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[1][TOP]
>UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis
thaliana RepID=RPB1_ARATH
Length = 1840
Score = 207 bits (528), Expect = 2e-52
Identities = 107/107 (100%), Positives = 107/107 (100%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG
Sbjct: 1035 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1094
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL
Sbjct: 1095 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 1141
[2][TOP]
>UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA
binding / DNA-directed RNA polymerase n=1 Tax=Vitis
vinifera RepID=UPI0001985649
Length = 1848
Score = 201 bits (511), Expect = 2e-50
Identities = 102/107 (95%), Positives = 106/107 (99%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATLFFNILLRST ASKRVL+EY+L+REAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG
Sbjct: 1033 ATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYL
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139
[3][TOP]
>UniRef100_A7NVN7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A7NVN7_VITVI
Length = 1010
Score = 201 bits (511), Expect = 2e-50
Identities = 102/107 (95%), Positives = 106/107 (99%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATLFFNILLRST ASKRVL+EY+L+REAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG
Sbjct: 270 ATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 329
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYL
Sbjct: 330 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 376
[4][TOP]
>UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5YGY9_SORBI
Length = 1857
Score = 200 bits (508), Expect = 5e-50
Identities = 101/107 (94%), Positives = 106/107 (99%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATLFFNILLRST ASKRVL+EY+L++EAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG
Sbjct: 1032 ATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1091
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYL
Sbjct: 1092 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1138
[5][TOP]
>UniRef100_B9FZ51 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FZ51_ORYSJ
Length = 1526
Score = 200 bits (508), Expect = 5e-50
Identities = 101/107 (94%), Positives = 106/107 (99%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATLFFNILLRST ASKRVL+EY+L++EAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG
Sbjct: 704 ATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 763
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYL
Sbjct: 764 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 810
[6][TOP]
>UniRef100_B8BAW1 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
RepID=B8BAW1_ORYSI
Length = 1449
Score = 200 bits (508), Expect = 5e-50
Identities = 101/107 (94%), Positives = 106/107 (99%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATLFFNILLRST ASKRVL+EY+L++EAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG
Sbjct: 1003 ATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1062
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYL
Sbjct: 1063 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1109
[7][TOP]
>UniRef100_B9SXC0 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SXC0_RICCO
Length = 1855
Score = 197 bits (502), Expect = 2e-49
Identities = 99/107 (92%), Positives = 106/107 (99%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATLFF ILLRSTLASKRVLE+Y+L+REAF+WVIGEIESRFLQSLVAPGEMIGCVAAQSIG
Sbjct: 1033 ATLFFGILLRSTLASKRVLEDYRLTREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1092
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLS++L
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIFL 1139
[8][TOP]
>UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351
Length = 2085
Score = 197 bits (501), Expect = 3e-49
Identities = 100/107 (93%), Positives = 105/107 (98%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATLFFNILLRST ASKRVL+EY+L++EAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG
Sbjct: 1034 ATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1093
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK IKTPSLSV+L
Sbjct: 1094 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKNIKTPSLSVHL 1140
[9][TOP]
>UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q5WMZ9_ORYSJ
Length = 1741
Score = 197 bits (501), Expect = 3e-49
Identities = 100/107 (93%), Positives = 105/107 (98%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATLFFNILLRST ASKRVL+EY+L++EAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG
Sbjct: 981 ATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1040
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK IKTPSLSV+L
Sbjct: 1041 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKNIKTPSLSVHL 1087
[10][TOP]
>UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DKN9_ORYSJ
Length = 1834
Score = 197 bits (501), Expect = 3e-49
Identities = 100/107 (93%), Positives = 105/107 (98%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATLFFNILLRST ASKRVL+EY+L++EAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG
Sbjct: 1034 ATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1093
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK IKTPSLSV+L
Sbjct: 1094 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKNIKTPSLSVHL 1140
[11][TOP]
>UniRef100_A7R1R2 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A7R1R2_VITVI
Length = 429
Score = 194 bits (492), Expect = 3e-48
Identities = 98/107 (91%), Positives = 103/107 (96%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNILLRST +SKRVL EY+LSREAF+WVIGEIESRFLQSLV+PGEMIGC+AAQSIG
Sbjct: 290 ATLLFNILLRSTFSSKRVLNEYRLSREAFDWVIGEIESRFLQSLVSPGEMIGCIAAQSIG 349
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK IKTPSLSVYL
Sbjct: 350 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKIIKTPSLSVYL 396
[12][TOP]
>UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99368_SOYBN
Length = 977
Score = 191 bits (485), Expect = 2e-47
Identities = 97/107 (90%), Positives = 102/107 (95%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNILLRST ASKRVLEEY+LSRE+FEWV+GEIESRFLQSLV PGEMIG VAAQSIG
Sbjct: 225 ATLLFNILLRSTFASKRVLEEYRLSRESFEWVVGEIESRFLQSLVVPGEMIGVVAAQSIG 284
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRLRE+INVAK IKTPSLSVYL
Sbjct: 285 EPATQMTLNTFHFAGVSAKNVTLGVPRLRELINVAKSIKTPSLSVYL 331
[13][TOP]
>UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U396_PHYPA
Length = 1742
Score = 191 bits (485), Expect = 2e-47
Identities = 95/107 (88%), Positives = 104/107 (97%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATLFF LLRSTLASKRVL++Y+L+REAFEWVIGE+E+RFL SLVAPGEMIGCVAAQSIG
Sbjct: 1036 ATLFFGCLLRSTLASKRVLKDYRLTREAFEWVIGEVETRFLMSLVAPGEMIGCVAAQSIG 1095
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAK+IKTPSL+VYL
Sbjct: 1096 EPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLTVYL 1142
[14][TOP]
>UniRef100_A9TK89 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TK89_PHYPA
Length = 1646
Score = 187 bits (474), Expect = 4e-46
Identities = 93/107 (86%), Positives = 103/107 (96%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATLFF LLRSTLASKRVL++Y+L+REAF+WVIGEIE+RFL SLVAPGEMIGCVAAQSIG
Sbjct: 1021 ATLFFGCLLRSTLASKRVLKDYRLTREAFDWVIGEIETRFLMSLVAPGEMIGCVAAQSIG 1080
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAK+ KTPSL+V+L
Sbjct: 1081 EPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKTKTPSLTVFL 1127
[15][TOP]
>UniRef100_C5Y387 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Y387_SORBI
Length = 1874
Score = 182 bits (462), Expect = 1e-44
Identities = 93/107 (86%), Positives = 99/107 (92%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATLFFNI LR+T ASKRVL EY+L+REAFEW+I EI RF QSLVAP EMIGCVAAQSIG
Sbjct: 1033 ATLFFNIHLRATFASKRVLREYRLTREAFEWIIDEIVWRFSQSLVAPSEMIGCVAAQSIG 1092
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYL
Sbjct: 1093 EPATQMTLNTFHFAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139
[16][TOP]
>UniRef100_Q30BD9 DNA-directed RNA polymerase n=1 Tax=Glaucocystis nostochinearum
RepID=Q30BD9_9EUKA
Length = 1852
Score = 172 bits (435), Expect = 1e-41
Identities = 83/107 (77%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ F IL+RS LASKRVL EY+L+ AFEW++GEIESRFLQ++ PGEM+G +AAQSIG
Sbjct: 1024 ATMLFQILVRSCLASKRVLTEYRLTSHAFEWLLGEIESRFLQAIANPGEMVGAIAAQSIG 1083
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EIINVAK++KTPSL VYL
Sbjct: 1084 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINVAKKVKTPSLVVYL 1130
[17][TOP]
>UniRef100_UPI000186501C hypothetical protein BRAFLDRAFT_115025 n=1 Tax=Branchiostoma floridae
RepID=UPI000186501C
Length = 1956
Score = 169 bits (429), Expect = 7e-41
Identities = 81/107 (75%), Positives = 99/107 (92%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ FN LLRSTL ++RVLEE++LS EAF+W++GEIESRF Q++V PGEM+G +AAQS+G
Sbjct: 1033 ATILFNTLLRSTLCTRRVLEEFRLSTEAFDWLLGEIESRFNQAIVQPGEMVGALAAQSLG 1092
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 1139
[18][TOP]
>UniRef100_C3ZES3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3ZES3_BRAFL
Length = 1934
Score = 169 bits (429), Expect = 7e-41
Identities = 81/107 (75%), Positives = 99/107 (92%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ FN LLRSTL ++RVLEE++LS EAF+W++GEIESRF Q++V PGEM+G +AAQS+G
Sbjct: 1033 ATILFNTLLRSTLCTRRVLEEFRLSTEAFDWLLGEIESRFNQAIVQPGEMVGALAAQSLG 1092
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 1139
[19][TOP]
>UniRef100_UPI0000F24379 DNA-directed RNA polymerase II largest subunit (RNA polymerase II
subunit 1) (B220) n=1 Tax=Pichia stipitis CBS 6054
RepID=UPI0000F24379
Length = 1739
Score = 168 bits (425), Expect = 2e-40
Identities = 80/107 (74%), Positives = 98/107 (91%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RS LAS+RV+EE+KL+R +FEWV+GEIE++F +S+V PGEM+G +AAQSIG
Sbjct: 1015 ATLLFQCLVRSRLASRRVIEEFKLNRSSFEWVVGEIETQFQKSIVHPGEMVGVIAAQSIG 1074
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EI+NVAK IKTP+L+VYL
Sbjct: 1075 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPALTVYL 1121
[20][TOP]
>UniRef100_A3GID7 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3GID7_PICST
Length = 1739
Score = 168 bits (425), Expect = 2e-40
Identities = 80/107 (74%), Positives = 98/107 (91%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RS LAS+RV+EE+KL+R +FEWV+GEIE++F +S+V PGEM+G +AAQSIG
Sbjct: 1015 ATLLFQCLVRSRLASRRVIEEFKLNRSSFEWVVGEIETQFQKSIVHPGEMVGVIAAQSIG 1074
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EI+NVAK IKTP+L+VYL
Sbjct: 1075 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPALTVYL 1121
[21][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
discoideum RepID=RPB1_DICDI
Length = 1727
Score = 168 bits (425), Expect = 2e-40
Identities = 80/107 (74%), Positives = 98/107 (91%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ F+IL+RST ASKRVL E++L+ +AF WV GEIES+FLQ+L PGEM+G +AAQSIG
Sbjct: 1033 ATMLFSILVRSTFASKRVLTEFRLTEKAFLWVCGEIESKFLQALAHPGEMVGALAAQSIG 1092
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EIIN+AK++KTPSL++YL
Sbjct: 1093 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINIAKQVKTPSLTIYL 1139
[22][TOP]
>UniRef100_A7S8F9 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7S8F9_NEMVE
Length = 1929
Score = 167 bits (424), Expect = 3e-40
Identities = 83/107 (77%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNILLRSTL +KRV EE+ LS EAFEW++GEIE+RF S V PGEM+G +AAQS+G
Sbjct: 1033 ATLLFNILLRSTLCTKRVAEEFHLSSEAFEWLLGEIETRFNHSHVKPGEMVGALAAQSLG 1092
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 1139
[23][TOP]
>UniRef100_UPI00003BD271 hypothetical protein DEHA0A14036g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BD271
Length = 1749
Score = 167 bits (423), Expect = 3e-40
Identities = 81/107 (75%), Positives = 98/107 (91%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F LLRS LA++RV+EE+KLSR +FEWV+GEIE++F +S+V PGEM+G +AAQSIG
Sbjct: 1020 ATLLFQCLLRSRLATRRVIEEFKLSRISFEWVMGEIETQFQKSIVHPGEMVGVIAAQSIG 1079
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EI+NVAK IKTP+L+VYL
Sbjct: 1080 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPALTVYL 1126
[24][TOP]
>UniRef100_B5RSM9 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RSM9_DEBHA
Length = 1749
Score = 167 bits (423), Expect = 3e-40
Identities = 81/107 (75%), Positives = 98/107 (91%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F LLRS LA++RV+EE+KLSR +FEWV+GEIE++F +S+V PGEM+G +AAQSIG
Sbjct: 1020 ATLLFQCLLRSRLATRRVIEEFKLSRISFEWVMGEIETQFQKSIVHPGEMVGVIAAQSIG 1079
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EI+NVAK IKTP+L+VYL
Sbjct: 1080 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPALTVYL 1126
[25][TOP]
>UniRef100_A9QME6 RNA polymerase 2 (Fragment) n=1 Tax=Pellioditis sp. JU274
RepID=A9QME6_9PELO
Length = 526
Score = 167 bits (422), Expect = 4e-40
Identities = 79/107 (73%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL SK++ YKL+ EAFEW++GE+E+RF Q++ PGEM+G +AAQS+G
Sbjct: 143 ATLLMNILLRSTLCSKKMASTYKLNAEAFEWLLGEVETRFQQAIAQPGEMVGALAAQSLG 202
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+VYL
Sbjct: 203 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVYL 249
[26][TOP]
>UniRef100_A9QMH0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Panagrellus
redivivus RepID=A9QMH0_PANRE
Length = 636
Score = 166 bits (421), Expect = 6e-40
Identities = 82/107 (76%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRST A+K+V E YKL+ EAFEW+IGEIESRF Q++V PGEM+G +AAQS+G
Sbjct: 247 ATLLMNILLRSTFATKQVAEVYKLTNEAFEWIIGEIESRFNQAIVQPGEMVGPLAAQSLG 306
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 307 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKQPKTPSLTVFL 353
[27][TOP]
>UniRef100_A8PU11 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PU11_BRUMA
Length = 1943
Score = 166 bits (421), Expect = 6e-40
Identities = 80/107 (74%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL +KR+ E+++L+ E FEW+IGEIESRF Q++V PGEM+G +AAQS+G
Sbjct: 1102 ATLLMNILLRSTLCAKRMAEKHRLNSEGFEWLIGEIESRFKQAIVQPGEMVGAIAAQSLG 1161
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 1162 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 1208
[28][TOP]
>UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WN64_CANDC
Length = 1735
Score = 166 bits (421), Expect = 6e-40
Identities = 80/107 (74%), Positives = 98/107 (91%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F LLRS LA++RV+EE+KL+R +FEWV+GEIE++F +S+V PGEM+G VAAQSIG
Sbjct: 1015 ATLLFQCLLRSRLAARRVIEEFKLNRVSFEWVLGEIETQFQKSIVHPGEMVGVVAAQSIG 1074
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EI+NVAK IKTP+++VYL
Sbjct: 1075 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPAMTVYL 1121
