[UP]
[1][TOP]
>UniRef100_Q8L7S8-2 Isoform 2 of DEAD-box ATP-dependent RNA helicase 3 n=1
Tax=Arabidopsis thaliana RepID=Q8L7S8-2
Length = 747
Score = 329 bits (843), Expect = 9e-89
Identities = 169/169 (100%), Positives = 169/169 (100%)
Frame = +3
Query: 33 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS 212
MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS
Sbjct: 1 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS 60
Query: 213 AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR 392
AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR
Sbjct: 61 AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR 120
Query: 393 GITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAG 539
GITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAG
Sbjct: 121 GITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAG 169
[2][TOP]
>UniRef100_Q8L7S8 DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Arabidopsis thaliana
RepID=RH3_ARATH
Length = 748
Score = 329 bits (843), Expect = 9e-89
Identities = 169/169 (100%), Positives = 169/169 (100%)
Frame = +3
Query: 33 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS 212
MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS
Sbjct: 1 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS 60
Query: 213 AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR 392
AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR
Sbjct: 61 AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR 120
Query: 393 GITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAG 539
GITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAG
Sbjct: 121 GITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAG 169
[3][TOP]
>UniRef100_B9RFT3 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus
communis RepID=B9RFT3_RICCO
Length = 772
Score = 169 bits (429), Expect = 9e-41
Identities = 107/187 (57%), Positives = 127/187 (67%), Gaps = 21/187 (11%)
Frame = +3
Query: 36 ASTVGVPSLYQVPHLEISKPNSKKRSNCLSL-SLDKPFFTPLSLV------RRTRRIHSS 194
+S +GV S++ P +E+S + K S LS+ + DKP F L L + H
Sbjct: 4 SSVLGVSSIFHTPSVELS--SRKTNSTTLSIPTTDKPHFNSLVLQSCSLYNNKHGHGHGH 61
Query: 195 SLLVPSAVATPNSVLSEEAFKSLG--LSDHDEYDLDGDNNNVEA----DDG--------E 332
S V SA+A PNS+LSEEAFK LG LSD DE D DN++V + DDG +
Sbjct: 62 SSFVTSAIAAPNSILSEEAFKGLGGRLSDFDE---DEDNDDVSSGGYEDDGAGESLPDDD 118
Query: 333 ELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPI 512
ELAISKL LPQRL ESLEKRGITHLFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIPI
Sbjct: 119 ELAISKLGLPQRLVESLEKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPI 178
Query: 513 IKRLTEE 533
IK +TE+
Sbjct: 179 IKCITED 185
[4][TOP]
>UniRef100_UPI0001984A30 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984A30
Length = 764
Score = 158 bits (400), Expect = 2e-37
Identities = 98/184 (53%), Positives = 124/184 (67%), Gaps = 18/184 (9%)
Frame = +3
Query: 36 ASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVR--RTRRIHSSSL--- 200
+S +GV S+YQ LE+S+ R++ SLSL T L + + TR + +SL
Sbjct: 3 SSIIGVSSVYQTTALELSR-----RTSAHSLSLPFSDKTHLGVFKAPNTRVLSDASLRRS 57
Query: 201 ------LVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVE-------ADDGEELA 341
VPSA+ATPNSVLSEEAFK LG D D+ +++ + A +ELA
Sbjct: 58 FKQGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAAQEDELA 117
Query: 342 ISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKR 521
+++L LP RL ESLE+RGITHLFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIPIIKR
Sbjct: 118 LAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKR 177
Query: 522 LTEE 533
L+E+
Sbjct: 178 LSED 181
[5][TOP]
>UniRef100_A7PRF1 Chromosome chr14 scaffold_27, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PRF1_VITVI
Length = 762
Score = 158 bits (400), Expect = 2e-37
Identities = 98/184 (53%), Positives = 124/184 (67%), Gaps = 18/184 (9%)
Frame = +3
Query: 36 ASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVR--RTRRIHSSSL--- 200
+S +GV S+YQ LE+S+ R++ SLSL T L + + TR + +SL
Sbjct: 3 SSIIGVSSVYQTTALELSR-----RTSAHSLSLPFSDKTHLGVFKAPNTRVLSDASLRRS 57
Query: 201 ------LVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVE-------ADDGEELA 341
VPSA+ATPNSVLSEEAFK LG D D+ +++ + A +ELA
Sbjct: 58 FKQGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAAQEDELA 117
Query: 342 ISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKR 521
+++L LP RL ESLE+RGITHLFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIPIIKR
Sbjct: 118 LAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKR 177
Query: 522 LTEE 533
L+E+
Sbjct: 178 LSED 181
[6][TOP]
>UniRef100_A5C4J0 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5C4J0_VITVI
Length = 786
Score = 158 bits (400), Expect = 2e-37
Identities = 98/184 (53%), Positives = 124/184 (67%), Gaps = 18/184 (9%)
Frame = +3
Query: 36 ASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVR--RTRRIHSSSL--- 200
+S +GV S+YQ LE+S+ R++ SLSL T L + + TR + +SL
Sbjct: 3 SSIIGVSSVYQTTALELSR-----RTSAHSLSLPFSDKTHLGVFKAPNTRVLSDASLRRS 57
Query: 201 ------LVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVE-------ADDGEELA 341
VPSA+ATPNSVLSEEAFK LG D D+ +++ + A +ELA
Sbjct: 58 FKQGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAAQEDELA 117
Query: 342 ISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKR 521
+++L LP RL ESLE+RGITHLFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIPIIKR
Sbjct: 118 LAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKR 177
Query: 522 LTEE 533
L+E+
Sbjct: 178 LSED 181
[7][TOP]
>UniRef100_B9N3Y9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Y9_POPTR
Length = 735
Score = 145 bits (366), Expect = 2e-33
Identities = 87/161 (54%), Positives = 108/161 (67%), Gaps = 19/161 (11%)
Frame = +3
Query: 111 SNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLV--------PSAVATPNSVLSEEAFKSLG 266
S+ LS P F SL+ +T+ SL++ PSA+ATPN +LSEEAFK G
Sbjct: 6 SSASFLSEKPPHFN--SLIAKTQLSFKHSLIINTNSTFTPPSAIATPNPILSEEAFK--G 61
Query: 267 LSDHDEYDLDGDNNN-VEADDGE----------ELAISKLSLPQRLEESLEKRGITHLFP 413
L +++ D D ++ V+ D E EL ISKL LPQRL ++L+ RGITHLFP
Sbjct: 62 LDGFSDFEADADTDDAVDYDSSETEPNSNTSEDELDISKLGLPQRLVQTLQNRGITHLFP 121
Query: 414 IQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 536
IQRAVL+P L+GRD+IARAKTGTGKTLAFGIPIIKRLTE+A
Sbjct: 122 IQRAVLIPTLEGRDLIARAKTGTGKTLAFGIPIIKRLTEDA 162
[8][TOP]
>UniRef100_B9N3Z4 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Z4_POPTR
Length = 775
Score = 144 bits (362), Expect = 5e-33
Identities = 81/127 (63%), Positives = 95/127 (74%), Gaps = 11/127 (8%)
Frame = +3
Query: 189 SSSLLVPSAVATPNSVLSEEAFKSL-GLSDHDEYDLDGDNNNVEADDGE----------E 335
SSS PSA+A+PNS+LSEEAFK L G SD E D+D +V+ E E
Sbjct: 74 SSSFSPPSAIASPNSILSEEAFKGLDGFSDF-EADVDAGGADVDYASSETEPSSNTSEDE 132
Query: 336 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
L +SKL LP RL ++L+ RGITHLFPIQRAVL+PAL+GRD+IARAKTGTGKTLAFGIPII
Sbjct: 133 LDVSKLGLPHRLVQTLQNRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFGIPII 192
Query: 516 KRLTEEA 536
KRLTE+A
Sbjct: 193 KRLTEDA 199
[9][TOP]
>UniRef100_Q0DM51-3 Isoform 3 of DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Oryza
sativa Japonica Group RepID=Q0DM51-3
Length = 757
Score = 141 bits (355), Expect = 3e-32
Identities = 78/128 (60%), Positives = 93/128 (72%), Gaps = 9/128 (7%)
Frame = +3
Query: 177 RRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDG----DNNNVEA-----DDG 329
RR A+A+PNSVLSE AFK L LSD +E + +G D VEA D
Sbjct: 42 RRAGGGRWAAAGAIASPNSVLSEHAFKRLQLSDEEEEEEEGAYGSDEEGVEAVGGGEGDE 101
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 509
+ELAI++L LP++L +LEKRGITHLFPIQRAVL+PAL GRD+IARAKTGTGKTLAFGIP
Sbjct: 102 DELAIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTLAFGIP 161
Query: 510 IIKRLTEE 533
+IK+L EE
Sbjct: 162 MIKQLMEE 169
[10][TOP]
>UniRef100_Q0DM51 DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Oryza sativa Japonica
Group RepID=RH3_ORYSJ
Length = 758
Score = 141 bits (355), Expect = 3e-32
Identities = 78/128 (60%), Positives = 93/128 (72%), Gaps = 9/128 (7%)
Frame = +3
Query: 177 RRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDG----DNNNVEA-----DDG 329
RR A+A+PNSVLSE AFK L LSD +E + +G D VEA D
Sbjct: 42 RRAGGGRWAAAGAIASPNSVLSEHAFKRLQLSDEEEEEEEGAYGSDEEGVEAVGGGEGDE 101
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 509
+ELAI++L LP++L +LEKRGITHLFPIQRAVL+PAL GRD+IARAKTGTGKTLAFGIP
Sbjct: 102 DELAIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTLAFGIP 161
Query: 510 IIKRLTEE 533
+IK+L EE
Sbjct: 162 MIKQLMEE 169
[11][TOP]
>UniRef100_Q6L724 ATP-dependent RNA helicase n=1 Tax=Hordeum vulgare
RepID=Q6L724_HORVU
Length = 764
Score = 137 bits (344), Expect = 6e-31
Identities = 72/114 (63%), Positives = 87/114 (76%), Gaps = 6/114 (5%)
Frame = +3
Query: 210 SAVATPNSVLSEEAFKSLGLS------DHDEYDLDGDNNNVEADDGEELAISKLSLPQRL 371
+A+A+PNSVLSE AFK LGL D D Y D + D +ELAIS+L LP +L
Sbjct: 43 AAIASPNSVLSEHAFKRLGLGAGSDDEDEDGYGSDQEGPAAVEGDKDELAISRLGLPAQL 102
Query: 372 EESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEE 533
+LEKRGITHLFPIQRAVL+PAL+GRD+IARAKTGTGKTLAFGIP+IK++ E+
Sbjct: 103 VATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFGIPMIKQIIEQ 156
[12][TOP]
>UniRef100_B8LKW8 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LKW8_PICSI
Length = 802
Score = 135 bits (341), Expect = 1e-30
Identities = 92/210 (43%), Positives = 121/210 (57%), Gaps = 43/210 (20%)
Frame = +3
Query: 33 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLS-------LDKPFFTPLSLVRRTRR--- 182
MAS +GV S Q LE+S+ S LS S +D+ F L + + + +
Sbjct: 1 MASVMGVSSSLQALSLEVSRRVPMPVSGALSSSSSSFLNSVDRGHFLGLPVSKNSTKRTI 60
Query: 183 ------------------------IHSSSLLVPSAVATPNSVLSEEAFKSLGLSD----- 275
+ SS+L +AV++PNS++SEEAFK LGLS
Sbjct: 61 ESLLKRGCTEFHVYEFTKFSPSPGLKSSTLQSSAAVSSPNSIISEEAFKGLGLSSGSSLN 120
Query: 276 -HDEYDLDGDNNN---VEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPAL 443
D+YD + + N V+ +DG L +S L+L Q L E+L RGITHLFPIQRAVLVPAL
Sbjct: 121 LSDDYDYEDEIGNDVVVDNNDGN-LDLSGLNLSQELVEALANRGITHLFPIQRAVLVPAL 179
Query: 444 QGRDIIARAKTGTGKTLAFGIPIIKRLTEE 533
+GRD+I RAKTGTGKTLAFGIPII+RLT++
Sbjct: 180 EGRDLIGRAKTGTGKTLAFGIPIIERLTKD 209
[13][TOP]
>UniRef100_Q2HUZ8 Helicase, C-terminal; Zinc finger, CCHC-type; GUCT n=1 Tax=Medicago
truncatula RepID=Q2HUZ8_MEDTR
Length = 753
Score = 134 bits (336), Expect = 5e-30
Identities = 84/171 (49%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Frame = +3
Query: 39 STVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRI---HSSSLLVP 209
+++G + ++P LE+ K K + + S K F+ + R R+ +SS +P
Sbjct: 5 TSIGASTACKLPSLELYK---KHKLTSIPTSSVKFHFSDGNKSRHINRLANFNSSDRFLP 61
Query: 210 SAVATPNS----VLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEE 377
SAVATPNS +LS+EAFK LG S E + + + + + +EL ISKL LP +L +
Sbjct: 62 SAVATPNSSSSSLLSDEAFKGLGSSFDGESEDEDFPSRTTSINADELDISKLDLPSQLVD 121
Query: 378 SLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 530
SL RGIT LFPIQRAVLVPAL+GRDIIARAKTGTGKTLAFGIPII L +
Sbjct: 122 SLRDRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPIINGLDD 172
[14][TOP]
>UniRef100_B6SSK6 Nucleolar RNA helicase 2 n=1 Tax=Zea mays RepID=B6SSK6_MAIZE
Length = 744
Score = 134 bits (336), Expect = 5e-30
Identities = 73/113 (64%), Positives = 85/113 (75%), Gaps = 6/113 (5%)
Frame = +3
Query: 213 AVATPNSVLSEEAFKSLGLSDHDE-----YDLDGDNNNVEAD-DGEELAISKLSLPQRLE 374
A+A+PNSVLSE AFK L L DE Y D D + D EELAI++L LP L
Sbjct: 41 ALASPNSVLSEHAFKRLQLGSDDEDGEGPYGSDADEGFEAGEGDNEELAIARLGLPDELV 100
Query: 375 ESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEE 533
+LEKRGITHLFPIQRAVL+PAL+GRD+IARAKTGTGKTLAFGIP+IK+L E+
Sbjct: 101 ATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFGIPMIKQLIEQ 153
[15][TOP]
>UniRef100_B9F737 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9F737_ORYSJ
Length = 697
Score = 131 bits (330), Expect = 3e-29
Identities = 78/142 (54%), Positives = 93/142 (65%), Gaps = 23/142 (16%)
Frame = +3
Query: 177 RRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDG----DNNNVEA-----DDG 329
RR A+A+PNSVLSE AFK L LSD +E + +G D VEA D
Sbjct: 42 RRAGGGRWAAAGAIASPNSVLSEHAFKRLQLSDEEEEEEEGAYGSDEEGVEAVGGGEGDE 101
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQ--------------RAVLVPALQGRDIIAR 467
+ELAI++L LP++L +LEKRGITHLFPIQ RAVL+PAL GRD+IAR
Sbjct: 102 DELAIARLGLPEQLVSTLEKRGITHLFPIQVSVLGGDSEGIGVSRAVLIPALDGRDLIAR 161
Query: 468 AKTGTGKTLAFGIPIIKRLTEE 533
AKTGTGKTLAFGIP+IK+L EE
Sbjct: 162 AKTGTGKTLAFGIPMIKQLMEE 183
[16][TOP]
>UniRef100_B8AMQ6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AMQ6_ORYSI
Length = 779
Score = 126 bits (317), Expect = 9e-28
Identities = 79/149 (53%), Positives = 92/149 (61%), Gaps = 30/149 (20%)
Frame = +3
Query: 177 RRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDE-----YDLD------GDNNNVEA- 320
RR A+A+PNSVLSE AFK L LSD +E Y D D VEA
Sbjct: 42 RRAGGGRWAAAGAIASPNSVLSEHAFKRLQLSDEEEEEEGAYGSDEEGAYGSDEEGVEAV 101
Query: 321 ----DDGEELAISKLSLPQRLEESLEKRGITHLFPIQ--------------RAVLVPALQ 446
D +ELAI++L LP++L +LEKRGITHLFPIQ RAVL+PAL
Sbjct: 102 GGGEGDEDELAIARLGLPEQLVSTLEKRGITHLFPIQVSVLGGDSEGIGVSRAVLIPALD 161
Query: 447 GRDIIARAKTGTGKTLAFGIPIIKRLTEE 533
GRD+IARAKTGTGKTLAFGIP+IK+L EE
Sbjct: 162 GRDLIARAKTGTGKTLAFGIPMIKQLMEE 190
[17][TOP]
>UniRef100_A9RFR6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RFR6_PHYPA
Length = 793
Score = 112 bits (281), Expect = 1e-23
Identities = 64/118 (54%), Positives = 78/118 (66%), Gaps = 10/118 (8%)
Frame = +3
Query: 210 SAVATPNSVLSEEAFKSLGLS-----DHDEYDLDGDN-----NNVEADDGEELAISKLSL 359
+AVAT V + S G S + DE D+D D +N DDG+ELAIS+L +
Sbjct: 85 NAVATDFLVAQKGRAGSFGYSRGTDSEEDESDIDDDAEVIRVDNESMDDGDELAISRLGI 144
Query: 360 PQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEE 533
P + ++L KRGIT LFPIQRAVL PA+QGRD+I RAKTGTGKTLAFGIPII + E
Sbjct: 145 PDAVADALAKRGITQLFPIQRAVLEPAMQGRDLIGRAKTGTGKTLAFGIPIINNIIRE 202
[18][TOP]
>UniRef100_B9N3Z1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Z1_POPTR
Length = 377
Score = 105 bits (263), Expect = 2e-21
Identities = 65/129 (50%), Positives = 87/129 (67%), Gaps = 4/129 (3%)
Frame = +3
Query: 159 SLVRRTRRIHSS----SLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADD 326
SL+ +T+ I ++ S + SA++TPNS+L++ L D+ + D N+ +
Sbjct: 15 SLIDKTQFITTTATSISSFILSAISTPNSILAQNT----QLDDNFKDGTDALNHETTRPN 70
Query: 327 GEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGI 506
++L IS L LPQRL ++L +GIT LF IQRAVLVPAL+GRDIIAR K TGK LAFGI
Sbjct: 71 -DQLDISNLCLPQRLIQTLHTQGITILFTIQRAVLVPALEGRDIIARVKNRTGKALAFGI 129
Query: 507 PIIKRLTEE 533
PIIKRLTE+
Sbjct: 130 PIIKRLTEQ 138
[19][TOP]
>UniRef100_A9S7H7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9S7H7_PHYPA
Length = 689
Score = 99.8 bits (247), Expect = 1e-19
Identities = 57/108 (52%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
Frame = +3
Query: 210 SAVATPNSVLSEEAFKSLGLSDHDEYDLDGDN---NNVEADDGEELAISKLSLPQRLEES 380
SA+AT + S F D DE+D + + +N DD +ELA++ L +PQ + ++
Sbjct: 4 SAIATDYA--STSIFGLTDGLDTDEFDDEEEIIRVDNESVDDEDELAVANLGIPQAVVDA 61
Query: 381 LEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
L KRGI LFPIQRAVL PA+QGRD+I RAKTGTGKTLAFGIPII +
Sbjct: 62 LAKRGIEKLFPIQRAVLDPAMQGRDLIGRAKTGTGKTLAFGIPIIHNI 109
[20][TOP]
>UniRef100_A9T4H8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9T4H8_PHYPA
Length = 619
Score = 95.1 bits (235), Expect = 3e-18
Identities = 45/67 (67%), Positives = 58/67 (86%)
Frame = +3
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 509
+ELAI+ L + + + E+L KRGITHLFPIQRAVL PA++G+D+IARAKTGTGKTLAFGIP
Sbjct: 2 DELAINSLGVSEDIVEALAKRGITHLFPIQRAVLEPAMKGQDLIARAKTGTGKTLAFGIP 61
Query: 510 IIKRLTE 530
II+ + +
Sbjct: 62 IIRHIVD 68
[21][TOP]
>UniRef100_A9RFT8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9RFT8_PHYPA
Length = 638
Score = 94.7 bits (234), Expect = 4e-18
Identities = 51/88 (57%), Positives = 62/88 (70%)
Frame = +3
Query: 267 LSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQ 446
LS DE G N D ELAI L + + + +L KRGITHLFPIQRAVL PA++
Sbjct: 5 LSSSDEEGFVGKKNAGAGKD--ELAIDSLGVSEDIVNALAKRGITHLFPIQRAVLEPAMK 62
Query: 447 GRDIIARAKTGTGKTLAFGIPIIKRLTE 530
G+D+IARAKTGTGKTLAFGIPII+ + +
Sbjct: 63 GQDLIARAKTGTGKTLAFGIPIIQHIID 90
[22][TOP]
>UniRef100_B9S3L6 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus
communis RepID=B9S3L6_RICCO
Length = 323
Score = 90.1 bits (222), Expect = 9e-17
Identities = 43/76 (56%), Positives = 59/76 (77%)
Frame = +3
Query: 303 NNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGT 482
NN++ +D+ E L I KL + Q + +L +RGIT LFPIQ+AVL PA+QGRD+ RA+TGT
Sbjct: 87 NNDINSDE-EGLEIGKLGIAQEIVSALARRGITKLFPIQKAVLEPAMQGRDLFGRARTGT 145
Query: 483 GKTLAFGIPIIKRLTE 530
GKTLAFGIPI+ ++ +
Sbjct: 146 GKTLAFGIPILDKIIQ 161
[23][TOP]
>UniRef100_UPI00019844A0 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI00019844A0
Length = 666
Score = 89.7 bits (221), Expect = 1e-16
Identities = 49/100 (49%), Positives = 64/100 (64%)
Frame = +3
Query: 231 SVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLF 410
SV+S + SD ++ GD E L ISKL + Q + +L +GIT LF
Sbjct: 89 SVVSRAEYAVADFSDEEKSSKGGD---------EGLEISKLGIAQEIVSALANKGITKLF 139
Query: 411 PIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 530
PIQRAVL PA+QGRD+I RA+TGTGKTLAFGIPI+ ++ +
Sbjct: 140 PIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKVIQ 179
[24][TOP]
>UniRef100_A5AH66 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5AH66_VITVI
Length = 666
Score = 89.7 bits (221), Expect = 1e-16
Identities = 49/100 (49%), Positives = 64/100 (64%)
Frame = +3
Query: 231 SVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLF 410
SV+S + SD ++ GD E L ISKL + Q + +L +GIT LF
Sbjct: 89 SVVSRAEYAVADFSDEEKSSKGGD---------EGLEISKLGIAQEIVSALANKGITKLF 139
Query: 411 PIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 530
PIQRAVL PA+QGRD+I RA+TGTGKTLAFGIPI+ ++ +
Sbjct: 140 PIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKVIQ 179
[25][TOP]
