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[1][TOP]
>UniRef100_UPI00001970C0 CPSF160; nucleic acid binding n=1 Tax=Arabidopsis thaliana
RepID=UPI00001970C0
Length = 1442
Score = 227 bits (578), Expect = 4e-58
Identities = 110/110 (100%), Positives = 110/110 (100%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV
Sbjct: 511 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 570
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET
Sbjct: 571 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 620
[2][TOP]
>UniRef100_Q8H1T4 Putative cleavage and polyadenylation specificity factor 160 kDa
subunit n=1 Tax=Arabidopsis thaliana RepID=Q8H1T4_ARATH
Length = 1442
Score = 227 bits (578), Expect = 4e-58
Identities = 110/110 (100%), Positives = 110/110 (100%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV
Sbjct: 511 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 570
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET
Sbjct: 571 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 620
[3][TOP]
>UniRef100_Q9FGR0 Probable cleavage and polyadenylation specificity factor subunit 1
n=1 Tax=Arabidopsis thaliana RepID=CPSF1_ARATH
Length = 1448
Score = 227 bits (578), Expect = 4e-58
Identities = 110/110 (100%), Positives = 110/110 (100%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV
Sbjct: 517 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 576
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET
Sbjct: 577 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 626
[4][TOP]
>UniRef100_UPI0001984F5D PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984F5D
Length = 1442
Score = 206 bits (524), Expect = 7e-52
Identities = 94/109 (86%), Positives = 105/109 (96%)
Frame = +3
Query: 6 VNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVE 185
+NVGP+KDFAYGLRINAD ATG++KQSNYELVCCSGHGKNGALC+L+QSIRPEMITEVE
Sbjct: 505 INVGPLKDFAYGLRINADPKATGIAKQSNYELVCCSGHGKNGALCILQQSIRPEMITEVE 564
Query: 186 LPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
LPGCKGIWTVYHK++RGHNADS+KMA +DEYHAYLIISLE+RTMVLET
Sbjct: 565 LPGCKGIWTVYHKNTRGHNADSTKMATKDDEYHAYLIISLESRTMVLET 613
[5][TOP]
>UniRef100_A7QGU1 Chromosome chr16 scaffold_94, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QGU1_VITVI
Length = 1448
Score = 206 bits (524), Expect = 7e-52
Identities = 94/109 (86%), Positives = 105/109 (96%)
Frame = +3
Query: 6 VNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVE 185
+NVGP+KDFAYGLRINAD ATG++KQSNYELVCCSGHGKNGALC+L+QSIRPEMITEVE
Sbjct: 511 INVGPLKDFAYGLRINADPKATGIAKQSNYELVCCSGHGKNGALCILQQSIRPEMITEVE 570
Query: 186 LPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
LPGCKGIWTVYHK++RGHNADS+KMA +DEYHAYLIISLE+RTMVLET
Sbjct: 571 LPGCKGIWTVYHKNTRGHNADSTKMATKDDEYHAYLIISLESRTMVLET 619
[6][TOP]
>UniRef100_B9I227 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9I227_POPTR
Length = 1455
Score = 203 bits (516), Expect = 6e-51
Identities = 97/110 (88%), Positives = 106/110 (96%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+NVGP+KDFAYGLRINADANATG+SKQSNYELVCCSGHGKNGALCVL+QSIRPEMITEV
Sbjct: 514 LINVGPLKDFAYGLRINADANATGISKQSNYELVCCSGHGKNGALCVLQQSIRPEMITEV 573
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGCKGIWTVYHK++R H+ DS KMA+D DEYHAYLIIS+EARTMVLET
Sbjct: 574 ELPGCKGIWTVYHKNARIHSVDSLKMASD-DEYHAYLIISMEARTMVLET 622
[7][TOP]
>UniRef100_B9R9N0 Cleavage and polyadenylation specificity factor cpsf, putative n=1
Tax=Ricinus communis RepID=B9R9N0_RICCO
Length = 1461
Score = 198 bits (504), Expect = 1e-49
Identities = 90/110 (81%), Positives = 103/110 (93%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+NVGP+KDF+YGLR N DA+ATG++KQSNY+LVCCSGHGKNG LC+LRQSIRPEMITEV
Sbjct: 510 LINVGPLKDFSYGLRSNYDASATGIAKQSNYDLVCCSGHGKNGTLCILRQSIRPEMITEV 569
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
+LPGC+GIWTVYHK++RGHN D SKMAA DEYHAYLIIS+EARTMVLET
Sbjct: 570 DLPGCRGIWTVYHKNARGHNVDLSKMAAAADEYHAYLIISMEARTMVLET 619
[8][TOP]
>UniRef100_A7PZW2 Chromosome chr15 scaffold_40, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PZW2_VITVI
Length = 414
Score = 182 bits (462), Expect = 1e-44
Identities = 87/110 (79%), Positives = 98/110 (89%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+NVGP+KDF YGLRINAD ATG+ KQSNYEL+CCSGHGKNGALC+L+QSIRPE ITEV
Sbjct: 88 LINVGPLKDF-YGLRINADLKATGIVKQSNYELMCCSGHGKNGALCILQQSIRPEGITEV 146
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGCK IWTVYHK++RGH ADS+KM +DEY AYLIIS E+RTMVLET
Sbjct: 147 ELPGCKRIWTVYHKNTRGHKADSTKMVTKDDEYCAYLIISPESRTMVLET 196
[9][TOP]
>UniRef100_A5AHM9 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5AHM9_VITVI
Length = 609
Score = 182 bits (461), Expect = 1e-44
Identities = 85/110 (77%), Positives = 98/110 (89%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+NVGP+K FAY LRINAD ATG+ KQSN+EL+CCSGHGKNGALC+L+QSIRPEMITEV
Sbjct: 436 LINVGPLKVFAYALRINADLKATGIVKQSNFELMCCSGHGKNGALCILQQSIRPEMITEV 495
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
EL GC+ IWTVYHK++RGHNADS+KM +DEY AYLIIS E+RTMVLET
Sbjct: 496 ELSGCERIWTVYHKNTRGHNADSTKMVTKDDEYCAYLIISPESRTMVLET 545
[10][TOP]
>UniRef100_A5C7U9 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5C7U9_VITVI
Length = 1989
Score = 166 bits (420), Expect = 8e-40
Identities = 77/102 (75%), Positives = 89/102 (87%), Gaps = 1/102 (0%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+NVGP+KDFAYGLRIN D ATG+ KQSNYEL+CCSGHGKNGALC+L+QSIRPE ITEV
Sbjct: 1761 LINVGPLKDFAYGLRINTDLKATGIVKQSNYELMCCSGHGKNGALCILQQSIRPERITEV 1820
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADED-EYHAYLIISL 305
ELPGCKGIWTVYHK++RGHNADS KM+ D E+ A++ SL
Sbjct: 1821 ELPGCKGIWTVYHKNTRGHNADSIKMSHVFDLEFRAFIFFSL 1862