[29][TOP]
>UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1
Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO
Length = 1752
Score = 166 bits (421), Expect = 6e-40
Identities = 79/107 (73%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F ILLRS A KRV+ EY+L++ AFEW++GE+E+RF Q++V+PGEM+G +AAQSIG
Sbjct: 1017 ATLLFQILLRSKFAVKRVIMEYRLNKVAFEWIMGEVEARFQQAVVSPGEMVGTLAAQSIG 1076
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EI+NVAK IKTPSL++YL
Sbjct: 1077 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPSLTIYL 1123
[30][TOP]
>UniRef100_Q23699 DNA-directed RNA polymerase (Fragment) n=1 Tax=Crassostrea gigas
RepID=Q23699_CRAGI
Length = 1340
Score = 166 bits (420), Expect = 8e-40
Identities = 80/107 (74%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +KRV EE++LS EAFEW+IGE+ESRF Q+ PGEM+G +AAQS+G
Sbjct: 948 ATLLFKCLIRSTLCAKRVTEEFRLSSEAFEWLIGEVESRFQQAQAHPGEMVGALAAQSLG 1007
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIIN++K+ KTPSL+VYL
Sbjct: 1008 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINISKKPKTPSLTVYL 1054
[31][TOP]
>UniRef100_A9QMG9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Poikilolaimus
regenfussi RepID=A9QMG9_9BILA
Length = 620
Score = 166 bits (420), Expect = 8e-40
Identities = 80/107 (74%), Positives = 98/107 (91%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL SK+V E+++L++EAFEW+IGEIE+RF Q++ PGEM+G +AAQS+G
Sbjct: 238 ATLLMNILLRSTLCSKQVAEKHRLNQEAFEWLIGEIETRFXQAIAQPGEMVGALAAQSLG 297
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 298 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQPKTPSLTVFL 344
[32][TOP]
>UniRef100_A9QMG8 RNA polymerase 2 (Fragment) n=1 Tax=rhabditoid sp. PDL15
RepID=A9QMG8_9BILA
Length = 587
Score = 166 bits (420), Expect = 8e-40
Identities = 80/107 (74%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL SK+V E+Y+L+ EAFEW++GEIE+RF Q++ PGEM+G +AAQS+G
Sbjct: 230 ATLLMNILLRSTLCSKQVAEKYRLNSEAFEWLLGEIETRFQQAIAQPGEMVGALAAQSLG 289
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 290 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQPKTPSLTVFL 336
[33][TOP]
>UniRef100_UPI0000546D90 PREDICTED: im:7136071 isoform 1 n=1 Tax=Danio rerio
RepID=UPI0000546D90
Length = 1972
Score = 166 bits (419), Expect = 1e-39
Identities = 79/107 (73%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL SKR+ EE++LS EAF+W++GEIE++F QS+ PGEM+G +AAQS+G
Sbjct: 1034 ATLLFNIHLRSTLCSKRMTEEFRLSTEAFDWLLGEIETKFNQSIAHPGEMVGALAAQSLG 1093
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++KR KTPSL+V+L
Sbjct: 1094 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKRPKTPSLTVFL 1140
[34][TOP]
>UniRef100_UPI00017B0A92 UPI00017B0A92 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0A92
Length = 1714
Score = 166 bits (419), Expect = 1e-39
Identities = 79/107 (73%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL SKR+ EE++LS EAF+W++GEIE++F QS+ PGEM+G +AAQS+G
Sbjct: 1015 ATLLFNIHLRSTLCSKRMTEEFRLSTEAFDWLLGEIETKFNQSIAHPGEMVGALAAQSLG 1074
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++KR KTPSL+V+L
Sbjct: 1075 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKRPKTPSLTVFL 1121
[35][TOP]
>UniRef100_Q4SF83 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon nigroviridis
RepID=Q4SF83_TETNG
Length = 1745
Score = 166 bits (419), Expect = 1e-39
Identities = 79/107 (73%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL SKR+ EE++LS EAF+W++GEIE++F QS+ PGEM+G +AAQS+G
Sbjct: 946 ATLLFNIHLRSTLCSKRMTEEFRLSTEAFDWLLGEIETKFNQSIAHPGEMVGALAAQSLG 1005
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++KR KTPSL+V+L
Sbjct: 1006 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKRPKTPSLTVFL 1052
[36][TOP]
>UniRef100_A9QMP5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Oscheius insectivora
RepID=A9QMP5_9BILA
Length = 474
Score = 166 bits (419), Expect = 1e-39
Identities = 78/107 (72%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL SK++ YKL++EAFEW++GE+E+RF Q++ PGEM+G +AAQS+G
Sbjct: 235 ATLLMNILLRSTLCSKKMATTYKLNQEAFEWLLGEVETRFKQAIAQPGEMVGALAAQSLG 294
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 295 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVFL 341
[37][TOP]
>UniRef100_A9QMF9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditis rainai
RepID=A9QMF9_9BILA
Length = 618
Score = 166 bits (419), Expect = 1e-39
Identities = 79/107 (73%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL SKR+ YKL+ EAFEW++GE+E+RF Q++ PGEM+G +AAQS+G
Sbjct: 237 ATLLMNILLRSTLCSKRMASMYKLNSEAFEWLLGEVETRFKQAIAQPGEMVGALAAQSLG 296
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K++KTPSLSV+L
Sbjct: 297 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKQLKTPSLSVFL 343
[38][TOP]
>UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JYP8_SCHJY
Length = 1748
Score = 166 bits (419), Expect = 1e-39
Identities = 82/107 (76%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F ILLRS LA+KRV+ EY L++ AFEW+IGEIE+RF Q V PGEM+G +AAQSIG
Sbjct: 1017 ATLLFQILLRSKLATKRVVMEYHLNKIAFEWIIGEIEARFQQCQVNPGEMVGTLAAQSIG 1076
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EI+NVAK IKTPSL++YL
Sbjct: 1077 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPSLTIYL 1123
[39][TOP]
>UniRef100_Q9BN99 RNA polymerase II largest subunit (Fragment) n=1 Tax=Stenochrus
portoricensis RepID=Q9BN99_9ARAC
Length = 256
Score = 165 bits (417), Expect = 2e-39
Identities = 80/107 (74%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F LLRS L +KRV EE++LS EAFEW++GEIE+RF Q+ V PGEM+G +AAQS+G
Sbjct: 45 ATLLFRALLRSVLCTKRVAEEFRLSSEAFEWLLGEIETRFQQAQVQPGEMVGALAAQSLG 104
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIIN++KR KTPSL+V+L
Sbjct: 105 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINISKRPKTPSLTVFL 151
[40][TOP]
>UniRef100_Q5ACI7 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q5ACI7_CANAL
Length = 1728
Score = 165 bits (417), Expect = 2e-39
Identities = 79/107 (73%), Positives = 98/107 (91%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F LLRS LA++RV+EE+KL+R +FEWV+GEIE++F +S+V PGEM+G VAAQSIG
Sbjct: 1015 ATLLFQCLLRSRLAARRVIEEFKLNRASFEWVMGEIETQFQKSIVHPGEMVGVVAAQSIG 1074
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EI+NVAK IKTP+++V+L
Sbjct: 1075 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPAMTVFL 1121
[41][TOP]
>UniRef100_C4YN85 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=C4YN85_CANAL
Length = 1742
Score = 165 bits (417), Expect = 2e-39
Identities = 79/107 (73%), Positives = 98/107 (91%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F LLRS LA++RV+EE+KL+R +FEWV+GEIE++F +S+V PGEM+G VAAQSIG
Sbjct: 1015 ATLLFQCLLRSRLAARRVIEEFKLNRASFEWVMGEIETQFQKSIVHPGEMVGVVAAQSIG 1074
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EI+NVAK IKTP+++V+L
Sbjct: 1075 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPAMTVFL 1121
[42][TOP]
>UniRef100_C4Y5N4 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720
RepID=C4Y5N4_CLAL4
Length = 1402
Score = 165 bits (417), Expect = 2e-39
Identities = 79/107 (73%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RS LA++R++EE+KLSR +FEWV GEIE++F +S+V PGEM+G +AAQSIG
Sbjct: 974 ATLLFQCLVRSRLAARRIIEEFKLSRISFEWVCGEIETQFQKSIVHPGEMVGVIAAQSIG 1033
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EI+NVAK IKTP+L+VYL
Sbjct: 1034 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPALTVYL 1080
[43][TOP]
>UniRef100_Q6E228 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditella axei
RepID=Q6E228_9BILA
Length = 621
Score = 164 bits (416), Expect = 2e-39
Identities = 78/107 (72%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ YKL+ E+FEW+IGEIE+RF Q++ PGEM+G +AAQS+G
Sbjct: 246 ATLLMNILIRSTLCSKKMASTYKLNAESFEWLIGEIETRFKQAIAQPGEMVGALAAQSLG 305
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K++KTPSL+VYL
Sbjct: 306 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVYL 352
[44][TOP]
>UniRef100_Q6E225 DNA-directed RNA polymerase (Fragment) n=1 Tax=Caenorhabditis sp.
SB341 RepID=Q6E225_9PELO
Length = 622
Score = 164 bits (416), Expect = 2e-39
Identities = 78/107 (72%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL SK++ KL+ EAF+W++GE+ESRF+QS+ PGEM+G +AAQS+G
Sbjct: 246 ATLLMNILLRSTLCSKKMATSAKLNTEAFDWLLGEVESRFMQSIAQPGEMVGALAAQSLG 305
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 306 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVFL 352
[45][TOP]
>UniRef100_Q25151 DNA-directed RNA polymerase (Fragment) n=1 Tax=Helobdella stagnalis
RepID=Q25151_9ANNE
Length = 1337
Score = 164 bits (416), Expect = 2e-39
Identities = 80/107 (74%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SKRV+EE+ LS EAFEW++GEIES+F+Q+ V PGEM+G +AAQS+G
Sbjct: 944 ATLLMNILVRSTLCSKRVIEEFHLSTEAFEWLMGEIESKFIQARVQPGEMVGALAAQSLG 1003
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ + PSL+V L
Sbjct: 1004 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPRAPSLTVIL 1050
[46][TOP]
>UniRef100_A9QMH1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acrobeles maximus
RepID=A9QMH1_9BILA
Length = 616
Score = 164 bits (416), Expect = 2e-39
Identities = 80/107 (74%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL SK+V + +KL+ EAFEW++GEIE+RF Q++ PGEM+G +AAQS+G
Sbjct: 246 ATLLMNILLRSTLCSKQVAKVHKLNTEAFEWILGEIETRFNQAIAQPGEMVGALAAQSLG 305
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+KR KTPSL+V+L
Sbjct: 306 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKRPKTPSLTVFL 352
[47][TOP]
>UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E6J4_LODEL
Length = 1745
Score = 164 bits (416), Expect = 2e-39
Identities = 79/107 (73%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RS LAS+RV+EE+KL++ +FEW +GEIE++F +S+V PGEM+G VAAQSIG
Sbjct: 1009 ATLLFQCLVRSRLASRRVIEEFKLNKASFEWALGEIETQFQKSVVHPGEMVGVVAAQSIG 1068
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EI+NVAK IKTP+L+VYL
Sbjct: 1069 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPALTVYL 1115
[48][TOP]
>UniRef100_P91819 DNA-directed RNA polymerase (Fragment) n=1 Tax=Zeldia punctata
RepID=P91819_ZELPU
Length = 629
Score = 164 bits (415), Expect = 3e-39
Identities = 79/107 (73%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL SK+V + +KL+ EAFEW++GEIE+RF Q++ PGEM+G +AAQS+G
Sbjct: 239 ATLLMNILLRSTLCSKQVAKVHKLNTEAFEWILGEIETRFNQAIAQPGEMVGALAAQSLG 298
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+KR KTPSL+++L
Sbjct: 299 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKRPKTPSLTIFL 345
[49][TOP]
>UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CBQ3_YARLI
Length = 1750
Score = 164 bits (415), Expect = 3e-39
Identities = 78/107 (72%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ F L+RS +KRV+EEY+L+R AFEWV+GEIE++F +S+V PGEM+G +AAQSIG
Sbjct: 1018 ATMLFQCLVRSRFPTKRVIEEYRLNRAAFEWVMGEIETQFAKSVVHPGEMVGVIAAQSIG 1077
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EI+NVAK IKTP+L+VYL
Sbjct: 1078 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPALTVYL 1124
[50][TOP]
>UniRef100_A1YIA7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pichia kudriavzevii
RepID=A1YIA7_ISSOR
Length = 1647
Score = 164 bits (415), Expect = 3e-39
Identities = 79/107 (73%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
+TL F L+RS LA++RVLEEYKL+++AFEWV+G I +F +SLV PGEM+G VAAQSIG
Sbjct: 938 STLLFQCLIRSKLATRRVLEEYKLNKDAFEWVVGTIAQQFARSLVNPGEMVGVVAAQSIG 997
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EI+NVAK KTP+L+VYL
Sbjct: 998 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNFKTPALTVYL 1044
[51][TOP]
>UniRef100_UPI00016E658E UPI00016E658E related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E658E
Length = 1628
Score = 164 bits (414), Expect = 4e-39
Identities = 78/107 (72%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL SKR+ EE++LS EAF+W++GEIE++F S+ PGEM+G +AAQS+G
Sbjct: 1035 ATLLFNIHLRSTLCSKRMTEEFRLSTEAFDWLLGEIETKFNHSIAHPGEMVGALAAQSLG 1094
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++KR KTPSL+V+L
Sbjct: 1095 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKRPKTPSLTVFL 1141
[52][TOP]
>UniRef100_Q9NJI9 RNA polymerase II largest subunit (Fragment) n=1 Tax=Tanystylum
orbiculare RepID=Q9NJI9_9CHEL
Length = 256
Score = 164 bits (414), Expect = 4e-39
Identities = 79/107 (73%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F LLRSTL SK+V EE++LS EAF+W++GEI++RF Q+ V PGEM+G +AAQS+G
Sbjct: 45 ATLLFQALLRSTLCSKKVAEEFRLSTEAFDWLLGEIDTRFQQAQVMPGEMVGALAAQSLG 104
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 105 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 151
[53][TOP]
>UniRef100_Q6JTX1 RNA polymerase II largest subunit (Fragment) n=1 Tax=Isohypsibius
elegans RepID=Q6JTX1_9BILA
Length = 304
Score = 164 bits (414), Expect = 4e-39
Identities = 78/107 (72%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ N +LRSTL SKR+ EEY L+ EAFEW++GEIESRF QS+V PGEM+G +AAQS+G
Sbjct: 168 ATILMNTMLRSTLCSKRMAEEYHLNTEAFEWLLGEIESRFAQSMVQPGEMVGALAAQSLG 227
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+E+INV+K +TPSL+V+L
Sbjct: 228 EPATQMTLNTFHFAGVSAKNVTLGVPRLKELINVSKNPRTPSLAVFL 274
[54][TOP]
>UniRef100_A9QMS7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cuticonema vivipara
RepID=A9QMS7_9BILA
Length = 407
Score = 164 bits (414), Expect = 4e-39
Identities = 79/107 (73%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL SKR+ E++KL+ EAFEW++GEIE++F Q++ PGEM+G +AAQS+G
Sbjct: 246 ATLLMNILLRSTLCSKRLAEKHKLNTEAFEWLLGEIETKFNQAIAQPGEMVGALAAQSLG 305
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K KTPSL+V+L
Sbjct: 306 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNPKTPSLTVFL 352
[55][TOP]
>UniRef100_A8BDP1 RNA polymerase II largest subunit (Fragment) n=1 Tax=Paragordius
varius RepID=A8BDP1_PARVA
Length = 467
Score = 164 bits (414), Expect = 4e-39
Identities = 80/107 (74%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT N L+RSTL ++RV EE+KLS +AF+WV+GEIESRF SLV PGEM+G ++AQS+G
Sbjct: 177 ATFLMNALIRSTLCTRRVAEEFKLSSDAFDWVLGEIESRFRSSLVDPGEMVGPLSAQSLG 236
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+KR KTPSL+V+L
Sbjct: 237 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKRPKTPSLTVFL 283
[56][TOP]
>UniRef100_UPI000151A8B3 hypothetical protein PGUG_01105 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B3
Length = 1018
Score = 163 bits (413), Expect = 5e-39
Identities = 78/107 (72%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RS LA++RV+EE++L+R +FEW +GEIE++F +SLV PGEM+G +AAQSIG
Sbjct: 281 ATLLFQCLVRSRLATRRVIEEFRLNRMSFEWAMGEIETQFQKSLVHPGEMVGVIAAQSIG 340
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EI+NVAK IKTP+L+VYL
Sbjct: 341 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPALTVYL 387
[57][TOP]
>UniRef100_Q9BNQ3 RNA polymerase II largest subunit (Fragment) n=1 Tax=Peripatus sp.
