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[1][TOP]
>UniRef100_Q9ZVN9 T7A14.8 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZVN9_ARATH
Length = 421
Score = 194 bits (493), Expect = 3e-48
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD
Sbjct: 335 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 394
Query: 180 IYIHESLHNCPGCESIHRPKSVSLMEE 100
IYIHESLHNCPGCESIHRPKSVSLMEE
Sbjct: 395 IYIHESLHNCPGCESIHRPKSVSLMEE 421
[2][TOP]
>UniRef100_Q0WLZ8 Putative transcription factor n=1 Tax=Arabidopsis thaliana
RepID=Q0WLZ8_ARATH
Length = 196
Score = 194 bits (493), Expect = 3e-48
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD
Sbjct: 110 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 169
Query: 180 IYIHESLHNCPGCESIHRPKSVSLMEE 100
IYIHESLHNCPGCESIHRPKSVSLMEE
Sbjct: 170 IYIHESLHNCPGCESIHRPKSVSLMEE 196
[3][TOP]
>UniRef100_A7NZG2 Chromosome chr6 scaffold_3, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7NZG2_VITVI
Length = 433
Score = 127 bits (318), Expect = 5e-28
Identities = 57/87 (65%), Positives = 67/87 (77%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFPI PFDEV +LS LN+ ++ ++CFGCQ+SL+ GNKP CV C KCK +FCLDCD
Sbjct: 348 HLFPIPPFDEV-SLSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVACPKCKQHFCLDCD 406
Query: 180 IYIHESLHNCPGCESIHRPKSVSLMEE 100
IYIHESLHNCPGCES K VS+ EE
Sbjct: 407 IYIHESLHNCPGCESFRHSKIVSVTEE 433
[4][TOP]
>UniRef100_A5B9J1 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5B9J1_VITVI
Length = 199
Score = 127 bits (318), Expect = 5e-28
Identities = 57/87 (65%), Positives = 67/87 (77%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFPI PFDEV +LS LN+ ++ ++CFGCQ+SL+ GNKP CV C KCK +FCLDCD
Sbjct: 114 HLFPIPPFDEV-SLSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVACPKCKQHFCLDCD 172
Query: 180 IYIHESLHNCPGCESIHRPKSVSLMEE 100
IYIHESLHNCPGCES K VS+ EE
Sbjct: 173 IYIHESLHNCPGCESFRHSKIVSVTEE 199
[5][TOP]
>UniRef100_B9N7M5 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N7M5_POPTR
Length = 412
Score = 119 bits (298), Expect = 1e-25
Identities = 54/76 (71%), Positives = 59/76 (77%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFPIAPFDEV S N+ R+ K+CFGCQQSL+ GNKP V C KCK YFCLDCD
Sbjct: 335 HLFPIAPFDEVKP-SRQNEPHRRSQKTCFGCQQSLVNPGNKPSLQVACPKCKQYFCLDCD 393
Query: 180 IYIHESLHNCPGCESI 133
IYIHESLHNCPGCES+
Sbjct: 394 IYIHESLHNCPGCESL 409
[6][TOP]
>UniRef100_Q7XM94 OSJNBa0043L24.23 protein n=2 Tax=Oryza sativa RepID=Q7XM94_ORYSJ
Length = 432
Score = 100 bits (249), Expect = 5e-20
Identities = 47/77 (61%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNR--RKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLD 187
HLFP+ PFDEV SS++ NR +K G+ C+GCQQS I ++ V C KC +FCLD
Sbjct: 354 HLFPVQPFDEV---SSVHPNRLGQKGGQKCYGCQQSFINPDSQSSLHVRCPKCNQHFCLD 410
Query: 186 CDIYIHESLHNCPGCES 136
CDIYIHESLHNCPGCES
Sbjct: 411 CDIYIHESLHNCPGCES 427
[7][TOP]
>UniRef100_C5YBY0 Putative uncharacterized protein Sb06g022140 n=1 Tax=Sorghum
bicolor RepID=C5YBY0_SORBI
Length = 431
Score = 94.7 bits (234), Expect = 3e-18
Identities = 43/75 (57%), Positives = 52/75 (69%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+APFDEV + + + ++ G+ CF CQQSL + V C KC +FCLDCD
Sbjct: 354 HLFPVAPFDEV---TPVPNRIQRGGQICFSCQQSLFNPDGQSNLHVRCPKCNQHFCLDCD 410
Query: 180 IYIHESLHNCPGCES 136
IYIHESLHNCPGCES
Sbjct: 411 IYIHESLHNCPGCES 425
[8][TOP]
>UniRef100_A9SFF5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SFF5_PHYPA
Length = 394
Score = 94.0 bits (232), Expect = 5e-18
Identities = 43/76 (56%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPC-VTCRKCKHYFCLDC 184
HLFP++PF+EV L+S N R+ L KSC+GC Q L G K + C +C+ +FC DC
Sbjct: 310 HLFPVSPFEEVENLASAN-GRQSLSKSCYGCLQELPTPGGKVKGVRLECPRCRQHFCFDC 368
Query: 183 DIYIHESLHNCPGCES 136
D YIHESLHNCPGCES
Sbjct: 369 DNYIHESLHNCPGCES 384
[9][TOP]
>UniRef100_B4G0C7 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4G0C7_MAIZE
Length = 428
Score = 92.4 bits (228), Expect = 1e-17
Identities = 42/75 (56%), Positives = 51/75 (68%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ PFDEV + + + ++ G+ CF CQQSL + V C KC +FCLDCD
Sbjct: 351 HLFPVPPFDEV---TPVPNRIQRGGQICFSCQQSLYNPDGQSNLHVRCPKCNQHFCLDCD 407
Query: 180 IYIHESLHNCPGCES 136
IYIHESLHNCPGCES
Sbjct: 408 IYIHESLHNCPGCES 422
[10][TOP]
>UniRef100_A3LN57 Predicted protein n=1 Tax=Pichia stipitis RepID=A3LN57_PICST
Length = 489
Score = 77.0 bits (188), Expect = 6e-13
Identities = 37/85 (43%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGC----------QQSLIGAGNKPVPCVTCRK 211
HL P+ PF EVP S N K CFGC +S N C K
Sbjct: 410 HLVPLVPFKEVPVSSKYNS------KHCFGCLLKFPKGVSNTKSKSSLENMTSSRYRCMK 463
Query: 210 CKHYFCLDCDIYIHESLHNCPGCES 136
C H FC+DCD++IHE+LHNCPGCE+
Sbjct: 464 CSHDFCIDCDVFIHETLHNCPGCEN 488
[11][TOP]
>UniRef100_C1DZ00 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1DZ00_9CHLO
Length = 427
Score = 73.2 bits (178), Expect = 9e-12
Identities = 36/79 (45%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Frame = -3
Query: 360 HLFPIAPFD--EVPALSSLNDNRRKLGKSCFGCQQSL--IGA-GNKPVPCVTCRKCKHYF 196
HLFP+APF+ + LND + +CF C GA GN P V C +CK +
Sbjct: 339 HLFPVAPFEVHRPVIMQELNDAAKLDATNCFACNLKFDRSGARGNDDAPSV-CPRCKKIY 397
Query: 195 CLDCDIYIHESLHNCPGCE 139
C CD++IHE LHNCPGCE
Sbjct: 398 CFQCDVFIHEKLHNCPGCE 416
[12][TOP]
>UniRef100_C1N2T6 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N2T6_9CHLO
Length = 404
Score = 72.8 bits (177), Expect = 1e-11
Identities = 37/80 (46%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGC----QQSLIGAGNKPVPCVTCRKCKHYFC 193
HLFP+ PF E L D+ K SCF C ++ N+ P V C KCK FC
Sbjct: 322 HLFPVPPFTEGFGL----DDEGKRHTSCFACYVDFEEGNESTSNENAPSV-CPKCKKTFC 376
Query: 192 LDCDIYIHESLHNCPGCESI 133
CD+YIHE LHNCPGCE +
Sbjct: 377 FVCDVYIHEKLHNCPGCELV 396
[13][TOP]
>UniRef100_A8IDI5 Transcription factor TFIIH, 44 kDa subunit n=1 Tax=Chlamydomonas
reinhardtii RepID=A8IDI5_CHLRE
Length = 413
Score = 70.5 bits (171), Expect = 6e-11
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVT--CRKCKHYFCLD 187
HLFP+ P+ E + + G CFGC + + G K +T C +CK FC +
Sbjct: 339 HLFPVQPYHEDSEVMTTT------GAYCFGCLREVSEPGVKGQLHLTLRCGQCKQVFCFE 392
Query: 186 CDIYIHESLHNCPGCE 139
CD Y+HESLHNCPGCE
Sbjct: 393 CDAYVHESLHNCPGCE 408
[14][TOP]
>UniRef100_Q2M0P7 GA10767 n=1 Tax=Drosophila pseudoobscura pseudoobscura
RepID=Q2M0P7_DROPS
Length = 445
Score = 70.5 bits (171), Expect = 6e-11
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Frame = -3
Query: 360 HLFPIAPFDEVP--ALSSLNDNRRKLGKS---CFGCQQSLIGAGNKPVPCVTCRKCKHYF 196
HLFP+ F+E+P +L + +R G C+ C + + +K V C CK +F
Sbjct: 327 HLFPVPNFEEIPFDSLPKASSDRGGTGTGTTECYACMKLFVPVADKTV--FKCGFCKQFF 384
Query: 195 CLDCDIYIHESLHNCPGCESIHRPKSVSLMEE*ENECVHTSNYKSQ 58
CLDCDI+IH++LH C GC +I P L+ + ++ V S++++Q
Sbjct: 385 CLDCDIFIHDTLHACVGCNTI--PGVDGLVYQQSSKSVSDSHHQAQ 428
[15][TOP]
>UniRef100_B4GRB7 GL24973 n=1 Tax=Drosophila persimilis RepID=B4GRB7_DROPE
Length = 445
Score = 70.5 bits (171), Expect = 6e-11
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Frame = -3
Query: 360 HLFPIAPFDEVP--ALSSLNDNRRKLGKS---CFGCQQSLIGAGNKPVPCVTCRKCKHYF 196
HLFP+ F+E+P +L + +R G C+ C + + +K V C CK +F
Sbjct: 327 HLFPVPNFEEIPFDSLPKASSDRGGTGTGTTECYACMKLFVPVADKTV--FKCGFCKQFF 384
