = 1222
Score = 160 bits (406), Expect = 5e-38
Identities = 73/131 (55%), Positives = 94/131 (71%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1078 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1137
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + V VC CGL+ N K C CKN +I + +PYACKLLFQ
Sbjct: 1138 FFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1197
Query: 233 ELQSMNVVPRL 201
EL +M + PR+
Sbjct: 1198 ELMAMAIAPRM 1208
[181][TOP]
>UniRef100_A7ATA0 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7ATA0_BABBO
Length = 1207
Score = 160 bits (406), Expect = 5e-38
Identities = 75/136 (55%), Positives = 96/136 (70%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+HAR GP M+TRQPTEG+S++GGLR GEMERDC+I++GA+
Sbjct: 1072 IFIGPTYYQRLKHMVEDKIHARARGPVTMLTRQPTEGRSRDGGLRFGEMERDCMISHGAA 1131
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
++ ERL SD F + VC CGL + CT C N NI+ + +PYACKLL Q
Sbjct: 1132 KMLKERLFDQSDAFRIHVCDRCGLCCVADLNRNNFECTACDNKTNISQVTIPYACKLLIQ 1191
Query: 233 ELQSMNVVPRLKLTEA 186
EL +M + P+L LT A
Sbjct: 1192 ELMAMAIYPKLLLTPA 1207
[182][TOP]
>UniRef100_A7PJ31 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7PJ31_VITVI
Length = 1220
Score = 160 bits (405), Expect = 7e-38
Identities = 74/135 (54%), Positives = 95/135 (70%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1074 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1133
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + V VC CGL+ N K C CKN +I + +PYACKLLFQ
Sbjct: 1134 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1193
Query: 233 ELQSMNVVPRLKLTE 189
EL +M + PR+ E
Sbjct: 1194 ELMAMAIAPRMLTKE 1208
[183][TOP]
>UniRef100_A5C1N0 DNA-directed RNA polymerase n=2 Tax=Vitis RepID=A5C1N0_VITVI
Length = 1193
Score = 160 bits (405), Expect = 7e-38
Identities = 74/135 (54%), Positives = 95/135 (70%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1047 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1106
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + V VC CGL+ N K C CKN +I + +PYACKLLFQ
Sbjct: 1107 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1166
Query: 233 ELQSMNVVPRLKLTE 189
EL +M + PR+ E
Sbjct: 1167 ELMAMAIAPRMLTKE 1181
[184][TOP]
>UniRef100_Q1L5Z0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nicotiana sylvestris
RepID=Q1L5Z0_NICSY
Length = 1087
Score = 160 bits (404), Expect = 9e-38
Identities = 73/131 (55%), Positives = 94/131 (71%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 948 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1007
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + V VC CGL+ N K C CKN +I + +PYACKLLFQ
Sbjct: 1008 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYACKLLFQ 1067
Query: 233 ELQSMNVVPRL 201
EL +M + PR+
Sbjct: 1068 ELMAMAIAPRM 1078
[185][TOP]
>UniRef100_Q1L5Y9 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida
RepID=Q1L5Y9_PETHY
Length = 1195
Score = 160 bits (404), Expect = 9e-38
Identities = 73/131 (55%), Positives = 94/131 (71%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1049 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1108
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + V VC CGL+ N K C CKN +I + +PYACKLLFQ
Sbjct: 1109 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1168
Query: 233 ELQSMNVVPRL 201
EL +M + PR+
Sbjct: 1169 ELMAMAIAPRM 1179
[186][TOP]
>UniRef100_Q1ANF2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spirogyra sp. UWCC
FW670 RepID=Q1ANF2_9VIRI
Length = 670
Score = 160 bits (404), Expect = 9e-38
Identities = 74/132 (56%), Positives = 95/132 (71%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
+IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA
Sbjct: 528 HIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGA 587
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ + ERL SD + V VC CGL+ N K C CKN +I + +PYACKLLF
Sbjct: 588 AHFLKERLFDQSDAYRVHVCEHCGLIANANLKKSFFECRGCKNKTDIVQVHIPYACKLLF 647
Query: 236 QELQSMNVVPRL 201
QEL SM + PR+
Sbjct: 648 QELMSMAIAPRM 659
[187][TOP]
>UniRef100_B9RZ91 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9RZ91_RICCO
Length = 1194
Score = 160 bits (404), Expect = 9e-38
Identities = 73/131 (55%), Positives = 94/131 (71%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1048 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1107
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + V VC CGL+ N K C CKN +I + +PYACKLLFQ
Sbjct: 1108 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1167
Query: 233 ELQSMNVVPRL 201
EL +M + PR+
Sbjct: 1168 ELMAMAIAPRM 1178
[188][TOP]
>UniRef100_B9H2V3 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9H2V3_POPTR
Length = 421
Score = 160 bits (404), Expect = 9e-38
Identities = 73/131 (55%), Positives = 94/131 (71%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 275 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 334
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + V VC CGL+ N K C CKN +I + +PYACKLLFQ
Sbjct: 335 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 394
Query: 233 ELQSMNVVPRL 201
EL +M + PR+
Sbjct: 395 ELMAMAIAPRM 405