Per2 RepID=Q9BNQ3_9BILA
Length = 300
Score = 163 bits (413), Expect = 5e-39
Identities = 79/107 (73%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+R+TL SKRV +E+KLS EAFEW++GEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 45 ATLLMNILVRATLCSKRVTKEHKLSTEAFEWLLGEIETRFAQAQGQPGEMVGALAAQSLG 104
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIIN++K+ KTPSL+V+L
Sbjct: 105 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINISKKPKTPSLTVFL 151
[58][TOP]
>UniRef100_O01364 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cruznema tripartitum
RepID=O01364_9BILA
Length = 633
Score = 163 bits (413), Expect = 5e-39
Identities = 77/107 (71%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL SK++ YKL++EAF+W++GE+E+RF Q + PGEM+G +AAQS+G
Sbjct: 242 ATLLMNILLRSTLCSKQMASHYKLNQEAFDWLLGEVETRFQQPIAQPGEMVGALAAQSLG 301
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K +KTPSL+V+L
Sbjct: 302 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKMLKTPSLTVFL 348
[59][TOP]
>UniRef100_A5DCV3 DNA-directed RNA polymerase II subunit RPB1 (Fragments) n=1
Tax=Pichia guilliermondii RepID=RPB1_PICGU
Length = 1579
Score = 163 bits (413), Expect = 5e-39
Identities = 78/107 (72%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RS LA++RV+EE++L+R +FEW +GEIE++F +SLV PGEM+G +AAQSIG
Sbjct: 847 ATLLFQCLVRSRLATRRVIEEFRLNRMSFEWAMGEIETQFQKSLVHPGEMVGVIAAQSIG 906
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EI+NVAK IKTP+L+VYL
Sbjct: 907 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPALTVYL 953
[60][TOP]
>UniRef100_UPI0001796DD3 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase II subunit A) (DNA-directed RNA polymerase III
largest subunit) n=1 Tax=Equus caballus
RepID=UPI0001796DD3
Length = 1834
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1037 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1143
[61][TOP]
>UniRef100_UPI0000F2BF13 PREDICTED: similar to RNA polymerase II isoform 2 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF13
Length = 1932
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1037 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1143
[62][TOP]
>UniRef100_UPI0000F2BF12 PREDICTED: similar to RNA polymerase II isoform 1 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF12
Length = 1970
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1037 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1143
[63][TOP]
>UniRef100_UPI0000EBDCD2 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
isoform 4 n=1 Tax=Bos taurus RepID=UPI0000EBDCD2
Length = 1970
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1037 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1143
[64][TOP]
>UniRef100_UPI0000E24648 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Pan troglodytes RepID=UPI0000E24648
Length = 1913
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1037 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1143
[65][TOP]
>UniRef100_UPI00005A0B2C PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 23 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2C
Length = 1888
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1037 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1143
[66][TOP]
>UniRef100_UPI00005A0B2B PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 22 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2B
Length = 1892
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1039 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1098
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1099 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1145
[67][TOP]
>UniRef100_UPI00005A0B2A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 21 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2A
Length = 1896
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1039 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1098
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1099 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1145
[68][TOP]
>UniRef100_UPI00005A0B29 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 20 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B29
Length = 1891
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1006 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1065
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1066 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1112
[69][TOP]
>UniRef100_UPI00005A0B28 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 19 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B28
Length = 1908
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1023 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1082
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1083 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1129
[70][TOP]
>UniRef100_UPI00005A0B27 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 18 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B27
Length = 1831
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1037 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1143
[71][TOP]
>UniRef100_UPI00005A0B26 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 17 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B26
Length = 1684
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1027 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1086
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1087 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1133
[72][TOP]
>UniRef100_UPI00005A0B25 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 16 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B25
Length = 1752
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1027 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1086
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1087 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1133
[73][TOP]
>UniRef100_UPI00005A0B24 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 15 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B24
Length = 1924
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1039 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1098
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1099 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1145
[74][TOP]
>UniRef100_UPI00005A0B23 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 14 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B23
Length = 1653
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1010 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1069
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1070 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1116
[75][TOP]
>UniRef100_UPI00005A0B22 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 13 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B22
Length = 1722
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1010 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1069
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1070 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1116
[76][TOP]
>UniRef100_UPI00005A0B21 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 12 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B21
Length = 1922
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1037 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1143
[77][TOP]
>UniRef100_UPI00005A0B20 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 11 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B20
Length = 1923
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1038 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1097
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1098 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1144
[78][TOP]
>UniRef100_UPI00005A0B1F PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 10 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1F
Length = 1840
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1033 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1092
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1139
[79][TOP]
>UniRef100_UPI00005A0B1E PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 9 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1E
Length = 1851
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1033 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1092
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1139
[80][TOP]
>UniRef100_UPI00005A0B1D PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=2 Tax=Canis lupus familiaris
RepID=UPI00005A0B1D
Length = 1764
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1055 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1114
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1115 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1161
[81][TOP]
>UniRef100_UPI00005A0B1C PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 8 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1C
Length = 1719
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1031 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1090
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1091 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1137
[82][TOP]
>UniRef100_UPI00005A0B1B PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 7 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1B
Length = 1858
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1031 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1090
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1091 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1137
[83][TOP]
>UniRef100_UPI00005A0B1A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 6 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1A
Length = 1767
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1025 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1084
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1085 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1131
[84][TOP]
>UniRef100_UPI00005A0B19 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 5 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B19
Length = 1693
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1023 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1082
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1083 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1129
[85][TOP]
>UniRef100_UPI00005A0B17 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B17
Length = 1788
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1037 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1143
[86][TOP]
>UniRef100_UPI00005A0B16 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B16
Length = 1922
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1037 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1143
[87][TOP]
>UniRef100_UPI0001B7A25C UPI0001B7A25C related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25C
Length = 1968
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1039 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1098
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1099 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1145
[88][TOP]
>UniRef100_UPI0001B7A25B UPI0001B7A25B related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25B
Length = 1932
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1037 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1143
[89][TOP]
>UniRef100_UPI0000DA33D8 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Rattus norvegicus RepID=UPI0000DA33D8
Length = 1970
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1037 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1143
[90][TOP]
>UniRef100_UPI0001951285 220 kDa DNA-directed RNA polymerase polypeptide A n=1 Tax=Canis lupus
familiaris RepID=UPI0001951285
Length = 1969
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1037 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1143
[91][TOP]
>UniRef100_O35559 DNA-directed RNA polymerase n=1 Tax=Cricetulus griseus
RepID=O35559_CRIGR
Length = 1970
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1037 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1143
[92][TOP]
>UniRef100_O08847 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=O08847_MOUSE
Length = 1966
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1037 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1143
[93][TOP]
>UniRef100_A9QMG7 RNA polymerase 2 (Fragment) n=1 Tax=Distolabrellus veechi
RepID=A9QMG7_9BILA
Length = 583
Score = 163 bits (412), Expect = 6e-39
Identities = 78/107 (72%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ ++Y+L+ EAFEW++GEIE RF Q++V PGEM+G +AAQS+G
Sbjct: 229 ATLLMNILVRSTLCSKQMADKYRLNEEAFEWLLGEIEHRFQQAIVQPGEMVGALAAQSLG 288
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K KTPSL+VYL
Sbjct: 289 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKSPKTPSLTVYL 335
[94][TOP]
>UniRef100_A9QME7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pellioditis
mediterranea RepID=A9QME7_9PELO
Length = 618
Score = 163 bits (412), Expect = 6e-39
Identities = 78/107 (72%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL SK++ YKL+ EAFEW++GE+E+RF Q++ PGEM+G +AAQS+G
Sbjct: 243 ATLLMNILLRSTLCSKKMAVSYKLNSEAFEWLLGEVETRFKQAIAQPGEMVGPLAAQSLG 302
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K +KTPSL+V+L
Sbjct: 303 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKTLKTPSLTVFL 349
[95][TOP]
>UniRef100_B4E3V7 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4E3V7_HUMAN
Length = 1935
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1002 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1061
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1062 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1108
[96][TOP]
>UniRef100_A6NN93 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=A6NN93_HUMAN
Length = 1970
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1037 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1143
[97][TOP]
>UniRef100_P08775 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Mus musculus
RepID=RPB1_MOUSE
Length = 1970
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1037 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1143
[98][TOP]
>UniRef100_P24928 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Euarchontoglires
RepID=RPB1_HUMAN
Length = 1970
Score = 163 bits (412), Expect = 6e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNI LRSTL S+R+ EE++LS EAF+W++GEIES+F Q++ PGEM+G +AAQS+G
Sbjct: 1037 ATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFL 1143
[99][TOP]
>UniRef100_Q6E232 RNA polymersae 2 (Fragment) n=1 Tax=Caenorhabditis sp. PS1010
RepID=Q6E232_9PELO
Length = 601
Score = 162 bits (411), Expect = 8e-39
Identities = 77/107 (71%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL +K++ KL+ EAF+W++GEIESRF+Q++ PGEM+G +AAQS+G
Sbjct: 229 ATLLMNILLRSTLCTKKMCTSSKLNTEAFDWLLGEIESRFMQAIAQPGEMVGALAAQSLG 288
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 289 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVFL 335
[100][TOP]
>UniRef100_A9QMP3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditis brassicae
RepID=A9QMP3_9BILA
Length = 406
Score = 162 bits (411), Expect = 8e-39
Identities = 76/107 (71%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ +YKL+ EAFEW++GE+E+RF Q++ PGEM+G +AAQS+G
Sbjct: 246 ATLLMNILVRSTLCSKKMASKYKLNSEAFEWLLGEVETRFKQAIAQPGEMVGALAAQSLG 305
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K +KTPSL+V+L
Sbjct: 306 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKTLKTPSLTVFL 352
[101][TOP]
>UniRef100_A9QMH3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditis sp. PS1130
RepID=A9QMH3_9BILA
Length = 619
Score = 162 bits (411), Expect = 8e-39
Identities = 76/107 (71%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ +YKL+ EAFEW++GE+E+RF Q++ PGEM+G +AAQS+G
Sbjct: 238 ATLLMNILVRSTLCSKKMASKYKLNSEAFEWLLGEVETRFKQAIAQPGEMVGALAAQSLG 297
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K +KTPSL+V+L
Sbjct: 298 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKTLKTPSLTVFL 344
[102][TOP]
>UniRef100_A9QME1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditis brassicae
RepID=A9QME1_9BILA
Length = 628
Score = 162 bits (411), Expect = 8e-39
Identities = 76/107 (71%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ +YKL+ EAFEW++GE+E+RF Q++ PGEM+G +AAQS+G
Sbjct: 239 ATLLMNILVRSTLCSKKMASKYKLNSEAFEWLLGEVETRFKQAIAQPGEMVGALAAQSLG 298
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K +KTPSL+V+L
Sbjct: 299 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKTLKTPSLTVFL 345
[103][TOP]
>UniRef100_C4R4Y0 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R4Y0_PICPG
Length = 1743
Score = 162 bits (411), Expect = 8e-39
Identities = 77/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT F L+R+ LA++R+LEE++L+R+AFEWV+G IE++F +SLV PGEM+G +AAQSIG
Sbjct: 1016 ATSLFQCLVRARLATRRILEEFRLNRDAFEWVLGTIEAQFQRSLVHPGEMVGVIAAQSIG 1075
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EI+NVAK IKTP+L+VYL
Sbjct: 1076 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPALTVYL 1122
[104][TOP]
>UniRef100_Q6E223 RNA polymerase 2 (Fragment) n=1 Tax=Caenorhabditis sp. DF5070
RepID=Q6E223_9PELO
Length = 606
Score = 162 bits (410), Expect = 1e-38
Identities = 76/107 (71%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL +K++ KL+ EAF+W++GE+ESRF+Q++ PGEM+G +AAQS+G
Sbjct: 229 ATLLMNILLRSTLCTKKLCTSSKLNTEAFDWLLGEVESRFMQAIAQPGEMVGALAAQSLG 288
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 289 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVFL 335
[105][TOP]
>UniRef100_B7PJA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
RepID=B7PJA3_IXOSC
Length = 1937
Score = 162 bits (410), Expect = 1e-38
Identities = 79/107 (73%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F LLR+TL SKRV EE++LS E+FEW++GEIE+RF QS PGEM+G +AAQS+G
Sbjct: 1037 ATLLFRSLLRATLCSKRVAEEFRLSTESFEWLLGEIETRFHQSQGQPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIIN++K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINISKKPKTPSLTVFL 1143
[106][TOP]
>UniRef100_Q6JU33 RNA polymerase II largest subunit (Fragment) n=1 Tax=Limnadia
lenticularis RepID=Q6JU33_9CRUS
Length = 256
Score = 162 bits (409), Expect = 1e-38
Identities = 77/107 (71%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+R+TL +KRV EEY+LS EAFEW+IGEIE+RFLQ+ PGEM+G +AAQS+G
Sbjct: 45 ATLLFQTLVRATLCTKRVAEEYRLSSEAFEWLIGEIETRFLQAQAPPGEMVGALAAQSLG 104
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 105 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 151
[107][TOP]
>UniRef100_A9QMP7 RNA polymerase 2 (Fragment) n=1 Tax=Rhabditoides inermis
RepID=A9QMP7_9BILA
Length = 440
Score = 162 bits (409), Expect = 1e-38
Identities = 77/107 (71%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ E YKL+ EAFEW++GE+E+RF Q++ PGEM+G +AAQS+G
Sbjct: 201 ATLLMNILVRSTLCSKKMAEHYKLNSEAFEWLLGEVETRFQQAIAQPGEMVGPLAAQSLG 260
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 261 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKQPKTPSLTVFL 307
[108][TOP]
>UniRef100_A9QMF5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditoides inermis
RepID=A9QMF5_9BILA
Length = 630
Score = 162 bits (409), Expect = 1e-38
Identities = 77/107 (71%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ E YKL+ EAFEW++GE+E+RF Q++ PGEM+G +AAQS+G
Sbjct: 238 ATLLMNILVRSTLCSKKMAEHYKLNSEAFEWLLGEVETRFQQAIAQPGEMVGPLAAQSLG 297
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 298 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKQPKTPSLTVFL 344
[109][TOP]
>UniRef100_P90678 DNA-directed RNA polymerase (Fragment) n=1 Tax=Aduncospiculum
halicti RepID=P90678_9BILA
Length = 631
Score = 161 bits (408), Expect = 2e-38
Identities = 77/107 (71%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL +K + E++KL+ EAFEW++GEIE+RF Q++ PGEM+G +AAQS+G
Sbjct: 242 ATLLMNILVRSTLCAKAMAEKHKLNAEAFEWLLGEIETRFQQAIAQPGEMVGALAAQSLG 301
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 302 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 348
[110][TOP]
>UniRef100_O01375 DNA-directed RNA polymerase (Fragment) n=1 Tax=Teratorhabditis
palmarum RepID=O01375_9BILA
Length = 631
Score = 161 bits (408), Expect = 2e-38
Identities = 77/107 (71%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SKRV +KL+ EAF+W++GEIE RF Q++ PGEM+G +AAQS+G
Sbjct: 242 ATLLMNILIRSTLCSKRVASMHKLNNEAFDWLLGEIEHRFKQAIAQPGEMVGALAAQSLG 301
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K+ KTPSL++YL
Sbjct: 302 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTIYL 348
[111][TOP]
>UniRef100_A9UEE2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cephaloboides cf.