Query: 195 CLDCDIYIHESLHNCPGCESIHRPKSVSLMEE*ENECVHTSNYKSQ 58
CLDCDI+IH++LH C GC +I P L+ + ++ V S++++Q
Sbjct: 385 CLDCDIFIHDTLHACVGCNTI--PGVDGLVYQQSSKSVSDSHHQAQ 428
[16][TOP]
>UniRef100_Q6CNV5 KLLA0E09615p n=1 Tax=Kluyveromyces lactis RepID=Q6CNV5_KLULA
Length = 488
Score = 70.1 bits (170), Expect = 7e-11
Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGA-GNKPVPCVT-----CRKCKHY 199
HL P+ F EVP S + CFGCQ+ NK +T C +C
Sbjct: 406 HLMPLKTFQEVPVSDSFPTDY------CFGCQKRFPTLRNNKTGELLTSSRYRCEECDQD 459
Query: 198 FCLDCDIYIHESLHNCPGCESIHRPKSVSL 109
FC+DCD++IHE+LHNCPGCES +P +V++
Sbjct: 460 FCIDCDVFIHETLHNCPGCES--KPINVNI 487
[17][TOP]
>UniRef100_UPI00019269FF PREDICTED: similar to predicted protein, partial n=1 Tax=Hydra
magnipapillata RepID=UPI00019269FF
Length = 369
Score = 69.7 bits (169), Expect = 1e-10
Identities = 32/75 (42%), Positives = 44/75 (58%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ PF+EV + + + C GCQ++ I A C++CK FC DCD
Sbjct: 300 HLFPLPPFEEVRRIETAANKN----SICQGCQRNCIDA-----IVYICKECKEMFCNDCD 350
Query: 180 IYIHESLHNCPGCES 136
++IHE+LH CPGC S
Sbjct: 351 MFIHETLHTCPGCTS 365
[18][TOP]
>UniRef100_Q7PPS5 AGAP010559-PA n=1 Tax=Anopheles gambiae RepID=Q7PPS5_ANOGA
Length = 421
Score = 69.7 bits (169), Expect = 1e-10
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = -3
Query: 360 HLFPIAPFDEVPALS-SLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDC 184
HLFP+ F+E+P + + R +C+ CQ++L +K V C CK FC+DC
Sbjct: 325 HLFPVPHFNELPLEQVQVQEPRDPPVTNCYACQKTLASGTDKMV--YECDACKQVFCIDC 382
Query: 183 DIYIHESLHNCPGCESI 133
DI+IHE+LH+C GC +I
Sbjct: 383 DIFIHETLHSCVGCTTI 399
[19][TOP]
>UniRef100_UPI00005A020A PREDICTED: similar to TFIIH basal transcription factor complex p44
subunit (Basic transcription factor 2 44 kDa subunit)
(BTF2-p44) (General transcription factor IIH polypeptide
2) isoform 1 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A020A
Length = 395
Score = 68.9 bits (167), Expect = 2e-10
Identities = 34/78 (43%), Positives = 45/78 (57%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ PF E+P L N R C+GCQ L K C C++ FC+DCD
Sbjct: 324 HLFPLDPFQEIP-LEEHNGER-----FCYGCQGEL-----KDQHVYVCAVCQNVFCVDCD 372
Query: 180 IYIHESLHNCPGCESIHR 127
+++H+SLH CPGC IH+
Sbjct: 373 VFVHDSLHCCPGC--IHK 388
[20][TOP]
>UniRef100_UPI000155F776 PREDICTED: similar to General transcription factor IIH subunit 2
(General transcription factor IIH polypeptide 2) (TFIIH
basal transcription factor complex p44 subunit) (Basic
transcription factor 2 44 kDa subunit) (BTF2-p44) n=1
Tax=Equus caballus RepID=UPI000155F776
Length = 395
Score = 68.6 bits (166), Expect = 2e-10
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E+P L N R C+GCQ L K C C+H FC+DCD
Sbjct: 324 HLFPLDAFQEIP-LEEHNGER-----FCYGCQGEL-----KDQHVYICTVCRHVFCVDCD 372
Query: 180 IYIHESLHNCPGC-ESIHRPKSV 115
+++H+SLH CPGC ++ P SV
Sbjct: 373 VFVHDSLHCCPGCVHTMPAPASV 395
[21][TOP]
>UniRef100_UPI000151B18E hypothetical protein PGUG_04942 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151B18E
Length = 488
Score = 68.2 bits (165), Expect = 3e-10
Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPC-----VTCRKCKHYF 196
HL P+ + EVPA G C+GC AG P C C F
Sbjct: 411 HLVPLREYKEVPAADHYE------GTHCYGCLLKFPEAGGPDGPLRASSRYRCPTCARDF 464
Query: 195 CLDCDIYIHESLHNCPGCES 136
C+DCD+++HE+LHNCPGCES
Sbjct: 465 CIDCDVFVHETLHNCPGCES 484
[22][TOP]
>UniRef100_Q6FTA5 Similar to uniprot|Q04673 Saccharomyces cerevisiae YLR005w SSL1 n=1
Tax=Candida glabrata RepID=Q6FTA5_CANGA
Length = 439
Score = 68.2 bits (165), Expect = 3e-10
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSL-IGAGNKPVPCVT-----CRKCKHY 199
HL P+ F EVPA S ++C+ CQ I K +T C +CK+
Sbjct: 360 HLMPLKTFVEVPAAESFPT------ENCYSCQMKFPIIKSQKSNQMLTSSRYRCEECKND 413
Query: 198 FCLDCDIYIHESLHNCPGCES 136
+C+DCD++IHESLH CPGCES
Sbjct: 414 YCIDCDVFIHESLHTCPGCES 434
[23][TOP]
>UniRef100_A5DNU1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DNU1_PICGU
Length = 488
Score = 68.2 bits (165), Expect = 3e-10
Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPC-----VTCRKCKHYF 196
HL P+ + EVPA G C+GC AG P C C F
Sbjct: 411 HLVPLREYKEVPAADHYE------GTHCYGCLLKFPEAGGPDGPLRASSRYRCPTCARDF 464
Query: 195 CLDCDIYIHESLHNCPGCES 136
C+DCD+++HE+LHNCPGCES
Sbjct: 465 CIDCDVFVHETLHNCPGCES 484
[24][TOP]
>UniRef100_UPI000051A964 PREDICTED: similar to Ssl1 CG11115-PA isoform 1 n=1 Tax=Apis
mellifera RepID=UPI000051A964
Length = 405
Score = 67.8 bits (164), Expect = 4e-10
Identities = 31/73 (42%), Positives = 39/73 (53%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
+LFP+ PF EV + + C+GCQ+ K C KC FCLDC+
Sbjct: 325 YLFPVEPFKEVEYRKEVTFEHPSI---CYGCQKIF---SQKDKKVYICNKCNQTFCLDCE 378
Query: 180 IYIHESLHNCPGC 142
I+IHESLH CPGC
Sbjct: 379 IFIHESLHTCPGC 391
[25][TOP]
>UniRef100_B8C051 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B8C051_THAPS
Length = 422
Score = 67.8 bits (164), Expect = 4e-10
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGC--------QQSLIGAGNKPVPCVT--CRK 211
HLFP+ PF+E+ +N +R CFGC S GAG++ + C +
Sbjct: 343 HLFPVRPFEELDEALVINCDR-----CCFGCLKVIGCKPMDSTDGAGDEGESILRFQCPE 397
Query: 210 CKHYFCLDCDIYIHESLHNCPGC 142
C + FC DCD Y+HE+LHNCPGC
Sbjct: 398 CHNAFCPDCDAYLHETLHNCPGC 420
[26][TOP]
>UniRef100_C3YN18 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3YN18_BRAFL
Length = 396
Score = 67.8 bits (164), Expect = 4e-10
Identities = 32/73 (43%), Positives = 43/73 (58%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
H FP+ F E+P L + +L + C GCQ L N PV C +C FC+DCD
Sbjct: 323 HFFPLENFREIP----LEELDAELSRFCTGCQVQL----NGPV-VYCCTRCSRPFCIDCD 373
Query: 180 IYIHESLHNCPGC 142
++IHE+LH+CPGC
Sbjct: 374 LFIHETLHSCPGC 386
[27][TOP]
>UniRef100_C1C2X0 General transcription factor IIH subunit 2 n=1 Tax=Caligus clemensi
RepID=C1C2X0_9MAXI
Length = 397
Score = 67.4 bits (163), Expect = 5e-10
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ PFD+ +SS R CF C + L N+ C +C +C+DCD
Sbjct: 323 HLFPLPPFDQ--QISSSQSIRE-----CFACMRGL----NRESKVFACPQCHKNYCIDCD 371
Query: 180 IYIHESLHNCPGCES 136
I+IHE+LH+CPGC S
Sbjct: 372 IFIHETLHSCPGCAS 386
[28][TOP]
>UniRef100_Q9VNP8 Ssl1 n=1 Tax=Drosophila melanogaster RepID=Q9VNP8_DROME
Length = 438
Score = 67.0 bits (162), Expect = 6e-10
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Frame = -3
Query: 360 HLFPIAPFDEVP--ALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVT--CRKCKHYFC 193
HLFP+ F+E+P A+ + + + + C+GC ++L +K V C CK +FC
Sbjct: 327 HLFPVPNFEELPFEAMPASSSDLTSDVRECYGCAKALGQGVDKVADKVVFRCGFCKQFFC 386
Query: 192 LDCDIYIHESLHNCPGCESI 133
+DCDI+IH++LH C GC +I
Sbjct: 387 VDCDIFIHDTLHACVGCNTI 406
[29][TOP]
>UniRef100_Q6B237 YLR005W n=1 Tax=Saccharomyces cerevisiae RepID=Q6B237_YEAST
Length = 461
Score = 67.0 bits (162), Expect = 6e-10
Identities = 34/81 (41%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSL-IGAGNKPVPCVT-----CRKCKHY 199
HL P+ F EVP + CF CQ I +K +T C CK
Sbjct: 382 HLMPLKTFAEVPTTEKFRS------EDCFSCQSRFPILKNHKNGKLLTSSRYRCEDCKQE 435
Query: 198 FCLDCDIYIHESLHNCPGCES 136
FC+DCD++IHE LHNCPGCES
Sbjct: 436 FCVDCDVFIHEILHNCPGCES 456
[30][TOP]
>UniRef100_B5VMU6 YLR005Wp-like protein n=1 Tax=Saccharomyces cerevisiae AWRI1631
RepID=B5VMU6_YEAS6
Length = 371
Score = 67.0 bits (162), Expect = 6e-10