>UniRef100_C5YRW1 Putative uncharacterized protein Sb08g021180 n=1 Tax=Sorghum
bicolor RepID=C5YRW1_SORBI
Length = 618
Score = 87.0 bits (214), Expect = 8e-16
Identities = 42/62 (67%), Positives = 51/62 (82%)
Frame = +3
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 509
E L I+KL + ++ E L K+GIT LFPIQRAVL PA+QGRD++ RAKTGTGKTLAFGIP
Sbjct: 96 EGLEIAKLGISNKIVERLAKKGITKLFPIQRAVLEPAMQGRDMVGRAKTGTGKTLAFGIP 155
Query: 510 II 515
I+
Sbjct: 156 IL 157
[26][TOP]
>UniRef100_B6SV06 Nucleolar RNA helicase 2 n=1 Tax=Zea mays RepID=B6SV06_MAIZE
Length = 613
Score = 86.7 bits (213), Expect = 1e-15
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = +3
Query: 294 DGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAK 473
+G+ V+ + L I++L R+ E L RGIT LFPIQRAVL PA+QG+D+I RA+
Sbjct: 81 EGEGEGVDTGAEKGLEIARLGTSPRIVEKLAARGITRLFPIQRAVLEPAMQGKDMIGRAR 140
Query: 474 TGTGKTLAFGIPIIKRL 524
TGTGKTLAFGIPI+ ++
Sbjct: 141 TGTGKTLAFGIPIMDKI 157
[27][TOP]
>UniRef100_C5X9H0 Putative uncharacterized protein Sb02g002790 n=1 Tax=Sorghum
bicolor RepID=C5X9H0_SORBI
Length = 602
Score = 85.9 bits (211), Expect = 2e-15
Identities = 43/76 (56%), Positives = 56/76 (73%)
Frame = +3
Query: 297 GDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKT 476
G+ V+ E L I++L + R+ E L RGIT LFPIQRAVL PA+QG+D+I RA+T
Sbjct: 73 GEGVGVDTGAEEGLEIARLWISPRIVEKLAARGITKLFPIQRAVLEPAMQGKDMIGRART 132
Query: 477 GTGKTLAFGIPIIKRL 524
GTGKTLAFGIPI+ ++
Sbjct: 133 GTGKTLAFGIPIMDKI 148
[28][TOP]
>UniRef100_B9IHF6 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9IHF6_POPTR
Length = 551
Score = 84.3 bits (207), Expect = 5e-15
Identities = 40/67 (59%), Positives = 53/67 (79%)
Frame = +3
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 509
E L IS+L + Q + +L K+GIT LFPIQRAVL PA+QG+D+ RA+TGTGKTLAFGIP
Sbjct: 40 EGLEISRLGISQEIVGALAKKGITKLFPIQRAVLEPAMQGKDMFGRARTGTGKTLAFGIP 99
Query: 510 IIKRLTE 530
I+ ++ +
Sbjct: 100 ILDKILQ 106
[29][TOP]
>UniRef100_Q9LUW6 DEAD-box ATP-dependent RNA helicase 9 n=1 Tax=Arabidopsis thaliana
RepID=RH9_ARATH
Length = 610
Score = 84.3 bits (207), Expect = 5e-15
Identities = 53/120 (44%), Positives = 76/120 (63%), Gaps = 2/120 (1%)
Frame = +3
Query: 171 RTRRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLD-GDNNNV-EADDGEELAI 344
+ R H S VPS + S++S F + + E D GD+ +V + G+ LAI
Sbjct: 63 KVRDFHVKS--VPSEFRS--SIVSSAGFAAQEYAPSYENDGGIGDSESVGSSGGGDGLAI 118
Query: 345 SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
+ L + + ++L+ RGI LFPIQ+AVL PA++GRD+I RA+TGTGKTLAFGIPII ++
Sbjct: 119 ADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKI 178
[30][TOP]
>UniRef100_B9HDF9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HDF9_POPTR
Length = 556
Score = 84.0 bits (206), Expect = 6e-15
Identities = 40/67 (59%), Positives = 52/67 (77%)
Frame = +3
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 509
E L IS L + + + SL K+GIT LFPIQ+AVL PA+QG+D+ RA+TGTGKTLAFGIP
Sbjct: 65 EGLEISNLGISKEIVNSLAKKGITKLFPIQKAVLEPAMQGKDMFGRARTGTGKTLAFGIP 124
Query: 510 IIKRLTE 530
I+ ++ E
Sbjct: 125 ILDKIIE 131
[31][TOP]
>UniRef100_Q0D8N0-2 Isoform 2 of DEAD-box ATP-dependent RNA helicase 53 n=1 Tax=Oryza
sativa Japonica Group RepID=Q0D8N0-2
Length = 585
Score = 84.0 bits (206), Expect = 6e-15
Identities = 63/150 (42%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Frame = +3
Query: 108 RSNCLSLSLDKPFFTPLSLVR--------RTRRIHSSSLLVPSAV---ATPNSVLSEEAF 254
R L +L P +PL R R R H S PS + +TP S S EA
Sbjct: 20 RGRSLLAALLSPSASPLDPCRGPAAPEPPRRRAFHGS----PSPLGFRSTPASWSSPEAG 75
Query: 255 KSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLV 434
++G DDG E+A +L + + E L RGIT LFPIQRAVL
Sbjct: 76 AAVG-----------------GDDGLEVA--RLGISPWIVERLAARGITRLFPIQRAVLD 116
Query: 435 PALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
PA+QG+D+I RA+TGTGKTLAFGIPI+ R+
Sbjct: 117 PAMQGKDMIGRARTGTGKTLAFGIPIMDRI 146
[32][TOP]
>UniRef100_Q0D8N0-3 Isoform 3 of DEAD-box ATP-dependent RNA helicase 53 n=1 Tax=Oryza
sativa Japonica Group RepID=Q0D8N0-3
Length = 330
Score = 84.0 bits (206), Expect = 6e-15
Identities = 63/150 (42%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Frame = +3
Query: 108 RSNCLSLSLDKPFFTPLSLVR--------RTRRIHSSSLLVPSAV---ATPNSVLSEEAF 254
R L +L P +PL R R R H S PS + +TP S S EA
Sbjct: 20 RGRSLLAALLSPSASPLDPCRGPAAPEPPRRRAFHGS----PSPLGFRSTPASWSSPEAG 75
Query: 255 KSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLV 434
++G DDG E+A +L + + E L RGIT LFPIQRAVL
Sbjct: 76 AAVG-----------------GDDGLEVA--RLGISPWIVERLAARGITRLFPIQRAVLD 116
Query: 435 PALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
PA+QG+D+I RA+TGTGKTLAFGIPI+ R+
Sbjct: 117 PAMQGKDMIGRARTGTGKTLAFGIPIMDRI 146
[33][TOP]
>UniRef100_Q0D8N0 DEAD-box ATP-dependent RNA helicase 53 n=3 Tax=Oryza sativa
RepID=RH53_ORYSJ
Length = 602
Score = 84.0 bits (206), Expect = 6e-15
Identities = 63/150 (42%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Frame = +3
Query: 108 RSNCLSLSLDKPFFTPLSLVR--------RTRRIHSSSLLVPSAV---ATPNSVLSEEAF 254
R L +L P +PL R R R H S PS + +TP S S EA
Sbjct: 20 RGRSLLAALLSPSASPLDPCRGPAAPEPPRRRAFHGS----PSPLGFRSTPASWSSPEAG 75
Query: 255 KSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLV 434
++G DDG E+A +L + + E L RGIT LFPIQRAVL
Sbjct: 76 AAVG-----------------GDDGLEVA--RLGISPWIVERLAARGITRLFPIQRAVLD 116
Query: 435 PALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
PA+QG+D+I RA+TGTGKTLAFGIPI+ R+
Sbjct: 117 PAMQGKDMIGRARTGTGKTLAFGIPIMDRI 146
[34][TOP]
>UniRef100_Q9LUW5 DEAD-box ATP-dependent RNA helicase 53 n=1 Tax=Arabidopsis thaliana
RepID=RH53_ARATH
Length = 616
Score = 84.0 bits (206), Expect = 6e-15
Identities = 42/76 (55%), Positives = 58/76 (76%)
Frame = +3
Query: 297 GDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKT 476
GD+ +V G+ LAIS+L + + ++L +GI LFPIQ+AVL PA++GRD+I RA+T
Sbjct: 94 GDSESV---GGDGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRART 150
Query: 477 GTGKTLAFGIPIIKRL 524
GTGKTLAFGIPII ++
Sbjct: 151 GTGKTLAFGIPIIDKI 166
[35][TOP]
>UniRef100_B9GE86 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9GE86_ORYSJ
Length = 676
Score = 82.8 bits (203), Expect = 1e-14
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +3
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 509
E L ++KL + ++ L RGIT LFPIQRAVL PA+QG+D++ RAKTGTGKTLAFGIP
Sbjct: 144 EGLEVAKLGISPKIVSQLASRGITKLFPIQRAVLEPAMQGKDMVGRAKTGTGKTLAFGIP 203
Query: 510 II 515
I+
Sbjct: 204 IL 205
[36][TOP]
>UniRef100_A2ZMM6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2ZMM6_ORYSI
Length = 630
Score = 82.8 bits (203), Expect = 1e-14
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +3
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 509
E L ++KL + ++ L RGIT LFPIQRAVL PA+QG+D++ RAKTGTGKTLAFGIP
Sbjct: 96 EGLEVAKLGISPKIVSQLASRGITKLFPIQRAVLEPAMQGKDMVGRAKTGTGKTLAFGIP 155
Query: 510 II 515
I+
Sbjct: 156 IL 157
[37][TOP]
>UniRef100_Q0ILZ4 DEAD-box ATP-dependent RNA helicase 9 n=1 Tax=Oryza sativa Japonica
Group RepID=RH9_ORYSJ
Length = 628
Score = 82.8 bits (203), Expect = 1e-14
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +3
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 509
E L ++KL + ++ L RGIT LFPIQRAVL PA+QG+D++ RAKTGTGKTLAFGIP
Sbjct: 96 EGLEVAKLGISPKIVSQLASRGITKLFPIQRAVLEPAMQGKDMVGRAKTGTGKTLAFGIP 155
Query: 510 II 515
I+
Sbjct: 156 IL 157
[38][TOP]
>UniRef100_C1MMH8 DEAD/DEAH box RNA helicase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MMH8_9CHLO
Length = 803
Score = 82.0 bits (201), Expect = 2e-14
Identities = 42/94 (44%), Positives = 57/94 (60%)
Frame = +3
Query: 243 EEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQR 422
+E F D ++YD D ++ A + + I + + +L KRGI LFPIQ
Sbjct: 113 DELFDDDDEDDEEDYDDDDEDEPAAAKNSDPNHIDNFPISVLTKAALRKRGIESLFPIQS 172
Query: 423 AVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
AVL PAL+GRDI+ RA+TGTGKTL F +PII+ L
Sbjct: 173 AVLAPALEGRDIVGRARTGTGKTLGFSLPIIESL 206
[39][TOP]
>UniRef100_C1E681 DEAD/DEAH box RNA helicase n=1 Tax=Micromonas sp. RCC299
RepID=C1E681_9CHLO
Length = 790
Score = 75.1 bits (183), Expect = 3e-12
Identities = 39/84 (46%), Positives = 54/84 (64%)
Frame = +3
Query: 273 DHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGR 452
D DE D + +++N + + + L + +L KRGI LFPIQ +VL PALQGR
Sbjct: 116 DDDEDDEEDEDDNKR----DPMHVDNFPLSDITKAALRKRGIETLFPIQASVLEPALQGR 171
Query: 453 DIIARAKTGTGKTLAFGIPIIKRL 524
D++ RA+TGTGKTL F +PII+ L
Sbjct: 172 DVVGRARTGTGKTLGFSLPIIESL 195
[40][TOP]
>UniRef100_C4RKM6 RNA helicase n=1 Tax=Micromonospora sp. ATCC 39149
RepID=C4RKM6_9ACTO
Length = 707
Score = 73.6 bits (179), Expect = 9e-12
Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Frame = +3
Query: 207 PSAVATPNSVLSEEAFKSLGLSDHD-EYDLDGDNNN-VEADDGEELAISKLSLPQRLEES 380
P+ T +S + A + + D + D D D VEAD + + L LPQ L ++
Sbjct: 61 PAGTTTDDSATIDAAVDTPADTQTDSKVDTDTDGEALVEAD----VDFAALGLPQPLVQA 116
Query: 381 LEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 536
L + GI FPIQRA + AL GRD++ R +TG+GKTLAFG+P+I RL + A
Sbjct: 117 LGRLGIATPFPIQRATVPDALAGRDVLGRGQTGSGKTLAFGLPVIARLAKRA 168
[41][TOP]
>UniRef100_C0U880 DNA/RNA helicase, superfamily II n=1 Tax=Geodermatophilus obscurus
DSM 43160 RepID=C0U880_9ACTO
Length = 508
Score = 73.2 bits (178), Expect = 1e-11
Identities = 35/64 (54%), Positives = 48/64 (75%)
Frame = +3
Query: 345 SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
++L LPQ+L +LE+RGI H F IQ + L AL GRD++ +A TG+GKTLAFG+P++ RL
Sbjct: 30 AQLGLPQQLVTALERRGIRHPFAIQASALPDALAGRDVLGKAATGSGKTLAFGLPMLARL 89
Query: 525 TEEA 536
E A
Sbjct: 90 GETA 93
[42][TOP]
>UniRef100_UPI0001B587FC putative ATP-dependent RNA helicase n=1 Tax=Streptomyces sp. C
RepID=UPI0001B587FC
Length = 694
Score = 72.8 bits (177), Expect = 1e-11
Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 1/120 (0%)
Frame = +3
Query: 174 TRRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEE-LAISK 350
T + + +L V A+ +++ +E ++L D D+ + + +ADD E + +
Sbjct: 7 TEIVDAETLAVTEAM---DAIERDEIIEALEADVADVADVTAEADAADADDAEPTITFAD 63
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 530
L LP+ + L + G+T FPIQ A + AL G+DI+ R +TG+GKTL+FG+P + RL +
Sbjct: 64 LGLPEGVVRKLGQNGVTSPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTLARLAD 123
[43][TOP]
>UniRef100_Q019E9 ATP-dependent RNA helicase (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q019E9_OSTTA
Length = 683
Score = 72.8 bits (177), Expect = 1e-11
Identities = 31/67 (46%), Positives = 48/67 (71%)
Frame = +3
Query: 324 DGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFG 503
D + + + + ++L KRG+ LFPIQ+AVL PA+ G+D++ RA+TGTGKTLAF
Sbjct: 21 DADPADVDNFGMSETTVQALRKRGVDALFPIQQAVLRPAMDGQDVVGRARTGTGKTLAFS 80
Query: 504 IPIIKRL 524
+P+I++L
Sbjct: 81 LPVIEKL 87
[44][TOP]
>UniRef100_UPI000194C8EA PREDICTED: hypothetical protein n=1 Tax=Taeniopygia guttata
RepID=UPI000194C8EA
Length = 708
Score = 72.0 bits (175), Expect = 3e-11
Identities = 51/155 (32%), Positives = 77/155 (49%)
Frame = +3
Query: 72 PHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPSAVATPNSVLSEEA 251
P + SK SK+ + SL+K + S R SSS S+ +
Sbjct: 63 PKAKKSKSVSKQNGHAKEESLEKSRLSSFSSKSSRRSRQSSS--------------SDTS 108
Query: 252 FKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVL 431
S SD D+ +L GD +E A S S+ + + L+ RG+T+LFP+Q
Sbjct: 109 SDSESESDQDQ-ELTGDQ--------KEGAFSNFSISKETVQLLQARGVTYLFPVQVKTF 159
Query: 432 VPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 536
P G+D+IA+A+TGTGKT +F IP+I++L E+
Sbjct: 160 NPVYTGKDVIAQARTGTGKTFSFAIPLIEKLQGES 194
[45][TOP]
>UniRef100_A4RXF6 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RXF6_OSTLU
Length = 346
Score = 71.6 bits (174), Expect = 3e-11
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = +3
Query: 378 SLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
+L KRG+ LFPIQ+AVL PAL G D++ RA+TGTGKTLAF +P+I+RL
Sbjct: 15 ALRKRGVDTLFPIQQAVLKPALSGEDVVGRARTGTGKTLAFALPVIERL 63
[46][TOP]
>UniRef100_UPI0001B4FB0E putative ATP-dependent RNA helicase n=1 Tax=Streptomyces
hygroscopicus ATCC 53653 RepID=UPI0001B4FB0E
Length = 745
Score = 70.9 bits (172), Expect = 6e-11
Identities = 30/77 (38%), Positives = 50/77 (64%)
Frame = +3
Query: 294 DGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAK 473
D + + E G E+ ++L LP+++ L + G+T FPIQ A + A+ G+DI+ R +
Sbjct: 58 DAEQSTPETSKGPEITFAELGLPEQIVRKLAQNGVTTPFPIQAATIPDAMAGKDILGRGR 117
Query: 474 TGTGKTLAFGIPIIKRL 524
TG+GKTL+FG+P++ L
Sbjct: 118 TGSGKTLSFGLPLLTSL 134
[47][TOP]
>UniRef100_Q5BKP5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 n=1 Tax=Mus musculus
RepID=Q5BKP5_MOUSE
Length = 734
Score = 70.1 bits (170), Expect = 1e-10
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 14/104 (13%)
Frame = +3
Query: 255 KSLGLSDHDEYDL------DGDNNNVEADDGEEL--------AISKLSLPQRLEESLEKR 392
K L D DEY+ +N++ +D EE A S S+ + + L+ R
Sbjct: 93 KDLPNGDVDEYEKRSKRVSSSENSHKSSDKAEETLTREQKEGAFSNFSISEETIKLLKGR 152
Query: 393 GITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
G+T+LFPIQ P +G+D+IA+A+TGTGKT +F IP+I+RL
Sbjct: 153 GVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERL 196
[48][TOP]
>UniRef100_B6KA36 Nucleolar RNA helicase, putative n=2 Tax=Toxoplasma gondii
RepID=B6KA36_TOXGO
Length = 840
Score = 70.1 bits (170), Expect = 1e-10
Identities = 36/99 (36%), Positives = 58/99 (58%)
Frame = +3
Query: 228 NSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHL 407
+ +L E S +D + D D ++ +D G +S +L + +SL+KRGIT L
Sbjct: 82 DDLLKAEPSSSKEENDEQDGDSDAESGRPASDSG---LLSDYNLSKTSLKSLQKRGITRL 138
Query: 408 FPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
P+Q+A GRD + RA+TGTGKT+AF +P+++R+
Sbjct: 139 LPVQQAAYRHVFAGRDFVGRARTGTGKTIAFALPLVERV 177
[49][TOP]
>UniRef100_Q99MJ9 ATP-dependent RNA helicase DDX50 n=2 Tax=Mus musculus
RepID=DDX50_MOUSE
Length = 734
Score = 70.1 bits (170), Expect = 1e-10
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 14/104 (13%)
Frame = +3
Query: 255 KSLGLSDHDEYDL------DGDNNNVEADDGEEL--------AISKLSLPQRLEESLEKR 392
K L D DEY+ +N++ +D EE A S S+ + + L+ R
Sbjct: 93 KDLPNGDVDEYEKRSKRVSSSENSHKSSDKAEETLTREQKEGAFSNFSISEETIKLLKGR 152
Query: 393 GITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
G+T+LFPIQ P +G+D+IA+A+TGTGKT +F IP+I+RL
Sbjct: 153 GVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERL 196
[50][TOP]
>UniRef100_UPI0001AEE82A ATP-dependent RNA helicase n=1 Tax=Streptomyces albus J1074
RepID=UPI0001AEE82A
Length = 789
Score = 69.7 bits (169), Expect = 1e-10
Identities = 41/113 (36%), Positives = 67/113 (59%), Gaps = 6/113 (5%)
Frame = +3
Query: 204 VPSAVA-TPNSVLSEEAFKSLGLSDH----DEYDLDGDNNNVEADDGEE-LAISKLSLPQ 365
+P+A A TP +V +E L +D D +LD + + EA+ ++ + + L LP+
Sbjct: 22 IPAAEAITPEAVTAEIPAAELPEADEAAQADVAELDAEAADDEAETEDDGVTFASLGLPE 81
Query: 366 RLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
+ L + G+T FPIQ A + AL G+DI+ R +TG+GKTL+FG+P++ L
Sbjct: 82 GVVRKLAQNGVTKPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPLLASL 134
[51][TOP]
>UniRef100_UPI00006D452E PREDICTED: similar to nucleolar protein GU2 n=1 Tax=Macaca mulatta
RepID=UPI00006D452E
Length = 737
Score = 69.7 bits (169), Expect = 1e-10
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Frame = +3
Query: 225 PNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEAD---DGEELAISKLSLPQRLEESLEKRG 395
PN + E KS +S D +N +E + +E A S + + + L+ RG
Sbjct: 97 PNGDIDEYEKKSKRVSSLDSSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRG 156
Query: 396 ITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
+T+LFPIQ P +G+D+IA+A+TGTGKT +F IP+I+RL
Sbjct: 157 VTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERL 199
[52][TOP]
>UniRef100_A1T7V0 DEAD/DEAH box helicase domain protein n=1 Tax=Mycobacterium
vanbaalenii PYR-1 RepID=A1T7V0_MYCVP
Length = 443
Score = 69.7 bits (169), Expect = 1e-10
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
L +P L +SL +RGIT FPIQ A L AL GRD++ R KTG+GKTLAF IP++ LT
Sbjct: 9 LGVPAPLVQSLSQRGITEPFPIQAATLPDALAGRDVLGRGKTGSGKTLAFSIPLVTALT 67
[53][TOP]
>UniRef100_A3TG38 ATP-dependent RNA helicase n=1 Tax=Janibacter sp. HTCC2649
RepID=A3TG38_9MICO
Length = 774
Score = 69.7 bits (169), Expect = 1e-10
Identities = 35/71 (49%), Positives = 47/71 (66%)
Frame = +3
Query: 318 ADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLA 497
A+ +E +KL + RL E L + GIT FPIQ A + AL GRD++ R +TG+GKTLA
Sbjct: 317 AEVTDENGFAKLGVDARLVERLARDGITSPFPIQEATIPDALAGRDVLGRGQTGSGKTLA 376
Query: 498 FGIPIIKRLTE 530
FG+P I RL +
Sbjct: 377 FGLPTITRLVD 387
[54][TOP]
>UniRef100_UPI000036E757 PREDICTED: nucleolar protein GU2 n=1 Tax=Pan troglodytes
RepID=UPI000036E757
Length = 737
Score = 69.3 bits (168), Expect = 2e-10
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Frame = +3
Query: 225 PNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEAD---DGEELAISKLSLPQRLEESLEKRG 395
PN + E KS +S D +N +E + +E A S + + + L+ RG
Sbjct: 97 PNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRG 156
Query: 396 ITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
+T+LFPIQ P +G+D+IA+A+TGTGKT +F IP+I+RL
Sbjct: 157 VTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERL 199
[55][TOP]
>UniRef100_B5HXZ0 ATP-dependent RNA helicase n=1 Tax=Streptomyces sviceus ATCC 29083
RepID=B5HXZ0_9ACTO
Length = 504
Score = 69.3 bits (168), Expect = 2e-10
Identities = 32/62 (51%), Positives = 45/62 (72%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
A + L LP+RL+ +L G+T FPIQ A L +L GRD++ R +TG+GKTLAFG+P++
Sbjct: 80 AFADLDLPERLQAALLAEGVTTPFPIQAATLPNSLAGRDVLGRGRTGSGKTLAFGLPLLA 139
Query: 519 RL 524
RL
Sbjct: 140 RL 141
[56][TOP]
>UniRef100_A8J6S5 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii
RepID=A8J6S5_CHLRE
Length = 384
Score = 69.3 bits (168), Expect = 2e-10
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +3
Query: 342 ISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKR 521
I+ L L ++L RGI LFP+Q VL P GRD++ RAKTG+GKTLAF +P+++
Sbjct: 16 IANLGLSPETMDALANRGIFSLFPVQAQVLEPIASGRDVVCRAKTGSGKTLAFALPVVEN 75