[189][TOP]
>UniRef100_C0SI08 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0SI08_PARBP
Length = 1232
Score = 160 bits (404), Expect = 9e-38
Identities = 81/136 (59%), Positives = 96/136 (70%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+FMGPIYYQKLKHMV DKMH+R GPR ++TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1110 YVFMGPIYYQKLKHMVQDKMHSRARGPRAILTRQPTEGRSRDGGLRLGEMERDCLIAYGT 1169
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD +EV VC +CG +GY + C+ KLL
Sbjct: 1170 SQLLLERLMISSDQYEVDVCESCGFMGYSGW---------CQRS------------KLLV 1208
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMNVV RLKL +
Sbjct: 1209 QELFSMNVVARLKLAD 1224
[190][TOP]
>UniRef100_B7XI25 DNA-directed RNA polymerase n=1 Tax=Enterocytozoon bieneusi H348
RepID=B7XI25_ENTBH
Length = 1107
Score = 160 bits (404), Expect = 9e-38
Identities = 76/134 (56%), Positives = 98/134 (73%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
YIF GPI+YQ+LKHMV DK+H R GPR ++TRQPTEG+SK+GGLR+GEMERDCLI YGA
Sbjct: 979 YIFFGPIFYQRLKHMVADKIHCRSRGPRAVLTRQPTEGRSKDGGLRLGEMERDCLIGYGA 1038
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ L+ ERLM SD F+ +C CG++ Y K C C I +K+PYACKLLF
Sbjct: 1039 NSLLNERLMHCSDEFDAFICETCGIICY------KERCYWCSKKPII--VKMPYACKLLF 1090
Query: 236 QELQSMNVVPRLKL 195
QE+ +MN++P++ L
Sbjct: 1091 QEMMAMNILPKIIL 1104
[191][TOP]
>UniRef100_Q42877 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Solanum
lycopersicum RepID=RPB2_SOLLC
Length = 1191
Score = 160 bits (404), Expect = 9e-38
Identities = 73/131 (55%), Positives = 94/131 (71%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1045 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1104
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + V VC CGL+ N K C CKN +I + +PYACKLLFQ
Sbjct: 1105 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1164
Query: 233 ELQSMNVVPRL 201
EL +M + PR+
Sbjct: 1165 ELMAMAIAPRM 1175
[192][TOP]
>UniRef100_A0RXX0 DNA-directed RNA polymerase, beta subunit/140 kD subunit n=1
Tax=Cenarchaeum symbiosum RepID=A0RXX0_CENSY
Length = 1115
Score = 159 bits (403), Expect = 1e-37
Identities = 72/135 (53%), Positives = 100/135 (74%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+F+G +YYQKL HMV DK+HAR G M+T+QPTEG+++ GGLR GEMERDCLIAYGAS
Sbjct: 979 VFIGVVYYQKLHHMVADKIHARARGQVQMLTKQPTEGRARGGGLRFGEMERDCLIAYGAS 1038
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
M++ +RL+ SD ++ VC CGL+ Y++ K +K VC C + ++++ + YA KLL Q
Sbjct: 1039 MILKDRLLDESDKSDIYVCERCGLVAYHDVKQRKYVCRVCGDKAKVSSVSVAYAFKLLLQ 1098
Query: 233 ELQSMNVVPRLKLTE 189
E+QS+NV PRL + E
Sbjct: 1099 EMQSLNVAPRLLIKE 1113
[193][TOP]
>UniRef100_UPI0001926137 PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata
RepID=UPI0001926137
Length = 1426
Score = 159 bits (402), Expect = 2e-37
Identities = 70/133 (52%), Positives = 97/133 (72%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+F+GP YYQ+LKHMV DK+H+R GP ++TRQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1046 VFLGPTYYQRLKHMVDDKIHSRARGPVQILTRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1105
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SD + V VC CGL+ N + C +CKN ++ +++PYACKLLFQ
Sbjct: 1106 QFLNERLFEASDAYRVHVCNLCGLIAIANLRNNTFECRSCKNKTQVSQIRIPYACKLLFQ 1165
Query: 233 ELQSMNVVPRLKL 195
EL SM++ PR+ +
Sbjct: 1166 ELMSMSIAPRMMI 1178
[194][TOP]
>UniRef100_C0HA74 DNA-directed RNA polymerase n=1 Tax=Salmo salar RepID=C0HA74_SALSA
Length = 1174
Score = 159 bits (402), Expect = 2e-37
Identities = 71/131 (54%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1041 IFLGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1100
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CGL+ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1101 QFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1160
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1161 ELMSMSIAPRM 1171
[195][TOP]
>UniRef100_A9UUX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=A9UUX4_MONBE
Length = 1166
Score = 159 bits (402), Expect = 2e-37
Identities = 72/131 (54%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+F+GP YYQ+LKHMV DK+HAR GP +TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1029 VFLGPTYYQRLKHMVDDKIHARARGPLQNLTRQPMEGRSRDGGLRFGEMERDCMIAHGAA 1088
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SDP+ + VC CGL + + CT C+N ++ ++LPYACKLLFQ
Sbjct: 1089 QFLRERLFEVSDPYSLHVCDVCGLPCVAKLEKNEFECTRCRNSTRVSRIRLPYACKLLFQ 1148
Query: 233 ELQSMNVVPRL 201
EL +M+VVPR+
Sbjct: 1149 ELMTMSVVPRM 1159
[196][TOP]
>UniRef100_Q10578 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Caenorhabditis
elegans RepID=RPB2_CAEEL
Length = 1193
Score = 159 bits (402), Expect = 2e-37
Identities = 73/141 (51%), Positives = 98/141 (69%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF GP YYQ+LKHMV DK+H+R GP MM RQP EG++++GGLR GEMERDC I++GA+
Sbjct: 1047 IFFGPTYYQRLKHMVDDKIHSRARGPIQMMNRQPMEGRARDGGLRFGEMERDCQISHGAT 1106
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SDP+ V VC CGL+ N + C C+N ++ +++PYACKLLFQ
Sbjct: 1107 QFLRERLFEVSDPYHVYVCNNCGLIVVANLRTNSFECKACRNKTQVSAVRIPYACKLLFQ 1166
Query: 233 ELQSMNVVPRLKLTEA*SQRN 171