Identities = 34/81 (41%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSL-IGAGNKPVPCVT-----CRKCKHY 199
HL P+ F EVP + CF CQ I +K +T C CK
Sbjct: 292 HLMPLKTFAEVPTTEKFRS------EDCFSCQSRFPILKNHKNGKLLTSSRYRCEDCKQE 345
Query: 198 FCLDCDIYIHESLHNCPGCES 136
FC+DCD++IHE LHNCPGCES
Sbjct: 346 FCVDCDVFIHEILHNCPGCES 366
[31][TOP]
>UniRef100_Q04673 Suppressor of stem-loop protein 1 n=4 Tax=Saccharomyces cerevisiae
RepID=SSL1_YEAST
Length = 461
Score = 67.0 bits (162), Expect = 6e-10
Identities = 34/81 (41%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSL-IGAGNKPVPCVT-----CRKCKHY 199
HL P+ F EVP + CF CQ I +K +T C CK
Sbjct: 382 HLMPLKTFAEVPTTEKFRS------EDCFSCQSRFPILKNHKNGKLLTSSRYRCEDCKQE 435
Query: 198 FCLDCDIYIHESLHNCPGCES 136
FC+DCD++IHE LHNCPGCES
Sbjct: 436 FCVDCDVFIHEILHNCPGCES 456
[32][TOP]
>UniRef100_UPI0000E208A4 PREDICTED: general transcription factor IIH, polypeptide 2, 44kD
subunit isoform 6 n=1 Tax=Pan troglodytes
RepID=UPI0000E208A4
Length = 338
Score = 66.6 bits (161), Expect = 8e-10
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E+P L N R C+GCQ L K C C++ FC+DCD
Sbjct: 267 HLFPLDAFQEIP-LEEYNGER-----FCYGCQGEL-----KDQHVYVCAVCQNVFCVDCD 315
Query: 180 IYIHESLHNCPGCESIHR 127
+++H+SLH CPGC IH+
Sbjct: 316 VFVHDSLHCCPGC--IHK 331
[33][TOP]
>UniRef100_UPI0000E208A3 PREDICTED: general transcription factor IIH, polypeptide 2, 44kD
subunit isoform 7 n=1 Tax=Pan troglodytes
RepID=UPI0000E208A3
Length = 378
Score = 66.6 bits (161), Expect = 8e-10
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E+P L N R C+GCQ L K C C++ FC+DCD
Sbjct: 307 HLFPLDAFQEIP-LEEYNGER-----FCYGCQGEL-----KDQHVYVCAVCQNVFCVDCD 355
Query: 180 IYIHESLHNCPGCESIHR 127
+++H+SLH CPGC IH+
Sbjct: 356 VFVHDSLHCCPGC--IHK 371
[34][TOP]
>UniRef100_UPI0000E208A2 PREDICTED: general transcription factor IIH, polypeptide 2, 44kD
subunit isoform 11 n=1 Tax=Pan troglodytes
RepID=UPI0000E208A2
Length = 395
Score = 66.6 bits (161), Expect = 8e-10
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E+P L N R C+GCQ L K C C++ FC+DCD
Sbjct: 324 HLFPLDAFQEIP-LEEYNGER-----FCYGCQGEL-----KDQHVYVCAVCQNVFCVDCD 372
Query: 180 IYIHESLHNCPGCESIHR 127
+++H+SLH CPGC IH+
Sbjct: 373 VFVHDSLHCCPGC--IHK 388
[35][TOP]
>UniRef100_UPI0000D9B4BA PREDICTED: general transcription factor IIH, polypeptide 2, 44kD
subunit isoform 3 n=1 Tax=Macaca mulatta
RepID=UPI0000D9B4BA
Length = 395
Score = 66.6 bits (161), Expect = 8e-10
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E+P L N R C+GCQ L K C C++ FC+DCD
Sbjct: 324 HLFPLDAFQEIP-LEEYNGER-----FCYGCQGEL-----KDQHVYVCAVCQNVFCVDCD 372
Query: 180 IYIHESLHNCPGCESIHR 127
+++H+SLH CPGC IH+
Sbjct: 373 VFVHDSLHCCPGC--IHK 388
[36][TOP]
>UniRef100_UPI0000480765 general transcription factor IIH, polypeptide 2B n=1 Tax=Homo
sapiens RepID=UPI0000480765
Length = 395
Score = 66.6 bits (161), Expect = 8e-10
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E+P L N R C+GCQ L K C C++ FC+DCD
Sbjct: 324 HLFPLDAFQEIP-LEEYNGER-----FCYGCQGEL-----KDQHVYVCAVCQNVFCVDCD 372
Query: 180 IYIHESLHNCPGCESIHR 127
+++H+SLH CPGC IH+
Sbjct: 373 VFVHDSLHCCPGC--IHK 388
[37][TOP]
>UniRef100_B4QLB8 GD15058 n=1 Tax=Drosophila simulans RepID=B4QLB8_DROSI
Length = 438
Score = 66.6 bits (161), Expect = 8e-10
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Frame = -3
Query: 360 HLFPIAPFDEVP--ALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVT--CRKCKHYFC 193
HLFP+ F+E+P A+ + + + + C+GC ++L +K V C CK +FC
Sbjct: 327 HLFPVPNFEELPFEAMPASSSDFTSDVRECYGCAKALGQGVDKVADKVVFRCGFCKQFFC 386
Query: 192 LDCDIYIHESLHNCPGCESI 133
+DCDI+IH++LH C GC +I
Sbjct: 387 VDCDIFIHDTLHACVGCNTI 406
[38][TOP]
>UniRef100_B4PIR4 GE22646 n=1 Tax=Drosophila yakuba RepID=B4PIR4_DROYA
Length = 438
Score = 66.6 bits (161), Expect = 8e-10
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Frame = -3
Query: 360 HLFPIAPFDEVP--ALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVT--CRKCKHYFC 193
HLFP+ F+E+P A+ + + + + C+ C ++L + +K V C CK YFC
Sbjct: 327 HLFPVPNFEELPFEAMPASSSDLTSGVRECYACAKALGQSVDKVADKVVYRCGFCKQYFC 386
Query: 192 LDCDIYIHESLHNCPGCESI 133
+DCDI+IH++LH C GC +I
Sbjct: 387 VDCDIFIHDTLHACVGCNTI 406
[39][TOP]
>UniRef100_B7ZW82 GTF2H2C protein n=1 Tax=Homo sapiens RepID=B7ZW82_HUMAN
Length = 338
Score = 66.6 bits (161), Expect = 8e-10
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E+P L N R C+GCQ L K C C++ FC+DCD
Sbjct: 267 HLFPLDAFQEIP-LEEYNGER-----FCYGCQGEL-----KDQHVYVCAVCQNVFCVDCD 315
Query: 180 IYIHESLHNCPGCESIHR 127
+++H+SLH CPGC IH+
Sbjct: 316 VFVHDSLHCCPGC--IHK 331
[40][TOP]
>UniRef100_B9WAJ6 Suppressor of stem-loop protein 1, putative (General transcription
and dna repair factor iih subunit, putative) (Tfiih
subunit, putative) n=1 Tax=Candida dubliniensis CD36
RepID=B9WAJ6_CANDC
Length = 501
Score = 66.6 bits (161), Expect = 8e-10
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 10/85 (11%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSL-----IGAGNKPVPCVT-----CRK 211
HL P+AP+ EV +S + D+ CFGCQ +G K + +T C K
Sbjct: 422 HLVPLAPYKEVK-VSPIYDSTY-----CFGCQLKFPEGVKLGTLKKSLESMTSSRYRCLK 475
Query: 210 CKHYFCLDCDIYIHESLHNCPGCES 136
C FC++CD+++HE LHNCPGCE+
Sbjct: 476 CSQDFCINCDVFVHEVLHNCPGCEN 500
[41][TOP]
>UniRef100_Q13888 General transcription factor IIH subunit 2 n=1 Tax=Homo sapiens
RepID=TF2H2_HUMAN
Length = 395
Score = 66.6 bits (161), Expect = 8e-10
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E+P L N R C+GCQ L K C C++ FC+DCD
Sbjct: 324 HLFPLDAFQEIP-LEEYNGER-----FCYGCQGEL-----KDQHVYVCAVCQNVFCVDCD 372
Query: 180 IYIHESLHNCPGCESIHR 127
+++H+SLH CPGC IH+
Sbjct: 373 VFVHDSLHCCPGC--IHK 388
[42][TOP]
>UniRef100_Q6P1K8 General transcription factor IIH subunit 2-like protein n=1
Tax=Homo sapiens RepID=T2H2L_HUMAN
Length = 395
Score = 66.6 bits (161), Expect = 8e-10
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E+P L N R C+GCQ L K C C++ FC+DCD
Sbjct: 324 HLFPLDAFQEIP-LEEYNGER-----FCYGCQGEL-----KDQHVYVCAVCQNVFCVDCD 372
Query: 180 IYIHESLHNCPGCESIHR 127
+++H+SLH CPGC IH+
Sbjct: 373 VFVHDSLHCCPGC--IHK 388
[43][TOP]
>UniRef100_B4IB56 GM22477 n=1 Tax=Drosophila sechellia RepID=B4IB56_DROSE
Length = 438
Score = 66.2 bits (160), Expect = 1e-09
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Frame = -3
Query: 360 HLFPIAPFDEVP--ALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVT--CRKCKHYFC 193
HLFP+ F+E+P A+ + + + C+GC ++L +K V C CK +FC
Sbjct: 327 HLFPVPNFEELPFEAMPASSSEFTSDVRECYGCAKALGQGVDKVADKVVFRCGFCKQFFC 386
Query: 192 LDCDIYIHESLHNCPGCESI 133
+DCDI+IH++LH C GC +I
Sbjct: 387 VDCDIFIHDTLHACVGCNTI 406
[44][TOP]
>UniRef100_A7A0R0 Transcription initiation factor TFIIH subunit n=1 Tax=Saccharomyces
cerevisiae YJM789 RepID=A7A0R0_YEAS7
Length = 461
Score = 66.2 bits (160), Expect = 1e-09
Identities = 34/81 (41%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSL-IGAGNKPVPCVT-----CRKCKHY 199
HL P+ F EVP + CF CQ I +K +T C CK
Sbjct: 382 HLMPLKTFAEVPTTEKFPS------EDCFSCQSRFPILKNHKNGKLLTSSRYRCEDCKQE 435
Query: 198 FCLDCDIYIHESLHNCPGCES 136
FC+DCD++IHE LHNCPGCES
Sbjct: 436 FCVDCDVFIHEILHNCPGCES 456
[45][TOP]
>UniRef100_Q86KZ2 General transcription factor IIH subunit 2 n=1 Tax=Dictyostelium
discoideum RepID=TF2H2_DICDI
Length = 461