[11][TOP]
>UniRef100_B9FE37 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9FE37_ORYSJ
Length = 1441
Score = 165 bits (418), Expect = 1e-39
Identities = 80/110 (72%), Positives = 93/110 (84%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+NVGP+KDF+YGLR NAD NA G +KQSNYELVCCSGHGKNG+L VL+QSIRP++ITEV
Sbjct: 514 LINVGPLKDFSYGLRANADPNAMGNAKQSNYELVCCSGHGKNGSLSVLQQSIRPDLITEV 573
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
ELP C+GIWTVY+KS RG A+++EYHAYLIISLE RTMVLET
Sbjct: 574 ELPSCRGIWTVYYKSYRG-------QMAEDNEYHAYLIISLENRTMVLET 616
[12][TOP]
>UniRef100_B8ARM5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8ARM5_ORYSI
Length = 1503
Score = 165 bits (418), Expect = 1e-39
Identities = 80/110 (72%), Positives = 93/110 (84%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+NVGP+KDF+YGLR NAD NA G +KQSNYELVCCSGHGKNG+L VL+QSIRP++ITEV
Sbjct: 514 LINVGPLKDFSYGLRANADPNAMGNAKQSNYELVCCSGHGKNGSLSVLQQSIRPDLITEV 573
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
ELP C+GIWTVY+KS RG A+++EYHAYLIISLE RTMVLET
Sbjct: 574 ELPSCRGIWTVYYKSYRG-------QMAEDNEYHAYLIISLENRTMVLET 616
[13][TOP]
>UniRef100_Q7XWP1 Probable cleavage and polyadenylation specificity factor subunit 1
n=1 Tax=Oryza sativa Japonica Group RepID=CPSF1_ORYSJ
Length = 1441
Score = 165 bits (418), Expect = 1e-39
Identities = 80/110 (72%), Positives = 93/110 (84%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+NVGP+KDF+YGLR NAD NA G +KQSNYELVCCSGHGKNG+L VL+QSIRP++ITEV
Sbjct: 514 LINVGPLKDFSYGLRANADPNAMGNAKQSNYELVCCSGHGKNGSLSVLQQSIRPDLITEV 573
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
ELP C+GIWTVY+KS RG A+++EYHAYLIISLE RTMVLET
Sbjct: 574 ELPSCRGIWTVYYKSYRG-------QMAEDNEYHAYLIISLENRTMVLET 616
[14][TOP]
>UniRef100_A5BA87 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5BA87_VITVI
Length = 262
Score = 163 bits (413), Expect = 5e-39
Identities = 73/88 (82%), Positives = 82/88 (93%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+NVGP+KDFAYGLRINAD ATG+ KQSNYEL+CCSGHGKNGALC+L+QSIRPE ITEV
Sbjct: 111 LINVGPLKDFAYGLRINADLKATGIVKQSNYELMCCSGHGKNGALCILQQSIRPERITEV 170
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAA 266
ELPGCKGIWTVYHK++RGHNADS KM +
Sbjct: 171 ELPGCKGIWTVYHKNTRGHNADSIKMVS 198
[15][TOP]
>UniRef100_A7QL95 Chromosome chr3 scaffold_117, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QL95_VITVI
Length = 661
Score = 161 bits (408), Expect = 2e-38
Identities = 72/86 (83%), Positives = 80/86 (93%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+NVGP+KDFAYGLRIN D ATG+ KQSNYEL+CCSGHGKNGALC+L+QSIRPE ITEV
Sbjct: 572 LINVGPLKDFAYGLRINTDLKATGIVKQSNYELMCCSGHGKNGALCILQQSIRPERITEV 631
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKM 260
ELPGCKGIWTVYHK++RGHNADS KM
Sbjct: 632 ELPGCKGIWTVYHKNTRGHNADSIKM 657
[16][TOP]
>UniRef100_A9SAP7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SAP7_PHYPA
Length = 1452
Score = 159 bits (401), Expect = 1e-37
Identities = 74/110 (67%), Positives = 91/110 (82%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
LVN+ P++DFAYGLR NAD +ATG+ KQSNYELV CSGHGKNG+L VL QSIRP++I +V
Sbjct: 523 LVNICPLRDFAYGLRSNADQSATGLGKQSNYELVACSGHGKNGSLSVLHQSIRPDLINKV 582
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
LPGC GIWTVYHK+ R + + +++DE+HAYLIISLE+RTMVLET
Sbjct: 583 ALPGCSGIWTVYHKTDRDDSNEFDFGTSEDDEFHAYLIISLESRTMVLET 632
[17][TOP]
>UniRef100_A5BYZ6 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5BYZ6_VITVI
Length = 558
Score = 122 bits (305), Expect = 2e-26
Identities = 64/110 (58%), Positives = 75/110 (68%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L++VGP+KDFAYGLRINAD ATG+ KQ +MITEV
Sbjct: 411 LIDVGPLKDFAYGLRINADLKATGIVKQ--------------------------KMITEV 444
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGC+ IWTVYHK++RGHNADS+KM +DEY AYLIIS E+RTMVLET
Sbjct: 445 ELPGCERIWTVYHKNTRGHNADSTKMITKDDEYCAYLIISPESRTMVLET 494
[18][TOP]
>UniRef100_C1E574 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E574_9CHLO
Length = 1423
Score = 93.6 bits (231), Expect = 6e-18
Identities = 52/116 (44%), Positives = 75/116 (64%), Gaps = 6/116 (5%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++ + P+ D G A A+ G +++ ELV GHGKNGAL +L++ I+PE++TEV
Sbjct: 492 VLGISPIIDLTAG----ASASVQGDTEE-RAELVAACGHGKNGALAILQRGIQPELVTEV 546
Query: 183 E---LPGCKGIWTVYHKS---SRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
E LPG G WTVYH+S R + ++ AA+ D +H+YL+ISLE+ TMVLET
Sbjct: 547 EAGTLPGLMGTWTVYHESRDNERLRESGAAAAAANVDPFHSYLVISLESTTMVLET 602
[19][TOP]
>UniRef100_C1N2Y5 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N2Y5_9CHLO
Length = 1469
Score = 92.0 bits (227), Expect = 2e-17
Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 6/116 (5%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++ + PV D L + A A+ +G + + EL+ GHGKNGAL VL++ I+PE++TEV
Sbjct: 523 VLGISPVID----LTVGASASVSGDTIERT-ELIAACGHGKNGALAVLQRGIQPELVTEV 577
Query: 183 E---LPGCKGIWTVYHKSSRGHNADSSKMAADE---DEYHAYLIISLEARTMVLET 332
E LPG KG WTV+H S+ S AA D YHAYL+ISL + TM+LET
Sbjct: 578 ESGTLPGLKGTWTVHHDSADNERLRGSAAAAAAQAVDPYHAYLVISLASSTMILET 633
[20][TOP]
>UniRef100_UPI000186F109 Cleavage and polyadenylation specificity factor 160 kDa subunit,
putative n=1 Tax=Pediculus humanus corporis
RepID=UPI000186F109
Length = 1409
Score = 86.7 bits (213), Expect = 8e-16
Identities = 45/110 (40%), Positives = 69/110 (62%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+N+GP + + G + ++ + ELV SGHGKNGA+CVL+++IRP+++T
Sbjct: 476 LLNIGPCGNVSMGEPAFLSEEFSN-NRDPDLELVTTSGHGKNGAICVLQRTIRPQVVTTF 534
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGC +WTV G +DS A++D HA+LI+S + TM+L+T