armata SB363 RepID=A9UEE2_9BILA
Length = 475
Score = 161 bits (408), Expect = 2e-38
Identities = 76/107 (71%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ +KL+ EAFEW++GEIE+RF Q++ PGEM+G +AAQS+G
Sbjct: 236 ATLLMNILIRSTLCSKKMASTHKLNSEAFEWLLGEIETRFKQAIAQPGEMVGALAAQSLG 295
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 296 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVFL 342
[112][TOP]
>UniRef100_A9QMF6 RNA polymerase 2 (Fragment) n=1 Tax=Pristionchus pacificus
RepID=A9QMF6_PRIPA
Length = 583
Score = 161 bits (408), Expect = 2e-38
Identities = 76/107 (71%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ E+++L+ EAFEW++GEIE+RF Q++ PGEM+G +AAQS+G
Sbjct: 209 ATLLMNILVRSTLCSKQLAEKHRLNSEAFEWLLGEIETRFQQAIAQPGEMVGALAAQSLG 268
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIIN++K+ KTPSL+VYL
Sbjct: 269 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINISKQPKTPSLTVYL 315
[113][TOP]
>UniRef100_Q6JU03 RNA polymerase II largest subunit (Fragment) n=1 Tax=Podura
aquatica RepID=Q6JU03_9HEXA
Length = 306
Score = 161 bits (407), Expect = 2e-38
Identities = 77/107 (71%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL S+RV EE++L+ EAFEW+IGEIE+RF Q+LV PGEM+G +AAQS+G
Sbjct: 45 ATLLFQCLVRSTLCSRRVAEEFRLTTEAFEWLIGEIETRFQQALVQPGEMVGALAAQSLG 104
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVT GVPRL+EIIN++KR K PSL+V+L
Sbjct: 105 EPATQMTLNTFHFAGVSSKNVTXGVPRLKEIINISKRPKAPSLTVFL 151
[114][TOP]
>UniRef100_Q6E227 RNA polymerase 2 (Fragment) n=1 Tax=Caenorhabditis japonica
RepID=Q6E227_CAEJA
Length = 608
Score = 161 bits (407), Expect = 2e-38
Identities = 77/107 (71%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL +K++ KL+ EAF+W++GEIE+RF Q++ PGEM+G +AAQS+G
Sbjct: 229 ATLLMNILLRSTLCTKKMCTTAKLNTEAFDWLLGEIETRFQQAIAQPGEMVGALAAQSLG 288
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+VYL
Sbjct: 289 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVYL 335
[115][TOP]
>UniRef100_Q6E224 DNA-directed RNA polymerase (Fragment) n=1 Tax=Caenorhabditis
drosophilae RepID=Q6E224_9PELO
Length = 633
Score = 161 bits (407), Expect = 2e-38
Identities = 76/107 (71%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL +K++ KL+ EAF+W++GE+ESRF+Q++ PGEM+G +AAQS+G
Sbjct: 245 ATLLMNILLRSTLCTKKLCTSSKLNTEAFDWLLGEVESRFMQAIAQPGEMVGALAAQSLG 304
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPA QMTLNTFHYAGVSAKNVTLGVPRL+EIINVAK++KTPSL+V+L
Sbjct: 305 EPAPQMTLNTFHYAGVSAKNVTLGVPRLKEIINVAKQLKTPSLTVFL 351
[116][TOP]
>UniRef100_O01370 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mesorhabditis sp.
RepID=O01370_9BILA
Length = 633
Score = 161 bits (407), Expect = 2e-38
Identities = 77/107 (71%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL SK++ E+Y+L++E FEW++GEIE RF Q++ PGEM+G +AAQS+G
Sbjct: 242 ATLLMNILLRSTLCSKQMAEKYRLNQEGFEWLLGEIEHRFQQAIAQPGEMVGALAAQSLG 301
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K KTPSL+V+L
Sbjct: 302 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKSPKTPSLTVFL 348
[117][TOP]
>UniRef100_A9QMG0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Oscheius tipulae
RepID=A9QMG0_OSCTI
Length = 629
Score = 161 bits (407), Expect = 2e-38
Identities = 76/107 (71%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL SK++ +KL++EAF+W++GEIE+RF ++ PGEM+G +AAQS+G
Sbjct: 246 ATLLMNILLRSTLCSKKMATTHKLNQEAFDWLLGEIETRFKSAIAQPGEMVGALAAQSLG 305
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 306 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVFL 352
[118][TOP]
>UniRef100_A9QME4 RNA polymerase 2 (Fragment) n=1 Tax=Oscheius tipulae
RepID=A9QME4_OSCTI
Length = 446
Score = 161 bits (407), Expect = 2e-38
Identities = 76/107 (71%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL SK++ +KL++EAF+W++GEIE+RF ++ PGEM+G +AAQS+G
Sbjct: 68 ATLLMNILLRSTLCSKKMATTHKLNQEAFDWLLGEIETRFKSAIAQPGEMVGALAAQSLG 127
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 128 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVFL 174
[119][TOP]
>UniRef100_A9QME2 RNA polymerase 2 (Fragment) n=1 Tax=Rhabditis blumi
RepID=A9QME2_9BILA
Length = 151
Score = 161 bits (407), Expect = 2e-38
Identities = 76/107 (71%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL S+++ ++KL+ EAFEW++GE+E+RF Q++ PGEM+G +AAQS+G
Sbjct: 1 ATLLMNILLRSTLCSRKMAFQHKLNAEAFEWLLGEVETRFKQAIAQPGEMVGALAAQSLG 60
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL V+L
Sbjct: 61 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLVVFL 107
[120][TOP]
>UniRef100_UPI00019270E9 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 2 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270E9
Length = 2014
Score = 160 bits (406), Expect = 3e-38
Identities = 77/107 (71%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ F I LRSTL SKRV+EE++L+ EAF+W++GE+ESRF + PGEM+G +AAQS+G
Sbjct: 1037 ATMLFQIHLRSTLCSKRVIEEFRLTSEAFDWLLGEVESRFNLAQAQPGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 1097 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 1143
[121][TOP]
>UniRef100_UPI00019270BB PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 1 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270BB
Length = 2041
Score = 160 bits (406), Expect = 3e-38
Identities = 77/107 (71%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ F I LRSTL SKRV+EE++L+ EAF+W++GE+ESRF + PGEM+G +AAQS+G
Sbjct: 1038 ATMLFQIHLRSTLCSKRVIEEFRLTSEAFDWLLGEVESRFNLAQAQPGEMVGALAAQSLG 1097
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 1098 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 1144
[122][TOP]
>UniRef100_Q6E233 RNA polymerase 2 (Fragment) n=1 Tax=Caenorhabditis remanei
RepID=Q6E233_CAERE
Length = 611
Score = 160 bits (406), Expect = 3e-38
Identities = 76/107 (71%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL +K++ KL+ EAF+W++GE+ESRF Q++ PGEM+G +AAQS+G
Sbjct: 229 ATLLMNILLRSTLCTKKMCTSAKLNTEAFDWLLGEVESRFQQAIAQPGEMVGALAAQSLG 288
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 289 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVFL 335
[123][TOP]
>UniRef100_O01376 DNA-directed RNA polymerase (Fragment) n=1 Tax=unidentified
nematode RepID=O01376_9BILA
Length = 633
Score = 160 bits (406), Expect = 3e-38
Identities = 76/107 (71%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRS L +K++ KL+ EAF+W++GEIESRF+Q++ PGEM+G +AAQS+G
Sbjct: 242 ATLLMNILLRSALCTKKMCTSSKLNTEAFDWLLGEIESRFMQAIAQPGEMVGALAAQSLG 301
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 302 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVFL 348
[124][TOP]
>UniRef100_A9QMT0 RNA polymerase 2 (Fragment) n=1 Tax=Protorhabditis sp. JB122
RepID=A9QMT0_9BILA
Length = 271
Score = 160 bits (406), Expect = 3e-38
Identities = 77/107 (71%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL SK++ YKL EAFEW++GE+E RF ++ PGEM+G +AAQS+G
Sbjct: 38 ATLLMNILLRSTLCSKKMGMSYKLDSEAFEWLLGEVEQRFNSAIAQPGEMVGALAAQSLG 97
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 98 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVFL 144
[125][TOP]
>UniRef100_A9QMG1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Oscheius
dolichuroides RepID=A9QMG1_9BILA
Length = 629
Score = 160 bits (406), Expect = 3e-38
Identities = 76/107 (71%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL +K++ +KL++EAFEW++GEIE+RF ++ PGEM+G +AAQS+G
Sbjct: 249 ATLLMNILLRSTLCAKKMATTHKLNQEAFEWLLGEIETRFKAAIAQPGEMVGALAAQSLG 308
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 309 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVFL 355
[126][TOP]
>UniRef100_A9QME5 RNA polymerase 2 (Fragment) n=1 Tax=Oscheius dolichura
RepID=A9QME5_9BILA
Length = 371
Score = 160 bits (406), Expect = 3e-38
Identities = 76/107 (71%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL +K++ +KL++EAFEW++GEIE+RF ++ PGEM+G +AAQS+G
Sbjct: 1 ATLLMNILLRSTLCAKKMASTHKLNQEAFEWLLGEIETRFKAAVAQPGEMVGALAAQSLG 60
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 61 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVFL 107
[127][TOP]
>UniRef100_Q9NJN1 RNA polymerase II largest subunit (Fragment) n=1 Tax=Semibalanus
balanoides RepID=Q9NJN1_SEMBA
Length = 256
Score = 160 bits (405), Expect = 4e-38
Identities = 75/107 (70%), Positives = 97/107 (90%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ F+ L+RSTL ++RV EEY+LS EAFEW+IGEI++RF Q++V PGEM+G +AAQS+G
Sbjct: 45 ATILFSCLVRSTLCTRRVAEEYRLSSEAFEWLIGEIDTRFHQAMVNPGEMVGALAAQSLG 104
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 105 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 151
[128][TOP]
>UniRef100_A9QMR5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditoides
inermiformis RepID=A9QMR5_9BILA
Length = 524
Score = 160 bits (405), Expect = 4e-38
Identities = 75/107 (70%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ ++Y+L+ +AFEW++GE+E+RF Q++ PGEM+G +AAQS+G
Sbjct: 236 ATLLMNILVRSTLCSKQMADKYRLNAQAFEWLLGEVETRFQQAIAQPGEMVGALAAQSLG 295
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K KTPSL+V+L
Sbjct: 296 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKSPKTPSLTVFL 342
[129][TOP]
>UniRef100_A9QMF4 RNA polymerase 2 (Fragment) n=1 Tax=Rhabditoides inermiformis
RepID=A9QMF4_9BILA
Length = 597
Score = 160 bits (405), Expect = 4e-38
Identities = 75/107 (70%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ ++Y+L+ +AFEW++GE+E+RF Q++ PGEM+G +AAQS+G
Sbjct: 204 ATLLMNILVRSTLCSKQMADKYRLNAQAFEWLLGEVETRFQQAIAQPGEMVGALAAQSLG 263
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K KTPSL+V+L
Sbjct: 264 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKSPKTPSLTVFL 310
[130][TOP]
>UniRef100_B0DB45 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0DB45_LACBS
Length = 1742
Score = 160 bits (405), Expect = 4e-38
Identities = 79/107 (73%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F + LR+T AS+RVLE++ L+REAF+WV+GE+E++F QS+V PGEM G +AAQSIG
Sbjct: 1021 ATLTFRMHLRATFASRRVLEKFHLTREAFDWVMGEVETKFNQSVVHPGEMCGTLAAQSIG 1080
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EIINVA IKTPSL+V+L
Sbjct: 1081 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINVATNIKTPSLTVHL 1127
[131][TOP]
>UniRef100_Q6GYH6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Prodontorhabditis
wirthi RepID=Q6GYH6_9BILA
Length = 630
Score = 160 bits (404), Expect = 5e-38
Identities = 76/107 (71%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ YKL EAF+W++GEIE+RF ++ PGEM+G +AAQS+G
Sbjct: 248 ATLLTNILIRSTLCSKKMASTYKLDSEAFDWLLGEIENRFQSAIAQPGEMVGALAAQSLG 307
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K +KTPSL+V+L
Sbjct: 308 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKTLKTPSLTVFL 354
[132][TOP]
>UniRef100_Q6E231 RNA polymerase 2 (Fragment) n=1 Tax=Caenorhabditis brenneri
RepID=Q6E231_CAEBE
Length = 596
Score = 160 bits (404), Expect = 5e-38
Identities = 76/107 (71%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL +K++ KL+ EAF+W++GEIE+RF Q++ PGEM+G +AAQS+G
Sbjct: 221 ATLLMNILLRSTLCTKKMCTSAKLNTEAFDWLLGEIETRFQQAIAQPGEMVGALAAQSLG 280
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 281 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVFL 327
[133][TOP]
>UniRef100_A9UEE0 RNA polymerase 2 largest subunit (Fragment) n=1 Tax=Diploscapter
sp. JU359 RepID=A9UEE0_9BILA
Length = 284
Score = 160 bits (404), Expect = 5e-38
Identities = 77/107 (71%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL ILLRSTL SK++ YKL EAFEW++GE+E RF Q++ PGEM+G +AAQS+G
Sbjct: 38 ATLLMXILLRSTLCSKKMGMAYKLDSEAFEWLLGEVEQRFNQAIAQPGEMVGALAAQSLG 97
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 98 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKLKTPSLTVFL 144
[134][TOP]
>UniRef100_A9QMT2 RNA polymerase 2 (Fragment) n=1 Tax=Pellioditis typica
RepID=A9QMT2_9PELO
Length = 488
Score = 160 bits (404), Expect = 5e-38
Identities = 74/107 (69%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ Y+L+ EAFEW++GE+E+RF Q++ PGEM+G +AAQS+G
Sbjct: 228 ATLLMNILIRSTLCSKKMASTYRLNSEAFEWMLGEVETRFKQAIAQPGEMVGALAAQSLG 287
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K++KTPSL+ +L
Sbjct: 288 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTCFL 334
[135][TOP]
>UniRef100_A9QMQ7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phasmarhabditis sp.