Score = 66.2 bits (160), Expect = 1e-09
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKS--CFGCQQSLIGAGNKPVPCV--TCRKCKHYFC 193
HLF I F+EV N ++L K+ C GC + + K + + +C +C+ FC
Sbjct: 348 HLFQIPLFNEV--------NWKELNKNVTCIGC----LSSSEKSILSLFFSCPRCQEIFC 395
Query: 192 LDCDIYIHESLHNCPGCES 136
LDCD++IHESLHNCPGCE+
Sbjct: 396 LDCDLFIHESLHNCPGCEN 414
[46][TOP]
>UniRef100_B3NEG9 GG16285 n=1 Tax=Drosophila erecta RepID=B3NEG9_DROER
Length = 438
Score = 65.5 bits (158), Expect = 2e-09
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Frame = -3
Query: 360 HLFPIAPFDEVP--ALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVT--CRKCKHYFC 193
HLFP+ F+E+P A+ + + + + C+ C ++L +K V C CK +FC
Sbjct: 327 HLFPVPNFEELPFEAMPASSSDLNNGVRECYACAKALGQGVDKAADKVVFRCGFCKQFFC 386
Query: 192 LDCDIYIHESLHNCPGCESI 133
+DCDI+IH++LH C GC +I
Sbjct: 387 VDCDIFIHDTLHACVGCNTI 406
[47][TOP]
>UniRef100_B0WAT8 TFIIH basal transcription factor complex p44 subunit n=1 Tax=Culex
quinquefasciatus RepID=B0WAT8_CULQU
Length = 411
Score = 65.5 bits (158), Expect = 2e-09
Identities = 29/85 (34%), Positives = 49/85 (57%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ + E+P ++ +C+GCQ+ +K + C C+ +FC+DCD
Sbjct: 324 HLFPVPHYQELPF--------QQQATNCYGCQKLFGETTDKTI--YQCATCRQFFCIDCD 373
Query: 180 IYIHESLHNCPGCESIHRPKSVSLM 106
I++HE++H+C GC +I P SV +
Sbjct: 374 IFVHETMHSCVGCTTI--PASVQAL 396
[48][TOP]
>UniRef100_A7S1M7 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S1M7_NEMVE
Length = 400
Score = 65.5 bits (158), Expect = 2e-09
Identities = 32/73 (43%), Positives = 41/73 (56%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ + EV + + G+ + CQ I K +C +C+H FCLDCD
Sbjct: 322 HLFPLQQYTEVNVPAQIP------GQPPWTCQACQITLTEKTA--CSCPECRHVFCLDCD 373
Query: 180 IYIHESLHNCPGC 142
IYIHESLH CPGC
Sbjct: 374 IYIHESLHTCPGC 386
[49][TOP]
>UniRef100_A0JN27 General transcription factor IIH subunit 2 n=1 Tax=Rattus
norvegicus RepID=TF2H2_RAT
Length = 396
Score = 65.1 bits (157), Expect = 2e-09
Identities = 29/73 (39%), Positives = 40/73 (54%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E+P K + C+GCQ L K C C++ FC+DCD
Sbjct: 325 HLFPLDAFQEIPL------EEYKGERFCYGCQGEL-----KDQHVYVCTVCRNVFCVDCD 373
Query: 180 IYIHESLHNCPGC 142
+++H+SLH CPGC
Sbjct: 374 VFVHDSLHCCPGC 386
[50][TOP]
>UniRef100_B4LDP4 GJ11798 n=1 Tax=Drosophila virilis RepID=B4LDP4_DROVI
Length = 442
Score = 64.7 bits (156), Expect = 3e-09
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLG--KSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLD 187
HLFP+ F+E+P S+ G + C+GC + L +K V C C +FC+D
Sbjct: 327 HLFPVPNFEELP-FESVPPAAPDCGSLRKCYGCIKVLNAQTDKSV--FKCGYCNQFFCID 383
Query: 186 CDIYIHESLHNCPGCESI 133
CDI+IHE+LH C GC +I
Sbjct: 384 CDIFIHETLHACVGCNTI 401
[51][TOP]
>UniRef100_B4J3S1 GH16776 n=1 Tax=Drosophila grimshawi RepID=B4J3S1_DROGR
Length = 443
Score = 64.7 bits (156), Expect = 3e-09
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLG--KSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLD 187
HLFP+ F+E+P S+ G + C+ C + L G +K V C C +FC+D
Sbjct: 327 HLFPVPNFEELP-FESVPPAAPDCGSLRKCYACIKVLNGLTDKSV--FKCGYCNQFFCID 383
Query: 186 CDIYIHESLHNCPGCESI 133
CDI+IHE+LH C GC +I
Sbjct: 384 CDIFIHETLHACVGCNTI 401
[52][TOP]
>UniRef100_Q5ALX0 Putative uncharacterized protein SSL1 n=1 Tax=Candida albicans
RepID=Q5ALX0_CANAL
Length = 507
Score = 64.7 bits (156), Expect = 3e-09
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 10/85 (11%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSL-----IGAGNKPVPCVT-----CRK 211
HL P+AP+ EV +S + D+ CFGCQ +G + +T C K
Sbjct: 428 HLVPLAPYKEVK-VSPIYDSTY-----CFGCQLKFPEGVKLGTHKGTLESMTSSRYRCLK 481
Query: 210 CKHYFCLDCDIYIHESLHNCPGCES 136
C FC++CD+++HE LHNCPGCE+
Sbjct: 482 CSQDFCINCDVFVHEVLHNCPGCEN 506
[53][TOP]
>UniRef100_C4YJA8 Suppressor of stem-loop protein 1 n=1 Tax=Candida albicans
RepID=C4YJA8_CANAL
Length = 472
Score = 64.7 bits (156), Expect = 3e-09
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 10/85 (11%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSL-----IGAGNKPVPCVT-----CRK 211
HL P+AP+ EV +S + D+ CFGCQ +G + +T C K
Sbjct: 393 HLVPLAPYKEVK-VSPIYDSTY-----CFGCQLKFPEGVKLGTHKGTLESMTSSRYRCLK 446
Query: 210 CKHYFCLDCDIYIHESLHNCPGCES 136
C FC++CD+++HE LHNCPGCE+
Sbjct: 447 CSQDFCINCDVFVHEVLHNCPGCEN 471
[54][TOP]
>UniRef100_A5DUU6 Suppressor of stem-loop protein 1 n=1 Tax=Lodderomyces elongisporus
RepID=A5DUU6_LODEL
Length = 509
Score = 64.7 bits (156), Expect = 3e-09
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 16/91 (17%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQ----------------QSLIGAGNKPVP 229
HL P+AP+ EV S+ + + C+GCQ S+I + K
Sbjct: 429 HLVPLAPYVEVEVKSAYDS------EECYGCQLRFPKGVDLKVEKKSLDSMISSRYK--- 479
Query: 228 CVTCRKCKHYFCLDCDIYIHESLHNCPGCES 136
C KCK FC++CD+++HE LHNCPGCE+
Sbjct: 480 ---CPKCKKDFCINCDVFVHEVLHNCPGCEN 507
[55][TOP]
>UniRef100_UPI00015B5144 PREDICTED: similar to btf n=1 Tax=Nasonia vitripennis
RepID=UPI00015B5144
Length = 404
Score = 64.3 bits (155), Expect = 4e-09
Identities = 31/73 (42%), Positives = 39/73 (53%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
+LFPI F E + SC+ CQ++ + K C KCK FCLDC+
Sbjct: 325 YLFPIKHFKE--------EQYEGDPASCYACQKTFVELDKK---VYVCEKCKQTFCLDCE 373
Query: 180 IYIHESLHNCPGC 142
I+IHESLH CPGC
Sbjct: 374 IFIHESLHTCPGC 386
[56][TOP]
>UniRef100_B4N3K4 GK12882 n=1 Tax=Drosophila willistoni RepID=B4N3K4_DROWI
Length = 454
Score = 63.9 bits (154), Expect = 5e-09
Identities = 31/77 (40%), Positives = 41/77 (53%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
H+FP+ F+E+P ++ CF C + L +K V C C FCLDCD
Sbjct: 325 HIFPVPNFEEMP------HDQLPGPTECFSCAKLLATVADKTV--YKCIHCGEVFCLDCD 376
Query: 180 IYIHESLHNCPGCESIH 130
I+IHE+LH C GC S H
Sbjct: 377 IFIHETLHACVGCNSTH 393
[57][TOP]
>UniRef100_Q91YN8 Gtf2h2 protein n=1 Tax=Mus musculus RepID=Q91YN8_MOUSE
Length = 398
Score = 63.5 bits (153), Expect = 7e-09
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E+ SL + + + + C+GCQ L K C C++ FC+DCD
Sbjct: 325 HLFPLDAFQEI----SLEEYKGE--RFCYGCQGEL-----KDQHVYVCTVCQNVFCVDCD 373
Query: 180 IYIHESLHNCPGC-ESIHRPKSVSL 109
+++H+SLH CPGC I P SL
Sbjct: 374 VFVHDSLHCCPGCIHKIPTPSGPSL 398
[58][TOP]
>UniRef100_A7TJ61 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
DSM 70294 RepID=A7TJ61_VANPO
Length = 497
Score = 63.5 bits (153), Expect = 7e-09
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSL-IGAGNKPVPCVT-----CRKCKHY 199
HL P+ F EVP + + +CF CQ + K +T C CK
Sbjct: 419 HLMPLKTFSEVPHTENFPTD------NCFSCQIRFPVLRNQKTGELLTSSRYRCTDCKQD 472
Query: 198 FCLDCDIYIHESLHNCPGCES 136
FC+DCD++IHE LHNCPGCE+
Sbjct: 473 FCIDCDVFIHEVLHNCPGCEA 493
[59][TOP]
>UniRef100_Q2TBV5 General transcription factor IIH subunit 2 n=1 Tax=Bos taurus
RepID=TF2H2_BOVIN
Length = 395
Score = 63.5 bits (153), Expect = 7e-09
Identities = 32/78 (41%), Positives = 43/78 (55%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E+P L N R C+ CQ L K C C++ FC+DCD
Sbjct: 324 HLFPLDAFQEIP-LEEHNGER-----FCYACQGEL-----KDQHVYVCSVCQNVFCVDCD 372
Query: 180 IYIHESLHNCPGCESIHR 127
+++H+SLH CPGC IH+
Sbjct: 373 VFVHDSLHCCPGC--IHK 388
[60][TOP]
>UniRef100_UPI00003BD070 hypothetical protein DEHA0A02035g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BD070
Length = 514