Query: 522 LTEEAG 539
L E +G
Sbjct: 76 LLEVSG 81
[57][TOP]
>UniRef100_Q5R409 Putative uncharacterized protein DKFZp459C132 (Fragment) n=1
Tax=Pongo abelii RepID=Q5R409_PONAB
Length = 413
Score = 69.3 bits (168), Expect = 2e-10
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Frame = +3
Query: 225 PNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEAD---DGEELAISKLSLPQRLEESLEKRG 395
PN + E KS +S D +N +E + +E A S + + + L+ RG
Sbjct: 97 PNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRG 156
Query: 396 ITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
+T+LFPIQ P +G+D+IA+A+TGTGKT +F IP+I+RL
Sbjct: 157 VTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERL 199
[58][TOP]
>UniRef100_Q53FI9 Nucleolar protein GU2 variant (Fragment) n=1 Tax=Homo sapiens
RepID=Q53FI9_HUMAN
Length = 363
Score = 69.3 bits (168), Expect = 2e-10
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Frame = +3
Query: 225 PNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEAD---DGEELAISKLSLPQRLEESLEKRG 395
PN + E KS +S D +N +E + +E A S + + + L+ RG
Sbjct: 97 PNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRG 156
Query: 396 ITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
+T+LFPIQ P +G+D+IA+A+TGTGKT +F IP+I+RL
Sbjct: 157 VTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERL 199
[59][TOP]
>UniRef100_B4DW97 cDNA FLJ61430, highly similar to ATP-dependent RNA helicase DDX50
(EC 3.6.1.-) n=1 Tax=Homo sapiens RepID=B4DW97_HUMAN
Length = 711
Score = 69.3 bits (168), Expect = 2e-10
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Frame = +3
Query: 225 PNSVLSEEAFKSLGLSDHDEYDLDGDNNNVE---ADDGEELAISKLSLPQRLEESLEKRG 395
PN + E KS +S D +N +E + +E A S + + + L+ RG
Sbjct: 97 PNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEDTLTREQKEGAFSNFPISEETIKLLKGRG 156
Query: 396 ITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
+T+LFPIQ P +G+D+IA+A+TGTGKT +F IP+I+RL
Sbjct: 157 VTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERL 199
[60][TOP]
>UniRef100_Q9BQ39 ATP-dependent RNA helicase DDX50 n=2 Tax=Homo sapiens
RepID=DDX50_HUMAN
Length = 737
Score = 69.3 bits (168), Expect = 2e-10
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Frame = +3
Query: 225 PNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEAD---DGEELAISKLSLPQRLEESLEKRG 395
PN + E KS +S D +N +E + +E A S + + + L+ RG
Sbjct: 97 PNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRG 156
Query: 396 ITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
+T+LFPIQ P +G+D+IA+A+TGTGKT +F IP+I+RL
Sbjct: 157 VTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERL 199
[61][TOP]
>UniRef100_UPI000021DD77 PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
isoform 2 n=1 Tax=Rattus norvegicus RepID=UPI000021DD77
Length = 734
Score = 68.9 bits (167), Expect = 2e-10
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 14/104 (13%)
Frame = +3
Query: 255 KSLGLSDHDEYDL------DGDNNNVEADDGEEL--------AISKLSLPQRLEESLEKR 392
K L D DEY+ +N++ +D +E A S S+ + + L+ R
Sbjct: 93 KDLPNGDVDEYEKRSKRVSSSENSHKSSDKADETLTREQKEGAFSNFSISEETIKLLKGR 152
Query: 393 GITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
G+T+LFPIQ P +G+D+IA+A+TGTGKT +F IP+I+RL
Sbjct: 153 GVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERL 196
[62][TOP]
>UniRef100_C7QBM5 DEAD/DEAH box helicase domain protein n=1 Tax=Catenulispora
acidiphila DSM 44928 RepID=C7QBM5_CATAD
Length = 854
Score = 68.6 bits (166), Expect = 3e-10
Identities = 31/77 (40%), Positives = 52/77 (67%)
Frame = +3
Query: 294 DGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAK 473
D D ++ E+ +G+ +A ++L LP+ L + L + G+ + FPIQ A + AL GR ++ +A+
Sbjct: 51 DVDFDDTESAEGDPVAFTELGLPEELVKKLAENGVHNTFPIQAATIPDALAGRHVLGKAR 110
Query: 474 TGTGKTLAFGIPIIKRL 524
TG+GKTLAFG+ + L
Sbjct: 111 TGSGKTLAFGLAALANL 127
[63][TOP]
>UniRef100_B5GT30 ATP-dependent RNA helicase n=1 Tax=Streptomyces clavuligerus ATCC
27064 RepID=B5GT30_STRCL
Length = 501
Score = 68.6 bits (166), Expect = 3e-10
Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 9/121 (7%)
Frame = +3
Query: 195 SLLVPSAVATPNSV--LSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISK------ 350
S+ V +A P V ++ +++ ++D D + DG + + ++ A ++
Sbjct: 22 SVAVETAPEAPEVVETAAQAVVEAVAVADEDGIEEDGIEVEADVETADDSATAEPTITFA 81
Query: 351 -LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
L LP+ + L + G+T FPIQ A + AL G+DI+ R +TG+GKTL+FG+P + RL
Sbjct: 82 DLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTLARLA 141
Query: 528 E 530
+
Sbjct: 142 Q 142
[64][TOP]
>UniRef100_UPI000185D0B8 ATP-dependent RNA helicase n=1 Tax=Propionibacterium acnes SK137
RepID=UPI000185D0B8
Length = 700
Score = 68.2 bits (165), Expect = 4e-10
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Frame = +3
Query: 273 DHDEYDLDGDNNNVEADD----GEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPA 440
DHD+ ++D + + D E S L +P + +L K GIT F IQ A + A
Sbjct: 204 DHDDDNMDWEATELTDLDVTGIDHEGGFSALGVPDEIVAALAKTGITDPFRIQIAAIPDA 263
Query: 441 LQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
+ GRD++ RA TG+GKTLAFG+P++ RL+
Sbjct: 264 IAGRDVLGRASTGSGKTLAFGVPLLSRLS 292
[65][TOP]
>UniRef100_Q6A6U7 ATP-dependent RNA helicase n=1 Tax=Propionibacterium acnes
RepID=Q6A6U7_PROAC
Length = 700
Score = 68.2 bits (165), Expect = 4e-10
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Frame = +3
Query: 273 DHDEYDLDGDNNNVEADD----GEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPA 440
DHD+ ++D + + D E S L +P + +L K GIT F IQ A + A
Sbjct: 204 DHDDDNMDWEATELTDLDVTGIDHEGGFSALGVPDEIVAALAKTGITDPFRIQIAAIPDA 263
Query: 441 LQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
+ GRD++ RA TG+GKTLAFG+P++ RL+
Sbjct: 264 IAGRDVLGRASTGSGKTLAFGVPLLSRLS 292
[66][TOP]
>UniRef100_A8M6R3 DEAD/DEAH box helicase domain protein n=1 Tax=Salinispora arenicola
CNS-205 RepID=A8M6R3_SALAI
Length = 469
Score = 68.2 bits (165), Expect = 4e-10
Identities = 32/60 (53%), Positives = 44/60 (73%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 530
L LPQ L +L ++GIT F IQRA + AL GRD++ R +TG+GKTLAFG+P++ RL +
Sbjct: 22 LGLPQPLVRALARQGITAPFEIQRATMPDALAGRDVLGRGQTGSGKTLAFGLPLLARLAD 81
[67][TOP]
>UniRef100_UPI0000ECB487 ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box protein 50)
(Nucleolar protein Gu2) (Gu-beta). n=2 Tax=Gallus gallus
RepID=UPI0000ECB487
Length = 693
Score = 67.8 bits (164), Expect = 5e-10
Identities = 32/89 (35%), Positives = 53/89 (59%)
Frame = +3
Query: 270 SDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQG 449
S+ D D D ++ +E A S + + + L+ RG+T+LFP+Q P G
Sbjct: 91 SETSSGDGDSDQEQEMTEEQKEGAFSNFPISKGTIQLLQARGVTYLFPVQVKTFNPVYSG 150
Query: 450 RDIIARAKTGTGKTLAFGIPIIKRLTEEA 536
+D+IA+A+TGTGKT +F IP+I++L ++
Sbjct: 151 KDVIAQARTGTGKTFSFAIPLIEKLQADS 179
[68][TOP]
>UniRef100_C2CME6 Possible ATP-dependent RNA helicase n=1 Tax=Corynebacterium
striatum ATCC 6940 RepID=C2CME6_CORST
Length = 463
Score = 67.8 bits (164), Expect = 5e-10
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
L LPQ + L K+GIT FPIQ+A + AL G+D++ R TG+GKT FG+PI+ RLT
Sbjct: 7 LGLPQEIVRVLNKQGITEPFPIQQAAIPDALAGKDVLGRGPTGSGKTFTFGLPILTRLT 65
[69][TOP]
>UniRef100_C1YK49 DNA/RNA helicase, superfamily II n=1 Tax=Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111 RepID=C1YK49_NOCDA
Length = 539
Score = 67.8 bits (164), Expect = 5e-10
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
A L LPQ + E L + G+T FPIQ A + A++GRD++ +TG+GKTLAFG+P++
Sbjct: 10 AFDSLGLPQDIVEELARNGVTTPFPIQAATIPDAIEGRDVLGCGRTGSGKTLAFGLPVLM 69
Query: 519 RLTE 530
R E
Sbjct: 70 RAAE 73
[70][TOP]
>UniRef100_B9R9L5 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus
communis RepID=B9R9L5_RICCO
Length = 690
Score = 67.8 bits (164), Expect = 5e-10
Identities = 39/106 (36%), Positives = 60/106 (56%)
Frame = +3
Query: 210 SAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEK 389
S + P ++ +++ K ++D +E DG+ E D AISK + + L E L+
Sbjct: 68 SELVEPVNLKTKKKNKKAKIADENE---DGEVETAEEDHPN--AISKYRISESLREKLKS 122
Query: 390 RGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
+GI LFPIQ L G D++ RA+TG GKTLAF +PI++ +T
Sbjct: 123 KGIQSLFPIQAMTFDDILDGSDLVGRARTGQGKTLAFVLPILESIT 168
[71][TOP]
>UniRef100_A6W6A7 DEAD/DEAH box helicase domain protein n=1 Tax=Kineococcus
radiotolerans SRS30216 RepID=A6W6A7_KINRD
Length = 590
Score = 67.4 bits (163), Expect = 6e-10
Identities = 31/67 (46%), Positives = 46/67 (68%)
Frame = +3
Query: 333 ELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPI 512
E ++L LP+ L +LE+RG+T F IQ L + GRDI+ RA+TG+GKTL FG+P+
Sbjct: 145 ESTFAELGLPEELVAALERRGMTAPFAIQSRTLPDGIAGRDILGRARTGSGKTLGFGLPM 204
Query: 513 IKRLTEE 533
+ RL ++
Sbjct: 205 LARLAQQ 211
[72][TOP]
>UniRef100_A4XC61 DEAD/DEAH box helicase domain protein n=1 Tax=Salinispora tropica
CNB-440 RepID=A4XC61_SALTO
Length = 461
Score = 67.4 bits (163), Expect = 6e-10
Identities = 33/65 (50%), Positives = 45/65 (69%)
Frame = +3
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 509
E + + L LPQ L L ++GIT F IQRA + AL GRD++ R +TG+GKTLAFG+P
Sbjct: 7 ELVDFAALGLPQPLVRELARQGITTPFEIQRATMPDALAGRDVLGRGQTGSGKTLAFGLP 66
Query: 510 IIKRL 524
++ RL
Sbjct: 67 LLARL 71
[73][TOP]
>UniRef100_A1R8B9 Putative ATP-dependent RNA helicase n=1 Tax=Arthrobacter aurescens
TC1 RepID=A1R8B9_ARTAT
Length = 566
Score = 67.0 bits (162), Expect = 8e-10
Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Frame = +3
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 509
EE + + ++ + ESL GITH FPIQ L AL G DII +AKTGTGKTL FGIP
Sbjct: 35 EEKSFADFNVRADIVESLADAGITHPFPIQAMTLPVALSGHDIIGQAKTGTGKTLGFGIP 94
Query: 510 IIKRLT--EEAG 539
++R+ ++AG
Sbjct: 95 ALQRVAGRDDAG 106
[74][TOP]
>UniRef100_C9ZDS6 Putative ATP-dependent RNA helicase n=1 Tax=Streptomyces scabiei
87.22 RepID=C9ZDS6_STRSC
Length = 765
Score = 67.0 bits (162), Expect = 8e-10
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Frame = +3
Query: 258 SLGLSDH-------DEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPI 416
S+ +DH ++ D N A+ E+ + L LP+ + L + G+T FPI
Sbjct: 2 SISSTDHVVVPENGEDVDTLASVENGSAEKAPEVTFATLGLPEGVVRKLAQNGVTTPFPI 61
Query: 417 QRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
Q A + AL G+DI+ R +TG+GKTL+FG+P++ +L
Sbjct: 62 QAATIPDALAGKDILGRGRTGSGKTLSFGLPLLAQL 97
[75][TOP]
>UniRef100_A7BEI8 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus
ATCC 17982 RepID=A7BEI8_9ACTO
Length = 581
Score = 67.0 bits (162), Expect = 8e-10
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = +3
Query: 315 EADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTL 494
+ +D ++ + + + + ++LE +GITH FPIQ L PAL+ DII +AKTGTGKTL
Sbjct: 56 KGEDLDKKSFADFGVTDPIVDALEDQGITHPFPIQALTLGPALERHDIIGQAKTGTGKTL 115
Query: 495 AFGIPIIK 518
FGIP+++
Sbjct: 116 GFGIPVLE 123
[76][TOP]
>UniRef100_UPI00017F0088 PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50, partial n=1
Tax=Sus scrofa RepID=UPI00017F0088
Length = 507
Score = 66.6 bits (161), Expect = 1e-09
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Frame = +3
Query: 228 NSVLSEEAFKSLGLSDHDEYDLDGDNNNVEAD---DGEELAISKLSLPQRLEESLEKRGI 398
N + E KS +S D +N E + +E A S + + + L+ RG+
Sbjct: 98 NGDIEEYGKKSKRVSSLDSSTHKSSDNKPEESLTREQKEGAFSNFPISEETIKLLKGRGV 157
Query: 399 THLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
T+LFPIQ P +G+D+IA+A+TGTGKT +F IP+I+RL
Sbjct: 158 TYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERL 199
[77][TOP]
>UniRef100_Q6AFN8 ATP-dependent RNA helicase n=1 Tax=Leifsonia xyli subsp. xyli
RepID=Q6AFN8_LEIXX
Length = 491
Score = 66.6 bits (161), Expect = 1e-09
Identities = 32/63 (50%), Positives = 45/63 (71%)
Frame = +3
Query: 336 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
+ S+L++ Q + ++L +GIT FPIQ + AL G+DII +AKTGTGKT FG+PII
Sbjct: 1 MTFSELNIDQDMVDALAAKGITEPFPIQTQTIPLALTGQDIIGQAKTGTGKTFGFGLPII 60
Query: 516 KRL 524
+RL
Sbjct: 61 QRL 63
[78][TOP]
>UniRef100_C7MYC2 DNA/RNA helicase, superfamily II n=1 Tax=Saccharomonospora viridis
DSM 43017 RepID=C7MYC2_SACVD
Length = 449
Score = 66.6 bits (161), Expect = 1e-09
Identities = 32/74 (43%), Positives = 46/74 (62%)
Frame = +3
Query: 303 NNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGT 482
+ V + + L+LP+ L +L K G+ FPIQ A L AL GRD++ RA+TG+
Sbjct: 9 STTVSTTPATSITFADLNLPKALHRALRKAGLHTPFPIQAATLPDALAGRDVLGRAQTGS 68
Query: 483 GKTLAFGIPIIKRL 524
GKTLAFG+ ++ RL
Sbjct: 69 GKTLAFGLALLSRL 82
[79][TOP]
>UniRef100_B9HF37 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HF37_POPTR
Length = 597
Score = 66.6 bits (161), Expect = 1e-09
Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Frame = +3
Query: 270 SDH-DEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR--GITHLFPIQRAVLVPA 440
S+H E L+ + + VE +D E + +L L RL +L K+ I PIQRA +
Sbjct: 15 SEHKQEIQLNEEPDVVEEEDDEAQSFEELGLDPRLIRALNKKEISIAEPTPIQRAAIPLI 74
Query: 441 LQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 536
LQG+D++ARAKTG+GKTLA+ +P++++L A
Sbjct: 75 LQGKDVVARAKTGSGKTLAYLLPLLQKLLSTA 106
[80][TOP]
>UniRef100_A9P853 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9P853_POPTR
Length = 619
Score = 66.6 bits (161), Expect = 1e-09
Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Frame = +3
Query: 270 SDH-DEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR--GITHLFPIQRAVLVPA 440
S+H E L+ + + VE +D E + +L L RL +L K+ I PIQRA +
Sbjct: 15 SEHKQEIQLNEEPDVVEEEDDEAQSFEELGLDPRLIRALNKKEISIAEPTPIQRAAIPLI 74
Query: 441 LQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 536
LQG+D++ARAKTG+GKTLA+ +P++++L A
Sbjct: 75 LQGKDVVARAKTGSGKTLAYLLPLLQKLLSTA 106
[81][TOP]
>UniRef100_B8HBT2 DEAD/DEAH box helicase domain protein n=1 Tax=Arthrobacter
chlorophenolicus A6 RepID=B8HBT2_ARTCA
Length = 561
Score = 66.2 bits (160), Expect = 1e-09
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Frame = +3
Query: 333 ELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPI 512
E + + ++ Q + +SL GITH FPIQ L AL G DII +AKTGTGKTL FGIP
Sbjct: 36 EKSFADYNVRQDIVDSLSDAGITHPFPIQAMTLPVALSGHDIIGQAKTGTGKTLGFGIPA 95
Query: 513 IKRLT--EEAG 539
++R+ ++AG
Sbjct: 96 LQRVVGRDDAG 106
[82][TOP]
>UniRef100_B1VGY5 Putative ATP-dependent RNA helicase n=1 Tax=Corynebacterium
urealyticum DSM 7109 RepID=B1VGY5_CORU7
Length = 430
Score = 66.2 bits (160), Expect = 1e-09
Identities = 29/59 (49%), Positives = 45/59 (76%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
L LP L +SL++ G+ FPIQ +V+ A++G+D++A A TG+GKTLAFG+P++ RL+
Sbjct: 18 LGLPLALAQSLQRAGLREAFPIQASVIPSAVEGKDVLASAPTGSGKTLAFGLPMLARLS 76
[83][TOP]
>UniRef100_C2BPR4 Possible ATP-dependent RNA helicase n=1 Tax=Corynebacterium
pseudogenitalium ATCC 33035 RepID=C2BPR4_9CORY
Length = 432
Score = 66.2 bits (160), Expect = 1e-09
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
L LPQRL L GIT FPIQ+A + AL G+D++ R TG+GKT FG+PI+ RL
Sbjct: 7 LGLPQRLVHVLHNEGITEPFPIQKAAIPDALAGKDVLGRGPTGSGKTYTFGLPILARL 64
[84][TOP]
>UniRef100_B5I1H1 ATP-dependent RNA helicase n=1 Tax=Streptomyces sviceus ATCC 29083
RepID=B5I1H1_9ACTO
Length = 469
Score = 66.2 bits (160), Expect = 1e-09
Identities = 33/85 (38%), Positives = 51/85 (60%)
Frame = +3
Query: 267 LSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQ 446
L DH ++ D+ + D + + L+LP + +L + G+ FPIQ A L AL
Sbjct: 6 LPDHSDHS---DHPDRRGSDSPAASFADLALPAPVLRTLGEHGVREPFPIQAATLPDALA 62
Query: 447 GRDIIARAKTGTGKTLAFGIPIIKR 521
GRD++ R +TG+GKTLAFG+P++ R
Sbjct: 63 GRDVLGRGRTGSGKTLAFGLPLLVR 87
[85][TOP]
>UniRef100_B5HU23 ATP-dependent RNA helicase n=1 Tax=Streptomyces sviceus ATCC 29083
RepID=B5HU23_9ACTO
Length = 721
Score = 66.2 bits (160), Expect = 1e-09
Identities = 33/90 (36%), Positives = 52/90 (57%)
Frame = +3
Query: 258 SLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVP 437
S+ +DH + +V E+ + L LP+ + L + G+T FPIQ A +
Sbjct: 2 SISSTDHVVVPENEGTEDVTEATTPEVTFASLGLPEGVVRKLAQNGVTTPFPIQAATIPD 61
Query: 438 ALQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
AL G+DI+ R +TG+GKTL+FG+P + RL+
Sbjct: 62 ALAGKDILGRGRTGSGKTLSFGLPTLARLS 91
[86][TOP]
>UniRef100_A8JGT1 RNA helicase n=1 Tax=Chlamydomonas reinhardtii RepID=A8JGT1_CHLRE
Length = 737
Score = 66.2 bits (160), Expect = 1e-09
Identities = 28/67 (41%), Positives = 45/67 (67%)
Frame = +3
Query: 333 ELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPI 512
EL + + L ++++ L + I LFPIQ L PA++G D++ RA+TG GKTLAF +P+
Sbjct: 103 ELGLDRFKLSEQVKSMLRSQNIESLFPIQAMTLEPAMEGLDVVGRARTGCGKTLAFTVPV 162
Query: 513 IKRLTEE 533
++R+ E
Sbjct: 163 VERIIAE 169
[87][TOP]
>UniRef100_UPI0001B59F8F ATP-dependent RNA helicase n=1 Tax=Mycobacterium avium subsp. avium
ATCC 25291 RepID=UPI0001B59F8F
Length = 362
Score = 65.9 bits (159), Expect = 2e-09
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
L +P R+ ++L RGIT FPIQ L L GRD++ R KTG+GKTLAF IP++ RL+
Sbjct: 10 LGVPARIVDALTARGITSPFPIQAETLPDTLAGRDVLGRGKTGSGKTLAFSIPLVGRLS 68
[88][TOP]
>UniRef100_UPI0001AEE136 ATP-dependent RNA helicase n=1 Tax=Streptomyces albus J1074
RepID=UPI0001AEE136
Length = 117
Score = 65.9 bits (159), Expect = 2e-09
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
+ +L LP + E L RG+ FPIQ A L AL GRD++ RA+TG+GKTLAFG+P++
Sbjct: 35 SFDELGLPAGIRELLTARGVETPFPIQAATLPDALAGRDVLGRARTGSGKTLAFGLPLLV 94
Query: 519 R 521
R
Sbjct: 95 R 95
[89][TOP]
>UniRef100_UPI0000612B85 PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 isoform 1 n=1
Tax=Bos taurus RepID=UPI0000612B85
Length = 737
Score = 65.9 bits (159), Expect = 2e-09
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Frame = +3
Query: 228 NSVLSEEAFKSLGLSDHDEYDLDGDNNNVEAD---DGEELAISKLSLPQRLEESLEKRGI 398
N + E +S +S + +N VE + +E A S + + + L+ RG+
Sbjct: 98 NGDIDEHEKRSKRVSSLNSSTHKSSDNKVEETLTREQKEGAFSNFPISEETIKLLKGRGV 157
Query: 399 THLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
T+LFPIQ P +G+D+IA+A+TGTGKT +F IP+I+RL
Sbjct: 158 TYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERL 199
[90][TOP]
>UniRef100_Q73ZX0 Putative uncharacterized protein n=1 Tax=Mycobacterium avium subsp.
