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[1][TOP]
>UniRef100_Q9LUW5 DEAD-box ATP-dependent RNA helicase 53 n=1 Tax=Arabidopsis thaliana
RepID=RH53_ARATH
Length = 616
Score = 160 bits (405), Expect = 4e-38
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = +1
Query: 1 DSDRSGFGSFGMRSPEGYGSDRSSQSGGRSSFGGGRSGGSSNNRSSGFGDFGSDRSSQSG 180
DSDRSGFGSFGMRSPEGYGSDRSSQSGGRSSFGGGRSGGSSNNRSSGFGDFGSDRSSQSG
Sbjct: 540 DSDRSGFGSFGMRSPEGYGSDRSSQSGGRSSFGGGRSGGSSNNRSSGFGDFGSDRSSQSG 599
Query: 181 GRSSFGGFGSNDGKRSY 231
GRSSFGGFGSNDGKRSY
Sbjct: 600 GRSSFGGFGSNDGKRSY 616
[2][TOP]
>UniRef100_Q9LUW6 DEAD-box ATP-dependent RNA helicase 9 n=1 Tax=Arabidopsis thaliana
RepID=RH9_ARATH
Length = 610
Score = 84.3 bits (207), Expect = 4e-15
Identities = 52/91 (57%), Positives = 56/91 (61%), Gaps = 15/91 (16%)
Frame = +1
Query: 4 SDRSGFGSFGMRSPEGYGSDRSSQSGGRSSFGGGRSGGSSN------NRSSGFGDFGS-- 159
S RSG GS+G GYG GG S+GG SGGSS+ +RSSGFG FGS
Sbjct: 527 SGRSGGGSYG-----GYGGSSGRSGGGGGSYGG--SGGSSSRYSGGSDRSSGFGSFGSGG 579
Query: 160 -------DRSSQSGGRSSFGGFGSNDGKRSY 231
DRSSQS GRSSFGGFGSNDGKRSY
Sbjct: 580 SSGGFGSDRSSQSSGRSSFGGFGSNDGKRSY 610
[3][TOP]
>UniRef100_UPI00005BEF27 PREDICTED: similar to TAF15 RNA polymerase II, TATA box binding
protein (TBP)-associated factor isoform 2 n=1 Tax=Bos
taurus RepID=UPI00005BEF27
Length = 589
Score = 59.3 bits (142), Expect = 1e-07
Identities = 32/71 (45%), Positives = 37/71 (52%)
Frame = +1
Query: 7 DRSGFGSFGMRSPEGYGSDRSSQSGGRSSFGGGRSGGSSNNRSSGFGDFGSDRSSQSGGR 186
DR G+G G R GYG DR G R +GG RSGG G G +G DRS GG
Sbjct: 494 DRGGYG--GDRG--GYGGDRGGYGGDRGGYGGDRSGGGYGGDRGGSGGYGGDRSGGYGGD 549
Query: 187 SSFGGFGSNDG 219
S GG+G + G
Sbjct: 550 RSGGGYGGDRG 560
[4][TOP]
>UniRef100_Q12UP5 Dead box RNA helicase n=2 Tax=Methanococcoides burtonii
RepID=Q12UP5_METBU
Length = 522
Score = 56.2 bits (134), Expect = 1e-06
Identities = 46/83 (55%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
Frame = +1
Query: 4 SDRSGFGSFGMRSPEGYGSDRSS--QSGGRSS--FGGGRSGGSSNNRSSGFGDFG--SDR 165
SDRS GS G RS SDRSS SGGRSS GG SGG S++RSSG G SDR
Sbjct: 417 SDRSSGGSSGGRS-----SDRSSGGSSGGRSSDRSSGGSSGGRSSDRSSGGSSGGRSSDR 471
Query: 166 SS--QSGGRSSFGGFGSNDGKRS 228
SS SGGRSS G + G RS
Sbjct: 472 SSGGSSGGRSSDRSSGGSSGGRS 494
Score = 54.3 bits (129), Expect = 4e-06
Identities = 44/83 (53%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
Frame = +1
Query: 4 SDRSGFGSFGMRSPEGYGSDRSS--QSGGRSS--FGGGRSGGSSNNRSSG--FGDFGSDR 165
SDRS GS G RS SDRSS SGGRSS GG SGG S++RSSG G SDR
Sbjct: 430 SDRSSGGSSGGRS-----SDRSSGGSSGGRSSDRSSGGSSGGRSSDRSSGGSSGGRSSDR 484
Query: 166 SS--QSGGRSSFGGFGSNDGKRS 228
SS SGGRSS G + G ++
Sbjct: 485 SSGGSSGGRSSDRSSGGSSGDKA 507
[5][TOP]