EL SM++ PRL + S+R+
Sbjct: 1167 ELMSMSIAPRLMVKPRQSKRS 1187
[197][TOP]
>UniRef100_UPI0001B09250 DNA directed RNA polymerase II polypeptide B n=1 Tax=Danio rerio
RepID=UPI0001B09250
Length = 1174
Score = 159 bits (401), Expect = 2e-37
Identities = 71/131 (54%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1041 IFVGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1100
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CGL+ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1101 QFLKERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1160
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1161 ELMSMSIAPRM 1171
[198][TOP]
>UniRef100_UPI00017B4CC9 UPI00017B4CC9 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B4CC9
Length = 1147
Score = 159 bits (401), Expect = 2e-37
Identities = 71/131 (54%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1014 IFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1073
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CGL+ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1074 QFLKERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1133
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1134 ELMSMSIAPRM 1144
[199][TOP]
>UniRef100_UPI00016DFC9D UPI00016DFC9D related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016DFC9D
Length = 1045
Score = 159 bits (401), Expect = 2e-37
Identities = 71/131 (54%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 912 IFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 971
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CGL+ N + C C+N I+ +++PYACKLLFQ
Sbjct: 972 QFLKERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1031
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1032 ELMSMSIAPRM 1042
[200][TOP]
>UniRef100_Q4T1Y4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon nigroviridis
RepID=Q4T1Y4_TETNG
Length = 1217
Score = 159 bits (401), Expect = 2e-37
Identities = 71/131 (54%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1084 IFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1143
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CGL+ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1144 QFLKERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1203
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1204 ELMSMSIAPRM 1214
[201][TOP]
>UniRef100_Q1L5Z2 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida
RepID=Q1L5Z2_PETHY
Length = 1203
Score = 159 bits (401), Expect = 2e-37
Identities = 73/135 (54%), Positives = 96/135 (71%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1059 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1118
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + + VC+ CGL+ N K C +CKN +I + +PYACKLL Q
Sbjct: 1119 HFLKERLFDQSDAYRIHVCQQCGLIAIANLKKISFECRSCKNKTDIVQVYIPYACKLLIQ 1178
Query: 233 ELQSMNVVPRLKLTE 189
EL SM + PR+ E
Sbjct: 1179 ELMSMAIAPRMLTKE 1193
[202][TOP]
>UniRef100_A9A459 DNA-directed RNA polymerase n=1 Tax=Nitrosopumilus maritimus SCM1
RepID=A9A459_NITMS
Length = 1115
Score = 159 bits (401), Expect = 2e-37
Identities = 72/135 (53%), Positives = 100/135 (74%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+F+G +YYQKL HMV DK+HAR G M+T+QPTEG+++ GGLR GEMERDCLIAYGAS
Sbjct: 979 VFIGVVYYQKLHHMVADKIHARARGQVQMLTKQPTEGRARGGGLRFGEMERDCLIAYGAS 1038
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
M++ +RL+ SD ++ VC CGL+ Y++ K +K VC C + ++++ + YA KLL Q
Sbjct: 1039 MILKDRLLDESDKSDIFVCERCGLVAYHDVKQRKYVCRVCGDKAKVSSVSVAYAFKLLLQ 1098
Query: 233 ELQSMNVVPRLKLTE 189
E+QS+NV PRL + E
Sbjct: 1099 EMQSLNVAPRLLIKE 1113
[203][TOP]
>UniRef100_UPI000194C2A3 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
n=1 Tax=Taeniopygia guttata RepID=UPI000194C2A3
Length = 1174
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1041 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1100
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1101 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1160
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1161 ELMSMSIAPRM 1171
[204][TOP]
>UniRef100_UPI0001795E58 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB2
(RNA polymerase II subunit B2) (DNA-directed RNA
polymerase II subunit B) (RNA polymerase II subunit 2)
(DNA-directed RNA polymerase II 140 kDa polypeptide) n=1
Tax=Equus caballus RepID=UPI0001795E58
Length = 1174
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1041 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1100
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1101 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1160
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1161 ELMSMSIAPRM 1171
[205][TOP]
>UniRef100_UPI0000F2D75F PREDICTED: similar to RNA polymerase II 140 kDa subunit n=1
Tax=Monodelphis domestica RepID=UPI0000F2D75F
Length = 1174
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1041 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1100
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1101 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1160