Sbjct: 535 ELPGCLDMWTVI-----GPQSDSGPTQAEDDISHAFLILSQKDSTMILQT 579
[21][TOP]
>UniRef100_Q7QHS8 AGAP011340-PA n=1 Tax=Anopheles gambiae RepID=Q7QHS8_ANOGA
Length = 1434
Score = 83.2 bits (204), Expect = 8e-15
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 6/116 (5%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATG------VSKQSNYELVCCSGHGKNGALCVLRQSIRP 164
++N+GP+ A G R+ A+ +A V + + E+V SGHGKNGALCVL+ SI+P
Sbjct: 459 VLNIGPIAHMAVGERV-AEEDAENQPDVQIVQNKLDIEVVTSSGHGKNGALCVLQSSIKP 517
Query: 165 EMITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
++IT L GC +WTV+ ++ ++ A D HA++I+S E TMVL+T
Sbjct: 518 QVITSFGLSGCVDVWTVFDEA-------VARRAEDGPSTHAFMILSQEGGTMVLQT 566
[22][TOP]
>UniRef100_A7SP44 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SP44_NEMVE
Length = 1420
Score = 82.8 bits (203), Expect = 1e-14
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 8/118 (6%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQS-NYELVCCSGHGKNGALCVLRQSIRPEMITE 179
L+N+GP G ++ Q + E+V CSG+GKNGAL VL++SIRP+++T
Sbjct: 463 LLNIGPCSCMDIGEPAFLSVSSYFADAQELDLEVVSCSGYGKNGALTVLQRSIRPQVVTT 522
Query: 180 VELPGCKGIWTVYHKSSRG-------HNADSSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGC +WTV+ K + H S ++YH++LI+S E +M+L+T
Sbjct: 523 FELPGCTDMWTVFSKDQKKGAQTNAIHRYPSQPCTQGNEKYHSFLILSREDSSMILKT 580
[23][TOP]
>UniRef100_UPI00005EC0E9 PREDICTED: similar to cleavage and polyadenylation specificity
factor, 160 kDa subunit n=1 Tax=Monodelphis domestica
RepID=UPI00005EC0E9
Length = 1450
Score = 81.6 bits (200), Expect = 2e-14
Identities = 46/120 (38%), Positives = 71/120 (59%), Gaps = 10/120 (8%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + A G S + + E+V CSG+GKNGAL VL++SIRP+++T
Sbjct: 477 ILNIGPCANAAMGEPAFLSEEFQN-SPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTF 535
Query: 183 ELPGCKGIWTVY-------HKSSRGHNAD---SSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGC +WTV ++++G A+ SS D+ + H +LI+S E TM+L+T
Sbjct: 536 ELPGCYDMWTVIAPLRKEEDETTKGEGAEQEPSSPETEDDGKRHGFLILSREDSTMILQT 595
[24][TOP]
>UniRef100_UPI00004BBEEB Cleavage and polyadenylation specificity factor subunit 1 (Cleavage
and polyadenylation specificity factor 160 kDa subunit)
(CPSF 160 kDa subunit). n=2 Tax=Canis lupus familiaris
RepID=UPI00004BBEEB
Length = 1398
Score = 81.6 bits (200), Expect = 2e-14
Identities = 47/120 (39%), Positives = 71/120 (59%), Gaps = 10/120 (8%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + A G S + + E+V CSG+GKNGAL VL++SIRP+++T
Sbjct: 425 ILNIGPCANAAMGEPAFLSEEFQN-SPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTF 483
Query: 183 ELPGCKGIWTV-------YHKSSRGHNAD---SSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGC +WTV ++S+G A+ S+ A D+ H +LI+S E TM+L+T
Sbjct: 484 ELPGCYDMWTVIAPVRKEQEETSKGEVAEQESSALEAEDDGRRHGFLILSREDSTMILQT 543
[25][TOP]
>UniRef100_UPI00017968F7 PREDICTED: similar to cleavage and polyadenylation specificity
factor, 160 kDa subunit isoform 1 n=1 Tax=Equus caballus
RepID=UPI00017968F7
Length = 1445
Score = 79.3 bits (194), Expect = 1e-13
Identities = 45/120 (37%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + A G S + + E+V CSG+GKNGAL VL++SIRP+++T
Sbjct: 472 ILNIGPCANAAMGEPAFLSEEFQN-SPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTF 530
Query: 183 ELPGCKGIWTV-------YHKSSRGHNAD---SSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGC +WTV ++ +G + S+ A D+ H +LI+S E TM+L+T
Sbjct: 531 ELPGCYDMWTVIAPVRKEQEETPKGEGTEQEPSAPEADDDGRRHGFLILSREDSTMILQT 590
[26][TOP]
>UniRef100_UPI000155599E PREDICTED: similar to cleavage and polyadenylation specificity
factor 1, partial n=1 Tax=Ornithorhynchus anatinus
RepID=UPI000155599E
Length = 831
Score = 79.3 bits (194), Expect = 1e-13
Identities = 46/120 (38%), Positives = 68/120 (56%), Gaps = 10/120 (8%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + A G S + + E+V CSG+GKNGAL VL++SIRP+++T
Sbjct: 293 ILNIGPCANAAMGEPAFLSEEFQN-SPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTF 351
Query: 183 ELPGCKGIWTVY-------HKSSRGHNADSSKM---AADEDEYHAYLIISLEARTMVLET 332
ELPGC +WTV S +G A+S D+ + H +LI+S E TM+L+T
Sbjct: 352 ELPGCYDMWTVIAPVRKEEGDSPKGEGAESEPTPPEPEDDGKRHGFLILSREDSTMILQT 411
[27][TOP]
>UniRef100_UPI0000DB6D17 PREDICTED: similar to cleavage and polyadenylation specific factor
1 n=1 Tax=Apis mellifera RepID=UPI0000DB6D17
Length = 1415
Score = 79.3 bits (194), Expect = 1e-13
Identities = 43/110 (39%), Positives = 67/110 (60%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+N+GP + + G + ++ + ELV SG+GKNGALCVL+ SIRP+++T
Sbjct: 475 LLNIGPCGNISMGEPAFLSEEFSH-NQDPDVELVTTSGYGKNGALCVLQHSIRPQVVTTF 533
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGC+ +WTV G + ++ + + HA+LI+S E TM+L+T
Sbjct: 534 ELPGCEDMWTVI-----GTLNNDEQIRPEAEGSHAFLILSQEDSTMILQT 578
[28][TOP]
>UniRef100_Q10570 Cleavage and polyadenylation specificity factor subunit 1 n=1
Tax=Homo sapiens RepID=CPSF1_HUMAN
Length = 1443
Score = 79.3 bits (194), Expect = 1e-13
Identities = 45/121 (37%), Positives = 68/121 (56%), Gaps = 11/121 (9%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + A G S + + E+V CSGHGKNGAL VL++SIRP+++T
Sbjct: 469 ILNIGPCANAAVGEPAFLSEEFQN-SPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTF 527
Query: 183 ELPGCKGIWTVY-------HKSSRGHNAD----SSKMAADEDEYHAYLIISLEARTMVLE 329
ELPGC +WTV + +G + ++ A D+ H +LI+S E TM+L+
Sbjct: 528 ELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDSTMILQ 587
Query: 330 T 332
T
Sbjct: 588 T 588
[29][TOP]
>UniRef100_UPI0001B1A4B9 cleavage and polyadenylation specific factor 1 isoform 1 n=1
Tax=Mus musculus RepID=UPI0001B1A4B9
Length = 1450
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 10/120 (8%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + A G S + + E+V CSG+GKNGAL VL++SIRP+++T