EM434 RepID=A9QMQ7_9BILA
Length = 398
Score = 160 bits (404), Expect = 5e-38
Identities = 74/107 (69%), Positives = 96/107 (89%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ ++L+ EAFEW++GE+E+RF Q++ PGEM+G +AAQS+G
Sbjct: 246 ATLLMNILIRSTLCSKKMATSHRLNSEAFEWLLGEVETRFKQAIAQPGEMVGALAAQSLG 305
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 306 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVFL 352
[136][TOP]
>UniRef100_A9QME0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pellioditis typica
RepID=A9QME0_9PELO
Length = 633
Score = 160 bits (404), Expect = 5e-38
Identities = 74/107 (69%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ Y+L+ EAFEW++GE+E+RF Q++ PGEM+G +AAQS+G
Sbjct: 242 ATLLMNILIRSTLCSKKMASTYRLNSEAFEWMLGEVETRFKQAIAQPGEMVGALAAQSLG 301
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K++KTPSL+ +L
Sbjct: 302 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTCFL 348
[137][TOP]
>UniRef100_P16356 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
elegans RepID=RPB1_CAEEL
Length = 1852
Score = 160 bits (404), Expect = 5e-38
Identities = 77/107 (71%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL +K + + KL+ EAF+W++GEIESRF Q++ PGEM+G +AAQS+G
Sbjct: 1027 ATLLMNILLRSTLCTKNMCTKSKLNSEAFDWLLGEIESRFQQAIAQPGEMVGALAAQSLG 1086
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K +KTPSL+V+L
Sbjct: 1087 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKTLKTPSLTVFL 1133
[138][TOP]
>UniRef100_P35074 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
briggsae RepID=RPB1_CAEBR
Length = 1853
Score = 160 bits (404), Expect = 5e-38
Identities = 76/107 (71%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL +K++ KL+ EAF+W++GEIE+RF Q++ PGEM+G +AAQS+G
Sbjct: 1031 ATLLMNILLRSTLCTKKMCTSAKLNTEAFDWLLGEIETRFQQAIAQPGEMVGALAAQSLG 1090
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 1091 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVFL 1137
[139][TOP]
>UniRef100_O00820 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba
castellanii RepID=O00820_ACACA
Length = 1569
Score = 159 bits (403), Expect = 7e-38
Identities = 78/107 (72%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
A L F+ILLR TLAS+RVL+EY+L + +++W++GEI RF +SL PGEMIG +AAQSIG
Sbjct: 944 AILLFSILLRFTLASRRVLQEYRLDQISWDWLLGEITDRFYKSLCDPGEMIGALAAQSIG 1003
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+E+IN+AK IKTPSL+VYL
Sbjct: 1004 EPATQMTLNTFHFAGVSAKNVTLGVPRLKELINIAKTIKTPSLTVYL 1050
[140][TOP]
>UniRef100_A9QMQ4 RNA polymerase 2 (Fragment) n=1 Tax=Choriorhabditis dudichi
RepID=A9QMQ4_9BILA
Length = 380
Score = 159 bits (403), Expect = 7e-38
Identities = 75/107 (70%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ +KL+ EAFEW++GE+E+RF Q++ PGEM+G +AAQS+G
Sbjct: 5 ATLLMNILIRSTLCSKKMATTHKLNAEAFEWLLGEVETRFQQAIAQPGEMVGALAAQSLG 64
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K +KTPSL+ +L
Sbjct: 65 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKTLKTPSLTCFL 111
[141][TOP]
>UniRef100_Q6E226 DNA-directed RNA polymerase (Fragment) n=1 Tax=Caenorhabditis
plicata RepID=Q6E226_9PELO
Length = 636
Score = 159 bits (402), Expect = 9e-38
Identities = 76/107 (71%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL SK++ KL+ EAF+W++GE+ESRF Q++ PGEM+G +AAQS+G
Sbjct: 246 ATLLMNILLRSTLCSKKLCTTSKLNTEAFDWLLGEVESRFNQAIAQPGEMVGALAAQSLG 305
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+ +L
Sbjct: 306 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTCFL 352
[142][TOP]
>UniRef100_Q25203 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ilyanassa obsoleta
RepID=Q25203_9CAEN
Length = 1343
Score = 159 bits (402), Expect = 9e-38
Identities = 76/107 (71%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL L+RSTL +KRV EE++LS +AF W++GEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 951 ATLLMKCLIRSTLCAKRVAEEHRLSEDAFNWLLGEIETRFQQAQAHPGEMVGALAAQSLG 1010
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIIN++K+ KTPSL+VYL
Sbjct: 1011 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINISKKPKTPSLTVYL 1057
[143][TOP]
>UniRef100_B8BQ02 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BQ02_THAPS
Length = 1627
Score = 159 bits (401), Expect = 1e-37
Identities = 79/107 (73%), Positives = 91/107 (85%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT + IL+RS LASKRVL EY+LS A WV+GEIE+RF + V+PGEM G +AAQSIG
Sbjct: 1033 ATTLYRILIRSYLASKRVLREYRLSEAALIWVLGEIEARFHHAKVSPGEMAGVLAAQSIG 1092
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINVAK +KTP L++YL
Sbjct: 1093 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVAKTVKTPGLTIYL 1139
[144][TOP]
>UniRef100_A9QMH2 RNA polymerase 2 (Fragment) n=1 Tax=Brevibucca saprophaga
RepID=A9QMH2_9BILA
Length = 386
Score = 159 bits (401), Expect = 1e-37
Identities = 76/102 (74%), Positives = 93/102 (91%)
Frame = +3
Query: 18 NILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQ 197
NILLRSTL SK+V E++KL+ EAFEW++GEIE++F Q++ PGEM+G +AAQS+GEPATQ
Sbjct: 1 NILLRSTLCSKKVAEKHKLNTEAFEWLLGEIETKFNQAIAQPGEMVGALAAQSLGEPATQ 60
Query: 198 MTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
MTLNTFHYAGVSAKNVTLGVPRL+EIINV+K KTPSL+V+L
Sbjct: 61 MTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNPKTPSLTVFL 102
[145][TOP]
>UniRef100_A8BDP3 RNA polymerase II largest subunit (Fragment) n=1 Tax=Priapulus
caudatus RepID=A8BDP3_PRICU
Length = 434
Score = 159 bits (401), Expect = 1e-37
Identities = 77/107 (71%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL N +LRSTL +KRV EEYKL+ E+FEW++GE+ESRF + PGEM+G +AAQS+G
Sbjct: 177 ATLNINAMLRSTLCTKRVAEEYKLTTESFEWLLGEVESRFQHAQAQPGEMVGPLAAQSLG 236
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLG PRL+EIINV+K+ KTPSL+V+L
Sbjct: 237 EPATQMTLNTFHYAGVSAKNVTLGXPRLKEIINVSKKPKTPSLTVFL 283
[146][TOP]
>UniRef100_UPI000051A77E PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
isoform 2 n=1 Tax=Apis mellifera RepID=UPI000051A77E
Length = 1422
Score = 158 bits (399), Expect = 2e-37
Identities = 76/107 (71%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ V+PGEM+G +AAQS+G
Sbjct: 1029 ATLLFQCLVRSTLCTKCVSEEFRLSSEAFEWLIGEIETRFQQAQVSPGEMVGALAAQSLG 1088
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1089 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1135
[147][TOP]
>UniRef100_B4YVX3 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
hapla RepID=B4YVX3_MELHA
Length = 219
Score = 158 bits (399), Expect = 2e-37
Identities = 75/107 (70%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ +++KL+ EAFEW++GEIE+RF ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSMLCSLKMAKQHKLNEEAFEWLLGEIETRFCTAIVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 116
[148][TOP]
>UniRef100_B4YVX2 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
hapla RepID=B4YVX2_MELHA
Length = 219
Score = 158 bits (399), Expect = 2e-37
Identities = 75/107 (70%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ +++KL+ EAFEW++GEIE+RF ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSMLCSLKMAKQHKLNEEAFEWLLGEIETRFCTAIVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 116
[149][TOP]
>UniRef100_B4YVW9 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
hapla RepID=B4YVW9_MELHA
Length = 219
Score = 158 bits (399), Expect = 2e-37
Identities = 75/107 (70%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ +++KL+ EAFEW++GEIE+RF ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSMLCSLKMAKQHKLNEEAFEWLLGEIETRFCTAIVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 116
[150][TOP]
>UniRef100_B4YVW7 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
hapla RepID=B4YVW7_MELHA
Length = 219
Score = 158 bits (399), Expect = 2e-37
Identities = 75/107 (70%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ +++KL+ EAFEW++GEIE+RF ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSMLCSLKMAKQHKLNEEAFEWLLGEIETRFCTAIVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 116
[151][TOP]
>UniRef100_B4YVW2 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
mayaguensis RepID=B4YVW2_MELMY
Length = 219
Score = 158 bits (399), Expect = 2e-37
Identities = 75/107 (70%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ +++KL+ EAFEW++GEIE+RF ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSMLCSLKMAKQHKLNEEAFEWLLGEIETRFCTAIVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 116
[152][TOP]
>UniRef100_B4YVU7 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
javanica RepID=B4YVU7_MELJA
Length = 219
Score = 158 bits (399), Expect = 2e-37
Identities = 75/107 (70%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ +++KL+ EAFEW++GEIE+RF ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSMLCSLKMAKQHKLNEEAFEWLLGEIETRFCTAIVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 116
[153][TOP]
>UniRef100_B4YVU6 RNA polymerase II large subunit (Fragment) n=2 Tax=Meloidogyne
incognita group RepID=B4YVU6_MELAR
Length = 219
Score = 158 bits (399), Expect = 2e-37
Identities = 75/107 (70%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ +++KL+ EAFEW++GEIE+RF ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSMLCSLKMAKQHKLNEEAFEWLLGEIETRFCTAIVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 116
[154][TOP]
>UniRef100_B4YVU3 RNA polymerase II large subunit (Fragment) n=5 Tax=Meloidogyne
RepID=B4YVU3_MELAR
Length = 219
Score = 158 bits (399), Expect = 2e-37
Identities = 75/107 (70%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ +++KL+ EAFEW++GEIE+RF ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSMLCSLKMAKQHKLNEEAFEWLLGEIETRFCTAIVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 116
[155][TOP]
>UniRef100_A9QMQ9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Caenorhabditis sp.
JU727 RepID=A9QMQ9_9PELO
Length = 620
Score = 158 bits (399), Expect = 2e-37
Identities = 75/107 (70%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL +K++ KL+ EAF+W++GEIE+RF ++ PGEM+G +AAQS+G
Sbjct: 246 ATLLMNILLRSTLCTKKMCTSAKLNTEAFDWLLGEIETRFQSAIAQPGEMVGALAAQSLG 305
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 306 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVFL 352
[156][TOP]
>UniRef100_A9QMF1 RNA polymerase 2 (Fragment) n=1 Tax=Pelodera punctata
RepID=A9QMF1_9PELO
Length = 605
Score = 158 bits (399), Expect = 2e-37
Identities = 75/107 (70%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ E+Y+L+ E FEW++GEIE RF Q++ PGEM+G +AAQS+G
Sbjct: 223 ATLLMNILIRSTLCSKQMAEKYRLNEEGFEWLLGEIEHRFNQAVAQPGEMVGALAAQSLG 282
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K +TPSL+V+L
Sbjct: 283 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKSPRTPSLTVFL 329
[157][TOP]
>UniRef100_Q6JU18 RNA polymerase II largest subunit (Fragment) n=1 Tax=Mesocyclops
edax RepID=Q6JU18_9MAXI
Length = 302
Score = 157 bits (398), Expect = 3e-37
Identities = 74/107 (69%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT F L+RSTL SK V E+++LS EAFEW++GEIES+F+Q+ PGEM+G +AAQSIG
Sbjct: 45 ATTLFQCLVRSTLCSKLVAEQFRLSEEAFEWLLGEIESKFMQAQATPGEMVGAIAAQSIG 104
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 105 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 151
[158][TOP]
>UniRef100_A9UED6 RNA polymerase 2 largest subunit (Fragment) n=1 Tax=Diploscapter
sp. JU359 RepID=A9UED6_9BILA
Length = 374
Score = 157 bits (398), Expect = 3e-37
Identities = 75/102 (73%), Positives = 91/102 (89%)
Frame = +3
Query: 18 NILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQ 197
NILLRSTL SK++ YKL EAFEW++GE+E RF Q++ PGEM+G +AAQS+GEPATQ
Sbjct: 2 NILLRSTLCSKKMGMAYKLDSEAFEWLLGEVEQRFNQAIAQPGEMVGALAAQSLGEPATQ 61
Query: 198 MTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
MTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 62 MTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKLKTPSLTVFL 103
[159][TOP]
>UniRef100_A9QMG4 RNA polymerase 2 (Fragment) n=1 Tax=Pelodera strongyloides
dermatitica RepID=A9QMG4_9PELO
Length = 478
Score = 157 bits (398), Expect = 3e-37
Identities = 75/107 (70%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ E+++L+ E FEW++GEIE RF Q++ PGEM+G +AAQS+G
Sbjct: 228 ATLLMNILIRSTLCSKQMAEKHRLNEEGFEWLLGEIEHRFNQAIAQPGEMVGALAAQSLG 287
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K KTPSL+V+L
Sbjct: 288 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKSPKTPSLTVFL 334
[160][TOP]
>UniRef100_A9QMF0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pelodera
strongyloides dermatitica RepID=A9QMF0_9PELO
Length = 633
Score = 157 bits (398), Expect = 3e-37
Identities = 75/107 (70%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ E+++L+ E FEW++GEIE RF Q++ PGEM+G +AAQS+G
Sbjct: 247 ATLLMNILIRSTLCSKQMAEKHRLNEEGFEWLLGEIEHRFNQAIAQPGEMVGALAAQSLG 306
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K KTPSL+V+L
Sbjct: 307 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKSPKTPSLTVFL 353
[161][TOP]
>UniRef100_Q9BNA4 RNA polymerase II largest subunit (Fragment) n=1 Tax=solifugid
'Sol' RepID=Q9BNA4_9ARAC
Length = 256
Score = 157 bits (397), Expect = 4e-37
Identities = 76/107 (71%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F LLRSTL +KRV EE++LS EAF+W++ EIE++F Q+ PGEM+G +AAQS+G
Sbjct: 45 ATLLFRALLRSTLCAKRVSEEFRLSTEAFDWLLEEIETKFQQAQGQPGEMVGALAAQSLG 104
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIIN++K+ KTPSL+V+L
Sbjct: 105 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINISKKPKTPSLTVFL 151
[162][TOP]
>UniRef100_A9QMS1 RNA polymerase 2 (Fragment) n=1 Tax=Rhabditoides regina
RepID=A9QMS1_9BILA
Length = 426
Score = 157 bits (397), Expect = 4e-37
Identities = 75/107 (70%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ E++KL+ E FEW++GEIE+RF ++ PGEM+G +AAQS+G
Sbjct: 38 ATLLMNILIRSTLCSKQMAEKHKLNEEGFEWLLGEIETRFQLAIAQPGEMVGALAAQSLG 97
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K KTPSL+V+L
Sbjct: 98 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKSPKTPSLTVFL 144
[163][TOP]
>UniRef100_A9QMF3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditoides regina
RepID=A9QMF3_9BILA
Length = 626
Score = 157 bits (397), Expect = 4e-37
Identities = 75/107 (70%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ E++KL+ E FEW++GEIE+RF ++ PGEM+G +AAQS+G
Sbjct: 242 ATLLMNILIRSTLCSKQMAEKHKLNEEGFEWLLGEIETRFQLAIAQPGEMVGALAAQSLG 301
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K KTPSL+V+L
Sbjct: 302 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKSPKTPSLTVFL 348
[164][TOP]
>UniRef100_UPI000187E3DF hypothetical protein MPER_04443 n=1 Tax=Moniliophthora perniciosa
FA553 RepID=UPI000187E3DF
Length = 343
Score = 157 bits (396), Expect = 5e-37
Identities = 79/104 (75%), Positives = 92/104 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F + LR+T AS+RVLE++ L+REAFEWV+GE+ES+F QSLV PGEM G +AAQSIG