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1161 ELMSMSIAPRM 1171
[206][TOP]
>UniRef100_UPI0000E20419 PREDICTED: DNA directed RNA polymerase II polypeptide B isoform 1 n=1
Tax=Pan troglodytes RepID=UPI0000E20419
Length = 1099
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 966 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1025
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1026 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1085
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1086 ELMSMSIAPRM 1096
[207][TOP]
>UniRef100_P30876 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=Catarrhini
RepID=RPB2_HUMAN
Length = 1174
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1041 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1100
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1101 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1160
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1161 ELMSMSIAPRM 1171
[208][TOP]
>UniRef100_UPI00005A2A5D PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
17 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5D
Length = 1099
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 966 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1025
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1026 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1085
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1086 ELMSMSIAPRM 1096
[209][TOP]
>UniRef100_UPI00005A2A5C PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
16 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5C
Length = 1173
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1040 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1099
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1100 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1159
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1160 ELMSMSIAPRM 1170
[210][TOP]
>UniRef100_UPI00005A2A5B PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
15 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5B
Length = 1179
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1046 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1105
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1106 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1165
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1166 ELMSMSIAPRM 1176
[211][TOP]
>UniRef100_UPI00005A2A5A PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
14 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5A
Length = 1175
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1042 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1101
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1102 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1161
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1162 ELMSMSIAPRM 1172
[212][TOP]
>UniRef100_UPI00005A2A59 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
13 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A59
Length = 1180
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1047 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1106
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1107 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1166
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1167 ELMSMSIAPRM 1177
[213][TOP]
>UniRef100_UPI00005A2A58 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
12 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A58
Length = 1174
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1041 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1100
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1101 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1160
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1161 ELMSMSIAPRM 1171
[214][TOP]
>UniRef100_UPI00005A2A57 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
11 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A57
Length = 1180
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1047 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1106
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1107 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1166
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1167 ELMSMSIAPRM 1177
[215][TOP]
>UniRef100_UPI00005A2A56 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
10 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A56
Length = 1166
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1033 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1092
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1093 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1152
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1153 ELMSMSIAPRM 1163
[216][TOP]
>UniRef100_UPI00005A2A55 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
9 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A55
Length = 1182
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1049 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1108