paratuberculosis RepID=Q73ZX0_MYCPA
Length = 497
Score = 65.9 bits (159), Expect = 2e-09
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
L +P R+ ++L RGIT FPIQ L L GRD++ R KTG+GKTLAF IP++ RL+
Sbjct: 53 LGVPARIVDALTARGITSPFPIQAETLPDTLAGRDVLGRGKTGSGKTLAFSIPLVGRLS 111
[91][TOP]
>UniRef100_C5C2A2 DEAD/DEAH box helicase domain protein n=1 Tax=Beutenbergia cavernae
DSM 12333 RepID=C5C2A2_BEUC1
Length = 636
Score = 65.9 bits (159), Expect = 2e-09
Identities = 32/62 (51%), Positives = 42/62 (67%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
+ S L +P L SL +RGIT FPIQ A L L GRD++ R +TG+GKTLAF +P++
Sbjct: 26 SFSDLGVPGPLARSLAERGITMPFPIQTATLPDTLAGRDVLGRGRTGSGKTLAFSLPMVA 85
Query: 519 RL 524
RL
Sbjct: 86 RL 87
[92][TOP]
>UniRef100_A0QGV4 ATP-dependent RNA helicase n=1 Tax=Mycobacterium avium 104
RepID=A0QGV4_MYCA1
Length = 455
Score = 65.9 bits (159), Expect = 2e-09
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
L +P R+ ++L RGIT FPIQ L L GRD++ R KTG+GKTLAF IP++ RL+
Sbjct: 10 LGVPARIVDALTARGITSPFPIQAETLPDTLAGRDVLGRGKTGSGKTLAFSIPLVGRLS 68
[93][TOP]
>UniRef100_A0JYP4 DEAD/DEAH box helicase domain protein n=1 Tax=Arthrobacter sp. FB24
RepID=A0JYP4_ARTS2
Length = 585
Score = 65.9 bits (159), Expect = 2e-09
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = +3
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 509
EE + + ++ + ESL GITH FPIQ L AL G DII +AKTGTGKTL FGIP
Sbjct: 35 EEKSFADYNVRADIVESLADAGITHPFPIQAMTLPVALAGHDIIGQAKTGTGKTLGFGIP 94
Query: 510 IIKRL 524
++R+
Sbjct: 95 ALQRV 99
[94][TOP]
>UniRef100_Q095H6 DbpA RNA binding domain family n=1 Tax=Stigmatella aurantiaca
DW4/3-1 RepID=Q095H6_STIAU
Length = 812
Score = 65.9 bits (159), Expect = 2e-09
Identities = 27/64 (42%), Positives = 45/64 (70%)
Frame = +3
Query: 333 ELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPI 512
+++ L L + L ++ +RG TH P+Q PA++GRD+I R+KTGTGKT AFG+P+
Sbjct: 28 DVSFEDLHLSEPLRRAIAERGYTHPTPVQAKAFQPAMEGRDLIVRSKTGTGKTAAFGLPL 87
Query: 513 IKRL 524
++++
Sbjct: 88 LEKI 91
[95][TOP]
>UniRef100_C7QE56 DEAD/DEAH box helicase domain protein n=1 Tax=Catenulispora
acidiphila DSM 44928 RepID=C7QE56_CATAD
Length = 795
Score = 65.9 bits (159), Expect = 2e-09
Identities = 31/59 (52%), Positives = 42/59 (71%)
Frame = +3
Query: 357 LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEE 533
+ +R+ E+L GI FPIQ A + AL G D+I +AKTGTGKTLAFGIP+++R+ E
Sbjct: 1 MDERIAEALSAGGIITPFPIQAATIPVALTGADVIGQAKTGTGKTLAFGIPVLQRMVRE 59
[96][TOP]
>UniRef100_C7NGI5 DNA/RNA helicase, superfamily II n=1 Tax=Kytococcus sedentarius DSM
20547 RepID=C7NGI5_KYTSD
Length = 741
Score = 65.9 bits (159), Expect = 2e-09
Identities = 32/60 (53%), Positives = 43/60 (71%)
Frame = +3
Query: 345 SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
++L +PQ L E L + GI+ FPIQ A L +L GRD++ R +TG+GKTLAFG+P I RL
Sbjct: 247 AELGVPQVLVERLARDGISTAFPIQAATLPDSLAGRDLLGRGRTGSGKTLAFGLPTIARL 306
[97][TOP]
>UniRef100_UPI0001795959 PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 n=1 Tax=Equus
caballus RepID=UPI0001795959
Length = 738
Score = 65.5 bits (158), Expect = 2e-09
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Frame = +3
Query: 228 NSVLSEEAFKSLGLSDHDEYDLDGDNNNVEAD---DGEELAISKLSLPQRLEESLEKRGI 398
N + E KS + D +N +E + +E A S + + + L+ RG+
Sbjct: 98 NGDIDEYEKKSKRVPSLDSSTQKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRGV 157
Query: 399 THLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
T+LFPIQ P +G+D+IA+A+TGTGKT +F IP+I+RL
Sbjct: 158 TYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERL 199
[98][TOP]
>UniRef100_UPI00005A06FA PREDICTED: similar to nucleolar protein GU2 isoform 5 n=1 Tax=Canis
lupus familiaris RepID=UPI00005A06FA
Length = 644
Score = 65.5 bits (158), Expect = 2e-09
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Frame = +3
Query: 228 NSVLSEEAFKSLGLSDHDEYDLDGDNNNVEAD---DGEELAISKLSLPQRLEESLEKRGI 398
N + E KS +S D +N +E + +E A S + + + L+ RG+
Sbjct: 99 NGDIDEYEKKSKRVSSLDSSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRGV 158
Query: 399 THLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
++LFPIQ P +G+D+IA+A+TGTGKT +F IP+I+RL
Sbjct: 159 SYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERL 200
[99][TOP]
>UniRef100_UPI00004BFC83 PREDICTED: similar to nucleolar protein GU2 isoform 2 n=2 Tax=Canis
lupus familiaris RepID=UPI00004BFC83
Length = 738
Score = 65.5 bits (158), Expect = 2e-09
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Frame = +3
Query: 228 NSVLSEEAFKSLGLSDHDEYDLDGDNNNVEAD---DGEELAISKLSLPQRLEESLEKRGI 398
N + E KS +S D +N +E + +E A S + + + L+ RG+
Sbjct: 99 NGDIDEYEKKSKRVSSLDSSTHKSSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRGV 158
Query: 399 THLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
++LFPIQ P +G+D+IA+A+TGTGKT +F IP+I+RL
Sbjct: 159 SYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERL 200
[100][TOP]
>UniRef100_C4DQE2 DNA/RNA helicase, superfamily II n=1 Tax=Stackebrandtia nassauensis
DSM 44728 RepID=C4DQE2_9ACTO
Length = 544
Score = 65.5 bits (158), Expect = 2e-09
Identities = 28/67 (41%), Positives = 45/67 (67%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
+ + L LP + +L +RG+T FPIQ A + AL G+D++ R +TG+GKTL+FG+P++
Sbjct: 19 SFADLGLPPAIVSALAERGVTSPFPIQAATIPDALSGKDVLGRGRTGSGKTLSFGLPLLV 78
Query: 519 RLTEEAG 539
L + G
Sbjct: 79 TLATDGG 85
[101][TOP]
>UniRef100_C0W6Y8 ATP-dependent RNA helicase n=1 Tax=Actinomyces urogenitalis DSM
15434 RepID=C0W6Y8_9ACTO
Length = 557
Score = 65.5 bits (158), Expect = 2e-09
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Frame = +3
Query: 210 SAVATPNSVLSEEAFKSLGLSDHDEYDL--DGDNNNVEADDGEELAISKLSLPQRLEESL 383
+A A P+S + E A + D D+ +GD ++ A + + + ++L
Sbjct: 21 AAPAQPSSGVIETAQAHAPVLDEATPDITDEGDETDLSAKTFADFGVEP-----EISQAL 75
Query: 384 EKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
+GI H FPIQ L AL GRD+I +AKTGTGKTL FGIP++
Sbjct: 76 ADKGIIHPFPIQALTLPVALDGRDVIGQAKTGTGKTLGFGIPLL 119
[102][TOP]
>UniRef100_C0VCH3 DNA/RNA helicase, superfamily II n=1 Tax=Xylanimonas
cellulosilytica DSM 15894 RepID=C0VCH3_9MICO
Length = 608
Score = 65.5 bits (158), Expect = 2e-09
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +3
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 509
++++ + + Q + ++L GITH FPIQ L ALQ DII +AKTGTGKTL FGIP
Sbjct: 69 QDVSFADFGVRQEIVDALTDVGITHPFPIQAMTLPVALQAHDIIGQAKTGTGKTLGFGIP 128
Query: 510 IIKRL 524
++ R+
Sbjct: 129 LLNRV 133
[103][TOP]
>UniRef100_Q57Z07 Nucleolar RNA helicase II, putative n=2 Tax=Trypanosoma brucei
RepID=Q57Z07_9TRYP
Length = 632
Score = 65.5 bits (158), Expect = 2e-09
Identities = 32/84 (38%), Positives = 53/84 (63%)
Frame = +3
Query: 288 DLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIAR 467
+ D + NN A G S+ +L + ++LE +GI LFP+Q ++G D++ +
Sbjct: 31 ETDQEPNNGSAAVGRPF--SEFNLSSGMVKALEAQGIVSLFPVQALTFEAIMRGEDVLVQ 88
Query: 468 AKTGTGKTLAFGIPIIKRLTEEAG 539
A+TG+GKTLAFGIPI+++L ++ G
Sbjct: 89 ARTGSGKTLAFGIPIVEKLNKKEG 112
[104][TOP]
>UniRef100_UPI0001B4BD21 ATP-dependent RNA helicase n=1 Tax=Streptomyces viridochromogenes
DSM 40736 RepID=UPI0001B4BD21
Length = 624
Score = 65.1 bits (157), Expect = 3e-09
Identities = 30/72 (41%), Positives = 45/72 (62%)
Frame = +3
Query: 309 NVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 488
N +D + + L LP+ + L + G+T FPIQ A + AL G+DI+ R +TG+GK
Sbjct: 14 NEAVEDTPSVTFADLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGK 73
Query: 489 TLAFGIPIIKRL 524
TL+FG+P + RL
Sbjct: 74 TLSFGLPTLARL 85
[105][TOP]
>UniRef100_UPI0000F2E9EA PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 n=1
Tax=Monodelphis domestica RepID=UPI0000F2E9EA
Length = 744
Score = 65.1 bits (157), Expect = 3e-09
Identities = 29/68 (42%), Positives = 47/68 (69%)
Frame = +3
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 509
+E A S+ + + + L+ RG+T+LFPIQ P +G+D+IA+A+TGTGKT +F IP
Sbjct: 140 KEGAFSRFPISEETIKLLKARGVTYLFPIQVKAFSPVYEGKDLIAQARTGTGKTFSFAIP 199
Query: 510 IIKRLTEE 533
+I++L +
Sbjct: 200 LIEKLQRD 207
[106][TOP]
>UniRef100_Q82FX9 Putative ATP-dependent RNA helicase n=1 Tax=Streptomyces
avermitilis RepID=Q82FX9_STRAW
Length = 747
Score = 65.1 bits (157), Expect = 3e-09
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = +3
Query: 321 DDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAF 500
+ EL L LP+ + L + G+T FPIQ A + AL G+DI+ R +TG+GKTL+F
Sbjct: 47 ESAPELTFGDLGLPEGVVRKLAQNGVTAPFPIQAATIPDALAGKDILGRGRTGSGKTLSF 106
Query: 501 GIPIIKRL 524
G+P + RL
Sbjct: 107 GLPTLARL 114
[107][TOP]
>UniRef100_B0RFN7 Putative ATP-dependent helicase n=1 Tax=Clavibacter michiganensis
subsp. sepedonicus RepID=B0RFN7_CLAMS
Length = 761
Score = 65.1 bits (157), Expect = 3e-09
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = +3
Query: 318 ADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLA 497
A D + + + L L Q + LE+ G + FPIQ A + L GRD++ R +TG+GKT+A
Sbjct: 370 AKDVDGVTFAALGLGQNIVRVLEELGASSPFPIQAATIPDVLAGRDVLGRGRTGSGKTIA 429
Query: 498 FGIPIIKRLTEEAG 539
FG P+++RL E G
Sbjct: 430 FGAPLVERLLENDG 443
[108][TOP]
>UniRef100_C6RBS8 ATP-dependent RNA helicase n=1 Tax=Corynebacterium
tuberculostearicum SK141 RepID=C6RBS8_9CORY
Length = 432
Score = 65.1 bits (157), Expect = 3e-09
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
L LPQRL L GIT FPIQ+A + AL G+D++ R TG+GKT FG+P++ RL
Sbjct: 7 LGLPQRLVHVLHNEGITEPFPIQKAAIPDALAGKDVLGRGPTGSGKTYTFGLPMLARL 64
[109][TOP]
>UniRef100_B9RWT5 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus
communis RepID=B9RWT5_RICCO
Length = 496
Score = 65.1 bits (157), Expect = 3e-09
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +3
Query: 282 EYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPAL-QGRDI 458
E D DG++ D+ E A ++L L L +S+ + G PIQ+A + PA QG+D+
Sbjct: 145 EDDTDGES----VDEAEFHAWNELRLHPLLMKSIYRLGFKEPTPIQKACIPPAAHQGKDV 200
Query: 459 IARAKTGTGKTLAFGIPIIKRLTEE 533
I A+TG+GKTLAFG+PI++RL EE
Sbjct: 201 IGAAETGSGKTLAFGLPILQRLLEE 225
[110][TOP]
>UniRef100_B8BZG6 RNA helicase (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BZG6_THAPS
Length = 466
Score = 65.1 bits (157), Expect = 3e-09
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = +3
Query: 381 LEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 536
L +GITH P+Q + P L GRD+I R++TGTGKTLAFG+P + R+ E A
Sbjct: 1 LSHKGITHFTPVQAKAMSPVLAGRDVIGRSRTGTGKTLAFGMPALTRMVERA 52
[111][TOP]
>UniRef100_Q6AX07 LOC398188 protein (Fragment) n=1 Tax=Xenopus laevis
RepID=Q6AX07_XENLA
Length = 397
Score = 64.7 bits (156), Expect = 4e-09
Identities = 30/87 (34%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Frame = +3
Query: 279 DEYDLDGDNNNVEAD--DGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGR 452
+E +L + ++ + DG+ SK + + ++L+ +G+T+LFPIQ G+
Sbjct: 169 EEKELTKEEEEIKKEKIDGD---FSKFPISKDTIKNLQAKGVTYLFPIQSKTFHTVYSGK 225
Query: 453 DIIARAKTGTGKTLAFGIPIIKRLTEE 533
D++ +A+TGTGKT +FGIP+++RL+E+
Sbjct: 226 DVVVQARTGTGKTFSFGIPLVERLSED 252
[112][TOP]
>UniRef100_Q32NW4 LOC398188 protein n=1 Tax=Xenopus laevis RepID=Q32NW4_XENLA
Length = 768
Score = 64.7 bits (156), Expect = 4e-09
Identities = 30/87 (34%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Frame = +3
Query: 279 DEYDLDGDNNNVEAD--DGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGR 452
+E +L + ++ + DG+ SK + + ++L+ +G+T+LFPIQ G+
Sbjct: 171 EEKELTKEEEEIKKEKIDGD---FSKFPISKDTIKNLQAKGVTYLFPIQSKTFHTVYSGK 227
Query: 453 DIIARAKTGTGKTLAFGIPIIKRLTEE 533
D++ +A+TGTGKT +FGIP+++RL+E+
Sbjct: 228 DVVVQARTGTGKTFSFGIPLVERLSED 254
[113][TOP]
>UniRef100_Q82F17 Putative ATP-dependent RNA helicase n=1 Tax=Streptomyces
avermitilis RepID=Q82F17_STRAW
Length = 510
Score = 64.7 bits (156), Expect = 4e-09
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
A + L +P+RL +L G+T FPIQ A L +L GRD++ R +TG+GKTLAFG+ ++
Sbjct: 78 AFAALDMPERLLTALGAEGVTEPFPIQAATLPNSLAGRDVLGRGRTGSGKTLAFGLALLA 137
Query: 519 RL 524
RL
Sbjct: 138 RL 139
[114][TOP]
>UniRef100_A5CP09 Putative ATP-dependent RNA helicase n=1 Tax=Clavibacter
michiganensis subsp. michiganensis NCPPB 382
RepID=A5CP09_CLAM3
Length = 403
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = +3
Query: 318 ADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLA 497
A D + + + L L Q + LE+ G FPIQ A + L GRD++ R +TG+GKT+A
Sbjct: 12 AKDVDGVTFAALGLGQNIVRVLEELGAASPFPIQAATIPDVLAGRDVLGRGRTGSGKTIA 71
Query: 498 FGIPIIKRLTEEAG 539
FG P+++RL E G
Sbjct: 72 FGAPLVERLLENDG 85
[115][TOP]
>UniRef100_A4TCN1 DEAD/DEAH box helicase domain protein n=1 Tax=Mycobacterium gilvum
PYR-GCK RepID=A4TCN1_MYCGI
Length = 468
Score = 64.7 bits (156), Expect = 4e-09
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
L +P L ++L +RGI FPIQ A L +L GRD++ R KTG+GKTLAF IP++ LT
Sbjct: 9 LGVPAPLVKALAERGIAEPFPIQAATLPDSLAGRDVLGRGKTGSGKTLAFSIPLVAALT 67
[116][TOP]
>UniRef100_B9SX92 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus
communis RepID=B9SX92_RICCO
Length = 616
Score = 64.7 bits (156), Expect = 4e-09
Identities = 34/91 (37%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Frame = +3
Query: 273 DHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGIT--HLFPIQRAVLVPALQ 446
D + +L+ E ++ EEL+ +L L RL +L K+ I+ PIQR + L+
Sbjct: 15 DEIKEELEEIKEEEEEEEEEELSFEELGLDPRLIRALNKKEISIRKPTPIQRVAIPLILE 74
Query: 447 GRDIIARAKTGTGKTLAFGIPIIKRLTEEAG 539
G+D++ARAKTG+GKTLA+ +P++++L ++G
Sbjct: 75 GKDVVARAKTGSGKTLAYLLPLLQKLFSDSG 105
[117][TOP]
>UniRef100_B3RVR9 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3RVR9_TRIAD
Length = 633
Score = 64.7 bits (156), Expect = 4e-09
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +3
Query: 294 DGDNNNVEADDG---EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIA 464
+GD+ E D G E+ K + + +SL++RGIT+LFPIQ G+D+I
Sbjct: 35 NGDSELPEHDSGSMEEKGDFKKFRISSAIADSLKERGITYLFPIQAQTFDYVYDGQDVIG 94
Query: 465 RAKTGTGKTLAFGIPIIKRLTEE 533
+A+TGTGKTL+F +PI ++L ++
Sbjct: 95 QARTGTGKTLSFALPITEKLIKK 117
[118][TOP]
>UniRef100_B2GKR3 Putative DEAD-box RNA helicase n=1 Tax=Kocuria rhizophila DC2201
RepID=B2GKR3_KOCRD
Length = 555
Score = 64.3 bits (155), Expect = 5e-09
Identities = 36/83 (43%), Positives = 47/83 (56%)
Frame = +3
Query: 273 DHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGR 452
D E D G + EE + + + Q + ++L GIT FPIQ L AL G+
Sbjct: 11 DAPELDESGAQAVEATEPVEESSFADFGVRQDIVDALAAHGITSPFPIQAMTLPIALSGQ 70
Query: 453 DIIARAKTGTGKTLAFGIPIIKR 521
DII +AKTGTGKTL FGIP ++R
Sbjct: 71 DIIGQAKTGTGKTLGFGIPALQR 93
[119][TOP]
>UniRef100_C9Z720 Putative RNA helicase n=1 Tax=Streptomyces scabiei 87.22
RepID=C9Z720_STRSC
Length = 446
Score = 64.3 bits (155), Expect = 5e-09
Identities = 31/61 (50%), Positives = 41/61 (67%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
A L LP RL E+L G+T FPIQ A L +L GRD++ R +TG+GKTLAFG+ ++
Sbjct: 22 AFDALGLPGRLLETLRAEGVTTPFPIQAATLPNSLAGRDVLGRGRTGSGKTLAFGLALLA 81
Query: 519 R 521
R
Sbjct: 82 R 82
[120][TOP]
>UniRef100_C5XA14 Putative uncharacterized protein Sb02g034740 n=1 Tax=Sorghum
bicolor RepID=C5XA14_SORBI
Length = 745
Score = 64.3 bits (155), Expect = 5e-09
Identities = 38/99 (38%), Positives = 53/99 (53%)
Frame = +3
Query: 237 LSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPI 416
LS+ A + +H EY G +L L Q+ ++ L K G T + I
Sbjct: 42 LSQSAGPAPAAGEHPEY-------------GACTLFDELPLSQKTKDGLRKAGFTEMSEI 88
Query: 417 QRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEE 533
QRA L AL GRD++ AKTG+GKTLAF IP++++L E
Sbjct: 89 QRAALPHALCGRDVLGAAKTGSGKTLAFVIPVLEKLYRE 127
[121][TOP]
>UniRef100_B9I4I4 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I4I4_POPTR
Length = 652
Score = 64.3 bits (155), Expect = 5e-09