Sbjct: 222 ATLRFRMHLRATFASRRVLEKFHLNREAFEWVLGEVESKFNQSLVNPGEMCGTLAAQSIG 281
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLS 314
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EII VA IKTPS+S
Sbjct: 282 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEIIYVATHIKTPSVS 325
[165][TOP]
>UniRef100_UPI0000D5670C PREDICTED: similar to GA13798-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D5670C
Length = 2007
Score = 157 bits (396), Expect = 5e-37
Identities = 76/107 (71%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ V PGEM+G +AAQS+G
Sbjct: 1033 ATLLFQCLVRSTLCTKCVSEEFRLSTEAFEWLIGEIETRFQQAQVNPGEMVGALAAQSLG 1092
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1093 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1139
[166][TOP]
>UniRef100_Q9NJL5 RNA polymerase II largest subunit (Fragment) n=1 Tax=Metajapyx
subterraneus RepID=Q9NJL5_9HEXA
Length = 256
Score = 157 bits (396), Expect = 5e-37
Identities = 74/107 (69%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL ++RV E++LS EAFEW+IGE+E+RF Q+ V PGEM+G +AAQS+G
Sbjct: 45 ATLLFQCLVRSTLCTRRVAXEFRLSSEAFEWLIGEVETRFQQAQVXPGEMVGALAAQSLG 104
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 105 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 151
[167][TOP]
>UniRef100_A8N128 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130
RepID=A8N128_COPC7
Length = 1642
Score = 157 bits (396), Expect = 5e-37
Identities = 74/107 (69%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
+TL F + LR+T A+++V+E+ +L+REAFEW++GEIE++F QS+ PGEM G +AAQSIG
Sbjct: 968 STLLFRMHLRATFAARKVIEQMRLTREAFEWILGEIETKFNQSIAHPGEMCGTLAAQSIG 1027
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EIINVA IKTPSL+++L
Sbjct: 1028 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINVATNIKTPSLTIHL 1074
[168][TOP]
>UniRef100_B4YVX9 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
fallax RepID=B4YVX9_9BILA
Length = 219
Score = 156 bits (395), Expect = 6e-37
Identities = 73/107 (68%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ +++KL+ EAFEW++GE+E+RF ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSALCSLKMAKQHKLNEEAFEWLLGEVETRFCTAVVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ +TPSL+V+L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPRTPSLTVFL 116
[169][TOP]
>UniRef100_B4YVX8 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
chitwoodi RepID=B4YVX8_MELCH
Length = 219
Score = 156 bits (395), Expect = 6e-37
Identities = 73/107 (68%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ +++KL+ EAFEW++GE+E+RF ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSALCSLKMAKQHKLNEEAFEWLLGEVETRFCTAVVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ +TPSL+V+L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPRTPSLTVFL 116
[170][TOP]
>UniRef100_B4YVX6 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
fallax RepID=B4YVX6_9BILA
Length = 219
Score = 156 bits (395), Expect = 6e-37
Identities = 73/107 (68%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ +++KL+ EAFEW++GE+E+RF ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSALCSLKMAKQHKLNEEAFEWLLGEVETRFCTAVVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ +TPSL+V+L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPRTPSLTVFL 116
[171][TOP]
>UniRef100_B4YVX5 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
chitwoodi RepID=B4YVX5_MELCH
Length = 219
Score = 156 bits (395), Expect = 6e-37
Identities = 73/107 (68%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ +++KL+ EAFEW++GE+E+RF ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSALCSLKMAKQHKLNEEAFEWLLGEVETRFCTAVVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ +TPSL+V+L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPRTPSLTVFL 116
[172][TOP]
>UniRef100_B4YVX4 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
chitwoodi RepID=B4YVX4_MELCH
Length = 219
Score = 156 bits (395), Expect = 6e-37
Identities = 73/107 (68%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ +++KL+ EAFEW++GE+E+RF ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSALCSLKMAKQHKLNEEAFEWLLGEVETRFCTAVVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ +TPSL+V+L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPRTPSLTVFL 116
[173][TOP]
>UniRef100_B4YVX0 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
hapla RepID=B4YVX0_MELHA
Length = 219
Score = 156 bits (395), Expect = 6e-37
Identities = 74/107 (69%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ +++KL+ EAFEW++GEIE+RF ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSMLCSLKMAKQHKLNEEAFEWLLGEIETRFCTAIVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+ +L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTAFL 116
[174][TOP]
>UniRef100_B4YVW5 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
mayaguensis RepID=B4YVW5_MELMY
Length = 219
Score = 156 bits (395), Expect = 6e-37
Identities = 74/107 (69%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ +++KL+ EAFEW++GEIE+RF ++ PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSMLCSLKMAKQHKLNEEAFEWLLGEIETRFCTAIAQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 116
[175][TOP]
>UniRef100_B4YVU5 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
arenaria RepID=B4YVU5_MELAR
Length = 219
Score = 156 bits (395), Expect = 6e-37
Identities = 75/107 (70%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ ++ KL+ EAFEW++GEIE+RF ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSMLCSLKMAKQRKLNEEAFEWLLGEIETRFCTAIVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 116
[176][TOP]
>UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MI48_9CHLO
Length = 1694
Score = 156 bits (394), Expect = 8e-37
Identities = 76/107 (71%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
+T+ F L+RSTL++KRV++++KLS AF WV+GE+ESRF +L PG+ IG VAAQSIG
Sbjct: 1018 STILFFALVRSTLSAKRVMKDFKLSPAAFNWVVGEVESRFKMALAPPGDGIGTVAAQSIG 1077
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIIN+AK+IKTPSL+V L
Sbjct: 1078 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINIAKKIKTPSLTVAL 1124
[177][TOP]
>UniRef100_Q9XZU9 DNA-directed RNA polymerase n=1 Tax=Drosophila subobscura
RepID=Q9XZU9_DROSU
Length = 1889
Score = 156 bits (394), Expect = 8e-37
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 1029 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALAAQSLG 1088
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1089 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1135
[178][TOP]
>UniRef100_Q9XZU8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila
pseudoobscura pseudoobscura RepID=Q9XZU8_DROPS
Length = 1811
Score = 156 bits (394), Expect = 8e-37
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 951 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALAAQSLG 1010
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1011 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1057
[179][TOP]
>UniRef100_Q9XZS2 DNA-directed RNA polymerase n=1 Tax=Drosophila madeirensis
RepID=Q9XZS2_DROMD
Length = 1889
Score = 156 bits (394), Expect = 8e-37
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 1029 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALAAQSLG 1088
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1089 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1135
[180][TOP]
>UniRef100_Q9XZS1 DNA-directed RNA polymerase n=1 Tax=Drosophila guanche
RepID=Q9XZS1_DROGU
Length = 1889
Score = 156 bits (394), Expect = 8e-37
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 1029 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALAAQSLG 1088
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1089 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1135
[181][TOP]
>UniRef100_Q9NJN3 RNA polymerase II largest subunit (Fragment) n=1 Tax=Armadillidium
vulgare RepID=Q9NJN3_ARMVU
Length = 433
Score = 156 bits (394), Expect = 8e-37
Identities = 73/107 (68%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F+ L+RSTL +K+V EEY+L+ EAF W++GEIE+RF Q++ PGEM+G +AAQS+G
Sbjct: 194 ATLLFHCLVRSTLCTKKVSEEYRLTTEAFNWLMGEIETRFNQAIANPGEMVGALAAQSLG 253
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 254 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 300
[182][TOP]
>UniRef100_Q7Q3C6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7Q3C6_ANOGA
Length = 1878
Score = 156 bits (394), Expect = 8e-37
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++L+ EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 1027 ATLLFQCLVRSTLCTKYVAEEFRLNNEAFEWLIGEIETRFQQAQCNPGEMVGALAAQSLG 1086
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++KR K PSL+V+L
Sbjct: 1087 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKRPKAPSLTVFL 1133
[183][TOP]
>UniRef100_Q6JU60 DNA-directed RNA polymerase (Fragment) n=1 Tax=Armadillidium
vulgare RepID=Q6JU60_ARMVU
Length = 736
Score = 156 bits (394), Expect = 8e-37
Identities = 73/107 (68%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F+ L+RSTL +K+V EEY+L+ EAF W++GEIE+RF Q++ PGEM+G +AAQS+G
Sbjct: 497 ATLLFHCLVRSTLCTKKVSEEYRLTTEAFNWLMGEIETRFNQAIANPGEMVGALAAQSLG 556
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 557 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 603
[184][TOP]
>UniRef100_Q29IN2 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q29IN2_DROPS
Length = 1889
Score = 156 bits (394), Expect = 8e-37
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 1029 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALAAQSLG 1088
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1089 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1135
[185][TOP]
>UniRef100_Q1WKU4 Putative RNA polymerase II 215 kD subunit (Fragment) n=1
Tax=Drosophila erecta RepID=Q1WKU4_DROER
Length = 760
Score = 156 bits (394), Expect = 8e-37
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 171 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALAAQSLG 230
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 231 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 277
[186][TOP]
>UniRef100_Q1WKU3 Putative RNA polymerase II 215 kD subunit (Fragment) n=1
Tax=Drosophila orena RepID=Q1WKU3_DROOR
Length = 750
Score = 156 bits (394), Expect = 8e-37
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 171 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALAAQSLG 230
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 231 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 277
[187][TOP]
>UniRef100_Q1WKU0 Putative RNA polymerase II 215 kD subunit (Fragment) n=2
Tax=melanogaster subgroup RepID=Q1WKU0_DROYA
Length = 766
Score = 156 bits (394), Expect = 8e-37
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 171 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALAAQSLG 230
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 231 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 277
[188][TOP]
>UniRef100_Q1PQE9 CG1554 (Fragment) n=1 Tax=Drosophila miranda RepID=Q1PQE9_DROMI
Length = 335
Score = 156 bits (394), Expect = 8e-37
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 26 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALAAQSLG 85
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 86 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 132
[189][TOP]
>UniRef100_B4YVU9 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
javanica RepID=B4YVU9_MELJA
Length = 219
Score = 156 bits (394), Expect = 8e-37
Identities = 74/107 (69%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L ++ +++KL+ EAFEW++GEIE+RF ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSMLCPLKMAKQHKLNEEAFEWLLGEIETRFCTAIVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 116
[190][TOP]
>UniRef100_B4PY98 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PY98_DROYA
Length = 1889
Score = 156 bits (394), Expect = 8e-37
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 1029 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALAAQSLG 1088
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1089 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1135
[191][TOP]
>UniRef100_B4MAN9 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4MAN9_DROVI
Length = 1889
Score = 156 bits (394), Expect = 8e-37
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 1029 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALAAQSLG 1088
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1089 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1135
[192][TOP]
>UniRef100_B4L732 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4L732_DROMO
Length = 1889
Score = 156 bits (394), Expect = 8e-37
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 1029 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALAAQSLG 1088
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1089 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1135
[193][TOP]
>UniRef100_B4JXA6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4JXA6_DROGR
Length = 1889
Score = 156 bits (394), Expect = 8e-37
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 1029 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALAAQSLG 1088
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1089 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1135
[194][TOP]
>UniRef100_B4H2R8 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4H2R8_DROPE
Length = 1804
Score = 156 bits (394), Expect = 8e-37
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 1029 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALAAQSLG 1088
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1089 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1135
[195][TOP]
>UniRef100_B3NUC1 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NUC1_DROER
Length = 1889
Score = 156 bits (394), Expect = 8e-37
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 1029 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALAAQSLG 1088
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1089 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1135
[196][TOP]
>UniRef100_B3MQ29 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MQ29_DROAN
Length = 1889
Score = 156 bits (394), Expect = 8e-37
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 1029 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALAAQSLG 1088
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1089 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1135
[197][TOP]
>UniRef100_A9QMS3 RNA polymerase 2 (Fragment) n=1 Tax=Pelodera punctata