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1109 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1168
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1169 ELMSMSIAPRM 1179
[217][TOP]
>UniRef100_UPI00005A2A54 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
8 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A54
Length = 1173
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1040 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1099
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1100 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1159
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1160 ELMSMSIAPRM 1170
[218][TOP]
>UniRef100_UPI00005A2A53 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
7 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A53
Length = 1113
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 980 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1039
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1040 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1099
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1100 ELMSMSIAPRM 1110
[219][TOP]
>UniRef100_UPI00005A2A52 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
6 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A52
Length = 1162
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1029 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1088
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1089 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1148
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1149 ELMSMSIAPRM 1159
[220][TOP]
>UniRef100_UPI00005A2A50 PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide B isoform 4 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A2A50
Length = 221
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 88 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 147
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 148 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 207
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 208 ELMSMSIAPRM 218
[221][TOP]
>UniRef100_UPI0000EB23D9 DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA
polymerase II subunit B2) (DNA-directed RNA polymerase II
subunit B) (RNA polymerase II subunit 2) (DNA-directed
RNA polymerase II 140 kDa polypeptide). n=1 Tax=Canis
lupus familiaris RepID=UPI0000EB23D9
Length = 1176
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1043 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1102
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1103 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1162
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1163 ELMSMSIAPRM 1173
[222][TOP]
>UniRef100_UPI0000ECC4A8 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
Tax=Gallus gallus RepID=UPI0000ECC4A8
Length = 1176
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1043 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1102
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1103 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1162
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1163 ELMSMSIAPRM 1173
[223][TOP]
>UniRef100_UPI00003AD7E4 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
Tax=Gallus gallus RepID=UPI00003AD7E4
Length = 1174
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1041 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1100
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1101 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1160
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1161 ELMSMSIAPRM 1171
[224][TOP]
>UniRef100_Q5ZMN9 DNA-directed RNA polymerase n=1 Tax=Gallus gallus RepID=Q5ZMN9_CHICK
Length = 1174
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1041 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1100
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1101 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1160
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1161 ELMSMSIAPRM 1171
[225][TOP]
>UniRef100_Q9CSL3 Putative uncharacterized protein (Fragment) n=1 Tax=Mus musculus
RepID=Q9CSL3_MOUSE
Length = 112
Score = 158 bits (399), Expect = 4e-37
Identities = 74/115 (64%), Positives = 93/115 (80%)
Frame = -3
Query: 533 ARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCR 354
AR GPR ++TRQPTEG+S++GGLR+GEMERDCLI YGASML+ ERLMISSD FEV VC
Sbjct: 1 ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG 60
Query: 353 ACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQELQSMNVVPRLKLTE 189
CGLLGY + C CK+ +++++++PYACKLLFQELQSMN++PRLKL +
Sbjct: 61 QCGLLGYSGW------CHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLAK 109
[226][TOP]
>UniRef100_A5PJW8 DNA-directed RNA polymerase n=1 Tax=Bos taurus RepID=A5PJW8_BOVIN
Length = 1174
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1041 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1100
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1101 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1160
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1161 ELMSMSIAPRM 1171
[227][TOP]