Sbjct: 468 MLNIGPCANAAVGEPAFLSEEFQN-SPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTF 526
Query: 183 ELPGCKGIWTVY----------HKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGC +WTV K+ S+ A ++ H +LI+S E TM+L+T
Sbjct: 527 ELPGCYDMWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQT 586
[30][TOP]
>UniRef100_UPI000157EBAB cleavage and polyadenylation specific factor 1 n=1 Tax=Rattus
norvegicus RepID=UPI000157EBAB
Length = 1386
Score = 78.2 bits (191), Expect = 3e-13
Identities = 45/121 (37%), Positives = 69/121 (57%), Gaps = 11/121 (9%)
Frame = +3
Query: 3 LVNVGPVKDFAYGL-RINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITE 179
++N+GP + A G ++ N S + + E+V CSG+GKNGAL VL++SIRP+++T
Sbjct: 466 MLNIGPCANAAVGEPAFLSEEN----SPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTT 521
Query: 180 VELPGCKGIWTVY----------HKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLE 329
ELPGC +WTV K+ S+ A ++ H +LI+S E TM+L+
Sbjct: 522 FELPGCYDMWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQ 581
Query: 330 T 332
T
Sbjct: 582 T 582
[31][TOP]
>UniRef100_Q3U1X8 Putative uncharacterized protein (Fragment) n=1 Tax=Mus musculus
RepID=Q3U1X8_MOUSE
Length = 741
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 10/120 (8%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + A G S + + E+V CSG+GKNGAL VL++SIRP+++T
Sbjct: 468 MLNIGPCANAAVGEPAFLSEEFQN-SPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTF 526
Query: 183 ELPGCKGIWTVY----------HKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGC +WTV K+ S+ A ++ H +LI+S E TM+L+T
Sbjct: 527 ELPGCYDMWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQT 586
[32][TOP]
>UniRef100_B5DEL2 Cpsf1 protein n=1 Tax=Rattus norvegicus RepID=B5DEL2_RAT
Length = 1439
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 10/120 (8%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + A G S + + E+V CSG+GKNGAL VL++SIRP+++T
Sbjct: 466 MLNIGPCANAAVGEPAFLSEEFQN-SPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTF 524
Query: 183 ELPGCKGIWTVY----------HKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGC +WTV K+ S+ A ++ H +LI+S E TM+L+T
Sbjct: 525 ELPGCYDMWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQT 584
[33][TOP]
>UniRef100_Q9EPU4 Cleavage and polyadenylation specificity factor subunit 1 n=1
Tax=Mus musculus RepID=CPSF1_MOUSE
Length = 1441
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 10/120 (8%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + A G S + + E+V CSG+GKNGAL VL++SIRP+++T
Sbjct: 468 MLNIGPCANAAVGEPAFLSEEFQN-SPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTF 526
Query: 183 ELPGCKGIWTVY----------HKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGC +WTV K+ S+ A ++ H +LI+S E TM+L+T
Sbjct: 527 ELPGCYDMWTVIAPVRKEEEETPKAESTEQEPSAPKAEEDGRRHGFLILSREDSTMILQT 586
[34][TOP]
>UniRef100_UPI00016E67D9 UPI00016E67D9 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E67D9
Length = 1451
Score = 77.8 bits (190), Expect = 4e-13
Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 16/126 (12%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + + G + + + E+V CSGHGKNGAL VL++SIRP+++T
Sbjct: 470 ILNIGPCANASMGEPAFLSEEFQS-NPEPDLEVVVCSGHGKNGALSVLQRSIRPQVVTTF 528
Query: 183 ELPGCKGIWTVYHKSSRGHNA---------------DSSKMAADED-EYHAYLIISLEAR 314
ELPGC +WTV K + + + ++ A+ED + H +LI+S E
Sbjct: 529 ELPGCHDMWTVISKMDKDEDGEPVQKEQEETEREGKEKTEPPAEEDTKKHGFLILSREDS 588
Query: 315 TMVLET 332
TM+L+T
Sbjct: 589 TMILQT 594
[35][TOP]
>UniRef100_UPI000179DDC8 Cleavage and polyadenylation specificity factor subunit 1 (Cleavage
and polyadenylation specificity factor 160 kDa subunit)
(CPSF 160 kDa subunit). n=1 Tax=Bos taurus
RepID=UPI000179DDC8
Length = 1400
Score = 77.8 bits (190), Expect = 4e-13
Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 10/120 (8%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + A G S + + E+V CSG+GKNGAL VL++SIRP+++T
Sbjct: 427 ILNIGPCANAAMGEPAFLSEEFQN-SPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTF 485
Query: 183 ELPGCKGIWTV-------YHKSSRGHNAD---SSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGC +WTV ++ +G + + A D+ H +LI+S E TM+L+T
Sbjct: 486 ELPGCYDMWTVIAPVRKEQEETLKGEGTEPEPGAPEAEDDGRRHGFLILSREDSTMILQT 545
[36][TOP]
>UniRef100_Q4S037 Chromosome 21 SCAF14785, whole genome shotgun sequence n=1
Tax=Tetraodon nigroviridis RepID=Q4S037_TETNG
Length = 1446
Score = 77.8 bits (190), Expect = 4e-13
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 9/119 (7%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + + G G + + + E+V CSGHGKNGAL VL++SIRP+++T
Sbjct: 435 ILNIGPCANASMGEPAFLSEEFQG-NPEPDLEVVVCSGHGKNGALSVLQRSIRPQVVTTF 493
Query: 183 ELPGCKGIWTVYHK---------SSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGC +WTV S G + ++ + H +LI+S E TM+L+T
Sbjct: 494 ELPGCHDMWTVISNEVKEDKKVPQSPGSFTATHYSLEEDTKKHGFLILSREDSTMILQT 552
[37][TOP]
>UniRef100_Q10569 Cleavage and polyadenylation specificity factor subunit 1 n=2
Tax=Bos taurus RepID=CPSF1_BOVIN
Length = 1444
Score = 77.8 bits (190), Expect = 4e-13
Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 10/120 (8%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + A G S + + E+V CSG+GKNGAL VL++SIRP+++T
Sbjct: 471 ILNIGPCANAAMGEPAFLSEEFQN-SPEPDLEIVVCSGYGKNGALSVLQKSIRPQVVTTF 529
Query: 183 ELPGCKGIWTV-------YHKSSRGHNAD---SSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGC +WTV ++ +G + + A D+ H +LI+S E TM+L+T
Sbjct: 530 ELPGCYDMWTVIAPVRKEQEETLKGEGTEPEPGAPEAEDDGRRHGFLILSREDSTMILQT 589
[38][TOP]
>UniRef100_B7P5W5 Cleavage and polyadenylation specificity factor, putative n=1
Tax=Ixodes scapularis RepID=B7P5W5_IXOSC