>UniRef100_UPI0001796C82 PREDICTED: similar to TBP-associated factor 15 n=1 Tax=Equus
caballus RepID=UPI0001796C82
Length = 586
Score = 55.5 bits (132), Expect = 2e-06
Identities = 31/71 (43%), Positives = 36/71 (50%)
Frame = +1
Query: 7 DRSGFGSFGMRSPEGYGSDRSSQSGGRSSFGGGRSGGSSNNRSSGFGDFGSDRSSQSGGR 186
DR G+G G R GYG DR G R +GG RSGG G G + DRS GG
Sbjct: 491 DRGGYG--GDRG--GYGGDRGGYGGDRGGYGGDRSGGGYGGDRGGGGGYCGDRSGGYGGD 546
Query: 187 SSFGGFGSNDG 219
S GG+G + G
Sbjct: 547 RSGGGYGGDRG 557
[6][TOP]
>UniRef100_UPI0000E2480D PREDICTED: similar to putative RNA binding protein RBP56 n=1
Tax=Pan troglodytes RepID=UPI0000E2480D
Length = 580
Score = 53.9 bits (128), Expect = 5e-06
Identities = 33/72 (45%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 7 DRSGFGSFGMRSPEGYGSDRSSQSGGRSSFGGGRS-GGSSNNRSSGFGDFGSDRSSQSGG 183
DR G+G G R GYG DR G R +GG RS GG +R G G +G DRS GG
Sbjct: 497 DRGGYG--GDRG--GYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSG-YGGDRSGGYGG 551
Query: 184 RSSFGGFGSNDG 219
S GG+G + G
Sbjct: 552 DRSGGGYGGDRG 563
[7][TOP]
>UniRef100_UPI0000D9E25E PREDICTED: similar to TBP-associated factor 15 isoform 1 isoform 2
n=1 Tax=Macaca mulatta RepID=UPI0000D9E25E
Length = 584
Score = 53.9 bits (128), Expect = 5e-06
Identities = 33/72 (45%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 7 DRSGFGSFGMRSPEGYGSDRSSQSGGRSSFGGGRS-GGSSNNRSSGFGDFGSDRSSQSGG 183
DR G+G G R GYG DR G R +GG RS GG +R G G +G DRS GG
Sbjct: 489 DRGGYG--GDRG--GYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSG-YGGDRSGGYGG 543
Query: 184 RSSFGGFGSNDG 219
S GG+G + G
Sbjct: 544 DRSGGGYGGDRG 555
[8][TOP]
>UniRef100_UPI0000500E38 similar to TAF15 RNA polymerase II, TATA box binding protein
(TBP)-associated factor (LOC364872), mRNA n=1 Tax=Rattus
norvegicus RepID=UPI0000500E38
Length = 554
Score = 53.9 bits (128), Expect = 5e-06
Identities = 31/69 (44%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +1
Query: 7 DRSGFGSFGM-RSPEGYGSDRSSQSGGRSSFGGGRSGGSSNNRSSGFGD---FGSDRSSQ 174
DRSG GS+G RS GYG DRS G R +GG R G +R GD +G DR
Sbjct: 428 DRSG-GSYGADRSGGGYGGDRSGYGGDRGGYGGDRGGSYGGDRGGYGGDRGGYGGDRGGY 486
Query: 175 SGGRSSFGG 201
G R +GG
Sbjct: 487 GGDRGGYGG 495
Score = 53.5 bits (127), Expect = 7e-06
Identities = 30/71 (42%), Positives = 36/71 (50%)
Frame = +1
Query: 7 DRSGFGSFGMRSPEGYGSDRSSQSGGRSSFGGGRSGGSSNNRSSGFGDFGSDRSSQSGGR 186
DR G+G G R GYG DR G R +GG R G +R G G +G DRS GG
Sbjct: 468 DRGGYG--GDRG--GYGGDRGGYGGDRGGYGGDRRGAYGGDRGGGSGGYGGDRSGGYGGD 523
Query: 187 SSFGGFGSNDG 219
GG+G + G
Sbjct: 524 RG-GGYGGDRG 533
[9][TOP]
>UniRef100_Q92804-2 Isoform Short of TATA-binding protein-associated factor 2N n=1
Tax=Homo sapiens RepID=Q92804-2