>UniRef100_B4R0H5 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans
RepID=B4R0H5_DROSI
Length = 1176
Score = 158 bits (399), Expect = 4e-37
Identities = 71/134 (52%), Positives = 96/134 (71%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+F+GP YYQ+LKHMV DK+H+R GP ++ RQP EG++++GGLR GEMERDC I++GA+
Sbjct: 1043 VFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRARDGGLRFGEMERDCQISHGAA 1102
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SDP+ V +C CGL+ N + C +CKN I+ ++LPYA KLLFQ
Sbjct: 1103 QFLRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECKSCKNKTQISQVRLPYAAKLLFQ 1162
Query: 233 ELQSMNVVPRLKLT 192
EL SMN+ PRL +T
Sbjct: 1163 ELMSMNIAPRLMVT 1176
[228][TOP]
>UniRef100_B4DR40 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DR40_HUMAN
Length = 1083
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 950 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1009
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1010 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1069
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1070 ELMSMSIAPRM 1080
[229][TOP]
>UniRef100_B4DHJ3 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DHJ3_HUMAN
Length = 1167
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1034 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1093
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1094 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1153
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1154 ELMSMSIAPRM 1164
[230][TOP]
>UniRef100_B4DH29 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DH29_HUMAN
Length = 1099
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 966 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1025
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1026 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1085
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1086 ELMSMSIAPRM 1096
[231][TOP]
>UniRef100_A8MW88 DNA-directed RNA polymerase (Fragment) n=1 Tax=Homo sapiens
RepID=A8MW88_HUMAN
Length = 1173
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1040 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1099
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1100 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1159
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1160 ELMSMSIAPRM 1170
[232][TOP]
>UniRef100_C4QZQ7 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4QZQ7_PICPG
Length = 1227
Score = 158 bits (399), Expect = 4e-37
Identities = 75/132 (56%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+F GP YYQ+L+HMV DK+HAR GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1085 VFFGPTYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAA 1144
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYY-NYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ ERLM +SD F V VC CGL+ N K + C +CKN NI + +PYA KLLF
Sbjct: 1145 GFLKERLMEASDAFRVHVCGICGLMSVIANLKKNQFECRSCKNKTNIYQLHIPYAAKLLF 1204
Query: 236 QELQSMNVVPRL 201
QEL +MN+ PRL
Sbjct: 1205 QELMAMNIAPRL 1216
[233][TOP]
>UniRef100_A5DVP4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5DVP4_LODEL
Length = 1238
Score = 158 bits (399), Expect = 4e-37
Identities = 75/132 (56%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+F GP YYQ+L+HMV DK+HAR GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1096 VFFGPTYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAA 1155
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYY-NYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ ERLM +SD F V VC CGL+ N K + C +CKN NI + +PYA KLLF
Sbjct: 1156 GFLKERLMEASDAFRVHVCGVCGLMSVIANLKKNQFECRSCKNKTNIYQIHIPYAAKLLF 1215
Query: 236 QELQSMNVVPRL 201
QEL +MN+ PRL
Sbjct: 1216 QELMAMNITPRL 1227
[234][TOP]
>UniRef100_Q8CFI7 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Mus musculus
RepID=RPB2_MOUSE
Length = 1174
Score = 158 bits (399), Expect = 4e-37
Identities = 70/131 (53%), Positives = 96/131 (73%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++ RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1041 IFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1100
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL +SDP++V VC CG++ N + C C+N I+ +++PYACKLLFQ
Sbjct: 1101 QFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQ 1160
Query: 233 ELQSMNVVPRL 201
EL SM++ PR+
Sbjct: 1161 ELMSMSIAPRM 1171
[235][TOP]
>UniRef100_UPI0000221AC5 hypothetical protein CBG18197 n=1 Tax=Caenorhabditis briggsae AF16
RepID=UPI0000221AC5
Length = 1194
Score = 157 bits (398), Expect = 5e-37
Identities = 71/131 (54%), Positives = 93/131 (70%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF GP YYQ+LKHMV DK+H+R GP MM RQP EG++++GGLR GEMERDC I++GA+
Sbjct: 1047 IFFGPTYYQRLKHMVDDKIHSRARGPIQMMNRQPMEGRARDGGLRFGEMERDCQISHGAT 1106
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SDP+ V VC CGL+ N + C C+N ++ +++PYACKLLFQ
Sbjct: 1107 QFLRERLFEVSDPYHVYVCNNCGLIVVANLRTNSFECKACRNKTQVSAVRIPYACKLLFQ 1166
Query: 233 ELQSMNVVPRL 201
EL SM++ PRL
Sbjct: 1167 ELMSMSIAPRL 1177
[236][TOP]