Length = 1241
Score = 77.0 bits (188), Expect = 6e-13
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 6/116 (5%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+N+GP G T S + ELV +G+GKNGALCVL++S+RP+++T
Sbjct: 303 LINIGPCGKICMGEPAFLSEEFTQNS-DPDLELVTTAGYGKNGALCVLQRSVRPQVVTTF 361
Query: 183 ELPGCKGIWTVY----HKSSRGHNADSSKMAADE--DEYHAYLIISLEARTMVLET 332
ELPGC +WTV K + + +S + AAD HA+LI+S +M+L+T
Sbjct: 362 ELPGCVHMWTVMGPPTEKKKKEASEESDEQAADATLTNTHAFLILSRADSSMILQT 417
[39][TOP]
>UniRef100_UPI0001A230C4 cleavage and polyadenylation specific factor 1 n=1 Tax=Danio rerio
RepID=UPI0001A230C4
Length = 1449
Score = 74.7 bits (182), Expect = 3e-12
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + G + + + E+V CSG+GKNGAL VL++SIRP+++T
Sbjct: 469 ILNIGPCASASMGEPAFLSEEFQ-TNPEPDLEVVVCSGYGKNGALSVLQKSIRPQVVTTF 527
Query: 183 ELPGCKGIWTVYHKSSR---------GHNADSSK---MAADEDEYHAYLIISLEARTMVL 326
ELPGC +WTV + + G + + K D+ + H +LI+S E TM+L
Sbjct: 528 ELPGCHDMWTVIYCEEKPEKPSAEGDGESPEEEKREPTIEDDKKKHGFLILSREDSTMIL 587
Query: 327 ET 332
+T
Sbjct: 588 QT 589
[40][TOP]
>UniRef100_UPI0000E45ED0 PREDICTED: similar to cleavage and polyadenylation specificity
factor 1 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E45ED0
Length = 1220
Score = 74.7 bits (182), Expect = 3e-12
Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+N+GP + G G + + ELV SG+GKNGAL VL+++IRP+++T
Sbjct: 250 LLNIGPCGNMIMGEPAFLSEEFQG-NVDPDLELVTTSGYGKNGALSVLQRTIRPQVVTTF 308
Query: 183 ELPGCKGIWTV--YHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
LPGC +WTV ++ ++ S+ + ++ + HA+LI+S + +MVL+T
Sbjct: 309 NLPGCLDMWTVKSLKEAKADEKSEESEASPEDKDRHAFLILSKQDSSMVLQT 360
[41][TOP]
>UniRef100_UPI0001A2C96E UPI0001A2C96E related cluster n=1 Tax=Danio rerio
RepID=UPI0001A2C96E
Length = 412
Score = 74.7 bits (182), Expect = 3e-12
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + G + + + E+V CSG+GKNGAL VL++SIRP+++T
Sbjct: 79 ILNIGPCASASMGEPAFLSEEFQ-TNPEPDLEVVVCSGYGKNGALSVLQKSIRPQVVTTF 137
Query: 183 ELPGCKGIWTVYHKSSR---------GHNADSSK---MAADEDEYHAYLIISLEARTMVL 326
ELPGC +WTV + + G + + K D+ + H +LI+S E TM+L
Sbjct: 138 ELPGCHDMWTVIYCEEKPEKPSAEGDGESPEEEKREPTIEDDKKKHGFLILSREDSTMIL 197
Query: 327 ET 332
+T
Sbjct: 198 QT 199
[42][TOP]
>UniRef100_B8JLC1 Cleavage and polyadenylation specific factor 1 (Fragment) n=2
Tax=Danio rerio RepID=B8JLC1_DANRE
Length = 985
Score = 74.7 bits (182), Expect = 3e-12
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + G + + + E+V CSG+GKNGAL VL++SIRP+++T
Sbjct: 5 ILNIGPCASASMGEPAFLSEEFQ-TNPEPDLEVVVCSGYGKNGALSVLQKSIRPQVVTTF 63
Query: 183 ELPGCKGIWTVYHKSSR---------GHNADSSK---MAADEDEYHAYLIISLEARTMVL 326
ELPGC +WTV + + G + + K D+ + H +LI+S E TM+L
Sbjct: 64 ELPGCHDMWTVIYCEEKPEKPSAEGDGESPEEEKREPTIEDDKKKHGFLILSREDSTMIL 123
Query: 327 ET 332
+T
Sbjct: 124 QT 125
[43][TOP]
>UniRef100_Q6DRG0 Cleavage and polyadenylation specific factor 1 (Fragment) n=1
Tax=Danio rerio RepID=Q6DRG0_DANRE
Length = 1105
Score = 74.7 bits (182), Expect = 3e-12
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + G + + + E+V CSG+GKNGAL VL++SIRP+++T
Sbjct: 125 ILNIGPCASASMGEPAFLSEEFQ-TNPEPDLEVVVCSGYGKNGALSVLQKSIRPQVVTTF 183
Query: 183 ELPGCKGIWTVYHKSSR---------GHNADSSK---MAADEDEYHAYLIISLEARTMVL 326
ELPGC +WTV + + G + + K D+ + H +LI+S E TM+L
Sbjct: 184 ELPGCHDMWTVIYCEEKPEKPSAEGDGESPEEEKREPTIEDDKKKHGFLILSREDSTMIL 243
Query: 327 ET 332
+T
Sbjct: 244 QT 245
[44][TOP]
>UniRef100_A8WFR1 Cpsf1 protein n=1 Tax=Danio rerio RepID=A8WFR1_DANRE
Length = 400
Score = 74.7 bits (182), Expect = 3e-12
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + G + + + E+V CSG+GKNGAL VL++SIRP+++T
Sbjct: 79 ILNIGPCASASMGEPAFLSEEFQ-TNPEPDLEVVVCSGYGKNGALSVLQKSIRPQVVTTF 137
Query: 183 ELPGCKGIWTVYHKSSR---------GHNADSSK---MAADEDEYHAYLIISLEARTMVL 326
ELPGC +WTV + + G + + K D+ + H +LI+S E TM+L
Sbjct: 138 ELPGCHDMWTVIYCEEKPEKPSAEGDGESPEEEKREPTIEDDKKKHGFLILSREDSTMIL 197
Query: 327 ET 332
+T
Sbjct: 198 QT 199
[45][TOP]
>UniRef100_UPI00015B4ECC PREDICTED: similar to cleavage and polyadenylation specificity
factor cpsf n=1 Tax=Nasonia vitripennis
RepID=UPI00015B4ECC
Length = 1596
Score = 74.3 bits (181), Expect = 4e-12
Identities = 41/110 (37%), Positives = 65/110 (59%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+N+GP + + G + S + + ELV SG+GKNGALCVL++SIRP++IT
Sbjct: 475 LLNIGPCGNISMGEPAFLSEEFSNNS-EPDVELVTTSGYGKNGALCVLQRSIRPQVITTF 533
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
+LPG + IWTV + ++ + + H +LI++ + TMVL+T
Sbjct: 534 DLPGYENIWTVIDST-----VSDNRAKTETEGTHGFLILTQDDSTMVLQT 578
[46][TOP]
>UniRef100_A8XPU7 C. briggsae CBR-CPSF-1 protein n=1 Tax=Caenorhabditis briggsae
RepID=A8XPU7_CAEBR
Length = 1454
Score = 74.3 bits (181), Expect = 4e-12
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSN--YELVCCSGHGKNGALCVLRQSIRPEMIT 176
L+NVGPVK +G R N +N +K+ + ++LV SGHGKNGALCV ++S+RPE+IT
Sbjct: 443 LLNVGPVKSMCFG-RPNYMSNDLIDAKRKDPVFDLVTASGHGKNGALCVHQRSMRPEIIT 501
Query: 177 EVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLE 329
L G + +W V K E+E H YLI+S T++LE
Sbjct: 502 SSLLEGAEQLWAVGRK---------------ENESHKYLIVSRVRSTLILE 537
[47][TOP]
>UniRef100_UPI000180B488 PREDICTED: similar to cleavage and polyadenylation specificity
factor 1, partial n=1 Tax=Ciona intestinalis
RepID=UPI000180B488
Length = 1370
Score = 73.9 bits (180), Expect = 5e-12
Identities = 44/111 (39%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVS-KQSNYELVCCSGHGKNGALCVLRQSIRPEMITE 179
LVN+GP A L A + VS ++S+ EL SGHGKNGA+ VL++S++P+++T
Sbjct: 464 LVNIGPCG--AAELGEPAFLSEEFVSQRESDLELAILSGHGKNGAISVLQRSVKPQVVTT 521
Query: 180 VELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