Score = 63.2 bits (152), Expect = 9e-09
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 14/89 (15%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGA---------GNKPVPCVT---- 220
HL P+ + EVP S + C+GC G + +T
Sbjct: 431 HLVPLGDYKEVPVSESYSSTY------CYGCLLKFPSGIKNTDVNEDGKTKMDSLTSSRY 484
Query: 219 -CRKCKHYFCLDCDIYIHESLHNCPGCES 136
C KC++ FC+DCD+++HESLHNCPGCE+
Sbjct: 485 RCGKCQNDFCIDCDVFVHESLHNCPGCEN 513
[61][TOP]
>UniRef100_UPI00015DEAE9 general transcription factor II H, polypeptide 2 n=1 Tax=Mus
musculus RepID=UPI00015DEAE9
Length = 398
Score = 63.2 bits (152), Expect = 9e-09
Identities = 31/78 (39%), Positives = 46/78 (58%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E+ SL + + + + C+GCQ L K C C++ FC+DCD
Sbjct: 325 HLFPLDAFQEI----SLEEYKGE--RFCYGCQGEL-----KDQHVYVCTVCQNVFCVDCD 373
Query: 180 IYIHESLHNCPGCESIHR 127
+++H+SLH CPGC IH+
Sbjct: 374 VFVHDSLHCCPGC--IHK 389
[62][TOP]
>UniRef100_Q7TPV0 General transcription factor II H, polypeptide 2 n=1 Tax=Mus
musculus RepID=Q7TPV0_MOUSE
Length = 396
Score = 63.2 bits (152), Expect = 9e-09
Identities = 31/78 (39%), Positives = 46/78 (58%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E+ SL + + + + C+GCQ L K C C++ FC+DCD
Sbjct: 325 HLFPLDAFQEI----SLEEYKGE--RFCYGCQGEL-----KDQHVYVCTVCQNVFCVDCD 373
Query: 180 IYIHESLHNCPGCESIHR 127
+++H+SLH CPGC IH+
Sbjct: 374 VFVHDSLHCCPGC--IHK 389
[63][TOP]
>UniRef100_Q759D9 ADR338Cp n=1 Tax=Eremothecium gossypii RepID=Q759D9_ASHGO
Length = 469
Score = 63.2 bits (152), Expect = 9e-09
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGN-KPVPCVT-----CRKCKHY 199
HL P+ F E+P ++CF CQ+ N K +T C CK
Sbjct: 391 HLMPLKVFQELPVDIQFPT------ENCFSCQKKFPRLRNYKTQDLLTSSRYRCENCKCD 444
Query: 198 FCLDCDIYIHESLHNCPGCES 136
FC+DCD+++HE LHNCPGCES
Sbjct: 445 FCIDCDVFVHEILHNCPGCES 465
[64][TOP]
>UniRef100_Q6C7M6 YALI0D26862p n=1 Tax=Yarrowia lipolytica RepID=Q6C7M6_YARLI
Length = 496
Score = 63.2 bits (152), Expect = 9e-09
Identities = 33/84 (39%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSL---------IGAGNKPVPCVTCRKC 208
HLFP+APF EVP N K + C GCQ I A C C
Sbjct: 357 HLFPLAPFIEVPC-----KNAHK-SEFCAGCQSKFPVVARDAKNIQADGSMTSRYECPTC 410
Query: 207 KHYFCLDCDIYIHESLHNCPGCES 136
+FC+DCD++ HE LHNC GC++
Sbjct: 411 HSHFCIDCDVFCHEILHNCIGCQA 434
[65][TOP]
>UniRef100_Q6BZG1 DEHA2A01606p n=1 Tax=Debaryomyces hansenii RepID=Q6BZG1_DEBHA
Length = 514
Score = 63.2 bits (152), Expect = 9e-09
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 14/89 (15%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGA---------GNKPVPCVT---- 220
HL P+ + EVP S + C+GC G + +T
Sbjct: 431 HLVPLGDYKEVPVSESYSSTY------CYGCLLKFPSGIKNTDVNEDGKTKMDSLTSSRY 484
Query: 219 -CRKCKHYFCLDCDIYIHESLHNCPGCES 136
C KC++ FC+DCD+++HESLHNCPGCE+
Sbjct: 485 RCGKCQNDFCIDCDVFVHESLHNCPGCEN 513
[66][TOP]
>UniRef100_C7YPR2 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YPR2_NECH7
Length = 469
Score = 63.2 bits (152), Expect = 9e-09
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 19/95 (20%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLI-------------GAGNKPVPCVT 220
HLFP+ + EVP ++ +CF CQ AG KP V+
Sbjct: 356 HLFPLRNWVEVPWANAARS------AACFSCQAPFPEPPKTKAPDKPKEDAGPKPAKGVS 409
Query: 219 ------CRKCKHYFCLDCDIYIHESLHNCPGCESI 133
C C+ +FC+DCD++ HE +HNCPGC+SI
Sbjct: 410 ESGRYACEVCRQHFCIDCDVFAHEVIHNCPGCQSI 444
[67][TOP]
>UniRef100_Q9JIB4 General transcription factor IIH subunit 2 n=1 Tax=Mus musculus
RepID=TF2H2_MOUSE
Length = 396
Score = 63.2 bits (152), Expect = 9e-09
Identities = 31/78 (39%), Positives = 46/78 (58%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E+ SL + + + + C+GCQ L K C C++ FC+DCD
Sbjct: 325 HLFPLDAFQEI----SLEEYKGE--RFCYGCQGEL-----KDQHVYVCTVCQNVFCVDCD 373
Query: 180 IYIHESLHNCPGCESIHR 127
+++H+SLH CPGC IH+
Sbjct: 374 VFVHDSLHCCPGC--IHK 389
[68][TOP]
>UniRef100_Q173R5 Btf n=1 Tax=Aedes aegypti RepID=Q173R5_AEDAE
Length = 408
Score = 62.8 bits (151), Expect = 1e-08
Identities = 31/85 (36%), Positives = 46/85 (54%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E+ + C+GCQ+ + +K V C C+ FC+DCD
Sbjct: 324 HLFPVPHFQEL--------SFEHQASICYGCQKPFTESTDKTV--YQCGTCQQVFCIDCD 373
Query: 180 IYIHESLHNCPGCESIHRPKSVSLM 106
I+IHE++H+C GC +I P SV +
Sbjct: 374 IFIHETMHSCVGCTTI--PSSVQAL 396
[69][TOP]
>UniRef100_C5M5W0 Suppressor of stem-loop protein 1 n=1 Tax=Candida tropicalis
MYA-3404 RepID=C5M5W0_CANTT
Length = 505
Score = 62.8 bits (151), Expect = 1e-08
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSL-----IGAGNKPVPCVT-----CRK 211
HL P+A F EVP + + CFGCQ G + +T C++
Sbjct: 426 HLVPLAQFKEVPVAPVYDS------EFCFGCQLKFPDGVKAGTQKGSLESMTSSRYRCKR 479
Query: 210 CKHYFCLDCDIYIHESLHNCPGCESI 133
C+ FC++CD+++HE LH CPGCE++
Sbjct: 480 CEKSFCINCDVFVHEVLHTCPGCENM 505
[70][TOP]
>UniRef100_B0E6X4 TFIIH basal transcription factor complex p44 subunit, putative n=1
Tax=Entamoeba dispar SAW760 RepID=B0E6X4_ENTDI
Length = 362
Score = 62.4 bits (150), Expect = 2e-08
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = -3
Query: 357 LFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNK----PVPCVTCRKCKHYFCL 190
+FPI PF + + K + CFGC + + K PV C+KC Y+C
Sbjct: 289 MFPIEPFKIITMI--------KPQEKCFGCGKEIDDRIEKKEEEPVNIYQCKKCLKYYCN 340
Query: 189 DCDIYIHESLHNCPGCES 136
+CD +IH+ L+NCPGCES
Sbjct: 341 ECDSFIHDVLYNCPGCES 358
[71][TOP]
>UniRef100_Q5KBR6 RNA polymerase II transcription factor, putative n=1
Tax=Filobasidiella neoformans RepID=Q5KBR6_CRYNE
Length = 460
Score = 62.4 bits (150), Expect = 2e-08
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
Frame = -3
Query: 357 LFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGA------------GNKPVPCVTCR 214
LFP+A + + + + ++CFGC A G P C
Sbjct: 381 LFPVANYGPLSIEDVVESS-----ETCFGCDSEFSDATAINAGVAQVEDGVSPTGRYRCA 435
Query: 213 KCKHYFCLDCDIYIHESLHNCPGC 142
KCKH FC DCD+YIH++LH CPGC
Sbjct: 436 KCKHDFCADCDLYIHDTLHTCPGC 459
[72][TOP]
>UniRef100_Q5KBR5 RNA polymerase II transcription factor, putative n=1
Tax=Filobasidiella neoformans RepID=Q5KBR5_CRYNE
Length = 460
Score = 62.4 bits (150), Expect = 2e-08
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
Frame = -3
Query: 357 LFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGA------------GNKPVPCVTCR 214
LFP+A + + + + ++CFGC A G P C
Sbjct: 381 LFPVANYGPLSIEDVVESS-----ETCFGCDSEFSDATAINAGVAQVEDGVSPTGRYRCA 435
Query: 213 KCKHYFCLDCDIYIHESLHNCPGC 142
KCKH FC DCD+YIH++LH CPGC
Sbjct: 436 KCKHDFCADCDLYIHDTLHTCPGC 459
[73][TOP]
>UniRef100_UPI0000612989 UPI0000612989 related cluster n=1 Tax=Gallus gallus
RepID=UPI0000612989
Length = 397
Score = 62.0 bits (149), Expect = 2e-08
Identities = 27/73 (36%), Positives = 40/73 (54%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E+P + + C GCQ + K C+ CK+ FC++CD
Sbjct: 326 HLFPLDAFQEIPLEEYQGE------RYCQGCQAEI-----KDQNVYICKTCKNAFCVECD 374
Query: 180 IYIHESLHNCPGC 142
+++H+SLH CPGC
Sbjct: 375 VFVHDSLHCCPGC 387
[74][TOP]
>UniRef100_UPI0000E52B7F PREDICTED: similar to basic transcripion factor 2, 44 kD subunit
n=1 Tax=Monodelphis domestica RepID=UPI0000E52B7F
Length = 395
Score = 61.2 bits (147), Expect = 3e-08
Identities = 34/78 (43%), Positives = 42/78 (53%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F EV +L N R C GC L K C C++ FC+DCD