>UniRef100_Q236N3 DNA-directed RNA polymerase n=1 Tax=Tetrahymena thermophila SB210
RepID=Q236N3_TETTH
Length = 1141
Score = 157 bits (398), Expect = 5e-37
Identities = 75/136 (55%), Positives = 99/136 (72%)
Frame = -3
Query: 596 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGA 417
Y+F GP++YQ+LKHMV DK+HAR G +TRQPTEG++K+GGLR+GEMERD L+A+ +
Sbjct: 1006 YVFCGPVFYQRLKHMVADKVHARAKGRVTTLTRQPTEGRAKDGGLRLGEMERDSLLAFAS 1065
Query: 416 SMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
S L+ ERLMISSD F VQVC CG + + N C C+ D ++ + +PYACKLLF
Sbjct: 1066 SNLLIERLMISSDKFSVQVCEKCGFIQHTN------SCKMCQT-DQVSKVVMPYACKLLF 1118
Query: 236 QELQSMNVVPRLKLTE 189
QEL SMN+ P+L L +
Sbjct: 1119 QELLSMNIKPKLNLVD 1134
[237][TOP]
>UniRef100_A8XS50 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae
RepID=A8XS50_CAEBR
Length = 1215
Score = 157 bits (398), Expect = 5e-37
Identities = 71/131 (54%), Positives = 93/131 (70%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF GP YYQ+LKHMV DK+H+R GP MM RQP EG++++GGLR GEMERDC I++GA+
Sbjct: 1068 IFFGPTYYQRLKHMVDDKIHSRARGPIQMMNRQPMEGRARDGGLRFGEMERDCQISHGAT 1127
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SDP+ V VC CGL+ N + C C+N ++ +++PYACKLLFQ
Sbjct: 1128 QFLRERLFEVSDPYHVYVCNNCGLIVVANLRTNSFECKACRNKTQVSAVRIPYACKLLFQ 1187
Query: 233 ELQSMNVVPRL 201
EL SM++ PRL
Sbjct: 1188 ELMSMSIAPRL 1198
[238][TOP]
>UniRef100_A8Q7K3 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8Q7K3_BRUMA
Length = 1185
Score = 157 bits (398), Expect = 5e-37
Identities = 69/134 (51%), Positives = 95/134 (70%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+F+GP YYQ+LKHMV DK+H+R GP MM RQP EG++++GGLR GEMERDC I++GA+
Sbjct: 1052 VFLGPTYYQRLKHMVDDKIHSRARGPVQMMNRQPMEGRARDGGLRFGEMERDCQISHGAA 1111
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SDP+ V +C CGL+ N + C C+N ++ ++PYACKLLFQ
Sbjct: 1112 QFLRERLFEVSDPYHVYICNNCGLIVVANLRTNSFECKACRNKTQVSAFRIPYACKLLFQ 1171
Query: 233 ELQSMNVVPRLKLT 192
EL SM++ PRL ++
Sbjct: 1172 ELMSMSIAPRLMVS 1185
[239][TOP]
>UniRef100_UPI000151B416 hypothetical protein PGUG_02833 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151B416
Length = 1291
Score = 157 bits (397), Expect = 6e-37
Identities = 75/132 (56%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+F GP YYQ+L+HMV DK+HAR GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1149 VFFGPTYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAA 1208
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYY-NYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ ERLM +SD F V VC CGL+ N K + C +CKN NI + +PYA KLLF
Sbjct: 1209 GFLKERLMEASDAFRVHVCGVCGLMSVIANLKKNQFECRSCKNKTNIYQIHIPYAAKLLF 1268
Query: 236 QELQSMNVVPRL 201
QEL +MN+ PRL
Sbjct: 1269 QELMAMNISPRL 1280
[240][TOP]
>UniRef100_A5DHT2 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Pichia
guilliermondii RepID=RPB2_PICGU
Length = 1236
Score = 157 bits (397), Expect = 6e-37
Identities = 75/132 (56%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+F GP YYQ+L+HMV DK+HAR GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1094 VFFGPTYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAA 1153
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYY-NYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ ERLM +SD F V VC CGL+ N K + C +CKN NI + +PYA KLLF
Sbjct: 1154 GFLKERLMEASDAFRVHVCGVCGLMSVIANLKKNQFECRSCKNKTNIYQIHIPYAAKLLF 1213
Query: 236 QELQSMNVVPRL 201
QEL +MN+ PRL
Sbjct: 1214 QELMAMNISPRL 1225
[241][TOP]
>UniRef100_Q5A8Y5 DNA-directed RNA polymerase n=2 Tax=Candida albicans
RepID=Q5A8Y5_CANAL
Length = 1234
Score = 157 bits (396), Expect = 8e-37
Identities = 75/132 (56%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+F GP YYQ+L+HMV DK+HAR GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1092 VFFGPTYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAA 1151
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYY-NYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ ERLM +SD F V VC CGL+ N K + C +CKN NI + +PYA KLLF
Sbjct: 1152 GFLKERLMEASDAFRVHVCGMCGLMSVIANLKKNQFECRSCKNKTNIYQIHIPYAAKLLF 1211
Query: 236 QELQSMNVVPRL 201
QEL +MN+ PRL
Sbjct: 1212 QELMAMNISPRL 1223
[242][TOP]
>UniRef100_C5MEG3 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404
RepID=C5MEG3_CANTT
Length = 1240
Score = 157 bits (396), Expect = 8e-37
Identities = 75/132 (56%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+F GP YYQ+L+HMV DK+HAR GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1098 VFFGPTYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAA 1157
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYY-NYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ ERLM +SD F V VC CGL+ N K + C +CKN NI + +PYA KLLF
Sbjct: 1158 GFLKERLMEASDAFRVHVCGMCGLMSVIANLKKNQFECRSCKNKTNIYQIHIPYAAKLLF 1217
Query: 236 QELQSMNVVPRL 201
QEL +MN+ PRL
Sbjct: 1218 QELMAMNISPRL 1229
[243][TOP]
>UniRef100_C4Y645 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720
RepID=C4Y645_CLAL4
Length = 858
Score = 157 bits (396), Expect = 8e-37
Identities = 75/132 (56%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+F GP YYQ+L+HMV DK+HAR GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 716 VFFGPTYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAA 775