Identities = 33/75 (44%), Positives = 48/75 (64%)
Frame = +3
Query: 300 DNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTG 479
D V+A+D A+++ + + L E+L+KRGI LFPIQ L G D++ RA+TG
Sbjct: 53 DEEEVKAEDPN--AVTRFRISEPLREALKKRGIEALFPIQARTFEDILNGCDLVGRARTG 110
Query: 480 TGKTLAFGIPIIKRL 524
GKTLAF +PI++ L
Sbjct: 111 QGKTLAFVLPILESL 125
[122][TOP]
>UniRef100_UPI0001B45E07 ATP-dependent RNA helicase n=1 Tax=Mycobacterium intracellulare
ATCC 13950 RepID=UPI0001B45E07
Length = 454
Score = 63.9 bits (154), Expect = 7e-09
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
L + + + +L RGITH FPIQ L L GRD++ R KTG+GKTLAF IP++ RL+
Sbjct: 10 LGVGKHIVSALAARGITHPFPIQVETLPDTLAGRDVLGRGKTGSGKTLAFSIPLVSRLS 68
[123][TOP]
>UniRef100_UPI0001AEC2FC ATP-dependent RNA helicase RhlE n=1 Tax=Alteromonas macleodii ATCC
27126 RepID=UPI0001AEC2FC
Length = 483
Score = 63.9 bits (154), Expect = 7e-09
Identities = 29/65 (44%), Positives = 46/65 (70%)
Frame = +3
Query: 336 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
++ ++L L + L +++EKRG + PIQ + LQG+D++A A+TGTGKT FG+PI+
Sbjct: 1 MSFTQLGLAEPLLKAIEKRGFSTPSPIQEKAIPEVLQGKDVLAAAQTGTGKTAGFGLPIL 60
Query: 516 KRLTE 530
+RL E
Sbjct: 61 QRLME 65
[124][TOP]
>UniRef100_A9WQU8 ATP-dependent RNA helicase n=1 Tax=Renibacterium salmoninarum ATCC
33209 RepID=A9WQU8_RENSM
Length = 631
Score = 63.9 bits (154), Expect = 7e-09
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 345 SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
S L +P+ L L+ +GI FPIQ L +L GRD++ R +TG+GKTLAFG+P++ RL
Sbjct: 77 SSLGVPKALVSVLDAQGIDAPFPIQAKTLPDSLGGRDVLGRGRTGSGKTLAFGLPLVARL 136
Query: 525 TE 530
E
Sbjct: 137 AE 138
[125][TOP]
>UniRef100_A4FM50 ATP-dependent RNA helicase n=1 Tax=Saccharopolyspora erythraea NRRL
2338 RepID=A4FM50_SACEN
Length = 496
Score = 63.9 bits (154), Expect = 7e-09
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
L LP+RL +L G+T FPIQ A + AL GRD++ R +TG+GKTLAFG+P++
Sbjct: 20 LGLPERLVRALGDLGMTEAFPIQAATIPDALGGRDVLGRGQTGSGKTLAFGLPLL 74
[126][TOP]
>UniRef100_C7NLV9 DNA/RNA helicase, superfamily II n=1 Tax=Kytococcus sedentarius DSM
20547 RepID=C7NLV9_KYTSD
Length = 573
Score = 63.9 bits (154), Expect = 7e-09
Identities = 30/61 (49%), Positives = 41/61 (67%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 530
L +P L LE+ GIT PIQ A L +L GRD++ R +TG+GKTLAFG+P++ RL
Sbjct: 8 LGVPTSLTSVLERSGITTPTPIQTATLPDSLAGRDVLGRGRTGSGKTLAFGVPLVARLAA 67
Query: 531 E 533
+
Sbjct: 68 D 68
[127][TOP]
>UniRef100_C2GIZ2 Superfamily II helicase n=1 Tax=Corynebacterium glucuronolyticum
ATCC 51866 RepID=C2GIZ2_9CORY
Length = 718
Score = 63.9 bits (154), Expect = 7e-09
Identities = 36/102 (35%), Positives = 54/102 (52%)
Frame = +3
Query: 219 ATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGI 398
A+ S +++A + D D + N E D +L+ KL LP + E+++K G
Sbjct: 75 ASTESETTDDASSTQSADDEDARAAE----NSEGTDSTDLSFDKLGLPSDILEAVKKVGF 130
Query: 399 THLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
PIQ + L GRD++ A+TGTGKT AF +PII R+
Sbjct: 131 ETPSPIQARTIPALLDGRDVVGLAQTGTGKTAAFALPIIARI 172
[128][TOP]
>UniRef100_C0W5Q9 ATP-dependent RNA helicase (Fragment) n=1 Tax=Actinomyces
urogenitalis DSM 15434 RepID=C0W5Q9_9ACTO
Length = 468
Score = 63.9 bits (154), Expect = 7e-09
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
+ + L + L L+ RG T FPIQ A L L+GRD++ R +TG+GKTLAF +P+++
Sbjct: 34 SFASLGVDPELVADLDSRGFTSPFPIQTATLPDTLRGRDVLGRGRTGSGKTLAFSLPLVQ 93
Query: 519 RLTEE 533
RL ++
Sbjct: 94 RLADD 98
[129][TOP]
>UniRef100_C0VTD2 Superfamily II helicase n=1 Tax=Corynebacterium glucuronolyticum
ATCC 51867 RepID=C0VTD2_9CORY
Length = 718
Score = 63.9 bits (154), Expect = 7e-09
Identities = 36/102 (35%), Positives = 54/102 (52%)
Frame = +3
Query: 219 ATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGI 398
A+ S +++A + D D + N E D +L+ KL LP + E+++K G
Sbjct: 75 ASTESETTDDASSTQSADDEDARAAE----NSEGTDSTDLSFDKLGLPSDILEAVKKVGF 130
Query: 399 THLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
PIQ + L GRD++ A+TGTGKT AF +PII R+
Sbjct: 131 ETPSPIQARTIPALLDGRDVVGLAQTGTGKTAAFALPIIARI 172
[130][TOP]
>UniRef100_B5H5Q2 ATP-dependent RNA helicase n=1 Tax=Streptomyces pristinaespiralis
ATCC 25486 RepID=B5H5Q2_STRPR
Length = 630
Score = 63.9 bits (154), Expect = 7e-09
Identities = 30/70 (42%), Positives = 44/70 (62%)
Frame = +3
Query: 315 EADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTL 494
EA + + S L LP+ + L + G+T FPIQ A + AL G+DI+ R +TG+GKTL
Sbjct: 58 EASEEPQTTFSDLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTL 117
Query: 495 AFGIPIIKRL 524
+FG+P + L
Sbjct: 118 SFGLPTLATL 127
[131][TOP]
>UniRef100_UPI0001B4CF8A ATP-dependent RNA helicase n=1 Tax=Streptomyces hygroscopicus ATCC
53653 RepID=UPI0001B4CF8A
Length = 506
Score = 63.5 bits (153), Expect = 9e-09
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
A ++L LP L L +GIT FPIQ A L AL GRD++ RA+TG+GKTLAFG+ ++
Sbjct: 24 AFAELDLPDGLAAELALQGITVPFPIQGATLPSALTGRDVLGRAQTGSGKTLAFGLALLA 83
Query: 519 R 521
R
Sbjct: 84 R 84
[132][TOP]
>UniRef100_UPI0001AF69EB putative ATP-dependent RNA helicase n=1 Tax=Mycobacterium kansasii
ATCC 12478 RepID=UPI0001AF69EB
Length = 504
Score = 63.5 bits (153), Expect = 9e-09
Identities = 28/67 (41%), Positives = 45/67 (67%)
Frame = +3
Query: 333 ELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPI 512
EL+ ++L + + +L ++GI H F IQ L AL G D+I +A+TG GKT AFG+P+
Sbjct: 9 ELSFAQLGVRDEIVRALREKGIEHPFAIQELTLPLALAGEDVIGQARTGMGKTFAFGVPL 68
Query: 513 IKRLTEE 533
++R+T +
Sbjct: 69 LQRITSD 75
[133][TOP]
>UniRef100_UPI00017F0455 PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1
Tax=Sus scrofa RepID=UPI00017F0455
Length = 784
Score = 63.5 bits (153), Expect = 9e-09
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Frame = +3
Query: 243 EEAFKSLGL-SDHDEYDLDGDNNNVEAD---DGEELAISKLSLPQRLEESLEKRGITHLF 410
+ F GL SD E + N+ +E + + +E A S + + + L+ RG+T LF
Sbjct: 152 KNGFSHSGLDSDSKEAATEESNSELEQEISVEQKEGAFSNFPISEETIKLLKARGVTFLF 211
Query: 411 PIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEE 533
PIQ G+D+IA+A+TGTGKT +F IP+I++L E
Sbjct: 212 PIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQGE 252
[134][TOP]
>UniRef100_UPI000179595A PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1
Tax=Equus caballus RepID=UPI000179595A
Length = 785
Score = 63.5 bits (153), Expect = 9e-09
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Frame = +3
Query: 270 SDHDEYDLDGDNNNVEAD---DGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPA 440
SD E + N+ +E + + +E A S + + + L+ RG+T LFPIQ
Sbjct: 163 SDSSEAASEESNSELEQEIPVEQKEGAFSNFPISEETIKLLKARGVTFLFPIQAKTFHHV 222
Query: 441 LQGRDIIARAKTGTGKTLAFGIPIIKRLTEE 533
G+D+IA+A+TGTGKT +F IP+I++L E
Sbjct: 223 YSGKDLIAQARTGTGKTFSFAIPLIEKLQRE 253
[135][TOP]
>UniRef100_UPI000050FD7D COG0513: Superfamily II DNA and RNA helicases n=1
Tax=Brevibacterium linens BL2 RepID=UPI000050FD7D
Length = 599
Score = 63.5 bits (153), Expect = 9e-09
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3
Query: 318 ADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLA 497
A D + L +P+ L ESL G + FPIQ+ L L GRD++ R KTG+GKTLA
Sbjct: 27 ATDTTPQTFTDLGVPEVLTESLRAEGKINAFPIQQDTLPDTLAGRDVLGRGKTGSGKTLA 86
Query: 498 FGIPIIKRL 524
F IP++ RL
Sbjct: 87 FSIPMVTRL 95
[136][TOP]
>UniRef100_UPI000050F870 COG0513: Superfamily II DNA and RNA helicases n=1
Tax=Brevibacterium linens BL2 RepID=UPI000050F870
Length = 489
Score = 63.5 bits (153), Expect = 9e-09
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +3
Query: 345 SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
++L + + +L +GITH FPIQ L AL G DII +AKTGTGKTL FGIP+++R+
Sbjct: 9 AELGVAGPIVAALAAKGITHPFPIQAMTLPVALSGADIIGQAKTGTGKTLGFGIPLLQRV 68
[137][TOP]
>UniRef100_Q9DF35 RNA helicase II/Gu n=1 Tax=Xenopus laevis RepID=Q9DF35_XENLA
Length = 759
Score = 63.5 bits (153), Expect = 9e-09
Identities = 29/75 (38%), Positives = 49/75 (65%)
Frame = +3
Query: 309 NVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 488
N E DG+ SK L + ++L+ +G+++LFPIQ A G+D++ +A+TGTGK
Sbjct: 173 NQEKIDGD---FSKFPLSKETIKNLQAKGVSYLFPIQSKTFHTAYSGKDVVVQARTGTGK 229
Query: 489 TLAFGIPIIKRLTEE 533
T +F IP++++L E+
Sbjct: 230 TFSFAIPLVEKLNED 244
[138][TOP]
>UniRef100_Q6GP16 LOC398189 protein n=1 Tax=Xenopus laevis RepID=Q6GP16_XENLA
Length = 727
Score = 63.5 bits (153), Expect = 9e-09
Identities = 29/75 (38%), Positives = 49/75 (65%)
Frame = +3
Query: 309 NVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 488
N E DG+ SK L + ++L+ +G+++LFPIQ A G+D++ +A+TGTGK
Sbjct: 141 NQEKIDGD---FSKFPLSKETIKNLQAKGVSYLFPIQSKTFHTAYSGKDVVVQARTGTGK 197
Query: 489 TLAFGIPIIKRLTEE 533
T +F IP++++L E+
Sbjct: 198 TFSFAIPLVEKLNED 212
[139][TOP]
>UniRef100_Q4FSS4 Possible ATP-dependent DEAD/DEAH box RNA-helicase n=1
Tax=Psychrobacter arcticus 273-4 RepID=Q4FSS4_PSYA2
Length = 567
Score = 63.5 bits (153), Expect = 9e-09
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Frame = +3
Query: 210 SAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNN----VEADDGEELAISKLSLPQRLEE 377
SA+A N ++ +D + D NN +A D ++ + L++ + +
Sbjct: 6 SAIAAENGIIES--------TDTPNTTANTDTNNEAATTDATDENKVTFTDLNIAKPILS 57
Query: 378 SLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
+LE+ G TH PIQ + ALQGRD++ A+TG+GKT AF IP++ RL+
Sbjct: 58 ALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFVIPVLDRLS 107
[140][TOP]
>UniRef100_C5CB97 DNA/RNA helicase, superfamily II n=1 Tax=Micrococcus luteus NCTC
2665 RepID=C5CB97_MICLC
Length = 611
Score = 63.5 bits (153), Expect = 9e-09
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = +3
Query: 375 ESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKR 521
E+LE +GI H FPIQ L AL G DII +AKTGTGKTL FGIP ++R
Sbjct: 50 EALEAKGIVHPFPIQAMTLPVALGGHDIIGQAKTGTGKTLGFGIPALQR 98
[141][TOP]
>UniRef100_A9WPJ4 ATP-dependent RNA helicase n=1 Tax=Renibacterium salmoninarum ATCC
33209 RepID=A9WPJ4_RENSM
Length = 565
Score = 63.5 bits (153), Expect = 9e-09
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = +3
Query: 375 ESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
E+L GI H FPIQ L AL G DII +AKTGTGKTL FG+P+++R+T
Sbjct: 49 EALADAGIVHPFPIQSMTLPVALGGHDIIGQAKTGTGKTLGFGVPVLQRVT 99
[142][TOP]
>UniRef100_C2I005 ATP-dependent RNA helicase n=1 Tax=Vibrio cholerae bv. albensis
VL426 RepID=C2I005_VIBCH
Length = 422
Score = 63.5 bits (153), Expect = 9e-09
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +3
Query: 336 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
+ S+L L RL +L + GI + PIQ+ + LQG+D++A A+TGTGKT AFG+P+I
Sbjct: 6 ITFSQLGLDSRLLNALSELGIVNPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLI 65
Query: 516 KRLTEE 533
+R E+
Sbjct: 66 QRFIEQ 71
[143][TOP]
>UniRef100_A6Y100 ATP-dependent RNA helicase, DEAD/DEAH box family n=1 Tax=Vibrio
cholerae RC385 RepID=A6Y100_VIBCH
Length = 422
Score = 63.5 bits (153), Expect = 9e-09
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +3
Query: 336 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
+ S+L L RL +L + GI + PIQ+ + LQG+D++A A+TGTGKT AFG+P+I
Sbjct: 6 ITFSQLGLDSRLLNTLSELGIVNPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLI 65
Query: 516 KRLTEE 533
+R E+
Sbjct: 66 QRFIEQ 71
[144][TOP]
>UniRef100_A6AGC2 ATP-dependent RNA helicase, DEAD/DEAH box family n=3 Tax=Vibrio
cholerae RepID=A6AGC2_VIBCH
Length = 422
Score = 63.5 bits (153), Expect = 9e-09
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +3
Query: 336 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
+ S+L L RL +L + GI + PIQ+ + LQG+D++A A+TGTGKT AFG+P+I
Sbjct: 6 ITFSQLGLDSRLLNTLSELGIVNPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLI 65
Query: 516 KRLTEE 533
+R E+
Sbjct: 66 QRFIEQ 71
[145][TOP]
>UniRef100_A3ELI0 ATP-dependent RNA helicase, DEAD/DEAH box family n=2 Tax=Vibrio
cholerae RepID=A3ELI0_VIBCH
Length = 422
Score = 63.5 bits (153), Expect = 9e-09
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +3
Query: 336 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
+ S+L L RL +L + GI + PIQ+ + LQG+D++A A+TGTGKT AFG+P+I
Sbjct: 6 ITFSQLGLDSRLLNTLSELGIVNPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLI 65
Query: 516 KRLTEE 533
+R E+
Sbjct: 66 QRFIEQ 71
[146][TOP]
>UniRef100_C3LW33 ATP-dependent RNA helicase, DEAD box family n=4 Tax=Vibrio cholerae
RepID=C3LW33_VIBCM
Length = 422
Score = 63.5 bits (153), Expect = 9e-09
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +3
Query: 336 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
+ S+L L RL +L + GI + PIQ+ + LQG+D++A A+TGTGKT AFG+P+I
Sbjct: 6 ITFSQLGLDSRLLNTLSELGIVNPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLI 65
Query: 516 KRLTEE 533
+R E+
Sbjct: 66 QRFIEQ 71
[147][TOP]
>UniRef100_C3NWL8 ATP-dependent RNA helicase n=10 Tax=Vibrio cholerae
RepID=C3NWL8_VIBCJ
Length = 422
Score = 63.5 bits (153), Expect = 9e-09
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +3
Query: 336 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
+ S+L L RL +L + GI + PIQ+ + LQG+D++A A+TGTGKT AFG+P+I
Sbjct: 6 ITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLI 65
Query: 516 KRLTEE 533
+R E+
Sbjct: 66 QRFIEQ 71
[148][TOP]
>UniRef100_Q234J0 DEAD/DEAH box helicase family protein n=1 Tax=Tetrahymena
thermophila SB210 RepID=Q234J0_TETTH
Length = 744
Score = 63.5 bits (153), Expect = 9e-09
Identities = 34/87 (39%), Positives = 50/87 (57%)
Frame = +3
Query: 273 DHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGR 452
D + D D N +EA ++ +SK + E L KRGIT+LFPIQ G+
Sbjct: 48 DSESEDEDTKKNQIEAKHNQD-NMSKYIKNAKTIEILNKRGITYLFPIQEHCFQAIQAGK 106
Query: 453 DIIARAKTGTGKTLAFGIPIIKRLTEE 533
D+I + +TG+GKTL F +P+I++L E
Sbjct: 107 DLIGKDRTGSGKTLGFSLPLIEKLRNE 133
[149][TOP]
>UniRef100_UPI0001B53A0C DEAD/DEAH box helicase domain protein n=1 Tax=Streptomyces sp. AA4
RepID=UPI0001B53A0C
Length = 575
Score = 63.2 bits (152), Expect = 1e-08
Identities = 31/60 (51%), Positives = 43/60 (71%)
Frame = +3
Query: 345 SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
++L LP+ L +L + GI FPIQ A + AL GRD++ RA+TG+GKTLAFG+ I+ RL
Sbjct: 46 AQLGLPEPLLRALAEAGIDAPFPIQSATIPDALAGRDVLGRAQTGSGKTLAFGLAILARL 105
[150][TOP]
>UniRef100_UPI0001B5063C ATP-dependent RNA helicase n=1 Tax=Streptomyces viridochromogenes
DSM 40736 RepID=UPI0001B5063C
Length = 482
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
A + L LP+RL +L G+T FPIQ A L +L GRD++ R +TG+GKTLAFG+ ++
Sbjct: 64 AFADLGLPERLLTALGAEGVTTPFPIQAATLPNSLAGRDVLGRGRTGSGKTLAFGLALLA 123
Query: 519 R 521
R
Sbjct: 124 R 124
[151][TOP]
>UniRef100_UPI0001AF256C putative ATP-dependent RNA helicase n=1 Tax=Streptomyces
roseosporus NRRL 11379 RepID=UPI0001AF256C
Length = 742
Score = 63.2 bits (152), Expect = 1e-08
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +3
Query: 201 LVPSAVA-TPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEE 377
LV SAV P + A K+ + E + + EA + L LP+ +
Sbjct: 13 LVESAVTEAPAGATAPAAEKTAEAPEPAEAPVAEASEESEASAEPTVTFGDLGLPEGIVR 72
Query: 378 SLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
L + G+T FPIQ A + AL G+DI+ R +TG+GKTL+FG+P + L
Sbjct: 73 KLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTLAAL 121
[152][TOP]
>UniRef100_UPI000194C8EB PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1
Tax=Taeniopygia guttata RepID=UPI000194C8EB
Length = 589
Score = 63.2 bits (152), Expect = 1e-08
Identities = 29/68 (42%), Positives = 44/68 (64%)
Frame = +3
Query: 321 DDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAF 500
++ +E A S L Q + L RGI +LFP+Q P G+D+IA+A+TGTGKT +F
Sbjct: 17 EEAKEGAFSNFPLSQNTVKLLTARGIKYLFPVQVKTFQPIYDGKDVIAQARTGTGKTFSF 76