Sbjct: 324 HLFPLDAFQEV-SLEEYNGER-----FCHGCLGEL-----KDQHVYICTVCQNVFCVDCD 372
Query: 180 IYIHESLHNCPGCESIHR 127
++IHESLH CPGC IH+
Sbjct: 373 LFIHESLHCCPGC--IHK 388
[75][TOP]
>UniRef100_C5DQF9 ZYRO0A11176p n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DQF9_ZYGRC
Length = 477
Score = 61.2 bits (147), Expect = 3e-08
Identities = 33/81 (40%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGN-KPVPCVT-----CRKCKHY 199
HL P+ F EVP ++CF CQ N K +T C C
Sbjct: 398 HLMPLKTFSEVPTGQVFPT------ENCFSCQVRFPTVKNHKTGELLTSSRYRCEDCLKD 451
Query: 198 FCLDCDIYIHESLHNCPGCES 136
FC+DCD++IHE LHNCPGCES
Sbjct: 452 FCIDCDVFIHEILHNCPGCES 472
[76][TOP]
>UniRef100_B0D885 Predicted protein (Fragment) n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0D885_LACBS
Length = 396
Score = 61.2 bits (147), Expect = 3e-08
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGA-------GNKPVPCVTCRKCKH 202
HLFP+ P+D +P + D SC C + A G PV C +C H
Sbjct: 320 HLFPVKPYDALP-YGDVTDP----SSSCHACSRPFPTAVSASATEGVSPVGRYKCPECHH 374
Query: 201 YFCLDCDIYIHESLHNCPGC 142
FC DCD+++H+ +H CPGC
Sbjct: 375 DFCADCDVFVHDVIHCCPGC 394
[77][TOP]
>UniRef100_B3MBA0 GF11005 n=1 Tax=Drosophila ananassae RepID=B3MBA0_DROAN
Length = 422
Score = 60.8 bits (146), Expect = 4e-08
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = -3
Query: 360 HLFPIAPFDEVP--ALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLD 187
HL P+ F+EV ++ +++ + K C+ C + L +K + C C+ +FC+D
Sbjct: 327 HLIPVPNFEEVTLDSMPTVSSDYNGGVKECYACAKVLTFVADKSI--FKCGFCQQFFCID 384
Query: 186 CDIYIHESLHNCPGCESI 133
CD +IHE+LH C GC +I
Sbjct: 385 CDAFIHETLHACVGCNTI 402
[78][TOP]
>UniRef100_C5DCG2 KLTH0B02794p n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DCG2_LACTC
Length = 470
Score = 60.8 bits (146), Expect = 4e-08
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVT------CRKCKHY 199
HL P+ F EV + + +C+ CQ+ N+ + C C
Sbjct: 391 HLMPLKTFQEVDVAETFPTD------TCYSCQKRFPRLKNQKTQELLTSSRYRCADCHQD 444
Query: 198 FCLDCDIYIHESLHNCPGCES 136
FC+DCD++IHE LHNCPGCES
Sbjct: 445 FCIDCDVFIHEILHNCPGCES 465
[79][TOP]
>UniRef100_A4R2B9 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea
RepID=A4R2B9_MAGGR
Length = 516
Score = 60.8 bits (146), Expect = 4e-08
Identities = 38/115 (33%), Positives = 48/115 (41%), Gaps = 40/115 (34%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNK------------------- 238
HLFP+ + EVP ND R + SCF C A NK
Sbjct: 374 HLFPLKIWSEVP----WNDAVRSV--SCFACHAPFPDAKNKDADKGKDAEKDPGDKHLKV 427
Query: 237 --------------PVPC-------VTCRKCKHYFCLDCDIYIHESLHNCPGCES 136
PVP C+ C+H+FC+DCD++ HE LHNCPGC+S
Sbjct: 428 PSKDTNGKKKKPAAPVPKGVSESGRYMCQVCRHHFCIDCDVFSHEVLHNCPGCQS 482
[80][TOP]
>UniRef100_UPI0000D8F246 PREDICTED: similar to basic transcripion factor 2, 44 kD subunit
n=1 Tax=Monodelphis domestica RepID=UPI0000D8F246
Length = 395
Score = 60.5 bits (145), Expect = 6e-08
Identities = 34/78 (43%), Positives = 42/78 (53%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F EV +L N R C GC L K C C++ FC+DCD
Sbjct: 324 HLFPLDAFQEV-SLEEYNGER-----FCQGCLGEL-----KDQHVYICTVCQNVFCVDCD 372
Query: 180 IYIHESLHNCPGCESIHR 127
++IHESLH CPGC IH+
Sbjct: 373 LFIHESLHCCPGC--IHK 388
[81][TOP]
>UniRef100_Q7ZVV4 General transcription factor IIH, polypeptide 2 n=1 Tax=Danio rerio
RepID=Q7ZVV4_DANRE
Length = 392
Score = 60.5 bits (145), Expect = 6e-08
Identities = 32/76 (42%), Positives = 38/76 (50%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E P L R C CQ L K TC CK FC++CD
Sbjct: 324 HLFPLEAFQETP-LEEYEGER-----FCEACQGEL-----KDKSVFTCLACKKVFCVECD 372
Query: 180 IYIHESLHNCPGCESI 133
I+IH++LH CPGC I
Sbjct: 373 IFIHDTLHCCPGCMQI 388
[82][TOP]
>UniRef100_B4KYL1 GI13436 n=1 Tax=Drosophila mojavensis RepID=B4KYL1_DROMO
Length = 461
Score = 60.5 bits (145), Expect = 6e-08
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = -3
Query: 360 HLFPIAPFDE-----VPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYF 196
HLFP+ F+E VP S + RK C+ C + L +K V C C +F
Sbjct: 327 HLFPVPNFEELSYDMVPPASPDCGSLRK----CYACIKVLNPVTDKSV--FKCGYCNQFF 380
Query: 195 CLDCDIYIHESLHNCPGCESI 133
C+DCDI+IHE+LH C GC +I
Sbjct: 381 CIDCDIFIHETLHACVGCNTI 401
[83][TOP]
>UniRef100_C4Y542 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y542_CLAL4
Length = 459
Score = 60.5 bits (145), Expect = 6e-08
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = -3
Query: 318 SSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCDIYIHESLHNCPGCE 139
+S ND+ + CFGC GA C C + FC+DCD+++HE LHNCPGCE
Sbjct: 399 NSNNDSSGNSSERCFGCLAQGDGALGARYACAACGQ---RFCIDCDVFVHEVLHNCPGCE 455
Query: 138 S 136
+
Sbjct: 456 A 456
[84][TOP]
>UniRef100_UPI0000E482AE PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI0000E482AE
Length = 476
Score = 60.1 bits (144), Expect = 8e-08
Identities = 30/81 (37%), Positives = 41/81 (50%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F+E D+ C GCQ + + C KC + FCLDC+
Sbjct: 392 HLFPLDRFEEFKR----EDHDHPDSLFCQGCQSHI-----RDQTAYRCPKCSNVFCLDCE 442
Query: 180 IYIHESLHNCPGCESIHRPKS 118
++I ESLH+CPGC S +S
Sbjct: 443 LFIQESLHSCPGCASTRPSQS 463
[85][TOP]
>UniRef100_UPI00005871E6 PREDICTED: similar to basic transcripion factor 2, 44 kD subunit
n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI00005871E6
Length = 250
Score = 60.1 bits (144), Expect = 8e-08
Identities = 30/81 (37%), Positives = 41/81 (50%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F+E D+ C GCQ + + C KC + FCLDC+
Sbjct: 166 HLFPLDRFEEFKR----EDHDHPDSLFCQGCQSHI-----RDQTAYRCPKCSNVFCLDCE 216
Query: 180 IYIHESLHNCPGCESIHRPKS 118
++I ESLH+CPGC S +S
Sbjct: 217 LFIQESLHSCPGCASTRPSQS 237
[86][TOP]
>UniRef100_C4LV67 TFIIH basal transcription factor complex subunit, putative n=1
Tax=Entamoeba histolytica HM-1:IMSS RepID=C4LV67_ENTHI
Length = 363
Score = 59.3 bits (142), Expect = 1e-07
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = -3
Query: 357 LFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKP----VPCVTCRKCKHYFCL 190
+FPI PF + + K + CFGC + + K V C+KC Y+C
Sbjct: 289 MFPIEPFKVIAMI--------KPQEKCFGCGKEIDDRIEKKEEETVNVYQCKKCLKYYCD 340
Query: 189 DCDIYIHESLHNCPGCES 136
+CD +IH+ L+NCPGCES
Sbjct: 341 ECDSFIHDVLYNCPGCES 358
[87][TOP]
>UniRef100_C5P7V1 TFIIH basal transcription factor complex p47 subunit , putative n=1
Tax=Coccidioides posadasii C735 delta SOWgp
RepID=C5P7V1_COCP7
Length = 471
Score = 59.3 bits (142), Expect = 1e-07
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 19/94 (20%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPC--------------- 226
HLFP+ + EVP N+ + +CF C G PVP
Sbjct: 361 HLFPLINWVEVPW------NKASISSNCFAC-----GNPFPPVPVRAQWETRGGTVKGMS 409
Query: 225 ----VTCRKCKHYFCLDCDIYIHESLHNCPGCES 136
C C ++FC+DCD++ HE +HNCPGC+S
Sbjct: 410 VSSRYECTVCHNHFCIDCDVFAHEIVHNCPGCQS 443
[88][TOP]
>UniRef100_C5FIA5 Suppressor of stem-loop protein 1 n=1 Tax=Microsporum canis CBS
113480 RepID=C5FIA5_NANOT
Length = 484
Score = 58.9 bits (141), Expect = 2e-07
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 14/89 (15%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGC--------------QQSLIGAGNKPVPCV 223
HLFP+ + EVP R SCF C +Q G
Sbjct: 368 HLFPLINWVEVPW------KRASKSVSCFACGNVFPPVPPREKWDRQEGSVKGMSVSSRY 421
Query: 222 TCRKCKHYFCLDCDIYIHESLHNCPGCES 136
C C H+FC+DCD++ HE +HNCPGC+S