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYY-NYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ ERLM +SD F V VC CGL+ N K + C +CKN NI + +PYA KLLF
Sbjct: 776 GFLKERLMEASDAFRVHVCGICGLMSVIANLKKNQFECRSCKNKTNIYQIHIPYAAKLLF 835
Query: 236 QELQSMNVVPRL 201
QEL +MN+ PRL
Sbjct: 836 QELMAMNISPRL 847
[244][TOP]
>UniRef100_B9W6V2 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9W6V2_CANDC
Length = 1234
Score = 157 bits (396), Expect = 8e-37
Identities = 75/132 (56%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+F GP YYQ+L+HMV DK+HAR GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1092 VFFGPTYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAA 1151
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYY-NYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ ERLM +SD F V VC CGL+ N K + C +CKN NI + +PYA KLLF
Sbjct: 1152 GFLKERLMEASDAFRVHVCGMCGLMSVIANLKKNQFECRSCKNKTNIYQIHIPYAAKLLF 1211
Query: 236 QELQSMNVVPRL 201
QEL +MN+ PRL
Sbjct: 1212 QELMAMNISPRL 1223
[245][TOP]
>UniRef100_B5RV50 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RV50_DEBHA
Length = 1232
Score = 157 bits (396), Expect = 8e-37
Identities = 75/132 (56%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+F GP YYQ+L+HMV DK+HAR GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1090 VFFGPTYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAA 1149
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYY-NYKLKKAVCTTCKNGDNIATMKLPYACKLLF 237
+ ERLM +SD F V VC CGL+ N K + C +CKN NI + +PYA KLLF
Sbjct: 1150 GFLKERLMEASDAFRVHVCGICGLMSVIANLKKNQFECRSCKNKTNIYQIHIPYAAKLLF 1209
Query: 236 QELQSMNVVPRL 201
QEL +MN+ PRL
Sbjct: 1210 QELMAMNISPRL 1221
[246][TOP]
>UniRef100_P08266 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=melanogaster
subgroup RepID=RPB2_DROME
Length = 1176
Score = 157 bits (396), Expect = 8e-37
Identities = 71/134 (52%), Positives = 95/134 (70%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+F+GP YYQ+LKHMV DK+H+R GP ++ RQP EG++++GGLR GEMERDC I++GA+
Sbjct: 1043 VFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRARDGGLRFGEMERDCQISHGAA 1102
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SDP+ V +C CGL+ N + C CKN I+ ++LPYA KLLFQ
Sbjct: 1103 QFLRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECKGCKNKTQISQVRLPYAAKLLFQ 1162
Query: 233 ELQSMNVVPRLKLT 192
EL SMN+ PRL +T
Sbjct: 1163 ELMSMNIAPRLMVT 1176
[247][TOP]
>UniRef100_Q1L5B4 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum
RepID=Q1L5B4_RHOMC
Length = 1207
Score = 156 bits (395), Expect = 1e-36
Identities = 72/131 (54%), Positives = 93/131 (70%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+RG GP ++TRQP EG+S++GGLR GEMERDC+IA+GA+
Sbjct: 1063 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1122
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SD + V VC CG++ N K C CKN +I + +PYACKLL Q
Sbjct: 1123 HFLKERLFDQSDAYRVHVCALCGIVAIANLKKNSFECRHCKNKTDIVQVYIPYACKLLLQ 1182
Query: 233 ELQSMNVVPRL 201
EL +M + PRL
Sbjct: 1183 ELMAMAIAPRL 1193
[248][TOP]
>UniRef100_O96236 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=O96236_PLAF7
Length = 1340
Score = 156 bits (395), Expect = 1e-36
Identities = 73/135 (54%), Positives = 96/135 (71%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+HAR GP M+TRQPTEG+S++GGLR GEMERDC+I++G++
Sbjct: 1205 IFIGPTYYQRLKHMVEDKIHARSRGPLTMITRQPTEGRSRDGGLRFGEMERDCMISHGSA 1264
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
++ ERL SD + V VC CGL + CT C + NI+ + LPYACKLLFQ
Sbjct: 1265 KMLKERLFEESDAYRVHVCDNCGLCCIADINKNAYECTVCNSKTNISQIYLPYACKLLFQ 1324
Query: 233 ELQSMNVVPRLKLTE 189
EL +M + P+L L +
Sbjct: 1325 ELMTMAIYPKLVLED 1339
[249][TOP]
>UniRef100_A9BK63 DNA-directed RNA polymerase n=1 Tax=Cryptophyta RepID=A9BK63_9CRYP
Length = 1222
Score = 156 bits (395), Expect = 1e-36
Identities = 70/131 (53%), Positives = 99/131 (75%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
IF+GP YYQ+LKHMV DK+H+R GP ++TRQP EG+S++GGLR GEMERDC++++GAS
Sbjct: 1087 IFIGPTYYQRLKHMVDDKIHSRARGPVQILTRQPVEGRSRDGGLRFGEMERDCMMSHGAS 1146
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ + +RLM SD F + +C CGL+ N K + C +C N ++I+ +K+PYACKLLFQ
Sbjct: 1147 IFLKDRLMDQSDAFSIFLCDLCGLIAIANPKKRIFECRSCLNRNSISLVKIPYACKLLFQ 1206
Query: 233 ELQSMNVVPRL 201
EL +M + PR+
Sbjct: 1207 ELMAMAIAPRM 1217
[250][TOP]
>UniRef100_UPI0001865901 hypothetical protein BRAFLDRAFT_125505 n=1 Tax=Branchiostoma floridae
RepID=UPI0001865901
Length = 1176
Score = 156 bits (394), Expect = 1e-36
Identities = 70/131 (53%), Positives = 95/131 (72%)
Frame = -3
Query: 593 IFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 414
+F+GP YYQ+LKHMV DK+H+R GP + RQP EG+S++GGLR GEMERDC IA+GA+
Sbjct: 1043 LFIGPTYYQRLKHMVDDKIHSRARGPVQNLNRQPMEGRSRDGGLRFGEMERDCQIAHGAA 1102
Query: 413 MLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQ 234
+ ERL SDP++V VC CGL+ N + + C CKN I+ +++PYACKLLFQ
Sbjct: 1103 QFLRERLFEVSDPYQVHVCNLCGLIAIANLRNQTFECRGCKNKTQISKIRIPYACKLLFQ 1162
Query: 233 ELQSMNVVPRL 201
EL +M++ PR+
Sbjct: 1163 ELMAMSIAPRM 1173