Query: 501 GIPIIKRL 524
+P+I++L
Sbjct: 77 ALPLIEKL 84
[153][TOP]
>UniRef100_UPI0000F2E9E9 PREDICTED: similar to Gu protein n=1 Tax=Monodelphis domestica
RepID=UPI0000F2E9E9
Length = 902
Score = 63.2 bits (152), Expect = 1e-08
Identities = 33/95 (34%), Positives = 55/95 (57%)
Frame = +3
Query: 240 SEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQ 419
S++A S SD + + + + E +G A S + + + L+ RG+T+LFPIQ
Sbjct: 310 SKQASDSEESSDEESHSEEEQELSAEQKEG---AFSNFPISEETIQLLKARGVTYLFPIQ 366
Query: 420 RAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
G+D+IA+A+TGTGKT +F IP++++L
Sbjct: 367 AKTFHHVSSGKDLIAQARTGTGKTFSFAIPLVEKL 401
[154][TOP]
>UniRef100_UPI000069FD43 UPI000069FD43 related cluster n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI000069FD43
Length = 758
Score = 63.2 bits (152), Expect = 1e-08
Identities = 29/75 (38%), Positives = 49/75 (65%)
Frame = +3
Query: 309 NVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 488
N E DG+ SK + + ++L+ +G+++LFPIQ A G+D++ +A+TGTGK
Sbjct: 173 NQEKIDGD---FSKFPISKDTIKNLQAKGVSYLFPIQSKTFHTAYSGKDVVVQARTGTGK 229
Query: 489 TLAFGIPIIKRLTEE 533
T +F IP+++RL E+
Sbjct: 230 TFSFAIPLVERLNED 244
[155][TOP]
>UniRef100_Q28BT0 Novel GUCT (NUC152) domain containing DEAD/DEAH box helicase n=1
Tax=Xenopus (Silurana) tropicalis RepID=Q28BT0_XENTR
Length = 755
Score = 63.2 bits (152), Expect = 1e-08
Identities = 29/75 (38%), Positives = 49/75 (65%)
Frame = +3
Query: 309 NVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 488
N E DG+ SK + + ++L+ +G+++LFPIQ A G+D++ +A+TGTGK
Sbjct: 173 NQEKIDGD---FSKFPISKDTIKNLQAKGVSYLFPIQSKTFHTAYSGKDVVVQARTGTGK 229
Query: 489 TLAFGIPIIKRLTEE 533
T +F IP+++RL E+
Sbjct: 230 TFSFAIPLVERLNED 244
[156][TOP]
>UniRef100_A9UMQ9 LOC734085 protein n=1 Tax=Xenopus (Silurana) tropicalis
RepID=A9UMQ9_XENTR
Length = 758
Score = 63.2 bits (152), Expect = 1e-08
Identities = 29/75 (38%), Positives = 49/75 (65%)
Frame = +3
Query: 309 NVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 488
N E DG+ SK + + ++L+ +G+++LFPIQ A G+D++ +A+TGTGK
Sbjct: 173 NQEKIDGD---FSKFPISKDTIKNLQAKGVSYLFPIQSKTFHTAYSGKDVVVQARTGTGK 229
Query: 489 TLAFGIPIIKRLTEE 533
T +F IP+++RL E+
Sbjct: 230 TFSFAIPLVERLNED 244
[157][TOP]
>UniRef100_Q3IDJ4 Putative ATP-dependent RNA helicase; putative cold-shock protein;
could be specific for rRNA folding n=1
Tax=Pseudoalteromonas haloplanktis TAC125
RepID=Q3IDJ4_PSEHT
Length = 462
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
A S L+LP L ++L G TH+ P+Q L P L G+DIIA+AKTG+GKT AF + ++
Sbjct: 5 AFSSLALPSGLVDNLSTLGYTHMTPVQAQSLPPVLAGKDIIAQAKTGSGKTAAFSLGVLA 64
Query: 519 RL 524
+L
Sbjct: 65 KL 66
[158][TOP]
>UniRef100_Q8NQI4 Superfamily II DNA and RNA helicases n=2 Tax=Corynebacterium
glutamicum RepID=Q8NQI4_CORGL
Length = 448
Score = 63.2 bits (152), Expect = 1e-08
Identities = 28/59 (47%), Positives = 38/59 (64%)
Frame = +3
Query: 348 KLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
+L LP + L +GIT FPIQ A + AL G+D++ R TG+GKT FG+P+I RL
Sbjct: 6 ELKLPDEIVRELRSQGITEAFPIQEAAIPDALAGKDVLGRGPTGSGKTFTFGLPMITRL 64
[159][TOP]
>UniRef100_A0K1H7 DEAD/DEAH box helicase domain protein n=1 Tax=Arthrobacter sp. FB24
RepID=A0K1H7_ARTS2
Length = 635
Score = 63.2 bits (152), Expect = 1e-08
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 530
L P+ L ++L +GIT FPIQ L L GRD++ R +TG+GKT+AF IP++ RL E
Sbjct: 7 LGTPKELADTLTAQGITEPFPIQVKTLPDTLAGRDVLGRGRTGSGKTIAFAIPLVARLAE 66
[160][TOP]
>UniRef100_C8NNP4 ATP-dependent RNA helicase n=2 Tax=Corynebacterium efficiens
RepID=C8NNP4_COREF
Length = 460
Score = 63.2 bits (152), Expect = 1e-08
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = +3
Query: 345 SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
S+L+LP + + L K GIT FPIQ A + AL G D++ R TG+GKT FG+P++ RL
Sbjct: 5 SELNLPDPIVKELRKEGITDAFPIQAAAIPDALAGLDVLGRGPTGSGKTFTFGLPMLARL 64
[161][TOP]
>UniRef100_C8NGD8 Cold-shock DEAD box protein A n=1 Tax=Granulicatella adiacens ATCC
49175 RepID=C8NGD8_9LACT
Length = 520
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/70 (42%), Positives = 44/70 (62%)
Frame = +3
Query: 315 EADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTL 494
E E + ++L L L ES+EK G PIQ + ALQG D+I +A+TGTGKT
Sbjct: 5 EVSKEENMKFNELGLDSALLESIEKMGFEEATPIQAQTIPKALQGLDVIGQAQTGTGKTA 64
Query: 495 AFGIPIIKRL 524
AFG+P+++++
Sbjct: 65 AFGLPMLQKI 74
[162][TOP]
>UniRef100_C7MBM1 DNA/RNA helicase, superfamily II n=1 Tax=Brachybacterium faecium
DSM 4810 RepID=C7MBM1_BRAFD
Length = 582
Score = 63.2 bits (152), Expect = 1e-08
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = +3
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 509
EE + + + E+L +GIT FPIQ L AL+GRDII +AKTGTGKTL FGIP
Sbjct: 29 EERTFADFDVRTDIVEALAAKGITTPFPIQSLTLPVALRGRDIIGQAKTGTGKTLGFGIP 88
Query: 510 IIK 518
+++
Sbjct: 89 LLQ 91
[163][TOP]
>UniRef100_C2C8P3 ATP-dependent RNA helicase n=1 Tax=Vibrio cholerae 12129(1)
RepID=C2C8P3_VIBCH
Length = 422
Score = 63.2 bits (152), Expect = 1e-08
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +3
Query: 336 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
+ S+L L RL +L + GI + PIQ+ + LQG+D++A A+TGTGKT AFG+P+I
Sbjct: 6 ITFSQLGLDSRLLNTLSELGIVNPTPIQQQAVPHVLQGKDVLAGAQTGTGKTAAFGLPLI 65
Query: 516 KRLTEE 533
+R E+
Sbjct: 66 QRFIEQ 71
[164][TOP]
>UniRef100_C5WM07 Putative uncharacterized protein Sb01g009400 n=1 Tax=Sorghum
bicolor RepID=C5WM07_SORBI
Length = 634
Score = 63.2 bits (152), Expect = 1e-08
Identities = 28/70 (40%), Positives = 48/70 (68%)
Frame = +3
Query: 315 EADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTL 494
E + E++ +L L ++L+ +L K+GIT PIQR + L+G+D++A+AKTG+GKT
Sbjct: 30 EVKEEVEVSFDELGLDEQLKRALRKKGITKATPIQREAIPLILEGKDVVAKAKTGSGKTF 89
Query: 495 AFGIPIIKRL 524
A+ +P++ L
Sbjct: 90 AYLLPLLHEL 99
[165][TOP]
>UniRef100_Q4P3U9 ATP-dependent rRNA helicase RRP3 n=1 Tax=Ustilago maydis
RepID=RRP3_USTMA
Length = 551
Score = 63.2 bits (152), Expect = 1e-08
Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 14/108 (12%)
Frame = +3
Query: 243 EEAFKSLGLSDHDEYD---LDGDNNNVE-----------ADDGEELAISKLSLPQRLEES 380
E + G+SDHD+ D D D+ + ADDG+++ S L + ++ E+
Sbjct: 59 EHSASGSGISDHDDDDDPSADKDSPAADEEQDEKKVATIADDGKKVEFSDLGVIPQIVEA 118
Query: 381 LEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
G H PIQ + ALQ RD+I A+TG+GKT AF IPI++ L
Sbjct: 119 CTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQAL 166
[166][TOP]
>UniRef100_Q54S03 Probable ATP-dependent RNA helicase ddx18 n=1 Tax=Dictyostelium
discoideum RepID=DDX18_DICDI
Length = 602
Score = 63.2 bits (152), Expect = 1e-08
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 17/183 (9%)
Frame = +3
Query: 33 MASTVGVPSLYQVPHLEISKPN--------SKKRSNCLSLSLDKPFFTPLSLVRRTRRIH 188
M ST P+ P ++K SKK L+ ++I
Sbjct: 1 MVSTKVKPTTTTTPTTTVNKTTQPTTTTTASKKVKQTKQSKAQAKEIQELASTPSVKQIQ 60
Query: 189 SSSLLVPSAVATPNSVL--SEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISK---- 350
S +LVP T EE + + +E + + ++NN +EL ISK
Sbjct: 61 SQKVLVPKLEETKPITPPDQEEEDQEEEEQEQEEEENENNDNNTGNVSEKELGISKESIE 120
Query: 351 ---LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKR 521
L + + ++S+E+ G + PIQ ++P L+G+D++ A+TG+GKTLAF IP I+
Sbjct: 121 FSNLPIEENTKKSIEEMGFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEV 180
Query: 522 LTE 530
L +
Sbjct: 181 LVK 183
[167][TOP]
>UniRef100_UPI0001B55424 ATP-dependent RNA helicase n=1 Tax=Streptomyces sp. SPB78
RepID=UPI0001B55424
Length = 489
Score = 62.8 bits (151), Expect = 2e-08
Identities = 27/60 (45%), Positives = 42/60 (70%)
Frame = +3
Query: 345 SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
++L LP+ + L + G+T FPIQ A + AL G+DI+ R +TG+GKTL+FG+P++ L
Sbjct: 55 AELGLPENIVRKLTQNGVTSPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPLLASL 114
[168][TOP]
>UniRef100_UPI0001AF1052 ATP-dependent RNA helicase n=1 Tax=Streptomyces ghanaensis ATCC
14672 RepID=UPI0001AF1052
Length = 612
Score = 62.8 bits (151), Expect = 2e-08
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +3
Query: 333 ELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPI 512
EL + L LP+ + L + G+T FPIQ A + AL G+DI+ R +TG+GKTL+FG+P
Sbjct: 27 ELTFADLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPT 86
Query: 513 IKRL 524
+ L
Sbjct: 87 LATL 90
[169][TOP]
>UniRef100_UPI000180B7AC PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1
Tax=Ciona intestinalis RepID=UPI000180B7AC
Length = 672
Score = 62.8 bits (151), Expect = 2e-08
Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +3
Query: 264 GLSDHDEYDLDGDNNNVEADDGEELA-ISKLSLPQRLEESLEKRGITHLFPIQRAVLVPA 440
G S+ D DG N +++ E L + + ++ + L+K+G+ +LFPIQ
Sbjct: 65 GKSEPDVKAEDGTNVDIDDQSPEALGDFNNFRITEQTKVLLKKKGVAYLFPIQIQSFNHV 124
Query: 441 LQGRDIIARAKTGTGKTLAFGIPIIKRL 524
G+D++A+A+TGTGKTL+F IP++++L
Sbjct: 125 YDGKDVVAQARTGTGKTLSFAIPLVEKL 152
[170][TOP]
>UniRef100_Q9DF36 RNA helicase II/Gu n=1 Tax=Xenopus laevis RepID=Q9DF36_XENLA
Length = 800
Score = 62.8 bits (151), Expect = 2e-08
Identities = 29/87 (33%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Frame = +3
Query: 279 DEYDLDGDNNNVEAD--DGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGR 452
+E +L + ++ + DG+ SK + + ++ + +G+T+LFPIQ G+
Sbjct: 203 EEKELTKEEEEIKKEKIDGD---FSKFPISKDTIKNXQAKGVTYLFPIQSKTFHTVYSGK 259
Query: 453 DIIARAKTGTGKTLAFGIPIIKRLTEE 533
D++ +A+TGTGKT +FGIP+++RL+E+
Sbjct: 260 DVVVQARTGTGKTFSFGIPLVERLSED 286
[171][TOP]
>UniRef100_Q5YWS8 Putative RNA helicase n=1 Tax=Nocardia farcinica RepID=Q5YWS8_NOCFA
Length = 518
Score = 62.8 bits (151), Expect = 2e-08
Identities = 30/67 (44%), Positives = 44/67 (65%)
Frame = +3
Query: 336 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
+ ++L LP L ++L + GI FPIQ A + AL G+D++ R TG+GKTLAFG+P++
Sbjct: 30 VTFAELGLPAVLVQALRRNGIDAPFPIQAATVPDALAGKDVLGRGPTGSGKTLAFGLPML 89
Query: 516 KRLTEEA 536
RL A
Sbjct: 90 VRLAGNA 96
[172][TOP]
>UniRef100_Q2BNW2 ATP-dependent RNA helicase, DEAD box family protein n=1
Tax=Neptuniibacter caesariensis RepID=Q2BNW2_9GAMM
Length = 415
Score = 62.8 bits (151), Expect = 2e-08
Identities = 27/61 (44%), Positives = 45/61 (73%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 530
L L ++ +L++ G + + PIQR +VPA +GRDI+A A+TGTGKT AF +P++++L +
Sbjct: 6 LDLHPAIQSALDECGYSEMTPIQRQAIVPARRGRDILANAQTGTGKTAAFSLPVLQQLAD 65
Query: 531 E 533
+
Sbjct: 66 K 66
[173][TOP]
>UniRef100_C0VAQ5 DNA/RNA helicase, superfamily II n=1 Tax=Xylanimonas
cellulosilytica DSM 15894 RepID=C0VAQ5_9MICO
Length = 503
Score = 62.8 bits (151), Expect = 2e-08
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
L LP + SL +RGIT FPIQ A L +L G+D++ R +TG+GKT+AF +P++ RL
Sbjct: 6 LGLPMPVVASLAERGITSPFPIQAASLPDSLAGKDVLGRGRTGSGKTVAFALPVVTRL 63
[174][TOP]
>UniRef100_B5GG34 ATP-dependent RNA helicase n=1 Tax=Streptomyces sp. SPB74
RepID=B5GG34_9ACTO
Length = 748
Score = 62.8 bits (151), Expect = 2e-08
Identities = 29/70 (41%), Positives = 46/70 (65%)
Frame = +3
Query: 315 EADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTL 494
EA + ++L LP+ + L + G+T FPIQ A + AL G+DI+ R +TG+GKTL
Sbjct: 56 EAPAEKTPTFAELGLPEGIVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTL 115
Query: 495 AFGIPIIKRL 524
+FG+P++ +L
Sbjct: 116 SFGLPLLAQL 125
[175][TOP]
>UniRef100_C7YZE2 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YZE2_NECH7
Length = 590
Score = 62.8 bits (151), Expect = 2e-08
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 11/106 (10%)
Frame = +3
Query: 243 EEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAI-----------SKLSLPQRLEESLEK 389
E+ KS G D +E D D + N + DG +L + +L L + +++++
Sbjct: 74 EDGAKS-GDEDEEEED-DAEEGNTDLPDGGQLTLPPVAGAEAQSFEELKLSDKTMKAIKE 131
Query: 390 RGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
G T + IQR + P+L GRD++ AKTG+GKTLAF IP+++ L+
Sbjct: 132 MGFTKMTEIQRRGIPPSLAGRDVLGAAKTGSGKTLAFLIPVVEMLS 177
[176][TOP]
>UniRef100_UPI0001B59FC5 RhlE n=1 Tax=Mycobacterium avium subsp. avium ATCC 25291
RepID=UPI0001B59FC5
Length = 505
Score = 62.4 bits (150), Expect = 2e-08
Identities = 28/65 (43%), Positives = 44/65 (67%)
Frame = +3
Query: 333 ELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPI 512
EL ++L + + +L+++GI H F IQ L AL G D+I +A+TG GKT AFG+P+
Sbjct: 9 ELTFAQLGVRDEIVRALDEKGIQHSFAIQELTLPLALAGDDLIGQARTGMGKTFAFGVPL 68
Query: 513 IKRLT 527
++R+T
Sbjct: 69 LQRIT 73
[177][TOP]
>UniRef100_UPI0001AED2C8 ATP-dependent RNA helicase n=1 Tax=Streptomyces albus J1074
RepID=UPI0001AED2C8
Length = 503
Score = 62.4 bits (150), Expect = 2e-08
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
A +L LP L L +G+T FPIQ A L +L GRDI+ R +TG+GKTLAFG+ ++
Sbjct: 77 AFDQLGLPAPLLACLTAQGVTEPFPIQAATLPNSLAGRDILGRGRTGSGKTLAFGLALLA 136
Query: 519 RL 524
RL
Sbjct: 137 RL 138
[178][TOP]
>UniRef100_UPI0001555D90 PREDICTED: hypothetical protein n=1 Tax=Ornithorhynchus anatinus
RepID=UPI0001555D90
Length = 757
Score = 62.4 bits (150), Expect = 2e-08
Identities = 29/68 (42%), Positives = 45/68 (66%)
Frame = +3
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 509
+E A S S+ + + L+ RG+T+LFPIQ G+D+IA+A+TGTGKT +F IP
Sbjct: 170 KEGAFSNFSISKETIQLLKARGVTYLFPIQAKTFGHVSSGKDVIAQARTGTGKTFSFAIP 229
Query: 510 IIKRLTEE 533
+I++L +
Sbjct: 230 LIEKLQRD 237
[179][TOP]
>UniRef100_C3PGD8 Putative ATP-dependent RNA helicase n=1 Tax=Corynebacterium
aurimucosum ATCC 700975 RepID=C3PGD8_CORA7
Length = 430
Score = 62.4 bits (150), Expect = 2e-08
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
L LP+ + L+K+GIT FPIQ A + AL G+D++ R TG+GKT FG+P++ RL
Sbjct: 7 LGLPRDVVRVLDKQGITTPFPIQEAAIPDALSGKDVLGRGPTGSGKTFTFGLPMLSRL 64
[180][TOP]
>UniRef100_B1VR70 Putative ATP-dependent RNA helicase n=1 Tax=Streptomyces griseus
subsp. griseus NBRC 13350 RepID=B1VR70_STRGG
Length = 754
Score = 62.4 bits (150), Expect = 2e-08
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Frame = +3
Query: 315 EADDGEE------LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKT 476
EAD+ +E + L LP+ + L + G+T FPIQ A + AL G+DI+ R +T
Sbjct: 60 EADEADETPAEPTVTFGDLGLPEGIVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRT 119
Query: 477 GTGKTLAFGIPIIKRL 524
G+GKTL+FG+P + L
Sbjct: 120 GSGKTLSFGLPTLAAL 135
[181][TOP]
>UniRef100_A1UF01 DEAD/DEAH box helicase domain protein n=3 Tax=Mycobacterium
RepID=A1UF01_MYCSK
Length = 444
Score = 62.4 bits (150), Expect = 2e-08
Identities = 29/54 (53%), Positives = 37/54 (68%)
Frame = +3
Query: 369 LEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 530
L LE RGI FPIQ A L +L GRD++ R KTG+GKTLAF +P++ RL +
Sbjct: 16 LRRVLENRGIDSPFPIQAATLPDSLAGRDVLGRGKTGSGKTLAFSLPLVSRLAD 69
[182][TOP]
>UniRef100_C7PZF8 DEAD/DEAH box helicase domain protein n=1 Tax=Catenulispora
acidiphila DSM 44928 RepID=C7PZF8_CATAD
Length = 502
Score = 62.4 bits (150), Expect = 2e-08
Identities = 28/61 (45%), Positives = 43/61 (70%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
A S+L LP L ++L + G+T FPIQ + L +L GRD++ R +TG+GKT+AFG+ ++
Sbjct: 65 AFSELDLPGALLQTLAREGLTEPFPIQASTLPNSLAGRDVLGRGRTGSGKTIAFGLALLA 124
Query: 519 R 521
R
Sbjct: 125 R 125
[183][TOP]
>UniRef100_C0WLD2 Possible ATP-dependent RNA helicase n=1 Tax=Corynebacterium
accolens ATCC 49725 RepID=C0WLD2_9CORY
Length = 435
Score = 62.4 bits (150), Expect = 2e-08
Identities = 28/60 (46%), Positives = 39/60 (65%)
Frame = +3
Query: 345 SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
++L LPQR+ L +GIT FPIQ A + L G+D++ R TG+GKT FG+P + RL
Sbjct: 5 AELGLPQRVVHVLNDQGITEAFPIQAAAIPDVLAGKDVLGRGPTGSGKTFTFGLPTLARL 64
[184][TOP]
>UniRef100_A3W347 Putative ATP-dependent RNA helicase protein n=1 Tax=Roseovarius sp.