Length = 589
Score = 53.9 bits (128), Expect = 5e-06
Identities = 33/72 (45%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 7 DRSGFGSFGMRSPEGYGSDRSSQSGGRSSFGGGRS-GGSSNNRSSGFGDFGSDRSSQSGG 183
DR G+G G R GYG DR G R +GG RS GG +R G G +G DRS GG
Sbjct: 494 DRGGYG--GDRG--GYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSG-YGGDRSGGYGG 548
Query: 184 RSSFGGFGSNDG 219
S GG+G + G
Sbjct: 549 DRSGGGYGGDRG 560
[10][TOP]
>UniRef100_Q92804 TATA-binding protein-associated factor 2N n=2 Tax=Homo sapiens
RepID=RBP56_HUMAN
Length = 592
Score = 53.9 bits (128), Expect = 5e-06
Identities = 33/72 (45%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 7 DRSGFGSFGMRSPEGYGSDRSSQSGGRSSFGGGRS-GGSSNNRSSGFGDFGSDRSSQSGG 183
DR G+G G R GYG DR G R +GG RS GG +R G G +G DRS GG
Sbjct: 497 DRGGYG--GDRG--GYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSG-YGGDRSGGYGG 551
Query: 184 RSSFGGFGSNDG 219
S GG+G + G
Sbjct: 552 DRSGGGYGGDRG 563
[11][TOP]
>UniRef100_Q8BQ46 Putative uncharacterized protein n=2 Tax=Mus musculus
RepID=Q8BQ46_MOUSE
Length = 557
Score = 53.5 bits (127), Expect = 7e-06
Identities = 34/79 (43%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = +1
Query: 7 DRSGFGSFGMRSPEGYGSDRSSQSGG-RSSFGGGRSGGSSNNRSSGFGD---FGSDRSSQ 174
DRSG G G RS GYG DR GG R +GG R G +R GD +G DR
Sbjct: 419 DRSGGGYGGDRSGGGYGGDRGGSYGGDRGGYGGDRGGSYGGDRGGYGGDRGGYGGDRGGY 478
Query: 175 SGGRSSFGG-FGSNDGKRS 228
G R +GG G G RS
Sbjct: 479 GGDRGGYGGDRGGYGGDRS 497
[12][TOP]
>UniRef100_C5YRW1 Putative uncharacterized protein Sb08g021180 n=1 Tax=Sorghum
bicolor RepID=C5YRW1_SORBI
Length = 618
Score = 53.5 bits (127), Expect = 7e-06
Identities = 37/81 (45%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Frame = +1
Query: 7 DRSGFGSFGMRSPEG----YGSDRSSQSGGRSSFGGGRS--GGSSNNRSSGFGDFGSDR- 165
DRSG G FG G G RS SGG G GRS GGS RS GFG+ GS R
Sbjct: 538 DRSGGGGFGRSGGGGGFGDSGFGRSGGSGGFGDSGFGRSSGGGSGFGRSGGFGESGSGRF 597
Query: 166 --SSQSGGRSSFGGFGSNDGK 222
S G SFGGFG + +
Sbjct: 598 GGGFGSSGSGSFGGFGDKNSR 618
[13][TOP]
>UniRef100_UPI00005A1D26 PREDICTED: similar to TAF15 RNA polymerase II, TATA box binding
protein (TBP)-associated factor isoform 6 n=1 Tax=Canis
lupus familiaris RepID=UPI00005A1D26
Length = 515
Score = 53.1 bits (126), Expect = 9e-06
Identities = 28/67 (41%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 22 GSFGMRSPEGYGSDRSSQSGG-RSSFGGGRSGGSSNNRSSGFGDFGSDRSSQSGGRSSFG 198
G +G GYG DR GG R +GG RSGG G G +G DR GG S G
Sbjct: 428 GGYGGDRGGGYGGDRGGGYGGDRGGYGGDRSGGGYGGDRGGGGGYGGDRGGGYGGDRSGG 487
Query: 199 GFGSNDG 219
G+G + G
Sbjct: 488 GYGGDRG 494
[14][TOP]
>UniRef100_UPI00005A1D25 PREDICTED: similar to TAF15 RNA polymerase II, TATA box binding
protein (TBP)-associated factor isoform 5 n=1 Tax=Canis
lupus familiaris RepID=UPI00005A1D25
Length = 501
Score = 53.1 bits (126), Expect = 9e-06
Identities = 28/67 (41%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 22 GSFGMRSPEGYGSDRSSQSGG-RSSFGGGRSGGSSNNRSSGFGDFGSDRSSQSGGRSSFG 198
G +G GYG DR GG R +GG RSGG G G +G DR GG S G
Sbjct: 414 GGYGGDRGGGYGGDRGGGYGGDRGGYGGDRSGGGYGGDRGGGGGYGGDRGGGYGGDRSGG 473
Query: 199 GFGSNDG 219
G+G + G
Sbjct: 474 GYGGDRG 480
[15][TOP]
>UniRef100_UPI00005A1D23 PREDICTED: similar to TAF15 RNA polymerase II, TATA box binding
protein (TBP)-associated factor isoform 3 n=1 Tax=Canis
lupus familiaris RepID=UPI00005A1D23
Length = 507
Score = 53.1 bits (126), Expect = 9e-06
Identities = 28/67 (41%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 22 GSFGMRSPEGYGSDRSSQSGG-RSSFGGGRSGGSSNNRSSGFGDFGSDRSSQSGGRSSFG 198
G +G GYG DR GG R +GG RSGG G G +G DR GG S G
Sbjct: 432 GGYGGDRGGGYGGDRGGGYGGDRGGYGGDRSGGGYGGDRGGGGGYGGDRGGGYGGDRSGG 491
Query: 199 GFGSNDG 219
G+G + G
Sbjct: 492 GYGGDRG 498
[16][TOP]
>UniRef100_UPI00005A1D22 PREDICTED: similar to TBP-associated factor 15 isoform 1 isoform 2
n=1 Tax=Canis lupus familiaris RepID=UPI00005A1D22
Length = 303
Score = 53.1 bits (126), Expect = 9e-06
Identities = 28/67 (41%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 22 GSFGMRSPEGYGSDRSSQSGG-RSSFGGGRSGGSSNNRSSGFGDFGSDRSSQSGGRSSFG 198
G +G GYG DR GG R +GG RSGG G G +G DR GG S G
Sbjct: 216 GGYGGDRGGGYGGDRGGGYGGDRGGYGGDRSGGGYGGDRGGGGGYGGDRGGGYGGDRSGG 275
Query: 199 GFGSNDG 219
G+G + G
Sbjct: 276 GYGGDRG 282
[17][TOP]
>UniRef100_UPI00005A1D21 PREDICTED: similar to TAF15 RNA polymerase II, TATA box binding
protein (TBP)-associated factor isoform 1 n=1 Tax=Canis
lupus familiaris RepID=UPI00005A1D21
Length = 571
Score = 53.1 bits (126), Expect = 9e-06
Identities = 28/67 (41%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 22 GSFGMRSPEGYGSDRSSQSGG-RSSFGGGRSGGSSNNRSSGFGDFGSDRSSQSGGRSSFG 198
G +G GYG DR GG R +GG RSGG G G +G DR GG S G
Sbjct: 484 GGYGGDRGGGYGGDRGGGYGGDRGGYGGDRSGGGYGGDRGGGGGYGGDRGGGYGGDRSGG 543
Query: 199 GFGSNDG 219
G+G + G
Sbjct: 544 GYGGDRG 550
[18][TOP]
>UniRef100_B4E312 cDNA FLJ53422, highly similar to TATA-binding protein-associated
factor 2N n=1 Tax=Homo sapiens RepID=B4E312_HUMAN
Length = 395
Score = 53.1 bits (126), Expect = 9e-06
Identities = 33/72 (45%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 7 DRSGFGSFGMRSPEGYGSDRSSQSGGRSSFGGGRS-GGSSNNRSSGFGDFGSDRSSQSGG 183
DR G+G G R GYG DR G R +GG RS GG +R G G +G DRS GG
Sbjct: 300 DRGGYG--GDRG--GYGGDRGGYGGDRGGYGGVRSRGGYGGDRGGGSG-YGGDRSGGYGG 354
Query: 184 RSSFGGFGSNDG 219
S GG+G + G
Sbjct: 355 DRSGGGYGGDRG 366