Sbjct: 422 ECTVCHHHFCIDCDVFAHEIVHNCPGCQS 450
[89][TOP]
>UniRef100_C0P0D6 Transcription factor TFIIH complex subunit Ssl1 n=1 Tax=Ajellomyces
capsulatus G186AR RepID=C0P0D6_AJECG
Length = 467
Score = 58.5 bits (140), Expect = 2e-07
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 18/93 (19%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGC------------------QQSLIGAGNKP 235
HLFP+ + EV S RK SCF C ++ +G G
Sbjct: 359 HLFPLMNWVEV----SWRRAARKRSASCFACGVGFPRMPKLVSGEPEETAKAAVGVGVSV 414
Query: 234 VPCVTCRKCKHYFCLDCDIYIHESLHNCPGCES 136
C C+ +FC+DCD++ HE +HNCPGC+S
Sbjct: 415 SGRYECPVCECHFCIDCDVFAHEVVHNCPGCQS 447
[90][TOP]
>UniRef100_A6R9E3 Suppressor of stem-loop protein 1 n=1 Tax=Ajellomyces capsulatus
NAm1 RepID=A6R9E3_AJECN
Length = 506
Score = 58.5 bits (140), Expect = 2e-07
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 18/93 (19%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGC------------------QQSLIGAGNKP 235
HLFP+ + EV S RK SCF C ++ +G G
Sbjct: 398 HLFPLMNWVEV----SWRRAARKRSASCFACGVGFPRMPKLVSGEPEETAKAAVGVGVSV 453
Query: 234 VPCVTCRKCKHYFCLDCDIYIHESLHNCPGCES 136
C C+ +FC+DCD++ HE +HNCPGC+S
Sbjct: 454 SGRYECPVCECHFCIDCDVFAHEVVHNCPGCQS 486
[91][TOP]
>UniRef100_C6HGL3 Transcription factor TFIIH complex subunit Ssl1 n=1 Tax=Ajellomyces
capsulatus H143 RepID=C6HGL3_AJECH
Length = 505
Score = 58.2 bits (139), Expect = 3e-07
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 18/93 (19%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGC------------------QQSLIGAGNKP 235
HLFP+ + EV S RK SCF C ++ +G G
Sbjct: 397 HLFPLMNWVEV----SWRRAARKRSASCFACGVGFPRMPKLVSGEPEETAKAALGVGVSV 452
Query: 234 VPCVTCRKCKHYFCLDCDIYIHESLHNCPGCES 136
C C+ +FC+DCD++ HE +HNCPGC+S
Sbjct: 453 SGRYECPVCECHFCIDCDVFAHEVVHNCPGCQS 485
[92][TOP]
>UniRef100_Q4T3D5 Chromosome undetermined SCAF10097, whole genome shotgun sequence
n=2 Tax=Tetraodon nigroviridis RepID=Q4T3D5_TETNG
Length = 395
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/79 (40%), Positives = 39/79 (49%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E A D + C CQ L K TC C FC++CD
Sbjct: 327 HLFPLQVFPESSAEDPPKD------RFCQACQGRL-----KDKSVFTCPSCHSVFCVECD 375
Query: 180 IYIHESLHNCPGCESIHRP 124
++IH+SLH CP C IHRP
Sbjct: 376 LFIHDSLHCCPCC--IHRP 392
[93][TOP]
>UniRef100_A4RYU4 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RYU4_OSTLU
Length = 407
Score = 57.4 bits (137), Expect = 5e-07
Identities = 28/73 (38%), Positives = 36/73 (49%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+APF E + ++ K C C + + P C +C + FC CD
Sbjct: 337 HLFPVAPFKEY----TRDEASAKEVLECKACLALI----KQTDPASKCEQCSNVFCFACD 388
Query: 180 IYIHESLHNCPGC 142
YIHE LHNCP C
Sbjct: 389 CYIHEKLHNCPHC 401
[94][TOP]
>UniRef100_B6HPX4 Pc22g11160 protein n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6HPX4_PENCW
Length = 450
Score = 57.4 bits (137), Expect = 5e-07
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 14/93 (15%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGA--------------GNKPVPCV 223
HLFP+ + EVP R +CF C S G
Sbjct: 347 HLFPLINWVEVPW------RRASRSSACFACGLSFPSVPPEDHWQTAENQTKGMSVSSRY 400
Query: 222 TCRKCKHYFCLDCDIYIHESLHNCPGCESIHRP 124
C C ++FC+DCD++ HE +HNCPGC+S P
Sbjct: 401 ECTACHNHFCIDCDLFAHEVVHNCPGCQSRSNP 433
[95][TOP]
>UniRef100_B7FW75 Suppressor of stem-loop protein 1 n=1 Tax=Phaeodactylum tricornutum
CCAP 1055/1 RepID=B7FW75_PHATR
Length = 413
Score = 57.0 bits (136), Expect = 6e-07
Identities = 30/80 (37%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVT-------CRKCKH 202
HLFP+ PF EV Q N VP V C C
Sbjct: 351 HLFPVPPFREV--------------------QPDTAVVSNSQVPVVASRQLRFACPDCHQ 390
Query: 201 YFCLDCDIYIHESLHNCPGC 142
FC+DCD ++HESLHNCPGC
Sbjct: 391 VFCVDCDAFLHESLHNCPGC 410
[96][TOP]
>UniRef100_O74995 TFIIH basal transcription factor complex p47 subunit n=1
Tax=Schizosaccharomyces pombe RepID=TFH47_SCHPO
Length = 421
Score = 57.0 bits (136), Expect = 6e-07
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVT------CRKCKHY 199
HLFP+ + E+P ++ CF CQ P T C CK++
Sbjct: 344 HLFPLKNWSEIPWSANPKSTH------CFACQLPFPKPPVSPFDESTSSMRYACPSCKNH 397
Query: 198 FCLDCDIYIHESLHNCPGCE 139
FCLDCD++ HE LH C GC+
Sbjct: 398 FCLDCDVFAHEQLHECYGCQ 417
[97][TOP]
>UniRef100_Q2U9W3 RNA polymerase II transcription initiation/nucleotide excision
repair factor TFIIH n=1 Tax=Aspergillus oryzae
RepID=Q2U9W3_ASPOR
Length = 458
Score = 56.6 bits (135), Expect = 8e-07
Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 19/94 (20%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPC--------------- 226
HLFP+ + EVP R CF C G PVP
Sbjct: 350 HLFPLVNWVEVPW------QRASRSSVCFAC-----GIAFPPVPPKDQWQTTENQAKGMS 398
Query: 225 ----VTCRKCKHYFCLDCDIYIHESLHNCPGCES 136
C C+++FC+DCD++ HE +HNCPGC+S
Sbjct: 399 VSSRYECTVCENHFCIDCDLFAHEVVHNCPGCQS 432
[98][TOP]
>UniRef100_A8X9W6 Putative uncharacterized protein n=1 Tax=Caenorhabditis briggsae
RepID=A8X9W6_CAEBR
Length = 376
Score = 56.2 bits (134), Expect = 1e-06
Identities = 27/73 (36%), Positives = 35/73 (47%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HL P+A F ++ SC+ C+ G + C KC+ FCLDCD
Sbjct: 319 HLQPLAAFKQIEVTRG----------SCYACETRFSDEGFR------CEKCRLVFCLDCD 362
Query: 180 IYIHESLHNCPGC 142
+HESLH CPGC
Sbjct: 363 TLLHESLHVCPGC 375
[99][TOP]
>UniRef100_C4QXV7 Component of the core form of RNA polymerase transcription factor
TFIIH n=1 Tax=Pichia pastoris GS115 RepID=C4QXV7_PICPG
Length = 447
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 15/88 (17%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGC---------QQSLIGAGNK------PVPC 226
HLFP+ F EVP S + +CF C + + N+
Sbjct: 364 HLFPLKLFQEVPLAESY------ISTNCFSCLTEFPQGMSESERSNSDNRAKKEFHTSSR 417
Query: 225 VTCRKCKHYFCLDCDIYIHESLHNCPGC 142
C C +FC+DCD+++H+ LHNCPGC
Sbjct: 418 YQCPDCNKHFCVDCDVFVHDVLHNCPGC 445
[100][TOP]
>UniRef100_UPI000069EF63 TFIIH basal transcription factor complex p44 subunit (Basic
transcription factor 2 44 kDa subunit) (BTF2-p44)
(General transcription factor IIH polypeptide 2). n=1
Tax=Xenopus (Silurana) tropicalis RepID=UPI000069EF63
Length = 394
Score = 55.8 bits (133), Expect = 1e-06
Identities = 30/73 (41%), Positives = 39/73 (53%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F EV SL + + + C GC L K C C+ FC++CD
Sbjct: 325 HLFPLDAFKEV----SLEEYEGE--RYCRGCDGEL-----KDQQVYICPVCQCVFCIECD 373
Query: 180 IYIHESLHNCPGC 142
++IHESLH CPGC
Sbjct: 374 LFIHESLHCCPGC 386
[101][TOP]
>UniRef100_Q5XGG8 General transcription factor IIH polypeptide 4, 52kDa n=1
Tax=Xenopus (Silurana) tropicalis RepID=Q5XGG8_XENTR
Length = 393
Score = 55.8 bits (133), Expect = 1e-06
Identities = 30/73 (41%), Positives = 39/73 (53%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F EV SL + + + C GC L K C C+ FC++CD
Sbjct: 324 HLFPLDAFKEV----SLEEYEGE--RYCRGCDGEL-----KDQQVYICPVCQCVFCIECD 372
Query: 180 IYIHESLHNCPGC 142
++IHESLH CPGC
Sbjct: 373 LFIHESLHCCPGC 385
[102][TOP]
>UniRef100_B5DGR9 General transcription factor IIE, polypeptide 2-2 n=1 Tax=Salmo
salar RepID=B5DGR9_SALSA
Length = 393
Score = 55.8 bits (133), Expect = 1e-06
Identities = 27/73 (36%), Positives = 36/73 (49%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E P L + + C CQ L K TC C FC++CD
Sbjct: 325 HLFPLEAFQESPLLLHHRE------RFCEACQGEL-----KDRSVFTCPSCSSVFCVECD 373