217 RepID=A3W347_9RHOB
Length = 438
Score = 62.4 bits (150), Expect = 2e-08
Identities = 31/64 (48%), Positives = 40/64 (62%)
Frame = +3
Query: 348 KLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
++ LP L L GIT PIQ + AL G D++ A+TGTGKT+AFG+P+I RL
Sbjct: 6 EMGLPAALVRKLANEGITEPTPIQTHAIPHALNGFDVLGLAQTGTGKTMAFGLPLITRLM 65
Query: 528 EEAG 539
EE G
Sbjct: 66 EEPG 69
[185][TOP]
>UniRef100_A0ACR8 Putative DEAD/DEAH box helicase n=1 Tax=Streptomyces ambofaciens
ATCC 23877 RepID=A0ACR8_STRAM
Length = 472
Score = 62.4 bits (150), Expect = 2e-08
Identities = 31/68 (45%), Positives = 43/68 (63%)
Frame = +3
Query: 318 ADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLA 497
AD + L LP L +++ G+T FPIQ A L AL GRD++ RA+TG+GKTLA
Sbjct: 34 ADAPPVASFDSLGLPPALLKAMTGLGVTRPFPIQAATLPDALAGRDVLGRARTGSGKTLA 93
Query: 498 FGIPIIKR 521
FG+ ++ R
Sbjct: 94 FGLALLAR 101
[186][TOP]
>UniRef100_B9ICY7 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9ICY7_POPTR
Length = 657
Score = 62.4 bits (150), Expect = 2e-08
Identities = 32/78 (41%), Positives = 49/78 (62%)
Frame = +3
Query: 291 LDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARA 470
++ + V+A+D A+++ + + L E L+KRGI LFPIQ L G D++ RA
Sbjct: 66 VEEEEEEVKAEDPN--AVTRFRISEPLREVLKKRGIEALFPIQARTFEDILNGGDLVGRA 123
Query: 471 KTGTGKTLAFGIPIIKRL 524
+TG GKTLAF +PI++ L
Sbjct: 124 RTGQGKTLAFVLPILESL 141
[187][TOP]
>UniRef100_A6MCY9 DEAD/DEAH box helicase family protein n=1 Tax=Oryza brachyantha
RepID=A6MCY9_9ORYZ
Length = 688
Score = 62.4 bits (150), Expect = 2e-08
Identities = 34/94 (36%), Positives = 50/94 (53%)
Frame = +3
Query: 243 EEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQR 422
+E ++G D E GD D + A++ + + L E L+ +GI LFPIQ
Sbjct: 80 KEEVAAVGEDDDGELTASGDE-----DPADPNALANFRISEPLREKLKSKGIKALFPIQA 134
Query: 423 AVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
L G D++ RA+TG GKTLAF +PI++ L
Sbjct: 135 TTFDLVLDGHDLVGRARTGQGKTLAFVLPILESL 168
[188][TOP]
>UniRef100_Q650T9 DEAD-box ATP-dependent RNA helicase 7 n=2 Tax=Oryza sativa Japonica
Group RepID=RH7_ORYSJ
Length = 696
Score = 62.4 bits (150), Expect = 2e-08
Identities = 38/112 (33%), Positives = 54/112 (48%)
Frame = +3
Query: 189 SSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQR 368
SS P+A E+ D DE +L + AD A++ + +
Sbjct: 69 SSDEPAPAAKKAKKEKTKEKVVVEEEEEDDDEGELTASGDEDPADPN---ALANFRISES 125
Query: 369 LEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
L E L+ +GI LFPIQ L G D++ RA+TG GKTLAF +PI++ L
Sbjct: 126 LREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLPILESL 177
[189][TOP]
>UniRef100_UPI0001B4BB5B helicase n=1 Tax=Streptomyces lividans TK24 RepID=UPI0001B4BB5B
Length = 513
Score = 62.0 bits (149), Expect = 3e-08
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = +3
Query: 375 ESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 536
E+LE GI FPIQ L AL G+D+I +AKTGTGKTL FG+P+++R+T A
Sbjct: 49 EALEAVGIITPFPIQEMTLPVALSGKDVIGQAKTGTGKTLGFGLPLLERVTVPA 102
[190][TOP]
>UniRef100_UPI0001AEEF5A ATP-dependent RNA helicase n=1 Tax=Streptomyces ghanaensis ATCC
14672 RepID=UPI0001AEEF5A
Length = 471
Score = 62.0 bits (149), Expect = 3e-08
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = +3
Query: 336 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
++ + L LP + +L G+ FPIQ A L AL+GRDI+ R +TG+GKTLAFG+P++
Sbjct: 28 VSFAGLELPVEVLRTLSGLGVREPFPIQAATLPDALEGRDILGRGRTGSGKTLAFGLPLL 87
Query: 516 KR 521
R
Sbjct: 88 TR 89
[191][TOP]
>UniRef100_Q73UQ4 RhlE n=1 Tax=Mycobacterium avium subsp. paratuberculosis
RepID=Q73UQ4_MYCPA
Length = 505
Score = 62.0 bits (149), Expect = 3e-08
Identities = 28/65 (43%), Positives = 44/65 (67%)
Frame = +3
Query: 333 ELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPI 512
EL ++L + + +L+++GI H F IQ L AL G D+I +A+TG GKT AFG+P+
Sbjct: 9 ELTFAQLGVRDEIVRALDEKGIQHPFAIQELTLPLALAGDDLIGQARTGMGKTFAFGVPL 68
Query: 513 IKRLT 527
++R+T
Sbjct: 69 LQRIT 73
[192][TOP]
>UniRef100_C4LK58 Putative ATP-dependent RNA helicase n=1 Tax=Corynebacterium
kroppenstedtii DSM 44385 RepID=C4LK58_CORK4
Length = 558
Score = 62.0 bits (149), Expect = 3e-08
Identities = 27/63 (42%), Positives = 44/63 (69%)
Frame = +3
Query: 348 KLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
+L + + ++L + GITH F IQ L AL G+D+I +A+TG GKTLA+G+P++ R+
Sbjct: 96 ELGVAAEIVDALAEHGITHTFAIQELTLPLALDGKDLIGQARTGMGKTLAYGVPLLDRIF 155
Query: 528 EEA 536
++A
Sbjct: 156 DDA 158
[193][TOP]
>UniRef100_C9N7I5 DEAD/DEAH box helicase domain protein n=1 Tax=Streptomyces
flavogriseus ATCC 33331 RepID=C9N7I5_9ACTO
Length = 726
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +3
Query: 300 DNNNVEADDGE-ELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKT 476
D A+D E + + L LP+ + L + G+T FPIQ A + AL G+DI+ R +T
Sbjct: 34 DTAEEAAEDAEPSVTFADLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRT 93
Query: 477 GTGKTLAFGIPIIKRL 524
G+GKTL+FG+P + L
Sbjct: 94 GSGKTLSFGLPTLAAL 109
[194][TOP]
>UniRef100_C9KAR1 DNA/RNA helicase, superfamily II n=1 Tax=Sanguibacter keddieii DSM
10542 RepID=C9KAR1_9MICO
Length = 456
Score = 62.0 bits (149), Expect = 3e-08
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
+ + SLP L + L ++GIT FPIQ A L L G+D++ R +TG+GKTLAF +P++
Sbjct: 3 SFTDFSLPAALCDELARQGITTPFPIQVATLPDTLAGKDVLGRGRTGSGKTLAFALPLVT 62
Query: 519 RL 524
RL
Sbjct: 63 RL 64
[195][TOP]
>UniRef100_C6WDM6 DEAD/DEAH box helicase domain protein n=1 Tax=Actinosynnema mirum
DSM 43827 RepID=C6WDM6_ACTMD
Length = 501
Score = 62.0 bits (149), Expect = 3e-08
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = +3
Query: 324 DGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFG 503
+G + S+L L L +L GIT FPIQ A L +L GRD++ R +TG+GKTLAFG
Sbjct: 50 EGPLPSFSELGLADELVRALATAGITEPFPIQAATLPDSLAGRDLLGRGQTGSGKTLAFG 109
Query: 504 IPIIKRL 524
+ ++ RL
Sbjct: 110 LALLSRL 116
[196][TOP]
>UniRef100_C2ARN5 DNA/RNA helicase, superfamily II n=1 Tax=Tsukamurella paurometabola
DSM 20162 RepID=C2ARN5_TSUPA
Length = 536
Score = 62.0 bits (149), Expect = 3e-08
Identities = 37/107 (34%), Positives = 56/107 (52%)
Frame = +3
Query: 216 VATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRG 395
+ T N+ + E + GL D +V DD + ++L + Q + ++L KRG
Sbjct: 6 ITTANTDIHTEPAAAEGLPDV----------HVIGDDHVSPSFAELGVDQGIVDALGKRG 55
Query: 396 ITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 536
I F IQ L AL G D+I +A+TG GKT FG+P++ RL +A
Sbjct: 56 IERTFAIQELTLPLALAGNDLIGQARTGMGKTYGFGVPLLDRLVTQA 102
[197][TOP]
>UniRef100_B5HXY0 ATP-dependent RNA helicase n=1 Tax=Streptomyces sviceus ATCC 29083
RepID=B5HXY0_9ACTO
Length = 508
Score = 62.0 bits (149), Expect = 3e-08
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = +3
Query: 375 ESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 536
E+LE GI + FPIQ L AL G D+I +AKTGTGKTL FG+P+++R+T A
Sbjct: 16 EALEAVGIINPFPIQEMTLPVALSGSDVIGQAKTGTGKTLGFGLPLLERVTVPA 69
[198][TOP]
>UniRef100_B5GQ57 Putative uncharacterized protein n=1 Tax=Streptomyces clavuligerus
ATCC 27064 RepID=B5GQ57_STRCL
Length = 891
Score = 62.0 bits (149), Expect = 3e-08
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = +3
Query: 375 ESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 536
E+LE GI + FPIQ L AL G D+I +AKTGTGKTL FG+P+++R+T A
Sbjct: 57 EALEAVGILNPFPIQEMTLPVALSGTDVIGQAKTGTGKTLGFGLPLLERVTVPA 110
[199][TOP]
>UniRef100_A4AFV6 ATP-dependent RNA helicase n=1 Tax=marine actinobacterium PHSC20C1
RepID=A4AFV6_9ACTN
Length = 757
Score = 62.0 bits (149), Expect = 3e-08
Identities = 30/77 (38%), Positives = 43/77 (55%)
Frame = +3
Query: 309 NVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 488
+V A D E + L + + L G FPIQ A + L G+D++ R KTG+GK
Sbjct: 363 SVTASDVEGKSFLDLGIGSNISRQLASMGAESPFPIQAATIPDVLAGKDVLGRGKTGSGK 422
Query: 489 TLAFGIPIIKRLTEEAG 539
T+AFG P+++RL E G
Sbjct: 423 TIAFGAPLVERLMENNG 439
[200][TOP]
>UniRef100_A0Y0D1 ATP-dependent RNA helicase, specific for 23S rRNA n=1
Tax=Alteromonadales bacterium TW-7 RepID=A0Y0D1_9GAMM
Length = 466
Score = 62.0 bits (149), Expect = 3e-08
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
A S L+LP L ++L G H+ P+Q L P L+G+DIIA+AKTG+GKT AF + ++
Sbjct: 9 AFSSLALPAGLVDNLSTLGYAHMTPVQAQSLPPVLEGKDIIAQAKTGSGKTAAFSLGVLA 68
Query: 519 RL 524
+L
Sbjct: 69 KL 70
[201][TOP]
>UniRef100_C5YMA3 Putative uncharacterized protein Sb07g022960 n=1 Tax=Sorghum
bicolor RepID=C5YMA3_SORBI
Length = 632
Score = 62.0 bits (149), Expect = 3e-08
Identities = 27/70 (38%), Positives = 48/70 (68%)
Frame = +3
Query: 315 EADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTL 494
E ++ E++ +L L ++L+ +L K+GI PIQR + L+G+D++A+AKTG+GKT
Sbjct: 33 EEEEEVEVSFDELGLDEQLKRALRKKGIAKATPIQREAIPLILEGKDVVAKAKTGSGKTF 92
Query: 495 AFGIPIIKRL 524
A+ +P++ L
Sbjct: 93 AYLLPLLHEL 102
[202][TOP]
>UniRef100_C1MQ70 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MQ70_9CHLO
Length = 748
Score = 62.0 bits (149), Expect = 3e-08
Identities = 37/107 (34%), Positives = 56/107 (52%)
Frame = +3
Query: 213 AVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKR 392
A ATP++ S+EA N + + + L +S ++ + + LE +
Sbjct: 104 APATPSASKSDEA------------------NEDASPEDDPLRVSNFNISREVCARLETK 145
Query: 393 GITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEE 533
GIT L+ IQ L G+DI+ARAKTG GKTLAF +PI++ + E
Sbjct: 146 GITSLYGIQAQTFQHVLDGKDIVARAKTGCGKTLAFVLPIVEAINRE 192
[203][TOP]
>UniRef100_B2ACU9 Predicted CDS Pa_3_11360 n=1 Tax=Podospora anserina
RepID=B2ACU9_PODAN
Length = 580
Score = 62.0 bits (149), Expect = 3e-08
Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Frame = +3
Query: 87 SKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRI----HSSSLLVPSAVATPNSVLSEEAF 254
S P SKKR L + + V++ +R S + A P SV EE
Sbjct: 3 SDPTSKKRK------LKSEKTSVIKKVKKAKRDPTPEESEDAEIEDAPVAPESVADEEV- 55
Query: 255 KSLGLSDHDEYDLDGDNNNVE-----AD--------DGEELAISKLSLPQRLEESLEKRG 395
++ D E + D N + + AD D ++L+L +R +++E+ G
Sbjct: 56 EAASTKDDSEDEDDDQNGSTDLAPPKADAPLIAPGLDTNATDFAQLNLSERTMKAIEEMG 115
Query: 396 ITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
T + IQR + P L G+D++ AKTG+GKTLAF IP I+ L
Sbjct: 116 FTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEML 158
[204][TOP]
>UniRef100_Q5ANB2 ATP-dependent RNA helicase DBP10 n=2 Tax=Candida albicans
RepID=DBP10_CANAL
Length = 908
Score = 62.0 bits (149), Expect = 3e-08
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Frame = +3
Query: 207 PSAVATPNSVLSEEAFKSLGLSDHDEYDLDGD-----------NNNVEADDGEELAISKL 353
PS S + +AF SL LSD++ + D D NNN A + + +
Sbjct: 45 PSPPPKKKSKPNPQAFPSLELSDNEGNNDDDDDDDSKINSYFINNNPTAKKAKAGSFASF 104
Query: 354 SLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
L + + ++ K+G PIQR + ++GRD++ A+TG+GKT AF +P+I+RL
Sbjct: 105 GLTKFILANIAKKGYKQPTPIQRKTIPLIMEGRDVVGMARTGSGKTAAFVLPLIERL 161
[205][TOP]
>UniRef100_UPI0001B5787F putative DEAD-box RNA helicase n=1 Tax=Streptomyces sp. SPB78
RepID=UPI0001B5787F
Length = 387
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
A L +P+ L ++L +G+T FPIQ A L +L GRDI+ R +TG+GKTLAFG+ ++
Sbjct: 62 AFEDLDMPEALLKTLAAQGVTTPFPIQAATLPNSLAGRDILGRGRTGSGKTLAFGLALLA 121
Query: 519 R 521
R
Sbjct: 122 R 122
[206][TOP]
>UniRef100_UPI0001B51435 DEAD-box RNA-helicase n=1 Tax=Streptomyces lividans TK24
RepID=UPI0001B51435
Length = 439
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
L LP L E++ G+T FPIQ A L AL GRD++ RA+TG+GKTLAFG+ ++
Sbjct: 12 LGLPPVLVETMTSLGVTRPFPIQAATLPEALAGRDVLGRARTGSGKTLAFGLALL 66
[207][TOP]
>UniRef100_UPI0001B4DFBD DEAD-box RNA helicase n=1 Tax=Streptomyces lividans TK24
RepID=UPI0001B4DFBD
Length = 528
Score = 61.6 bits (148), Expect = 3e-08
Identities = 28/59 (47%), Positives = 42/59 (71%)
Frame = +3
Query: 345 SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKR 521
++L LP R+ +L +G+T FPIQ A L +L GRD++ R +TG+GKTLAFG+ ++ R
Sbjct: 58 AELDLPARMLAALGDQGVTEPFPIQAATLPNSLAGRDVLGRGRTGSGKTLAFGLALLAR 116
[208][TOP]
>UniRef100_UPI0001976677 Superfamily II DNA and RNA helicase n=1 Tax=Bifidobacterium bifidum
NCIMB 41171 RepID=UPI0001976677
Length = 681
Score = 61.6 bits (148), Expect = 3e-08
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 5/101 (4%)
Frame = +3
Query: 249 AFKSLGLSDHDEYDLDGDNNNVEA--DDGEELA---ISKLSLPQRLEESLEKRGITHLFP 413
A +S+ +D D D+D + ++A DD E+ A ++L +P+ L L G FP
Sbjct: 13 AARSVMHTDTDTVDIDDIDAALDASADDKEQDAAPTFAELGVPKPLVHVLAMDGKVTAFP 72
Query: 414 IQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 536
IQ L +L G D++ R +TG+GKTLAF IP++ RL+E +
Sbjct: 73 IQADTLADSLNGVDLLGRGQTGSGKTLAFAIPLVARLSEHS 113
[209][TOP]
>UniRef100_Q9RK02 Putative DEAD-box RNA-helicase n=1 Tax=Streptomyces coelicolor
RepID=Q9RK02_STRCO
Length = 439
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
L LP L E++ G+T FPIQ A L AL GRD++ RA+TG+GKTLAFG+ ++
Sbjct: 12 LGLPPVLVETMTSLGVTRPFPIQAATLPEALAGRDVLGRARTGSGKTLAFGLALL 66
[210][TOP]
>UniRef100_Q9L0X2 Putative DEAD-box RNA helicase n=1 Tax=Streptomyces coelicolor
RepID=Q9L0X2_STRCO
Length = 528
Score = 61.6 bits (148), Expect = 3e-08
Identities = 28/59 (47%), Positives = 42/59 (71%)
Frame = +3
Query: 345 SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKR 521
++L LP R+ +L +G+T FPIQ A L +L GRD++ R +TG+GKTLAFG+ ++ R
Sbjct: 58 AELDLPARMLAALGDQGVTEPFPIQAATLPNSLAGRDVLGRGRTGSGKTLAFGLALLAR 116
[211][TOP]
>UniRef100_C1B4T7 ATP-dependent RNA helicase n=1 Tax=Rhodococcus opacus B4
RepID=C1B4T7_RHOOB
Length = 465
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/58 (50%), Positives = 40/58 (68%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
L LP + +L++ GI FPIQ A + L GRD++ RA TG+GKTLAFG+P++ RL
Sbjct: 19 LGLPAVMTHALDRGGIAAPFPIQAATIPDVLAGRDVLGRAPTGSGKTLAFGLPMLVRL 76
[212][TOP]
>UniRef100_B2HGB6 ATP-dependent RNA helicase, RhlE1 n=1 Tax=Mycobacterium marinum M
RepID=B2HGB6_MYCMM
Length = 524
Score = 61.6 bits (148), Expect = 3e-08
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
L + + L E L RGI+H FPIQ L L GRD++ R KTG+GKTLAF +P++ RL
Sbjct: 81 LGVGESLIEVLAARGISHPFPIQIETLPDTLGGRDVLGRGKTGSGKTLAFSLPMVSRL 138
[213][TOP]
>UniRef100_B2GGQ5 Putative DEAD-box RNA helicase n=1 Tax=Kocuria rhizophila DC2201
RepID=B2GGQ5_KOCRD
Length = 535
Score = 61.6 bits (148), Expect = 3e-08
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
L +P+ L L + GIT FPIQ L +L GRD++ R +TG+GKT+AF +P++ RL
Sbjct: 8 LGVPEALSADLARVGITEAFPIQEKTLPDSLAGRDVLGRGRTGSGKTVAFALPLVARL 65
[214][TOP]
>UniRef100_B1W0R5 Putative DEAD-box RNA helicase n=1 Tax=Streptomyces griseus subsp.