RepID=A9QMS3_9PELO
Length = 363
Score = 156 bits (394), Expect = 8e-37
Identities = 74/107 (69%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ E+Y+L+ E FEW++GEIE RF Q++ PGEM+G +A QS+G
Sbjct: 17 ATLLMNILIRSTLCSKQMAEKYRLNEEGFEWLLGEIEHRFNQAVAQPGEMVGALAXQSLG 76
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K +TPSL+V+L
Sbjct: 77 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKSPRTPSLTVFL 123
[198][TOP]
>UniRef100_A9QMF2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pelodera teres
RepID=A9QMF2_9PELO
Length = 629
Score = 156 bits (394), Expect = 8e-37
Identities = 74/107 (69%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ E+++L+ AF+W++GEIE RF Q++V PGEM+G +AAQS+G
Sbjct: 242 ATLLVNILIRSTLCSKQMSEKHRLNESAFDWLLGEIEHRFQQAIVQPGEMVGALAAQSLG 301
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K +TPSL+V+L
Sbjct: 302 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKSPRTPSLTVFL 348
[199][TOP]
>UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1EA31_9CHLO
Length = 1720
Score = 155 bits (393), Expect = 1e-36
Identities = 77/107 (71%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ F L+RSTL++KRV+ E++LS AF WVIGE+ESRF +L PG+ IG VAAQSIG
Sbjct: 1016 ATILFFALVRSTLSAKRVMSEFRLSPAAFNWVIGEVESRFKVALAPPGDGIGTVAAQSIG 1075
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+E+IN+AK+IKTPSL+V L
Sbjct: 1076 EPATQMTLNTFHFAGVSAKNVTLGVPRLKELINIAKKIKTPSLTVAL 1122
[200][TOP]
>UniRef100_Q1WKU2 Putative RNA polymerase II 215 kD subunit (Fragment) n=1
Tax=Drosophila simulans RepID=Q1WKU2_DROSI
Length = 746
Score = 155 bits (393), Expect = 1e-36
Identities = 74/107 (69%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW++GEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 171 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLVGEIETRFQQAQANPGEMVGALAAQSLG 230
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 231 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 277
[201][TOP]
>UniRef100_B4YVW8 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
hapla RepID=B4YVW8_MELHA
Length = 219
Score = 155 bits (393), Expect = 1e-36
Identities = 74/107 (69%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ +++KL+ EAFEW++GEIE+RF ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSMLCSLKMAKQHKLNEEAFEWLLGEIETRFCTAIVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYA VSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 70 EPATQMTLNTFHYASVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 116
[202][TOP]
>UniRef100_B4YVV9 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
incognita RepID=B4YVV9_MELIC
Length = 219
Score = 155 bits (393), Expect = 1e-36
Identities = 74/107 (69%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ +++KL+ EAFEW++GEIE+R ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSMLCSLKMAKQHKLNEEAFEWLLGEIETRLCTAIVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 116
[203][TOP]
>UniRef100_B4YVV3 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
javanica RepID=B4YVV3_MELJA
Length = 219
Score = 155 bits (393), Expect = 1e-36
Identities = 74/107 (69%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ NILLRS L S ++ +++KL+ EAFEW++GEIE+RF ++V PGEM+G +AAQS+G
Sbjct: 10 ATILMNILLRSMLCSLKMAKQHKLNEEAFEWLLGEIETRFCTAIVQPGEMVGALAAQSLG 69
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPR +EIINV+K+ KTPSL+V+L
Sbjct: 70 EPATQMTLNTFHYAGVSAKNVTLGVPRRKEIINVSKKPKTPSLTVFL 116
[204][TOP]
>UniRef100_B4NDK9 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4NDK9_DROWI
Length = 1890
Score = 155 bits (393), Expect = 1e-36
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 1029 ATLLFQCLVRSTLCTKYVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALAAQSLG 1088
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1089 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1135
[205][TOP]
>UniRef100_B4IK28 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
RepID=B4IK28_DROSE
Length = 1887
Score = 155 bits (393), Expect = 1e-36
Identities = 74/107 (69%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW++GEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 1029 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLVGEIETRFQQAQANPGEMVGALAAQSLG 1088
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1089 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1135
[206][TOP]
>UniRef100_A9YGC1 RNA polymerase II 215 kD subunit (Fragment) n=2 Tax=melanogaster
subgroup RepID=A9YGC1_DROME
Length = 247
Score = 155 bits (393), Expect = 1e-36
Identities = 74/107 (69%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW++GEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 86 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLVGEIETRFQQAQANPGEMVGALAAQSLG 145
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 146 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 192
[207][TOP]
>UniRef100_A9UNH9 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster
RepID=A9UNH9_DROME
Length = 1887
Score = 155 bits (393), Expect = 1e-36
Identities = 74/107 (69%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW++GEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 1029 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLVGEIETRFQQAQANPGEMVGALAAQSLG 1088
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1089 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1135
[208][TOP]
>UniRef100_P04052 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Drosophila
melanogaster RepID=RPB1_DROME
Length = 1887
Score = 155 bits (393), Expect = 1e-36
Identities = 74/107 (69%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V EE++LS EAFEW++GEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 1029 ATLLFQCLIRSTLCTKYVSEEFRLSTEAFEWLVGEIETRFQQAQANPGEMVGALAAQSLG 1088
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1089 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1135
[209][TOP]
>UniRef100_A9QME9 RNA polymerase 2 (Fragment) n=1 Tax=Choriorhabditis cristata
RepID=A9QME9_9BILA
Length = 378
Score = 155 bits (391), Expect = 2e-36
Identities = 72/102 (70%), Positives = 91/102 (89%)
Frame = +3
Query: 18 NILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQ 197
NIL+RSTL SK++ +KL+ EAFEW++GE+E+RF Q++ PGEM+G +AAQS+GEPATQ
Sbjct: 1 NILIRSTLCSKKMATSHKLNAEAFEWLLGEVETRFQQAIAQPGEMVGALAAQSLGEPATQ 60
Query: 198 MTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
MTLNTFHYAGVSAKNVTLGVPRL+EIINV+K +KTPSL+ +L
Sbjct: 61 MTLNTFHYAGVSAKNVTLGVPRLKEIINVSKTLKTPSLTCFL 102
[210][TOP]
>UniRef100_A8Q5I6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8Q5I6_MALGO
Length = 1607
Score = 155 bits (391), Expect = 2e-36
Identities = 77/107 (71%), Positives = 92/107 (85%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F I LRS L SK+V+E + L+REA+EWV+GEIE +F +S+ PGEM G +AAQSIG
Sbjct: 819 ATLLFKIHLRSFLCSKQVIEVHHLTREAWEWVLGEIEGQFARSVAQPGEMCGTLAAQSIG 878
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EIIN A+ IKTPS++VYL
Sbjct: 879 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINCAENIKTPSVTVYL 925
[211][TOP]
>UniRef100_UPI000186D846 predicted protein n=1 Tax=Pediculus humanus corporis
RepID=UPI000186D846
Length = 1885
Score = 154 bits (390), Expect = 2e-36
Identities = 75/107 (70%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V E+ +LS EAFEW+IGEIE+RF Q+ APGEM+G +AAQS+G
Sbjct: 1022 ATLLFQCLVRSTLCTKCVSEDMRLSTEAFEWLIGEIETRFQQAQCAPGEMVGALAAQSLG 1081
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1082 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1128
[212][TOP]
>UniRef100_UPI000179338A PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179338A
Length = 1862
Score = 154 bits (389), Expect = 3e-36
Identities = 74/107 (69%), Positives = 92/107 (85%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V E ++LS EAFEW+IGEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 1030 ATLLFQCLVRSTLCTKLVSERFRLSSEAFEWLIGEIENRFKQAQAQPGEMVGALAAQSLG 1089
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1090 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1136
[213][TOP]
>UniRef100_UPI0000E48673 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48673
Length = 1880
Score = 154 bits (389), Expect = 3e-36
Identities = 74/107 (69%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT N L+RSTL+S RV +E+KLS E+FEW++GEIE+RF QSL GEM+G +AAQS+G
Sbjct: 1031 ATYLMNCLIRSTLSSTRVAQEHKLSPESFEWLLGEIETRFNQSLAMAGEMVGALAAQSLG 1090
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIIN++K+ +TPSL+ +L
Sbjct: 1091 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINISKKPRTPSLTCFL 1137
[214][TOP]
>UniRef100_UPI0000E48672 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48672
Length = 1913
Score = 154 bits (389), Expect = 3e-36
Identities = 74/107 (69%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT N L+RSTL+S RV +E+KLS E+FEW++GEIE+RF QSL GEM+G +AAQS+G
Sbjct: 1037 ATYLMNCLIRSTLSSTRVAQEHKLSPESFEWLLGEIETRFNQSLAMAGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIIN++K+ +TPSL+ +L
Sbjct: 1097 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINISKKPRTPSLTCFL 1143
[215][TOP]
>UniRef100_UPI0000E48671 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48671
Length = 1921
Score = 154 bits (389), Expect = 3e-36
Identities = 74/107 (69%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT N L+RSTL+S RV +E+KLS E+FEW++GEIE+RF QSL GEM+G +AAQS+G
Sbjct: 1037 ATYLMNCLIRSTLSSTRVAQEHKLSPESFEWLLGEIETRFNQSLAMAGEMVGALAAQSLG 1096
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIIN++K+ +TPSL+ +L
Sbjct: 1097 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINISKKPRTPSLTCFL 1143
[216][TOP]
>UniRef100_Q6FQS9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FQS9_CANGA
Length = 1715
Score = 154 bits (389), Expect = 3e-36
Identities = 73/107 (68%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
A F LLRS LA++RVL+EY+L++EAFEWV+ +E++FL+S+V PGEM+G +AAQSIG
Sbjct: 1014 AVTLFCCLLRSRLATRRVLQEYRLTKEAFEWVLNNVEAQFLRSIVHPGEMVGVLAAQSIG 1073
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGV++K VT GVPRL+EI+NVAK +KTPSL+VYL
Sbjct: 1074 EPATQMTLNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLTVYL 1120
[217][TOP]
>UniRef100_UPI000179348F PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179348F
Length = 1862
Score = 154 bits (388), Expect = 4e-36
Identities = 73/107 (68%), Positives = 92/107 (85%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +K V E ++LS EAFEW++GEIE+RF Q+ PGEM+G +AAQS+G
Sbjct: 1030 ATLLFQCLVRSTLCTKLVSENFRLSSEAFEWLVGEIENRFKQAQAQPGEMVGALAAQSLG 1089
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIIN++K+ K PSL+V+L
Sbjct: 1090 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFL 1136
[218][TOP]
>UniRef100_O04142 DNA-directed RNA polymerase (Fragment) n=1 Tax=Porphyra yezoensis
RepID=O04142_PORYE
Length = 1685
Score = 154 bits (388), Expect = 4e-36
Identities = 77/107 (71%), Positives = 92/107 (85%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F + +R++LASK VL E++L+R+AF W++ EIE+RF Q+L GEM+G AAQSIG
Sbjct: 976 ATLLFQVHVRASLASKVVLSEHRLTRKAFTWLLIEIENRFQQALAPAGEMVGATAAQSIG 1035
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+KR KTPSL VYL
Sbjct: 1036 EPATQMTLNTFHYAGVSAKNVTLGVPRLQEIINVSKRTKTPSLVVYL 1082
[219][TOP]
>UniRef100_Q17085 DNA-directed RNA polymerase (Fragment) n=1 Tax=Artemia salina
RepID=Q17085_ARTSA
Length = 1341
Score = 154 bits (388), Expect = 4e-36
Identities = 73/107 (68%), Positives = 92/107 (85%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F L+RSTL +KR+ +EY+L+ EAFEW+IGEIE+RF + PGEM+G +AAQS+G
Sbjct: 949 ATLLFQCLVRSTLCTKRLADEYRLNTEAFEWLIGEIETRFQLAQAVPGEMVGAIAAQSLG 1008
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EIINV++ K PSL+V+L
Sbjct: 1009 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINVSRSPKAPSLTVFL 1055
[220][TOP]
>UniRef100_Q9AXN1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Botryocladia
uvarioides RepID=Q9AXN1_9FLOR
Length = 1712
Score = 153 bits (387), Expect = 5e-36
Identities = 76/107 (71%), Positives = 90/107 (84%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ F I +RS LA K+V+ ++L AF W++GEIE+RFL ++ APGE IG +AAQSIG
Sbjct: 959 ATMIFQIHVRSMLACKQVMVRHRLDINAFLWILGEIENRFLGAIAAPGENIGAIAAQSIG 1018
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINV+K KTPSL+VYL
Sbjct: 1019 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVSKHTKTPSLTVYL 1065
[221][TOP]
>UniRef100_B7G9I2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G9I2_PHATR
Length = 1706
Score = 153 bits (387), Expect = 5e-36
Identities = 75/107 (70%), Positives = 92/107 (85%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT + IL+R+ L+SKRVL++++LS+ A WV+GEIE+RF ++V PGEM G +AAQSIG
Sbjct: 971 ATTLYRILIRTMLSSKRVLKDWRLSKAALNWVVGEIETRFNIAMVNPGEMAGVLAAQSIG 1030
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINVAK KTP L++YL
Sbjct: 1031 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVAKTPKTPGLTIYL 1077
[222][TOP]
>UniRef100_Q9BMP2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stylonychia mytilus
RepID=Q9BMP2_STYMT
Length = 1678
Score = 153 bits (387), Expect = 5e-36
Identities = 73/107 (68%), Positives = 92/107 (85%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
+T F I LRS L SK V+++ +LS++AF W++GEI+SRF Q+LV PGEM+G + AQS+G
Sbjct: 930 STWLFKIYLRSLLNSKAVIQQERLSKDAFNWILGEIKSRFDQALVNPGEMVGSIGAQSMG 989
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINVAK IKTPS+ ++L
Sbjct: 990 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVAKNIKTPSMKIFL 1036
[223][TOP]
>UniRef100_B4YVV2 RNA polymerase II large subunit (Fragment) n=1 Tax=Meloidogyne
javanica RepID=B4YVV2_MELJA
Length = 219
Score = 153 bits (387), Expect = 5e-36
Identities = 73/106 (68%), Positives = 92/106 (86%)
Frame = +3
Query: 6 TLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 185
T+ N LLRS L S ++ +++KL+ EAFEW++GEIE+RF + V PGEM+G +AAQS+GE
Sbjct: 11 TILMNTLLRSMLCSLKMAKQHKLNEEAFEWLLGEIETRFCTATVQPGEMVGALAAQSLGE 70
Query: 186 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
PATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V+L
Sbjct: 71 PATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVFL 116
[224][TOP]
>UniRef100_Q010D7 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
RepID=Q010D7_OSTTA
Length = 1673
Score = 153 bits (386), Expect = 7e-36
Identities = 76/106 (71%), Positives = 92/106 (86%)
Frame = +3
Query: 6 TLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 185
TL F +R+ LA+KRVL+++KL+R F+WVIGE+ESRF +L PG+ IG VAAQSIGE
Sbjct: 1031 TLLFFAHVRANLAAKRVLKDHKLTRAGFDWVIGEVESRFKMALAPPGDGIGVVAAQSIGE 1090
Query: 186 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