ELPGC +WTV + + + + H+YLI+S E T++LET
Sbjct: 522 FELPGCIDMWTVKSVCEK-----TELPTKTQQQQHSYLILSREESTLILET 567
[48][TOP]
>UniRef100_UPI00017B0BFA UPI00017B0BFA related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0BFA
Length = 1454
Score = 73.9 bits (180), Expect = 5e-12
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + + G G + + + E+V CSGHGKNGAL VL++SIRP+++T
Sbjct: 469 ILNIGPCANASMGEPAFLSEEFQG-NPEPDLEVVVCSGHGKNGALSVLQRSIRPQVVTTF 527
Query: 183 ELPGCKGIWTVYHK-------------SSRGHNADSSKMAADEDEYHAYLIISLEARTMV 323
ELPGC +WTV S + ++ + H +LI+S E TM+
Sbjct: 528 ELPGCHDMWTVISNEVKEDKKVPQSPGSFTATHYSLEPPPEEDTKKHGFLILSREDSTMI 587
Query: 324 LET 332
L+T
Sbjct: 588 LQT 590
[49][TOP]
>UniRef100_UPI0000D55956 PREDICTED: similar to cleavage and polyadenylation specificity
factor cpsf n=1 Tax=Tribolium castaneum
RepID=UPI0000D55956
Length = 1413
Score = 72.8 bits (177), Expect = 1e-11
Identities = 42/110 (38%), Positives = 64/110 (58%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+N+GP + + G + + + ELV +G+GKNGALCVL++S+RP+++T
Sbjct: 482 LLNIGPCGNISLGEPAFLSEEFSE-NLDLDLELVTTAGYGKNGALCVLQKSVRPQIVTTF 540
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
LPGC +WTV+ A ED+ HA+LI+S E TM+L+T
Sbjct: 541 TLPGCSNMWTVH---------------AGEDK-HAFLILSQEDGTMILQT 574
[50][TOP]
>UniRef100_A4RZM9 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RZM9_OSTLU
Length = 1386
Score = 72.8 bits (177), Expect = 1e-11
Identities = 39/113 (34%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+ V PV D A G + G +K EL+ G GKNGAL +L + ++PE++TEV
Sbjct: 472 LLGVAPVVDIAVGA-----SAPMGSNKNERTELITACGQGKNGALAILTRGVQPELVTEV 526
Query: 183 E---LPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
E LP +G+WT++++ + SK + + +H +L++S+++ TM++ET
Sbjct: 527 ESGTLPNLQGLWTLHYRK------EGSK--EEREPFHHHLLLSMKSSTMIMET 571
[51][TOP]
>UniRef100_B3S6P9 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3S6P9_TRIAD
Length = 1187
Score = 72.8 bits (177), Expect = 1e-11
Identities = 41/110 (37%), Positives = 64/110 (58%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
+++VGP A G +T V ++S+ E+V CSGH KNGAL VL + I+P+++
Sbjct: 384 ILHVGPCASIAIG------QISTFVQEESDVEVVICSGHDKNGALSVLNKGIKPQVVASY 437
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
+LPGC +WTV K R ++ + + + H +LIIS + TM+L T
Sbjct: 438 DLPGCVDMWTV--KDIRLNDENDGDF--ETENTHKFLIISRDNLTMILRT 483
[52][TOP]
>UniRef100_Q17N25 Cleavage and polyadenylation specificity factor cpsf n=1 Tax=Aedes
aegypti RepID=Q17N25_AEDAE
Length = 1417
Score = 72.0 bits (175), Expect = 2e-11
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATG-----VSKQSNYELVCCSGHGKNGALCVLRQSIRPE 167
++N+GP+ A G RI+ + V + + E+V SGHGKNGALCVL+ SI+P+
Sbjct: 460 ILNIGPIGHMAVGERISEEEQDENKDVQFVPNKLDLEIVTSSGHGKNGALCVLQNSIKPQ 519
Query: 168 MITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
+IT L GC D D+ H+++I+S EA TMVL+T
Sbjct: 520 VITSFGLSGC----------------------LDVDDMHSFMILSQEAGTMVLQT 552
[53][TOP]
>UniRef100_Q9N4C2 Probable cleavage and polyadenylation specificity factor subunit 1
n=1 Tax=Caenorhabditis elegans RepID=CPSF1_CAEEL
Length = 1454
Score = 71.6 bits (174), Expect = 3e-11
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSN--YELVCCSGHGKNGALCVLRQSIRPEMIT 176
L NVGPVK G R N +N +K+ + ++LV SGHGKNGALCV ++S+RPE+IT
Sbjct: 446 LRNVGPVKSMCVG-RPNYMSNDLVDAKRRDPVFDLVTASGHGKNGALCVHQRSLRPEIIT 504
Query: 177 EVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLE 329
L G + +W V K E+E H YLI+S T++LE
Sbjct: 505 SSLLEGAEQLWAVGRK---------------ENESHKYLIVSRVRSTLILE 540
[54][TOP]
>UniRef100_B4KT60 GI18959 n=1 Tax=Drosophila mojavensis RepID=B4KT60_DROMO
Length = 1431
Score = 70.1 bits (170), Expect = 7e-11
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSN------YELVCCSGHGKNGALCVLRQSIRP 164
L+NV P+ G R+ + + T + + ELV +GH KNGAL V I P
Sbjct: 464 LINVAPINYMCAGERVEFEEDGTTLRPHAESLTDLKIELVAATGHSKNGALSVFVNCINP 523
Query: 165 EMITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
++IT EL GC +WTV+ ++R K + E H ++++S + T+VL+T
Sbjct: 524 QIITSFELDGCLDVWTVFDDATR-------KPSTARQEQHDFMLLSQRSSTLVLQT 572
[55][TOP]
>UniRef100_Q54TS6 CPSF domain-containing protein n=1 Tax=Dictyostelium discoideum
RepID=Q54TS6_DICDI
Length = 1628
Score = 68.9 bits (167), Expect = 2e-10
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNY-----ELVCCSGHGKNGALCVLRQSIRPE 167
++N+GP+ D G I+ + T Q Y ELV CSG+GKNG++ VL+ +I+PE
Sbjct: 582 IINIGPIGDIVVGQSIDPTYDETIQPNQPEYVPKTLELVTCSGYGKNGSISVLQNNIKPE 641
Query: 168 MITEVELPGCKGIWTVY 218
++ ELPG +WTVY
Sbjct: 642 LVMAFELPGILNVWTVY 658
[56][TOP]
>UniRef100_Q5RFK8 Putative uncharacterized protein DKFZp469K0832 (Fragment) n=1
Tax=Pongo abelii RepID=Q5RFK8_PONAB
Length = 565
Score = 68.2 bits (165), Expect = 3e-10
Identities = 38/92 (41%), Positives = 52/92 (56%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + A G S + + E+V CSGHGKNGAL VL++SIRP+++T
Sbjct: 469 ILNIGPCANAAMGEPAFLSEEFQN-SPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTF 527
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDE 278
ELPGC +WTV R D+ K E E
Sbjct: 528 ELPGCYDMWTVI-APLRKEEEDNPKGEGTEQE 558
[57][TOP]
>UniRef100_B4LJU3 GJ21566 n=1 Tax=Drosophila virilis RepID=B4LJU3_DROVI
Length = 1420
Score = 68.2 bits (165), Expect = 3e-10
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSN------YELVCCSGHGKNGALCVLRQSIRP 164
L+NV P+ G R+ + + + + + ELV +GH KNGAL V I P
Sbjct: 454 LINVAPINYMCAGERVEFEEDGSTLRPHAESLNEVKIELVAATGHSKNGALSVFVNCINP 513
Query: 165 EMITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
++IT EL GC +WTV+ ++R K E H ++++S + T+VL+T
Sbjct: 514 QIITSFELDGCLDVWTVFDDATR-------KPTTARQEQHDFMLLSQRSSTLVLQT 562
[58][TOP]