griseus NBRC 13350 RepID=B1W0R5_STRGG
Length = 537
Score = 61.6 bits (148), Expect = 3e-08
Identities = 30/67 (44%), Positives = 43/67 (64%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
A + L +P L ++L +G+T FPIQ A L +L GRDI+ R +TG+GKTLAFG+ ++
Sbjct: 77 AFADLDMPPGLLKTLAAQGVTEPFPIQGATLPNSLAGRDILGRGRTGSGKTLAFGLALLA 136
Query: 519 RLTEEAG 539
R G
Sbjct: 137 RTAGRRG 143
[215][TOP]
>UniRef100_B0RE39 Putative ATP-dependent RNA helicase n=1 Tax=Clavibacter
michiganensis subsp. sepedonicus RepID=B0RE39_CLAMS
Length = 520
Score = 61.6 bits (148), Expect = 3e-08
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Frame = +3
Query: 336 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
+ ++L++ + + ++L GI FPIQ + AL G+DII +AKTGTGKT FG+P+I
Sbjct: 1 MTFTELNIDEDMVQALADHGILEPFPIQEQTIPLALSGQDIIGQAKTGTGKTFGFGLPLI 60
Query: 516 KR--LTEEAG 539
+R LT E G
Sbjct: 61 QRLGLTPEPG 70
[216][TOP]
>UniRef100_A6W765 DEAD/DEAH box helicase domain protein n=1 Tax=Kineococcus
radiotolerans SRS30216 RepID=A6W765_KINRD
Length = 565
Score = 61.6 bits (148), Expect = 3e-08
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = +3
Query: 366 RLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKR 521
R+ +SL GIT FPIQ L AL G DII +AKTGTGKTL FG+P+++R
Sbjct: 38 RIAQSLAGAGITTPFPIQSMTLPVALSGHDIIGQAKTGTGKTLGFGVPLLQR 89
[217][TOP]
>UniRef100_A5CQ83 Putative ATP-dependent RNA helicase n=1 Tax=Clavibacter
michiganensis subsp. michiganensis NCPPB 382
RepID=A5CQ83_CLAM3
Length = 509
Score = 61.6 bits (148), Expect = 3e-08
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Frame = +3
Query: 336 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
+ ++L++ + + ++L GI FPIQ + AL G+DII +AKTGTGKT FG+P+I
Sbjct: 1 MTFTELNIDEDMVQALADHGILEPFPIQEQTIPLALSGQDIIGQAKTGTGKTFGFGLPLI 60
Query: 516 KR--LTEEAG 539
+R LT E G
Sbjct: 61 QRLGLTPEPG 70
[218][TOP]
>UniRef100_A0PL91 ATP-dependent RNA helicase, RhlE1 n=1 Tax=Mycobacterium ulcerans
Agy99 RepID=A0PL91_MYCUA
Length = 524
Score = 61.6 bits (148), Expect = 3e-08
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
L + + L E L RGI+H FPIQ L L GRD++ R KTG+GKTLAF +P++ RL
Sbjct: 81 LGVGESLIEVLAARGISHPFPIQIETLPDTLGGRDVLGRGKTGSGKTLAFSLPMVSRL 138
[219][TOP]
>UniRef100_C2CX54 ATP-dependent RNA helicase n=1 Tax=Gardnerella vaginalis ATCC 14019
RepID=C2CX54_GARVA
Length = 613
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/67 (43%), Positives = 44/67 (65%)
Frame = +3
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 509
+++ ++L +P+ L L G FPIQ+A L +LQG +I+ R +TG+GKTLAF IP
Sbjct: 162 DDVTFAQLGVPEPLVNVLRADGKNTAFPIQQATLPDSLQGANILGRGRTGSGKTLAFSIP 221
Query: 510 IIKRLTE 530
++ RL E
Sbjct: 222 LVARLAE 228
[220][TOP]
>UniRef100_C1WJ43 DNA/RNA helicase, superfamily II n=1 Tax=Kribbella flavida DSM
17836 RepID=C1WJ43_9ACTO
Length = 715
Score = 61.6 bits (148), Expect = 3e-08
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +3
Query: 345 SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
S L L RL + L + GIT FPIQ A + AL G+D++ R +TG+GKTL FG+P + RL
Sbjct: 271 SALGLAPRLVQRLARDGITAPFPIQTATIPDALAGKDVLGRGQTGSGKTLGFGLPTLMRL 330
[221][TOP]
>UniRef100_B7A6V9 DEAD/DEAH box helicase domain protein n=1 Tax=Thermus aquaticus
Y51MC23 RepID=B7A6V9_THEAQ
Length = 513
Score = 61.6 bits (148), Expect = 3e-08
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = +3
Query: 357 LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
L ++E+L RGIT PIQ A L AL+G+D+I +A+TGTGKTLAF +PI +RL
Sbjct: 8 LKDEIKEALYGRGITAPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAQRL 63
[222][TOP]
>UniRef100_B5GLV9 ATP-dependent RNA helicase n=1 Tax=Streptomyces clavuligerus ATCC
27064 RepID=B5GLV9_STRCL
Length = 472
Score = 61.6 bits (148), Expect = 3e-08
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
+ ++L LP L +L + G+ FPIQ A L AL GRDI+ RA+TG+GKTLAFG+ ++
Sbjct: 41 SFAELGLPVELMGTLTRLGVRDPFPIQAATLPSALAGRDILGRARTGSGKTLAFGLALLA 100
Query: 519 R 521
R
Sbjct: 101 R 101
[223][TOP]
>UniRef100_B4FYC7 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FYC7_MAIZE
Length = 634
Score = 61.6 bits (148), Expect = 3e-08
Identities = 27/70 (38%), Positives = 48/70 (68%)
Frame = +3
Query: 315 EADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTL 494
E ++ E++ +L L ++L+ +L K+GI PIQR + L+G+D++A+AKTG+GKT
Sbjct: 34 EEEEEVEVSFDELGLDEQLKRALRKKGILKATPIQREAIPLILEGKDVVAKAKTGSGKTF 93
Query: 495 AFGIPIIKRL 524
A+ +P++ L
Sbjct: 94 AYLLPLLHEL 103
[224][TOP]
>UniRef100_A2Z376 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2Z376_ORYSI
Length = 685
Score = 61.6 bits (148), Expect = 3e-08
Identities = 38/112 (33%), Positives = 54/112 (48%)
Frame = +3
Query: 189 SSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQR 368
SS P+A E+ D DE +L + AD A++ + +
Sbjct: 58 SSDEPAPAAKKAKKEKTKEKVVVEEEDDDDDEGELTASGDEDPADPN---ALANFRISEP 114
Query: 369 LEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
L E L+ +GI LFPIQ L G D++ RA+TG GKTLAF +PI++ L
Sbjct: 115 LREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLPILESL 166
[225][TOP]
>UniRef100_A7RH63 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RH63_NEMVE
Length = 507
Score = 61.6 bits (148), Expect = 3e-08
Identities = 26/71 (36%), Positives = 47/71 (66%)
Frame = +3
Query: 321 DDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAF 500
+D + L+ + L R+ +++ K + PIQ + AL+G+D++ARAKTG+GKT A+
Sbjct: 4 EDEQSLSFDSMGLDDRIVKAISKLNWSKPTPIQEKAITLALEGKDVLARAKTGSGKTAAY 63
Query: 501 GIPIIKRLTEE 533
IP+++R+ +E
Sbjct: 64 AIPVVQRILQE 74
[226][TOP]
>UniRef100_A8Q9K0 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS
7966 RepID=A8Q9K0_MALGO
Length = 801
Score = 61.6 bits (148), Expect = 3e-08
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = +3
Query: 279 DEYDLDGDNNNVEADD--GEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGR 452
DE D++ N E + E+ S + L R + L++ G + PIQ+A L +L+GR
Sbjct: 27 DERDIEDLNRACEILELKPEDETFSVIPLSSRTRQGLKRAGFIDMTPIQKASLPASLRGR 86
Query: 453 DIIARAKTGTGKTLAFGIPIIKRL 524
D++ A+TG+GKTLAF IP+++RL
Sbjct: 87 DVLGSARTGSGKTLAFLIPVLERL 110
[227][TOP]
>UniRef100_UPI0001B54911 DEAD-box RNA helicase n=1 Tax=Streptomyces sp. SPB78
RepID=UPI0001B54911
Length = 473
Score = 61.2 bits (147), Expect = 4e-08
Identities = 28/57 (49%), Positives = 41/57 (71%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKR 521
L +P+ LE +L +G+T FPIQ A L +L GRD++ R +TG+GKTLAFG+ ++ R
Sbjct: 53 LDMPKALEAALGAQGVTVPFPIQAATLPNSLAGRDVLGRGRTGSGKTLAFGLALLAR 109
[228][TOP]
>UniRef100_UPI0001AF215D putative DEAD-box RNA helicase n=1 Tax=Streptomyces roseosporus
NRRL 11379 RepID=UPI0001AF215D
Length = 539
Score = 61.2 bits (147), Expect = 4e-08
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
A + L +P L ++L +G+T FPIQ A L +L GRDI+ R +TG+GKTLAFG+ ++
Sbjct: 83 AFADLDMPAALLKTLAAQGVTEPFPIQGATLPNSLAGRDILGRGRTGSGKTLAFGLALLA 142
Query: 519 R 521
R
Sbjct: 143 R 143
[229][TOP]
>UniRef100_C8X9E8 DEAD/DEAH box helicase domain protein n=2 Tax=Nakamurella
multipartita DSM 44233 RepID=C8X9E8_9ACTO
Length = 392
Score = 61.2 bits (147), Expect = 4e-08
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = +3
Query: 327 GEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGI 506
G ++L +P L +L G FPIQ A L L GRD++ R KTG+GKT+AF I
Sbjct: 10 GPSTGFAELGVPTTLLPALTALGAPSPFPIQAATLPATLAGRDVLGRGKTGSGKTIAFAI 69
Query: 507 PIIKRLT 527
P++ RLT
Sbjct: 70 PLVARLT 76
[230][TOP]
>UniRef100_UPI0001555D8F PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 n=1
Tax=Ornithorhynchus anatinus RepID=UPI0001555D8F
Length = 790
Score = 61.2 bits (147), Expect = 4e-08
Identities = 29/77 (37%), Positives = 47/77 (61%)
Frame = +3
Query: 294 DGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAK 473
D + V + +E A S + ++ L+ RG+T+LFPIQ +GRD++A+A+
Sbjct: 168 DDEPEQVLTPEQKEGAFSNFPISEQTIRLLKDRGVTYLFPIQVKTFHHVYEGRDVVAQAR 227
Query: 474 TGTGKTLAFGIPIIKRL 524
TGTGKT +F IP+ ++L
Sbjct: 228 TGTGKTFSFAIPLTEKL 244
[231][TOP]
>UniRef100_UPI000021B00F conserved hypothetical protein n=1 Tax=Magnaporthe grisea 70-15
RepID=UPI000021B00F
Length = 578
Score = 61.2 bits (147), Expect = 4e-08
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +3
Query: 288 DLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIAR 467
D+ GD + E A S+L+L + +++E+ G T + IQR + P L G+D++
Sbjct: 96 DIPGDLTLPTTAESEAQAFSELNLSENTMKAIEEMGFTKMTEIQRRGIPPLLAGKDVLGA 155
Query: 468 AKTGTGKTLAFGIPIIKRL 524
AKTG+GKTLAF IP ++ L
Sbjct: 156 AKTGSGKTLAFLIPAVEML 174
[232][TOP]
>UniRef100_Q4JVT2 Putative ATP-dependent RNA helicase n=1 Tax=Corynebacterium
jeikeium K411 RepID=Q4JVT2_CORJK
Length = 382
Score = 61.2 bits (147), Expect = 4e-08
Identities = 29/63 (46%), Positives = 40/63 (63%)
Frame = +3
Query: 348 KLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
KL L + + L GIT FPIQ A + A++GRD++ R TG+GKT FG+P+I+RL
Sbjct: 8 KLGLDDCITKELSAEGITKPFPIQAAAIPAAVEGRDVLGRGPTGSGKTFTFGLPMIQRLR 67
Query: 528 EEA 536
A
Sbjct: 68 RGA 70
[233][TOP]
>UniRef100_Q2IDR6 DEAD/DEAH box helicase-like protein n=1 Tax=Anaeromyxobacter
dehalogenans 2CP-C RepID=Q2IDR6_ANADE
Length = 487
Score = 61.2 bits (147), Expect = 4e-08
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 530
L+L ++ +LE+ G H PIQ + PAL GRD+I A TGTGKT AF +PII+RL+
Sbjct: 20 LNLSEKTLHALERAGFEHPTPIQTQAIPPALAGRDVIGAAATGTGKTAAFLLPIIERLSG 79
Query: 531 EA 536
A
Sbjct: 80 AA 81
[234][TOP]
>UniRef100_Q0S0C7 ATP-dependent RNA helicase n=1 Tax=Rhodococcus jostii RHA1
RepID=Q0S0C7_RHOSR
Length = 465
Score = 61.2 bits (147), Expect = 4e-08
Identities = 29/58 (50%), Positives = 40/58 (68%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 524
L LP + +L++ GI FPIQ A + L GRD++ RA TG+GKTLAFG+P++ RL
Sbjct: 19 LGLPAVMTHALDRSGIGAPFPIQAATIPDVLAGRDVLGRAPTGSGKTLAFGLPMLVRL 76
[235][TOP]
>UniRef100_B8HHG4 DEAD/DEAH box helicase domain protein n=1 Tax=Arthrobacter
chlorophenolicus A6 RepID=B8HHG4_ARTCA
Length = 631
Score = 61.2 bits (147), Expect = 4e-08
Identities = 28/60 (46%), Positives = 39/60 (65%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 530
L P+ L ++L +GI FPIQ L L GRD++ R +TG+GKT+AF IP++ RL E
Sbjct: 7 LGTPKALADTLTAQGIVEPFPIQVKTLPDTLSGRDVLGRGRTGSGKTIAFAIPLVARLAE 66
[236][TOP]
>UniRef100_B8DQE9 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfovibrio
vulgaris str. 'Miyazaki F' RepID=B8DQE9_DESVM
Length = 531
Score = 61.2 bits (147), Expect = 4e-08
Identities = 28/65 (43%), Positives = 44/65 (67%)
Frame = +3
Query: 330 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 509
E L +LSL + + +++E+ G PIQ + L+GRD+I +A+TGTGKT AFGIP
Sbjct: 2 ETLRFEELSLSKEILKAIEEMGFEETSPIQALAIPHILEGRDVIGQAQTGTGKTAAFGIP 61
Query: 510 IIKRL 524
+++R+
Sbjct: 62 LLERI 66
[237][TOP]
>UniRef100_B4RW58 ATP-dependent RNA helicase RhlE n=1 Tax=Alteromonas macleodii 'Deep
ecotype' RepID=B4RW58_ALTMD
Length = 480
Score = 61.2 bits (147), Expect = 4e-08
Identities = 27/63 (42%), Positives = 45/63 (71%)
Frame = +3
Query: 336 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
++ ++L L + L +++EKRG + PIQ + L+G+D++A A+TGTGKT FG+PI+
Sbjct: 1 MSFTQLGLAEPLLKAIEKRGFSTPSPIQEKAIPEVLEGKDVLAAAQTGTGKTAGFGLPIL 60
Query: 516 KRL 524
+RL
Sbjct: 61 QRL 63
[238][TOP]
>UniRef100_A1RAH9 Putative ATP-dependent RNA helicase n=1 Tax=Arthrobacter aurescens
TC1 RepID=A1RAH9_ARTAT
Length = 576
Score = 61.2 bits (147), Expect = 4e-08
Identities = 29/60 (48%), Positives = 38/60 (63%)
Frame = +3
Query: 351 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 530
L P+ + ESL GI FPIQ L L GRD++ R +TG+GKT+AF IP++ RL E
Sbjct: 10 LGTPKPIAESLAADGIEEAFPIQVKTLPDTLAGRDVLGRGRTGSGKTIAFAIPLVARLAE 69
[239][TOP]
>UniRef100_C9Z4R9 Probable DEAD-box RNA helicase n=1 Tax=Streptomyces scabiei 87.22
RepID=C9Z4R9_STRSC
Length = 497
Score = 61.2 bits (147), Expect = 4e-08
Identities = 28/61 (45%), Positives = 42/61 (68%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
A L +P++L L ++G+T FPIQ A L +L GRD++ R +TG+GKTLAFG+ ++
Sbjct: 70 AFDDLDMPRQLLAELHRQGVTVPFPIQGATLPNSLAGRDVLGRGRTGSGKTLAFGLALLA 129
Query: 519 R 521
R
Sbjct: 130 R 130
[240][TOP]
>UniRef100_C8RT23 ATP-dependent RNA helicase n=1 Tax=Corynebacterium jeikeium ATCC
43734 RepID=C8RT23_CORJE
Length = 382
Score = 61.2 bits (147), Expect = 4e-08
Identities = 29/63 (46%), Positives = 40/63 (63%)
Frame = +3
Query: 348 KLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLT 527
KL L + + L GIT FPIQ A + A++GRD++ R TG+GKT FG+P+I+RL
Sbjct: 8 KLGLDDCITKELSAEGITKPFPIQAAAIPAAVEGRDVLGRGPTGSGKTFTFGLPMIQRLR 67
Query: 528 EEA 536
A
Sbjct: 68 RGA 70
[241][TOP]
>UniRef100_C1XGK2 ATP-dependent RNA helicase DbpA n=1 Tax=Meiothermus ruber DSM 1279
RepID=C1XGK2_MEIRU
Length = 556
Score = 61.2 bits (147), Expect = 4e-08
Identities = 28/63 (44%), Positives = 43/63 (68%)
Frame = +3
Query: 336 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
+ S +L + ++++ +G T PIQ A + AL+G+D++ +A+TGTGKTLAFGIPI
Sbjct: 1 MEFSAFTLRPEVAQAIQAKGFTTATPIQAAAIPLALEGKDVLGQARTGTGKTLAFGIPIA 60
Query: 516 KRL 524
RL
Sbjct: 61 NRL 63
[242][TOP]
>UniRef100_C1UJ11 DNA/RNA helicase, superfamily II n=1 Tax=Geodermatophilus obscurus
DSM 43160 RepID=C1UJ11_9ACTO
Length = 531
Score = 61.2 bits (147), Expect = 4e-08
Identities = 30/64 (46%), Positives = 41/64 (64%)
Frame = +3
Query: 333 ELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPI 512
+ + L +P L E L GIT FPIQ A L +L GRD++ R +TG+GKTLAF +P+
Sbjct: 62 DATFADLGVPAPLVEVLTASGITAPFPIQVATLPDSLAGRDVLGRGRTGSGKTLAFSLPL 121
Query: 513 IKRL 524
+ RL
Sbjct: 122 VARL 125
[243][TOP]
>UniRef100_C0XT53 Possible ATP-dependent RNA helicase n=1 Tax=Corynebacterium
lipophiloflavum DSM 44291 RepID=C0XT53_9CORY
Length = 430
Score = 61.2 bits (147), Expect = 4e-08
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
+ + L LP+ + L K+GIT FPIQ + AL GRD++ R TG+GKT FG+P++
Sbjct: 3 SFADLGLPRPIVNVLAKQGITQPFPIQEEAIPDALAGRDVLGRGPTGSGKTFTFGLPMLA 62
Query: 519 RL 524
RL
Sbjct: 63 RL 64
[244][TOP]
>UniRef100_B5HIH6 ATP-dependent RNA helicase n=1 Tax=Streptomyces pristinaespiralis
ATCC 25486 RepID=B5HIH6_STRPR
Length = 467
Score = 61.2 bits (147), Expect = 4e-08
Identities = 28/61 (45%), Positives = 41/61 (67%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
+ ++L LP + + G+T FPIQ A L AL GRD++ RA+TG+GKTLAFG+ ++
Sbjct: 39 SFAELGLPPEVARVMTGSGVTEPFPIQAATLPDALAGRDVLGRARTGSGKTLAFGLALLT 98
Query: 519 R 521
R
Sbjct: 99 R 99
[245][TOP]
>UniRef100_A4ALD0 ATP-dependent RNA helicase n=1 Tax=marine actinobacterium PHSC20C1
RepID=A4ALD0_9ACTN
Length = 499
Score = 61.2 bits (147), Expect = 4e-08
Identities = 28/63 (44%), Positives = 43/63 (68%)
Frame = +3
Query: 336 LAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPII 515
+ S+L++ Q + ++L +GI FPIQ + L G+DII +AKTGTGKTL FG+P++
Sbjct: 1 MTFSELNIDQDMVDALATKGILEPFPIQTQTIPMGLAGQDIIGQAKTGTGKTLGFGLPVL 60
Query: 516 KRL 524
+ L
Sbjct: 61 QSL 63
[246][TOP]
>UniRef100_C1FFV4 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FFV4_9CHLO
Length = 631
Score = 61.2 bits (147), Expect = 4e-08
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Frame = +3
Query: 315 EADDGE----ELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGT 482
EA DG+ E +S +L + + LE +GIT L+ IQ P L G+D++ RA+TG
Sbjct: 15 EASDGDASVDENHVSNFNLSKEVCARLETKGITSLYSIQAQCFQPILDGKDLVGRARTGC 74
Query: 483 GKTLAFGIPIIKRLTEE 533
GKTLAF +PI++ + E
Sbjct: 75 GKTLAFVLPIVEVINRE 91
[247][TOP]
>UniRef100_A4RW46 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RW46_OSTLU
Length = 654
Score = 61.2 bits (147), Expect = 4e-08
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Frame = +3
Query: 288 DLDGDN----NNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRD 455
D++G++ E ++ LA+ +L + ++ +L K+G LF IQ L AL G+D
Sbjct: 63 DVEGEDAIEVGTPEPEEPNPLALDNFALSEPVKATLRKKGFDALFAIQAETLEIALSGKD 122
Query: 456 IIARAKTGTGKTLAFGIPIIKRLTE 530
++ RA+TG GKTLAF +PI++ + +
Sbjct: 123 VVGRARTGCGKTLAFVLPIVEEMAK 147
[248][TOP]
>UniRef100_B6QB93 DEAD box RNA helicase HelA, putative n=1 Tax=Penicillium marneffei
ATCC 18224 RepID=B6QB93_PENMQ
Length = 667
Score = 61.2 bits (147), Expect = 4e-08
Identities = 42/138 (30%), Positives = 71/138 (51%)
Frame = +3
Query: 111 SNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYD 290
++ ++ L KP +S +R+ R I SS+LL S+ AT + +E+F S+
Sbjct: 29 TSTVTAHLQKPLPLTISSLRQIRSIQSSALLKQSS-ATAAATKPQESFSSIS-------- 79
Query: 291 LDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARA 470
+ ELA P+ + EK I + +Q+ + ++ G DI+A+A
Sbjct: 80 -----------EFSELAQHGYVHPRIIHSITEKMKINSMTDVQKQTISHSVTGADILAQA 128
Query: 471 KTGTGKTLAFGIPIIKRL 524
KTGTGKTLAF +P+++R+
Sbjct: 129 KTGTGKTLAFLVPVLQRI 146
[249][TOP]
>UniRef100_A4R8B5 ATP-dependent RNA helicase HAS1 n=1 Tax=Magnaporthe grisea
RepID=HAS1_MAGGR
Length = 587
Score = 61.2 bits (147), Expect = 4e-08
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +3
Query: 288 DLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIAR 467
D+ GD + E A S+L+L + +++E+ G T + IQR + P L G+D++
Sbjct: 96 DIPGDLTLPTTAESEAQAFSELNLSENTMKAIEEMGFTKMTEIQRRGIPPLLAGKDVLGA 155
Query: 468 AKTGTGKTLAFGIPIIKRL 524
AKTG+GKTLAF IP ++ L
Sbjct: 156 AKTGSGKTLAFLIPAVEML 174
[250][TOP]
>UniRef100_UPI0001B57C5D putative DEAD-box RNA helicase n=1 Tax=Streptomyces sp. C
RepID=UPI0001B57C5D
Length = 422
Score = 60.8 bits (146), Expect = 6e-08
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = +3
Query: 339 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 518
A + +P+ L ++L +G+T FPIQ A L +L GRD++ R +TG+GKTLAFG+ ++
Sbjct: 14 AFEDMDMPEALLKTLAAQGVTEPFPIQAATLPNSLAGRDLLGRGRTGSGKTLAFGLALLA 73
Query: 519 R 521
R
Sbjct: 74 R 74