Query: 180 IYIHESLHNCPGC 142
++IH++LH CP C
Sbjct: 374 LFIHDTLHCCPSC 386
[103][TOP]
>UniRef100_C4Q4F1 Btf, putative n=1 Tax=Schistosoma mansoni RepID=C4Q4F1_SCHMA
Length = 423
Score = 55.8 bits (133), Expect = 1e-06
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 17/90 (18%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLN----DNRRKLGKS-------------CFGCQQSLIGAGNKPV 232
HLFP+ F+ V S + DN+ K ++ CFGC + +
Sbjct: 334 HLFPLDLFEPVNGSGSFSETSLDNQEKSKETIDSADSVDHQQRLCFGCNVII----PSKI 389
Query: 231 PCVTCRKCKHYFCLDCDIYIHESLHNCPGC 142
P C KCK FC CD +H+S+H+CPGC
Sbjct: 390 PGYQCPKCKFIFCHSCDAVLHDSIHSCPGC 419
[104][TOP]
>UniRef100_A4DA11 RNA polymerase TFIIH complex subunit Ssl1, putative n=2
Tax=Aspergillus fumigatus RepID=A4DA11_ASPFU
Length = 456
Score = 55.8 bits (133), Expect = 1e-06
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 14/89 (15%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGC-------------QQSLIGAGNKPVPC-V 223
HLFP+ + EVP R +CF C Q + A V
Sbjct: 350 HLFPLMNWIEVPW------QRASRSLTCFACGIYFPTVPPKDQWQATESQAKGMSVSSRY 403
Query: 222 TCRKCKHYFCLDCDIYIHESLHNCPGCES 136
C CK++FC+DCD++ HE +HNCPGC+S
Sbjct: 404 ECTVCKNHFCIDCDLFAHEIVHNCPGCQS 432
[105][TOP]
>UniRef100_P34567 General transcription factor IIH subunit 2 n=1 Tax=Caenorhabditis
elegans RepID=TF2H2_CAEEL
Length = 376
Score = 55.8 bits (133), Expect = 1e-06
Identities = 26/73 (35%), Positives = 36/73 (49%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HL P++ F+++ C+ C+ L G G + C C+ FCLDCD
Sbjct: 319 HLQPLSAFEQIEVTRGF----------CYACETRLSGEGFR------CGSCQLVFCLDCD 362
Query: 180 IYIHESLHNCPGC 142
+HESLH CPGC
Sbjct: 363 TLLHESLHVCPGC 375
[106][TOP]
>UniRef100_UPI000155431D PREDICTED: similar to General transcription factor II H,
polypeptide 2 n=1 Tax=Ornithorhynchus anatinus
RepID=UPI000155431D
Length = 470
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E+ SL + + + C GCQ L K C C+ FC++CD
Sbjct: 399 HLFPLDAFQEI----SLEEYHGE--RVCQGCQGEL-----KDQQVYICTVCQSVFCVECD 447
Query: 180 IYIHESLHNCPGCESIHR-PKSVSL 109
+++H+ LH CPGC IH+ P V L
Sbjct: 448 LFVHDFLHCCPGC--IHKNPTPVGL 470
[107][TOP]
>UniRef100_Q6GR42 MGC81060 protein n=1 Tax=Xenopus laevis RepID=Q6GR42_XENLA
Length = 395
Score = 55.5 bits (132), Expect = 2e-06
Identities = 29/73 (39%), Positives = 37/73 (50%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F EV L + R C GC L K C C+ FC++CD
Sbjct: 324 HLFPLDAFKEV-RLEEYDGERY-----CRGCDGEL-----KDQQVYVCTVCQCVFCIECD 372
Query: 180 IYIHESLHNCPGC 142
+++HESLH CPGC
Sbjct: 373 LFVHESLHCCPGC 385
[108][TOP]
>UniRef100_A1C4Q2 Transcription factor and DNA repair complex, core TFIIH, putative
n=1 Tax=Aspergillus clavatus RepID=A1C4Q2_ASPCL
Length = 456
Score = 55.1 bits (131), Expect = 2e-06
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGC-------------QQSLIGAGNKPVPC-V 223
HLFP+ + EVP + + +CF C Q + A V
Sbjct: 349 HLFPLMNWVEVPWQQASRSS------ACFACGVYFPAVPPNDQWQTTESQAKGMSVSSRY 402
Query: 222 TCRKCKHYFCLDCDIYIHESLHNCPGCES 136
C CK++FC+DCD++ HE +HNCPGC+S
Sbjct: 403 ECTVCKNHFCIDCDLFAHEVVHNCPGCQS 431
[109][TOP]
>UniRef100_Q017B7 Basic transcription factor 2, 44kD subunit-related (ISS) n=1
Tax=Ostreococcus tauri RepID=Q017B7_OSTTA
Length = 414
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/73 (35%), Positives = 33/73 (45%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E + + + C C S+ A C C + FC CD
Sbjct: 333 HLFPVPAFKEYASRNVSAKESGIVALECSACLASITDASLAS----ECEHCSNVFCFACD 388
Query: 180 IYIHESLHNCPGC 142
I+IHE LHNCP C
Sbjct: 389 IFIHERLHNCPHC 401
[110][TOP]
>UniRef100_B6JWI3 Transcription factor TFIIH complex subunit Ssl1 n=1
Tax=Schizosaccharomyces japonicus yFS275
RepID=B6JWI3_SCHJY
Length = 422
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAG------NKPVPCVTCRKCKHY 199
HLFP+ + E+P + + CF CQ N C C H+
Sbjct: 345 HLFPLKNWREIPW------SEKPTSTYCFACQAPFPMTPQAKEDQNASSSRYACPSCGHH 398
Query: 198 FCLDCDIYIHESLHNCPGCES 136
FC++CD++ HE LH C GC+S
Sbjct: 399 FCIECDVFAHEQLHECFGCQS 419
[111][TOP]
>UniRef100_B2B1C8 Predicted CDS Pa_3_8890 n=1 Tax=Podospora anserina
RepID=B2B1C8_PODAN
Length = 501
Score = 54.3 bits (129), Expect = 4e-06
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -3
Query: 219 CRKCKHYFCLDCDIYIHESLHNCPGC 142
C +C+ +FC+DCDIY HE++HNCPGC
Sbjct: 450 CPECEEHFCIDCDIYAHETIHNCPGC 475
[112][TOP]
>UniRef100_UPI000186D2CB TFIIH basal transcription factor complex p44 subunit, putative n=1
Tax=Pediculus humanus corporis RepID=UPI000186D2CB
Length = 401
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/73 (36%), Positives = 35/73 (47%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F+ D + G CFGCQ+ C KC+ FC CD
Sbjct: 321 HLFPVQSFERF-------DGKNAEGY-CFGCQKKF---SEGDTYLYKCNKCEQRFCGVCD 369
Query: 180 IYIHESLHNCPGC 142
I++H+SL CPGC
Sbjct: 370 IFVHDSLRTCPGC 382
[113][TOP]
>UniRef100_UPI00016E0918 UPI00016E0918 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E0918
Length = 392
Score = 53.9 bits (128), Expect = 5e-06
Identities = 30/78 (38%), Positives = 39/78 (50%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCD 181
HLFP+ F E PA + + +SC C L K +C C FC+DC
Sbjct: 324 HLFPLQVFTESPA------DDLQTERSCQACHGEL-----KDKSVFSCPSCLSVFCVDCH 372
Query: 180 IYIHESLHNCPGCESIHR 127
++IH+SLH CP C IHR
Sbjct: 373 LFIHDSLHCCPCC--IHR 388
[114][TOP]
>UniRef100_UPI0001791FC5 PREDICTED: similar to General transcription factor II H,
polypeptide 2 n=1 Tax=Acyrthosiphon pisum
RepID=UPI0001791FC5
Length = 388
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSL-IGAGNKPVPCVTCRKCKHYFCLDC 184
HL PI PF ++ + C+GC++ + + A N C CK ++C C
Sbjct: 318 HLVPIKPFIKI-------ELEEGSSAYCYGCRKRIKVPAEN----VYFCESCKKHYCDGC 366
Query: 183 DIYIHESLHNCPGC 142
DIY+H +LH CPGC
Sbjct: 367 DIYVHNTLHVCPGC 380
[115][TOP]
>UniRef100_UPI000023DE85 hypothetical protein FG06002.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023DE85
Length = 469
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = -3
Query: 348 IAPFDEVPALSSLNDNRRKLG--KSCFGCQQSLIGAGNKPVPCVTCRKCKHYFCLDCDIY 175
+APF E P + ++ G K+ G +S A C C +FC+DCD++
Sbjct: 378 LAPFPEPPKNKGHDKSKEDSGAPKTAKGVSESGRYA---------CEVCGQHFCIDCDVF 428
Query: 174 IHESLHNCPGCESI 133
HE +HNCPGC+S+
Sbjct: 429 AHEVVHNCPGCQSL 442
[116][TOP]
>UniRef100_C4WY63 ACYPI003683 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WY63_ACYPI
Length = 245
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSL-IGAGNKPVPCVTCRKCKHYFCLDC 184
HL PI PF ++ + C+GC++ + + A N C CK ++C C
Sbjct: 175 HLVPIKPFIKI-------ELEEGSSAYCYGCRKRIKVPAEN----VYFCESCKKHYCDGC 223
Query: 183 DIYIHESLHNCPGC 142
DIY+H +LH CPGC
Sbjct: 224 DIYVHNTLHVCPGC 237
[117][TOP]
>UniRef100_C8V3Z3 Component of the core form of RNA polymerase transcription factor
TFIIH (Eurofung) n=1 Tax=Aspergillus nidulans FGSC A4
RepID=C8V3Z3_EMENI
Length = 455
Score = 53.1 bits (126), Expect = 9e-06
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Frame = -3
Query: 360 HLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSL--------------IGAGNKPVPCV 223
HLFP+ + EV + R +CF C + + G
Sbjct: 349 HLFPLMNWVEV------SWERAHRSTTCFACGIAFPTIPPKEQWQATQNLAKGMSVSSRY 402
Query: 222 TCRKCKHYFCLDCDIYIHESLHNCPGCES 136
C C+++FC+DCD++ HE +HNCPGC+S
Sbjct: 403 ECTVCENHFCIDCDLFAHEVVHNCPGCQS 431