>UniRef100_B4NN81 GK23274 n=1 Tax=Drosophila willistoni RepID=B4NN81_DROWI
Length = 1463
Score = 67.8 bits (164), Expect = 4e-10
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSN------YELVCCSGHGKNGALCVLRQSIRP 164
L+NV P+ G R+ + + T + + ELV +GH KNGAL V I P
Sbjct: 495 LINVAPINYMCAGERVEFEEDGTTLRPHAESLQDVKIELVAATGHSKNGALSVFVNCINP 554
Query: 165 EMITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
++IT EL GC +WTV+ D++K + +D+ H ++++S + T+VL+T
Sbjct: 555 QIITSFELEGCLDVWTVFD--------DATKKTSRQDQ-HDFMLLSQKNSTLVLQT 601
[59][TOP]
>UniRef100_B4JW88 GH22991 n=1 Tax=Drosophila grimshawi RepID=B4JW88_DROGR
Length = 1426
Score = 67.4 bits (163), Expect = 5e-10
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSN------YELVCCSGHGKNGALCVLRQSIRP 164
L+NV P+ G R+ + + + ++ ELV +GH KNGAL V I P
Sbjct: 460 LINVAPINYMCAGERVEFEEDGATLRPHADNLNDLKIELVAATGHSKNGALSVFVNCINP 519
Query: 165 EMITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
++IT EL GC +WTV+ ++R K + H ++++S + T+VL+T
Sbjct: 520 QIITSFELEGCLDVWTVFDDATR-------KATTARQDQHDFMLLSQRSSTLVLQT 568
[60][TOP]
>UniRef100_UPI00017935BA PREDICTED: similar to cleavage and polyadenylation specificity
factor cpsf n=1 Tax=Acyrthosiphon pisum
RepID=UPI00017935BA
Length = 1335
Score = 66.6 bits (161), Expect = 8e-10
Identities = 35/110 (31%), Positives = 60/110 (54%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
++N+GP + G + S + + EL+C SGHGKNGAL VL +SI+P+++T
Sbjct: 431 IINIGPCSQASIGEPAYISDEFS--SDEHDVELLCTSGHGKNGALSVLHRSIKPQLVTTF 488
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
L G K +WTV+ E+++H ++I++ T++L+T
Sbjct: 489 HLDGYKDMWTVH----------------GENDFHTFMILTNVDSTLILQT 522
[61][TOP]
>UniRef100_Q291E2 GA10080 n=1 Tax=Drosophila pseudoobscura pseudoobscura
RepID=Q291E2_DROPS
Length = 1459
Score = 66.6 bits (161), Expect = 8e-10
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSN------YELVCCSGHGKNGALCVLRQSIRP 164
L+NV P+ G R+ + + T + + ELV +GH KNGAL V I P
Sbjct: 493 LINVAPINYMCAGERVEFEEDGTTLRPHAENLHDLKIELVAATGHSKNGALSVFVNCINP 552
Query: 165 EMITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
++IT EL GC +WTV+ D++K + D+ H ++++S T+VL+T
Sbjct: 553 QIITSFELDGCLDVWTVFD--------DATKKTSRHDQ-HDFMLLSQSNSTLVLQT 599
[62][TOP]
>UniRef100_B4GAU6 GL10645 n=1 Tax=Drosophila persimilis RepID=B4GAU6_DROPE
Length = 1459
Score = 66.6 bits (161), Expect = 8e-10
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSN------YELVCCSGHGKNGALCVLRQSIRP 164
L+NV P+ G R+ + + T + + ELV +GH KNGAL V I P
Sbjct: 493 LINVAPINYMCAGERVEFEEDGTTLRPHAENLHDLKIELVAATGHSKNGALSVFVNCINP 552
Query: 165 EMITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
++IT EL GC +WTV+ D++K + D+ H ++++S T+VL+T
Sbjct: 553 QIITSFELDGCLDVWTVFD--------DATKKTSRHDQ-HDFMLLSQSNSTLVLQT 599
[63][TOP]
>UniRef100_B3ME15 GF11349 n=1 Tax=Drosophila ananassae RepID=B3ME15_DROAN
Length = 1455
Score = 66.6 bits (161), Expect = 8e-10
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSN------YELVCCSGHGKNGALCVLRQSIRP 164
L+NV P+ G R+ + + T + + ELV +GH KNGAL V I P
Sbjct: 490 LINVAPINYMCAGERVEFEEDGTTLRPHAENLNDLKIELVAATGHSKNGALSVFVNCINP 549
Query: 165 EMITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
++IT EL GC +WTV+ D++K + D+ H ++++S T+VL+T
Sbjct: 550 QIITSFELDGCLDVWTVFD--------DATKKTSRHDQ-HDFMLLSQRNSTLVLQT 596
[64][TOP]
>UniRef100_A8NVU8 CPSF A subunit region family protein n=1 Tax=Brugia malayi
RepID=A8NVU8_BRUMA
Length = 1323
Score = 65.9 bits (159), Expect = 1e-09
Identities = 39/110 (35%), Positives = 53/110 (48%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+NVGP K G + K ++LVC GHGK G++C+L++SIRPE+IT
Sbjct: 436 LLNVGPCKKITGGCPSVSAYFQEITRKDPLFDLVCACGHGKFGSICILQRSIRPEIITSS 495
Query: 183 ELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
+ G W V + ED+ H Y I S E T+ LET
Sbjct: 496 SIEGVVQYWAVGRR---------------EDDTHMYFIASRELGTLALET 530
[65][TOP]
>UniRef100_B3NR35 GG22421 n=1 Tax=Drosophila erecta RepID=B3NR35_DROER
Length = 1455
Score = 64.7 bits (156), Expect = 3e-09
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSN------YELVCCSGHGKNGALCVLRQSIRP 164
L+NV PV G R+ + + + + ELV +GH KNGAL V I P
Sbjct: 490 LMNVAPVNYMCAGERVEFEEDGATLRPHAESLQDVKIELVAATGHSKNGALSVFVNCINP 549
Query: 165 EMITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
++IT EL GC +WTV+ D++K ++ D+ H ++++S T+VL+T
Sbjct: 550 QIITSFELDGCLDVWTVFD--------DATKKSSRNDQ-HDFMLLSQRNSTLVLQT 596
[66][TOP]
>UniRef100_B4P767 GE12310 n=1 Tax=Drosophila yakuba RepID=B4P767_DROYA
Length = 1455
Score = 64.3 bits (155), Expect = 4e-09
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSN------YELVCCSGHGKNGALCVLRQSIRP 164
L+NV P+ G R+ + + + + ELV +GH KNGAL V I P
Sbjct: 490 LMNVAPINYMCAGERVEFEEDGATLRPHAESLQDLKIELVAATGHSKNGALSVFVNCINP 549
Query: 165 EMITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
++IT EL GC +WTV+ D++K ++ D+ H ++++S T+VL+T
Sbjct: 550 QIITSFELDGCLDVWTVFD--------DATKKSSRNDQ-HDFMLLSQRNSTLVLQT 596
[67][TOP]
>UniRef100_Q9V726-2 Isoform B of Cleavage and polyadenylation specificity factor
subunit 1 n=1 Tax=Drosophila melanogaster RepID=Q9V726-2
Length = 1420
Score = 64.3 bits (155), Expect = 4e-09
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSN------YELVCCSGHGKNGALCVLRQSIRP 164
L+NV P+ G R+ + + + + ELV +GH KNGAL V I P
Sbjct: 455 LMNVAPINYMCAGERVEFEEDGVTLRPHAESLQDLKIELVAATGHSKNGALSVFVNCINP 514
Query: 165 EMITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
++IT EL GC +WTV+ D++K ++ D+ H ++++S T+VL+T
Sbjct: 515 QIITSFELDGCLDVWTVFD--------DATKKSSRNDQ-HDFMLLSQRNSTLVLQT 561
[68][TOP]
>UniRef100_Q9V726 Cleavage and polyadenylation specificity factor subunit 1 n=1
Tax=Drosophila melanogaster RepID=CPSF1_DROME
Length = 1455
Score = 64.3 bits (155), Expect = 4e-09
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSN------YELVCCSGHGKNGALCVLRQSIRP 164
L+NV P+ G R+ + + + + ELV +GH KNGAL V I P
Sbjct: 490 LMNVAPINYMCAGERVEFEEDGVTLRPHAESLQDLKIELVAATGHSKNGALSVFVNCINP 549
Query: 165 EMITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
++IT EL GC +WTV+ D++K ++ D+ H ++++S T+VL+T
Sbjct: 550 QIITSFELDGCLDVWTVFD--------DATKKSSRNDQ-HDFMLLSQRNSTLVLQT 596
[69][TOP]
>UniRef100_UPI0001869044 hypothetical protein BRAFLDRAFT_130672 n=1 Tax=Branchiostoma
floridae RepID=UPI0001869044
Length = 1357
Score = 63.9 bits (154), Expect = 5e-09
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 23/102 (22%)
Frame = +3
Query: 96 ELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTV---------YHKSSRGHNAD 248
ELV G+GKNGAL VL++SIRP+++T +LPGC +WTV + + +A
Sbjct: 402 ELVTTCGYGKNGALAVLQRSIRPQVVTTFDLPGCLDMWTVIGIPPESKPQEEGEKAESAG 461
Query: 249 SSKMAADEDE--------------YHAYLIISLEARTMVLET 332
S + E E H +LI+S E TMVL+T
Sbjct: 462 SEEKPESEKEETKEEGPPDVDLTNSHGFLILSREDSTMVLQT 503
[70][TOP]
>UniRef100_C3XUG8 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3XUG8_BRAFL
Length = 1003
Score = 63.5 bits (153), Expect = 7e-09
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 23/102 (22%)
Frame = +3
Query: 96 ELVCCSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTV---------YHKSSRGHNAD 248
ELV G+GKNGAL VL++SIRP+++T +LPGC +WTV + + +A
Sbjct: 78 ELVTTCGYGKNGALAVLQRSIRPQVVTTFDLPGCLDMWTVIGIPPESKPQEEGEKAESAG 137
Query: 249 SSKMAADEDE--------------YHAYLIISLEARTMVLET 332
S + E E H +LI+S E TMVL+T
Sbjct: 138 SEEKPEGEKEETKEEGPPDVDLTNSHGFLILSREDSTMVLQT 179
[71][TOP]
>UniRef100_B4QFU9 GD25678 n=1 Tax=Drosophila simulans RepID=B4QFU9_DROSI
Length = 1450
Score = 63.5 bits (153), Expect = 7e-09
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSN------YELVCCSGHGKNGALCVLRQSIRP 164
L+NV P+ G R+ + + + + ELV +GH KNGAL V + P
Sbjct: 490 LMNVAPINYMCAGERVEFEEDGVTLRPHAESLQDLKIELVAATGHSKNGALSVFVNCLNP 549
Query: 165 EMITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
++IT EL GC +WTV+ D++K ++ D+ H ++++S T+VL+T
Sbjct: 550 QIITSFELDGCLDVWTVFD--------DATKKSSRNDQ-HDFMLLSQRNSTLVLQT 596
[72][TOP]
>UniRef100_B4HRD9 GM20208 n=1 Tax=Drosophila sechellia RepID=B4HRD9_DROSE
Length = 1455
Score = 62.8 bits (151), Expect = 1e-08
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSN------YELVCCSGHGKNGALCVLRQSIRP 164
L+NV P+ G R+ + + + + ELV +GH KNGAL V + P
Sbjct: 490 LMNVAPINYMCAGERVEFEEDGVTLRPHAESLQDLKIELVAATGHSKNGALSVFVNCLNP 549
Query: 165 EMITEVELPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLET 332
++IT EL GC +WTV+ D++K ++ D+ H ++ +S T+VL+T
Sbjct: 550 QIITSFELDGCLDVWTVFD--------DATKKSSRNDQ-HDFMFLSQRNSTLVLQT 596
[73][TOP]
>UniRef100_B6K3P3 Cleavage factor one Cft1 n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6K3P3_SCHJY
Length = 1431
Score = 60.8 bits (146), Expect = 4e-08
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNY---ELVCCSGHGKNGALCVLRQSIRPEMI 173
L NVGP+ +F G A + Q N+ E+ C +G GK+G+L V R+SI P +
Sbjct: 497 LSNVGPIIEFCTG-----KAGSLAYFPQDNHGPLEVTCVTGTGKSGSLVVFRRSISPVVE 551
Query: 174 TEVELPGCKGIWTVY----HKSSRGHNADSSKMAADEDEYHAYLIISLEARTMV 323
+ GC+ +WT++ K+ R H ++ +DEY YL++S E + V
Sbjct: 552 GKFNFEGCQSLWTIHVTGRLKNPRSHGSERYL----DDEYDTYLVVSKEKESFV 601
[74][TOP]
>UniRef100_UPI00015C35FC hypothetical protein NCU02082 n=1 Tax=Neurospora crassa OR74A
RepID=UPI00015C35FC
Length = 1437
Score = 55.5 bits (132), Expect = 2e-06
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINA-----DANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPE 167
L+++ P++ YG + + N+ GV +S+ +LVC G GK AL ++ +I+P+
Sbjct: 533 LLSIAPIQKMTYGQPVTLPDSEEERNSEGV--RSDLQLVCAVGRGKASALAIMNLAIQPK 590
Query: 168 MITEVELPGCKGIWTVYHKS--SRGHNADSSKMAADED---EYHAYLIIS 302
+I E P +G WTV K + D M D D +YH ++I++
Sbjct: 591 IIGRFEFPEARGFWTVCAKKPIPKTLVGDKGPMNNDYDTSGQYHKFMIVA 640
[75][TOP]
>UniRef100_Q7SEY2 Protein cft-1 n=1 Tax=Neurospora crassa RepID=CFT1_NEUCR
Length = 1456
Score = 55.5 bits (132), Expect = 2e-06
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINA-----DANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPE 167
L+++ P++ YG + + N+ GV +S+ +LVC G GK AL ++ +I+P+
Sbjct: 533 LLSIAPIQKMTYGQPVTLPDSEEERNSEGV--RSDLQLVCAVGRGKASALAIMNLAIQPK 590
Query: 168 MITEVELPGCKGIWTVYHKS--SRGHNADSSKMAADED---EYHAYLIIS 302
+I E P +G WTV K + D M D D +YH ++I++
Sbjct: 591 IIGRFEFPEARGFWTVCAKKPIPKTLVGDKGPMNNDYDTSGQYHKFMIVA 640
[76][TOP]
>UniRef100_Q015W4 Cleavage and polyadenylation specificity factor (ISS) (Fragment)
n=1 Tax=Ostreococcus tauri RepID=Q015W4_OSTTA
Length = 1473
Score = 55.1 bits (131), Expect = 2e-06
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Frame = +3
Query: 3 LVNVGPVKDFAYGLRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEV 182
L+ V PV D G + G ELV G GKNGAL +L + ++PE++TEV
Sbjct: 325 LLGVAPVVDITVGA-----SAPVGTDTAERTELVTACGQGKNGALAILTRGVQPELVTEV 379
Query: 183 E---LPGCKGIWTVYHKSSRGHNADSSKMAADEDEYHAYLIISLEARTMVLE 329
E LP +G+W ++ + + +H +L++ L+ + LE
Sbjct: 380 EAGTLPTLQGLWALHDRKEGTREV--------REPFHNHLLLKLQEVSASLE 423
[77][TOP]
>UniRef100_A6RN39 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
B05.10 RepID=A6RN39_BOTFB
Length = 1153
Score = 54.3 bits (129), Expect = 4e-06
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Frame = +3
Query: 3 LVNVGPVKDFAYG---LRINADANATGVSKQSNYELVCCSGHGKNGALCVLRQSIRPEMI 173
+VN+ P+ + A+G L + D QS +LV G K G+L V+ + I+P +I
Sbjct: 235 MVNIAPITNIAFGEAALSLGKDEELKSSGVQSELQLVAAVGREKGGSLAVINREIQPNVI 294
Query: 174 TEVELPGCKGIWTVYHK--SSRGHNADSSKMAADED-----EYHAYLIIS 302
+LP +GIWT+ K + +G + K D +Y +I+S
Sbjct: 295 GRFDLPEARGIWTMSAKRPAPKGLQVNKEKSVTSGDYGVDAQYDRLMIVS 344