PATQMTLNTFH+AGVSAKNVTLGVPRL+EIIN+AK+IKTPSL+V L
Sbjct: 1091 PATQMTLNTFHFAGVSAKNVTLGVPRLKEIINIAKQIKTPSLTVAL 1136
[225][TOP]
>UniRef100_Q5KGG3 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KGG3_CRYNE
Length = 1786
Score = 153 bits (386), Expect = 7e-36
Identities = 76/107 (71%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FN+LLRS LA++RVLEEY L+REAF+WVIGE+E F +++V EM+G +AAQSIG
Sbjct: 1030 ATLVFNMLLRSHLATRRVLEEYHLNREAFDWVIGEVEQIFNKAVVNAAEMVGTLAAQSIG 1089
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGV++K+VT GVPRL+EIINVA I+TP+L+VYL
Sbjct: 1090 EPATQMTLNTFHYAGVASKSVTGGVPRLKEIINVAVNIRTPALNVYL 1136
[226][TOP]
>UniRef100_Q4P7Q0 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4P7Q0_USTMA
Length = 1774
Score = 153 bits (386), Expect = 7e-36
Identities = 74/107 (69%), Positives = 92/107 (85%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F I LRS L SK V+E++ +++EA+EW++GEIE +F +S+ PGEM G +AAQSIG
Sbjct: 1026 ATLLFKIHLRSYLCSKMVIEQHHINKEAWEWILGEIEGQFARSVANPGEMCGTLAAQSIG 1085
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVS+KNVTLGVPRL+EIIN A+ IKTPS++VYL
Sbjct: 1086 EPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINCAENIKTPSVTVYL 1132
[227][TOP]
>UniRef100_A4S3M0 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S3M0_OSTLU
Length = 1646
Score = 152 bits (385), Expect = 9e-36
Identities = 76/106 (71%), Positives = 91/106 (85%)
Frame = +3
Query: 6 TLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 185
T+ F +R+ LA+KRVL+E+KL+R F+WVIGEIESRF +L PG+ IG VAAQSIGE
Sbjct: 1011 TMLFFAHVRANLAAKRVLKEHKLTRAGFDWVIGEIESRFKMALAPPGDGIGTVAAQSIGE 1070
Query: 186 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
PATQMTLNTFH+AGVSAKNVTLGVPRL+EIIN+AK IKTPSL++ L
Sbjct: 1071 PATQMTLNTFHFAGVSAKNVTLGVPRLKEIINIAKSIKTPSLTIAL 1116
[228][TOP]
>UniRef100_A9QMF8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhabditis sp. SB347
RepID=A9QMF8_9BILA
Length = 621
Score = 152 bits (385), Expect = 9e-36
Identities = 73/107 (68%), Positives = 91/107 (85%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SK++ YKL+ EAFEW++GE+E+RF Q++ G +AAQS+G
Sbjct: 246 ATLLMNILIRSTLCSKKMASTYKLNSEAFEWLLGEVETRFKQAIAXXXXXXGALAAQSLG 305
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K++KTPSL+V+L
Sbjct: 306 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKQLKTPSLTVFL 352
[229][TOP]
>UniRef100_O09451 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bonnemaisonia hamifera
RepID=O09451_9FLOR
Length = 1732
Score = 152 bits (383), Expect = 1e-35
Identities = 74/107 (69%), Positives = 92/107 (85%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL F I +RS LA K++++ ++L+ +AF W++GE+E+RF+ VAPGE IG +AAQSIG
Sbjct: 962 ATLLFQIHMRSMLACKKLIQLHRLTFKAFLWLLGEVENRFMMCRVAPGENIGAIAAQSIG 1021
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K KTPSL+VYL
Sbjct: 1022 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNTKTPSLTVYL 1068
[230][TOP]
>UniRef100_Q6CL79 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CL79_KLULA
Length = 1720
Score = 152 bits (383), Expect = 1e-35
Identities = 72/107 (67%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
A F LLRS LA++RV+EEY+L+R+ F+WV+ IE++FL+S+V PGEM+G +AAQSIG
Sbjct: 1014 AITLFCCLLRSRLATRRVIEEYRLNRQTFDWVLNNIEAQFLRSIVHPGEMVGVLAAQSIG 1073
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGV++K VT GVPRL+EI+NVAK +KTPSL+VYL
Sbjct: 1074 EPATQMTLNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLTVYL 1120
[231][TOP]
>UniRef100_C8Z6G2 Rpo21p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8Z6G2_YEAST
Length = 1733
Score = 152 bits (383), Expect = 1e-35
Identities = 72/107 (67%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
A F LLRS LA++RVL+EY+L+++AF+WV+ IE++FL+S+V PGEM+G +AAQSIG
Sbjct: 1014 AVTLFCCLLRSRLATRRVLQEYRLTKQAFDWVLSNIEAQFLRSVVHPGEMVGVLAAQSIG 1073
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGV++K VT GVPRL+EI+NVAK +KTPSL+VYL
Sbjct: 1074 EPATQMTLNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLTVYL 1120
[232][TOP]
>UniRef100_C7GKZ2 Rpo21p n=2 Tax=Saccharomyces cerevisiae RepID=C7GKZ2_YEAS2
Length = 1733
Score = 152 bits (383), Expect = 1e-35
Identities = 72/107 (67%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
A F LLRS LA++RVL+EY+L+++AF+WV+ IE++FL+S+V PGEM+G +AAQSIG
Sbjct: 1014 AVTLFCCLLRSRLATRRVLQEYRLTKQAFDWVLSNIEAQFLRSVVHPGEMVGVLAAQSIG 1073
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGV++K VT GVPRL+EI+NVAK +KTPSL+VYL
Sbjct: 1074 EPATQMTLNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLTVYL 1120
[233][TOP]
>UniRef100_C5E245 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5E245_LACTC
Length = 1740
Score = 152 bits (383), Expect = 1e-35
Identities = 71/107 (66%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
A F LLRS LA++RV++EY+L+++ FEWV+ +ES+FL+S+V PGEM+G +AAQSIG
Sbjct: 1014 AVTLFCCLLRSRLATRRVIQEYRLNKQTFEWVLSNVESQFLRSIVHPGEMVGVLAAQSIG 1073
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGV++K VT GVPRL+EI+NVAK +KTPSL+VYL
Sbjct: 1074 EPATQMTLNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLTVYL 1120
[234][TOP]
>UniRef100_B3LH31 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae RM11-1a
RepID=B3LH31_YEAS1
Length = 1733
Score = 152 bits (383), Expect = 1e-35
Identities = 72/107 (67%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
A F LLRS LA++RVL+EY+L+++AF+WV+ IE++FL+S+V PGEM+G +AAQSIG
Sbjct: 1014 AVTLFCCLLRSRLATRRVLQEYRLTKQAFDWVLSNIEAQFLRSVVHPGEMVGVLAAQSIG 1073
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGV++K VT GVPRL+EI+NVAK +KTPSL+VYL
Sbjct: 1074 EPATQMTLNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLTVYL 1120
[235][TOP]
>UniRef100_A7TTU2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Vanderwaltozyma
polyspora DSM 70294 RepID=A7TTU2_VANPO
Length = 1311
Score = 152 bits (383), Expect = 1e-35
Identities = 73/107 (68%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
A F LLRS LA++RVLEEY+L+++AF+WV+ IES+FL+S+V PGEM+G +AAQSIG
Sbjct: 696 AITLFCCLLRSRLAARRVLEEYRLTKQAFDWVLSNIESQFLRSIVHPGEMVGVLAAQSIG 755
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGV++K VT GVPRL+EI+NVAK +KTPS +VYL
Sbjct: 756 EPATQMTLNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSSTVYL 802
[236][TOP]
>UniRef100_P04050 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Saccharomyces
cerevisiae RepID=RPB1_YEAST
Length = 1733
Score = 152 bits (383), Expect = 1e-35
Identities = 72/107 (67%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
A F LLRS LA++RVL+EY+L+++AF+WV+ IE++FL+S+V PGEM+G +AAQSIG
Sbjct: 1014 AVTLFCCLLRSRLATRRVLQEYRLTKQAFDWVLSNIEAQFLRSVVHPGEMVGVLAAQSIG 1073
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGV++K VT GVPRL+EI+NVAK +KTPSL+VYL
Sbjct: 1074 EPATQMTLNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLTVYL 1120
[237][TOP]
>UniRef100_C4QEL8 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
RepID=C4QEL8_SCHMA
Length = 1785
Score = 151 bits (382), Expect = 2e-35
Identities = 70/107 (65%), Positives = 94/107 (87%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL + L+R++L +K+V+ +Y+LS EA +WV+GE+ +RF Q+ + PGEM+G +AAQS+G
Sbjct: 927 ATLLLSSLIRASLCAKKVIIDYRLSYEALDWVLGEVRARFQQAHIHPGEMVGALAAQSLG 986
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+KR KTPS++++L
Sbjct: 987 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKRPKTPSMTIFL 1033
[238][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
RepID=Q9AXN0_9RHOD
Length = 1746
Score = 150 bits (380), Expect = 3e-35
Identities = 76/107 (71%), Positives = 92/107 (85%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL ++I +R+ LASK +L+EY+L ++AF ++GEIE+RFL + PGEMIG VA QSIG
Sbjct: 1032 ATLLWSIHIRAFLASKVILKEYRLDKKAFMHLLGEIENRFLHAKCPPGEMIGAVAPQSIG 1091
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINVAK KTPSL+VYL
Sbjct: 1092 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVAKHCKTPSLTVYL 1138
[239][TOP]
>UniRef100_Q9C428 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis
macrandra RepID=Q9C428_9FUNG
Length = 1603
Score = 150 bits (380), Expect = 3e-35
Identities = 75/107 (70%), Positives = 89/107 (83%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNIL+R LA+KRV E++L+R AF W+IGEIESRF + V P EM+G +AAQSIG
Sbjct: 960 ATLLFNILVRHLLATKRVYAEHRLNRNAFRWLIGEIESRFKAAKVNPAEMVGTIAAQSIG 1019
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGV +KNVTLGVPRL+EIINVA ++TPSL V L
Sbjct: 1020 EPATQMTLNTFHFAGVGSKNVTLGVPRLKEIINVATNLRTPSLLVCL 1066
[240][TOP]
>UniRef100_B3RM26 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3RM26_TRIAD
Length = 1784
Score = 150 bits (379), Expect = 4e-35
Identities = 77/107 (71%), Positives = 90/107 (84%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL FNILLRS L+SKRV EEY L+ EAF+W+IGE++ PGEM+G +AAQS+G
Sbjct: 1025 ATLLFNILLRSVLSSKRVTEEYHLTSEAFDWLIGEVQ---------PGEMVGPLAAQSLG 1075
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINV+K+ KTPSL+V L
Sbjct: 1076 EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVIL 1122
[241][TOP]
>UniRef100_A9QMG6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Teratorhabditis
palmarum RepID=A9QMG6_9BILA
Length = 633
Score = 149 bits (377), Expect = 7e-35
Identities = 73/107 (68%), Positives = 89/107 (83%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NIL+RSTL SKRV +KL+ EAF+W++GEIE RF Q++ G +AAQS+G
Sbjct: 246 ATLLMNILIRSTLCSKRVASMHKLNNEAFDWLLGEIEHRFKQAIAXXXXXXGALAAQSLG 305
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K+ KTPSL++YL
Sbjct: 306 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTIYL 352
[242][TOP]
>UniRef100_C5DXL0 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DXL0_ZYGRC
Length = 1744
Score = 149 bits (377), Expect = 7e-35
Identities = 71/107 (66%), Positives = 92/107 (85%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
A F L+RS LAS+RV++EY+L+++AFEWV+ IE +FL+S+V PGEM+G +AAQSIG
Sbjct: 1014 AITLFCCLMRSRLASRRVIQEYRLTKQAFEWVLNNIEVQFLRSVVHPGEMVGVLAAQSIG 1073
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGV++K VT GVPRL+EI+NVAK +KTPSL+ YL
Sbjct: 1074 EPATQMTLNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLTAYL 1120
[243][TOP]
>UniRef100_Q75A34 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Eremothecium
gossypii RepID=RPB1_ASHGO
Length = 1745
Score = 149 bits (377), Expect = 7e-35
Identities = 71/107 (66%), Positives = 92/107 (85%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
A F LLRS LA++RV+ EY+L+++ FEWV+ IE++FL+S+V PGEM+G +AAQSIG
Sbjct: 1014 AITLFCCLLRSRLATRRVITEYRLTKQTFEWVLNNIEAQFLRSIVHPGEMVGVLAAQSIG 1073
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGV++K VT GVPRL+EI+NVAK +KTPSL+VYL
Sbjct: 1074 EPATQMTLNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLTVYL 1120
[244][TOP]
>UniRef100_Q84KP6 DNA-directed RNA polymerase n=1 Tax=Cyanidioschyzon merolae
RepID=Q84KP6_CYAME
Length = 1819
Score = 148 bits (373), Expect = 2e-34
Identities = 70/107 (65%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
A L F +R+ LA+KRVL+ ++L+ +AF W++GEIE+RF+++ PGEM+G VAAQS+G
Sbjct: 1028 AVLLFAAHVRAELATKRVLQIHRLNSKAFAWLLGEIETRFVRARATPGEMVGAVAAQSLG 1087
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+E+INVA++ KTPS++VYL
Sbjct: 1088 EPATQMTLNTFHFAGVSAKNVTLGVPRLKELINVARQAKTPSVTVYL 1134
[245][TOP]
>UniRef100_Q5CUJ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cryptosporidium parvum
Iowa II RepID=Q5CUJ2_CRYPV
Length = 1902
Score = 147 bits (372), Expect = 3e-34
Identities = 71/107 (66%), Positives = 89/107 (83%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT I +RS+LASK++LE +L AFEW++GEIE +F +SL GEM+G +AAQSIG
Sbjct: 1069 ATTLLGIHIRSSLASKKILEVDRLGPTAFEWILGEIEHQFYRSLAHSGEMVGTIAAQSIG 1128
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGV +KNVTLGVPRLRE+INVAK ++TP+L+VYL
Sbjct: 1129 EPATQMTLNTFHFAGVGSKNVTLGVPRLRELINVAKNVRTPTLTVYL 1175
[246][TOP]
>UniRef100_Q5CH45 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium hominis
RepID=Q5CH45_CRYHO
Length = 1895
Score = 147 bits (372), Expect = 3e-34
Identities = 71/107 (66%), Positives = 89/107 (83%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT I +RS+LASK++LE +L AFEW++GEIE +F +SL GEM+G +AAQSIG
Sbjct: 1062 ATTLLGIHIRSSLASKKILEVDRLGPTAFEWILGEIEHQFYRSLAHSGEMVGTIAAQSIG 1121
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGV +KNVTLGVPRLRE+INVAK ++TP+L+VYL
Sbjct: 1122 EPATQMTLNTFHFAGVGSKNVTLGVPRLRELINVAKNVRTPTLTVYL 1168
[247][TOP]
>UniRef100_A9QMG5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mesorhabditis
longespiculosa RepID=A9QMG5_9BILA
Length = 623
Score = 147 bits (372), Expect = 3e-34
Identities = 73/107 (68%), Positives = 90/107 (84%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
ATL NILLRSTL SK++ E++KL++E FEW++GEIE RF Q++V G +A QS+G
Sbjct: 246 ATLLMNILLRSTLCSKQMAEKHKLNQEGFEWLLGEIEHRFQQAIVXXXXXXGXLAXQSLG 305
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVSAKNVTLGVPRL+EIINV+K KTPSL+V+L
Sbjct: 306 EPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVSKSPKTPSLTVFL 352
[248][TOP]
>UniRef100_Q2HDK0 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2HDK0_CHAGB
Length = 1756
Score = 147 bits (372), Expect = 3e-34
Identities = 72/107 (67%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
+T+ F I LRS LA KR+ E ++++ AFE ++GE+E+R+ +S+VAPGEM+G +AAQSIG
Sbjct: 1031 STILFKIQLRSRLAYKRLAVEQRINKLAFEHILGELENRWSRSMVAPGEMVGVLAAQSIG 1090
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EI+NVAK IKTPS+ VYL
Sbjct: 1091 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNVAKDIKTPSMVVYL 1137
[249][TOP]
>UniRef100_C7YI77 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YI77_NECH7
Length = 1750
Score = 147 bits (370), Expect = 5e-34
Identities = 71/107 (66%), Positives = 95/107 (88%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ F LLRS LA K V++E++L++ AF+ VIGE+++R+ ++ V+PGEM+G +AAQSIG
Sbjct: 1027 ATILFKGLLRSRLAFKEVVKEHRLNKLAFDHVIGELQNRWDRAFVSPGEMVGVLAAQSIG 1086
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EI+N+AK IKTPS++VYL
Sbjct: 1087 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNLAKNIKTPSMAVYL 1133
[250][TOP]
>UniRef100_B2AA31 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2AA31_PODAN
Length = 1748
Score = 147 bits (370), Expect = 5e-34
Identities = 72/107 (67%), Positives = 93/107 (86%)
Frame = +3
Query: 3 ATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 182
AT+ F I +RS LA KR+ E +L++ AF+ V+GE+E+R+ +S+V+PGEM+G +AAQSIG
Sbjct: 1030 ATILFKIQIRSRLAFKRLAVEQRLNKLAFDHVLGELENRWSRSMVSPGEMVGVLAAQSIG 1089
Query: 183 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 323
EPATQMTLNTFH+AGVS+KNVTLGVPRL+EI+NVAK IKTPS+ VYL
Sbjct: 1090 EPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNVAKDIKTPSMVVYL 1136