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[1][TOP]
>UniRef100_Q0WMY5 Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic n=1 Tax=Arabidopsis thaliana
RepID=PP365_ARATH
Length = 952
Score = 251 bits (641), Expect = 2e-65
Identities = 121/121 (100%), Positives = 121/121 (100%)
Frame = +2
Query: 2 SSFGSSLASKLRLSSKLSPPPPPPPPPPVEETTQFRDEFRSDTKPPEEETRNPQQEFRQE 181
SSFGSSLASKLRLSSKLSPPPPPPPPPPVEETTQFRDEFRSDTKPPEEETRNPQQEFRQE
Sbjct: 105 SSFGSSLASKLRLSSKLSPPPPPPPPPPVEETTQFRDEFRSDTKPPEEETRNPQQEFRQE 164
Query: 182 GKIFVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIYAAEKSAMKAV 361
GKIFVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIYAAEKSAMKAV
Sbjct: 165 GKIFVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIYAAEKSAMKAV 224
Query: 362 E 364
E
Sbjct: 225 E 225
[2][TOP]
>UniRef100_B9HKM1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HKM1_POPTR
Length = 877
Score = 142 bits (357), Expect = 2e-32
Identities = 75/119 (63%), Positives = 89/119 (74%), Gaps = 3/119 (2%)
Frame = +2
Query: 17 SLASKLRLSSKLSPPPPPPPPPPVEETTQFRDEFRSDTKPPEEETRNPQQEFRQEGKIFV 196
SL++KLRLSSKLS PPPPPPP ETT+ + +T+ E E P+ +F Q+GKIF+
Sbjct: 108 SLSTKLRLSSKLSHPPPPPPPL---ETTRTPEAETQETRKVENEA--PKTDFCQKGKIFI 162
Query: 197 GNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIY---AAEKSAMKAVE 364
GNLP WIKK E EFFRQFGPI+NV+LI GH+E E+NAGFGFIIY AEKSAMKA E
Sbjct: 163 GNLPNWIKKHELSEFFRQFGPIKNVVLINGHNETERNAGFGFIIYDGPTAEKSAMKAEE 221
[3][TOP]
>UniRef100_A7QHV8 Chromosome undetermined scaffold_100, whole genome shotgun sequence
n=1 Tax=Vitis vinifera RepID=A7QHV8_VITVI
Length = 929
Score = 138 bits (348), Expect = 2e-31
Identities = 71/120 (59%), Positives = 86/120 (71%), Gaps = 3/120 (2%)
Frame = +2
Query: 14 SSLASKLRLSSKLSPPPPPPPPPPVEETTQFRDEFRSDTKPPEEETRNPQQEFRQEGKIF 193
++L +KL LSS+LSPPPPPPP P +ET + S +P+ EFRQEGKIF
Sbjct: 90 ANLTNKLWLSSQLSPPPPPPPTRPPQETIDDNEVTVSSNLDNLCSDGSPEIEFRQEGKIF 149
Query: 194 VGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIYA---AEKSAMKAVE 364
VGNLP W+KK E EFFRQFGPIENVILIKGH++ ++NAGFGF+IY A SAM+AVE
Sbjct: 150 VGNLPNWVKKNEVSEFFRQFGPIENVILIKGHNDNQRNAGFGFVIYGGPMASGSAMRAVE 209
[4][TOP]
>UniRef100_B9RPX5 Pentatricopeptide repeat-containing protein, putative (Fragment)
n=1 Tax=Ricinus communis RepID=B9RPX5_RICCO
Length = 924
Score = 137 bits (345), Expect = 4e-31
Identities = 77/123 (62%), Positives = 85/123 (69%), Gaps = 7/123 (5%)
Frame = +2
Query: 17 SLASKLRLSSKLSPPPPPP----PPPPVEETTQFRDEFRSDTKPPEEETRNPQQEFRQEG 184
SL+SKLRLS KL P PPPP PPPPV D K E E+ P EFRQEG
Sbjct: 111 SLSSKLRLSGKLFPLPPPPLPLPPPPPVPRAKTQVD------KHQENESHKP--EFRQEG 162
Query: 185 KIFVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIY---AAEKSAMK 355
KIF+GNLP WIKK E EFFRQFGPI+ VILIKG++E E+NAGFGF+IY AEKSA K
Sbjct: 163 KIFIGNLPNWIKKHEISEFFRQFGPIKKVILIKGYNETERNAGFGFVIYDDKTAEKSATK 222
Query: 356 AVE 364
AVE
Sbjct: 223 AVE 225
[5][TOP]
>UniRef100_B9HVL0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HVL0_POPTR
Length = 941
Score = 135 bits (341), Expect = 1e-30
Identities = 73/119 (61%), Positives = 83/119 (69%), Gaps = 3/119 (2%)
Frame = +2
Query: 17 SLASKLRLSSKLSPPPPPPPPPPVEETTQFRDEFRSDTKPPEEETRNPQQEFRQEGKIFV 196
SL++KLRLSSKLSPPPPPP PPP E + K + E P+ EF Q GKIF+
Sbjct: 96 SLSTKLRLSSKLSPPPPPP-PPPPPLEILQTPEAETQEKTQKIENEAPRIEFYQNGKIFI 154
Query: 197 GNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIY---AAEKSAMKAVE 364
GNLP WIKK E EFF QFGPI+NVILI+ H+E E+NAGFGFIIY A KSAMKA E
Sbjct: 155 GNLPNWIKKHELSEFFSQFGPIKNVILIQSHNETERNAGFGFIIYDGPKAGKSAMKAEE 213
[6][TOP]
>UniRef100_Q1G1I8 Pentatricopeptide repeat protein n=1 Tax=Zea mays
RepID=Q1G1I8_MAIZE
Length = 886
Score = 117 bits (294), Expect = 3e-25
Identities = 63/128 (49%), Positives = 79/128 (61%), Gaps = 13/128 (10%)
Frame = +2
Query: 20 LASKLRLSSKLSPPPPPP----------PPPPVEETTQFRDEFRSDTKPPEEETRNPQQE 169
LASKL L+SKLSPPPPPP PPPP T +P +E Q++
Sbjct: 54 LASKLWLTSKLSPPPPPPAPLQTAEEPSPPPPTPPT-----------EPEQEAPPLRQED 102
Query: 170 FRQEGKIFVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIYAA---E 340
FRQ+GK+FVGNLP W +KPE EFFRQFGP+E V L++GH + E+N GF F+ Y E
Sbjct: 103 FRQKGKVFVGNLPLWARKPEIAEFFRQFGPLEKVELVRGHDDPERNVGFCFLYYGGDDPE 162
Query: 341 KSAMKAVE 364
+A +AVE
Sbjct: 163 AAAGRAVE 170
[7][TOP]
>UniRef100_C5YAP4 Putative uncharacterized protein Sb06g033480 n=1 Tax=Sorghum
bicolor RepID=C5YAP4_SORBI
Length = 888
Score = 113 bits (283), Expect = 6e-24
Identities = 60/126 (47%), Positives = 79/126 (62%), Gaps = 11/126 (8%)
Frame = +2
Query: 20 LASKLRLSSKLSPPPPPP--------PPPPVEETTQFRDEFRSDTKPPEEETRNPQQEFR 175
LASKL L+SKLSPPPP P P PP + E + +P +E Q++FR
Sbjct: 52 LASKLWLTSKLSPPPPAPASLAEEPAPQPPTPPS-----EPEPEPEPEQEAEALRQEDFR 106
Query: 176 QEGKIFVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIYAA---EKS 346
Q+GK+FVGNLP W +KP+ EFFRQFGP+E V L++GH + E+N GF F+ Y E +
Sbjct: 107 QKGKVFVGNLPLWARKPDIAEFFRQFGPLEKVELVRGHDDPERNVGFCFLYYGGDDPEAA 166
Query: 347 AMKAVE 364
A +AVE
Sbjct: 167 AARAVE 172
[8][TOP]
>UniRef100_Q259U0 H0913C04.4 protein n=2 Tax=Oryza sativa RepID=Q259U0_ORYSA
Length = 900
Score = 109 bits (273), Expect = 8e-23
Identities = 60/121 (49%), Positives = 75/121 (61%), Gaps = 6/121 (4%)
Frame = +2
Query: 20 LASKLRLSSKLSPPPPPPPPPPVEETTQFRDEFRSDTKPPEEETR---NPQQEFRQEGKI 190
L+SKL LSSKLSPPPP P TT + PPE E Q+EFR +GK+
Sbjct: 67 LSSKLWLSSKLSPPPPETLEQPEPSTTT-----TTTPPPPEPEAEAEARRQEEFRHKGKV 121
Query: 191 FVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIYA---AEKSAMKAV 361
FVGNLP W +K E EFFRQFGP+E V L++GH + E+N GF F+ Y A+ +A +AV
Sbjct: 122 FVGNLPLWARKAEIAEFFRQFGPLEKVELVRGHDDPERNVGFCFLYYGGDDADAAAERAV 181
Query: 362 E 364
E
Sbjct: 182 E 182
[9][TOP]
>UniRef100_Q7XPU8 OSJNBa0088H09.8 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q7XPU8_ORYSJ
Length = 905
Score = 109 bits (272), Expect = 1e-22
Identities = 60/121 (49%), Positives = 75/121 (61%), Gaps = 6/121 (4%)
Frame = +2
Query: 20 LASKLRLSSKLSPPPPPPPPPPVEETTQFRDEFRSDTKPPEEETR---NPQQEFRQEGKI 190
L+SKL LSSKLSPPPP P TT + PPE E Q+EFR +GK+
Sbjct: 67 LSSKLWLSSKLSPPPPETLEQPEPSTTTTT----TTPPPPEPEAEAEARRQEEFRHKGKV 122
Query: 191 FVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIYA---AEKSAMKAV 361
FVGNLP W +K E EFFRQFGP+E V L++GH + E+N GF F+ Y A+ +A +AV
Sbjct: 123 FVGNLPLWARKAEIAEFFRQFGPLEKVELVRGHDDPERNVGFCFLYYGGDDADAAAERAV 182
Query: 362 E 364
E
Sbjct: 183 E 183
[10][TOP]
>UniRef100_Q0J8W3 Os04g0684500 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q0J8W3_ORYSJ
Length = 901
Score = 109 bits (272), Expect = 1e-22
Identities = 60/121 (49%), Positives = 75/121 (61%), Gaps = 6/121 (4%)
Frame = +2
Query: 20 LASKLRLSSKLSPPPPPPPPPPVEETTQFRDEFRSDTKPPEEETR---NPQQEFRQEGKI 190
L+SKL LSSKLSPPPP P TT + PPE E Q+EFR +GK+
Sbjct: 67 LSSKLWLSSKLSPPPPETLEQPEPSTTTTT----TTPPPPEPEAEAEARRQEEFRHKGKV 122
Query: 191 FVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIYA---AEKSAMKAV 361
FVGNLP W +K E EFFRQFGP+E V L++GH + E+N GF F+ Y A+ +A +AV
Sbjct: 123 FVGNLPLWARKAEIAEFFRQFGPLEKVELVRGHDDPERNVGFCFLYYGGDDADAAAERAV 182
Query: 362 E 364
E
Sbjct: 183 E 183
[11][TOP]
>UniRef100_A3AYT1 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=A3AYT1_ORYSJ
Length = 879
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/83 (53%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +2
Query: 20 LASKLRLSSKLSPPPPPPPPPPVEETTQFRDEFRSDTKPPEEETR---NPQQEFRQEGKI 190
L+SKL LSSKLSPPPP P TT + PPE E Q+EFR +GK+
Sbjct: 67 LSSKLWLSSKLSPPPPETLEQPEPSTTTTT----TTPPPPEPEAEAEARRQEEFRHKGKV 122
Query: 191 FVGNLPTWIKKPEFEEFFRQFGP 259
FVGNLP W +K E EFFRQFGP
Sbjct: 123 FVGNLPLWARKAEIAEFFRQFGP 145
[12][TOP]
>UniRef100_A9SZZ6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SZZ6_PHYPA
Length = 831
Score = 59.7 bits (143), Expect = 1e-07
Identities = 23/50 (46%), Positives = 36/50 (72%)
Frame = +2
Query: 182 GKIFVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIY 331
GK+F+GNLP +K+ + +EFF Q GP+ ++I I+ H + EKN GF F+ +
Sbjct: 48 GKVFIGNLPYHVKRADVKEFFSQCGPVRDIIFIRSHTDPEKNKGFCFLFF 97
[13][TOP]
>UniRef100_UPI00006A54B7 PREDICTED: similar to paraspeckle component 1 n=1 Tax=Ciona
intestinalis RepID=UPI00006A54B7
Length = 531
Score = 56.2 bits (134), Expect = 1e-06
Identities = 30/99 (30%), Positives = 44/99 (44%)
Frame = +2
Query: 62 PPPPPPPPVEETTQFRDEFRSDTKPPEEETRNPQQEFRQEGKIFVGNLPTWIKKPEFEEF 241
P P PPP + T S+ R +++F Q ++F+GNLPT I + EF+
Sbjct: 81 PEPVPPPSLANETGHSSRNESNDSHQNASNRPTERKFTQRSRLFIGNLPTSITEEEFKNL 140
Query: 242 FRQFGPIENVILIKGHHEVEKNAGFGFIIYAAEKSAMKA 358
FR FG + V GFGF+ +A +A
Sbjct: 141 FRPFGEVSETF-------VNAEKGFGFVRMDTRTNAERA 172
[14][TOP]
>UniRef100_C5XR18 Putative uncharacterized protein Sb03g027920 n=1 Tax=Sorghum
bicolor RepID=C5XR18_SORBI
Length = 349
Score = 55.1 bits (131), Expect = 2e-06
Identities = 27/63 (42%), Positives = 44/63 (69%)
Frame = +2
Query: 158 PQQEFRQEGKIFVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIYAA 337
P ++F+ + KIFVG LP+ +K+ EF+EFF +FG + +I+ H ++ GFGFI++ A
Sbjct: 95 PLKDFKTK-KIFVGGLPSALKEDEFKEFFSKFGKVVEHEIIR-DHTTNRSRGFGFIVFDA 152
Query: 338 EKS 346
EK+
Sbjct: 153 EKT 155
[15][TOP]
>UniRef100_B9F0V6 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9F0V6_ORYSJ
Length = 459
Score = 55.1 bits (131), Expect = 2e-06
Identities = 26/63 (41%), Positives = 44/63 (69%)
Frame = +2
Query: 158 PQQEFRQEGKIFVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIYAA 337
P ++F+ + KIFVG LP+ +K+ EF+EFF +FG + +I+ H ++ GFGF+++ A
Sbjct: 96 PLKDFKTK-KIFVGGLPSALKEDEFKEFFSKFGKVVEHEIIR-DHSTNRSRGFGFVVFDA 153
Query: 338 EKS 346
EK+
Sbjct: 154 EKT 156
[16][TOP]
>UniRef100_Q6Z0P6 Os08g0320100 protein n=2 Tax=Oryza sativa RepID=Q6Z0P6_ORYSJ
Length = 350
Score = 55.1 bits (131), Expect = 2e-06
Identities = 26/63 (41%), Positives = 44/63 (69%)
Frame = +2
Query: 158 PQQEFRQEGKIFVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIYAA 337
P ++F+ + KIFVG LP+ +K+ EF+EFF +FG + +I+ H ++ GFGF+++ A
Sbjct: 96 PLKDFKTK-KIFVGGLPSALKEDEFKEFFSKFGKVVEHEIIR-DHSTNRSRGFGFVVFDA 153
Query: 338 EKS 346
EK+
Sbjct: 154 EKT 156
[17][TOP]
>UniRef100_UPI0000E2351B PREDICTED: paraspeckle protein 1 isoform 2 n=1 Tax=Pan troglodytes
RepID=UPI0000E2351B
Length = 530
Score = 53.9 bits (128), Expect = 5e-06
Identities = 32/104 (30%), Positives = 52/104 (50%)
Frame = +2
Query: 14 SSLASKLRLSSKLSPPPPPPPPPPVEETTQFRDEFRSDTKPPEEETRNPQQEFRQEGKIF 193
++ A L L+ + +PP P PP +E F + +S KP E+ + Q ++F
Sbjct: 33 AAAAMALALAGEPAPPAPAPPEDHPDEEMGFTIDIKSFLKPGEKT-------YTQRCRLF 85
Query: 194 VGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFI 325
VGNLPT I + +F+ F ++G V + ++ GFGFI
Sbjct: 86 VGNLPTDITEEDFKRLFERYGEPSEVF-------INRDRGFGFI 122
[18][TOP]
>UniRef100_A9SC54 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9SC54_PHYPA
Length = 727
Score = 53.9 bits (128), Expect = 5e-06
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Frame = +2
Query: 182 GKIFVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVE-KNAGFGFIIYAA---EKSA 349
GKIFVGNLP ++KK +EFF + GP++++ L++ + + + K G+ F+ + +A
Sbjct: 1 GKIFVGNLPHYVKKEAVQEFFSKCGPVQDIFLVRNNSDPQKKKRGYCFLFFGGPDPHSAA 60
Query: 350 MKAVE 364
M+AVE
Sbjct: 61 MRAVE 65
[19][TOP]
>UniRef100_Q8WXF1-2 Isoform 2 of Paraspeckle component 1 n=1 Tax=Homo sapiens
RepID=Q8WXF1-2
Length = 393
Score = 53.9 bits (128), Expect = 5e-06
Identities = 32/104 (30%), Positives = 52/104 (50%)
Frame = +2
Query: 14 SSLASKLRLSSKLSPPPPPPPPPPVEETTQFRDEFRSDTKPPEEETRNPQQEFRQEGKIF 193
++ A L L+ + +PP P PP +E F + +S KP E+ + Q ++F
Sbjct: 33 AAAAMALALAGEPAPPAPAPPEDHPDEEMGFTIDIKSFLKPGEKT-------YTQRCRLF 85
Query: 194 VGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFI 325
VGNLPT I + +F+ F ++G V + ++ GFGFI
Sbjct: 86 VGNLPTDITEEDFKRLFERYGEPSEVF-------INRDRGFGFI 122
[20][TOP]
>UniRef100_Q8WXF1 Paraspeckle component 1 n=1 Tax=Homo sapiens RepID=PSPC1_HUMAN
Length = 523
Score = 53.9 bits (128), Expect = 5e-06
Identities = 32/104 (30%), Positives = 52/104 (50%)
Frame = +2
Query: 14 SSLASKLRLSSKLSPPPPPPPPPPVEETTQFRDEFRSDTKPPEEETRNPQQEFRQEGKIF 193
++ A L L+ + +PP P PP +E F + +S KP E+ + Q ++F
Sbjct: 33 AAAAMALALAGEPAPPAPAPPEDHPDEEMGFTIDIKSFLKPGEKT-------YTQRCRLF 85
Query: 194 VGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFI 325
VGNLPT I + +F+ F ++G V + ++ GFGFI
Sbjct: 86 VGNLPTDITEEDFKRLFERYGEPSEVF-------INRDRGFGFI 122
[21][TOP]
>UniRef100_UPI0000F2CF7B PREDICTED: similar to paraspeckle protein 1 alpha n=1
Tax=Monodelphis domestica RepID=UPI0000F2CF7B
Length = 522
Score = 53.1 bits (126), Expect = 9e-06
Identities = 33/108 (30%), Positives = 52/108 (48%)
Frame = +2
Query: 2 SSFGSSLASKLRLSSKLSPPPPPPPPPPVEETTQFRDEFRSDTKPPEEETRNPQQEFRQE 181
S ++ A L L+ + +PPP P EE F + +S KP E+ + Q
Sbjct: 28 SETAAAAAMALALAGEQAPPPSAPQEDHQEEEMGFTIDIKSFLKPGEKT-------YTQR 80
Query: 182 GKIFVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFI 325
++FVGNLPT I + +F+ F ++G V + ++ GFGFI
Sbjct: 81 CRLFVGNLPTDITEEDFKRLFERYGEPSEVF-------INRDRGFGFI 121
[22][TOP]
>UniRef100_UPI000052291F PREDICTED: similar to Ras GTPase-activating protein-binding protein
2 (G3BP-2) (GAP SH3 domain-binding protein 2) n=1
Tax=Ciona intestinalis RepID=UPI000052291F
Length = 460
Score = 53.1 bits (126), Expect = 9e-06
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Frame = +2
Query: 26 SKLRLSSKLSPPPPPPPPPPVEETTQFRDEFRSD---TKPPEEE--------TRNPQQ-- 166
S + + + PP P P P E + + R + T P EEE R P+
Sbjct: 266 SNTQQGTVVKAPPKPEPVEPAESAPKPPRQPRQNQRFTAPKEEERAYGDRNDARRPRDAP 325
Query: 167 ----EFRQEGKIFVGNLPTWIKKPEFEEFFRQFGPIENVILIKGHHEVEKNAGFGFIIYA 334
+ +IFVGNLP IK+ + + F +FG NV+ ++ +H N FGF+I+
Sbjct: 326 SGVVRYPDNQQIFVGNLPIDIKEADLKNHFAEFG---NVLEVRINHSHSNNPSFGFVIFE 382
Query: 335 AEKSAMKAVE 364
+ + K +E
Sbjct: 383 SPSAVEKVLE 392