[UP]
[1][TOP]
>UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis
thaliana RepID=RPB1_ARATH
Length = 1840
Score = 367 bits (941), Expect = e-100
Identities = 175/175 (100%), Positives = 175/175 (100%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL
Sbjct: 1408 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 1467
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQ 360
NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQ
Sbjct: 1468 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQ 1527
Query: 361 FSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
FSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP
Sbjct: 1528 FSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 1582
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/93 (50%), Positives = 56/93 (60%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1586 GYSPTSPAYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1640
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1641 PAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSP 1673
Score = 85.1 bits (209), Expect = 3e-15
Identities = 48/99 (48%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Frame = +1
Query: 253 TPARSPVSGT--PYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SP 408
+P SP S T P G + SP + +SP ++SP+S SP
Sbjct: 1570 SPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPT--SPSYSPTSPSYSPTSP 1627
Query: 409 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1628 SYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSP 1666
Score = 85.1 bits (209), Expect = 3e-15
Identities = 48/91 (52%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S SP Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1633 SPSYSPTSPA---YSPTSPAY--SPTSPAYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1684
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSPGYSPTSP+YSP
Sbjct: 1685 YSPTSPSYSPTSPAYSPTSPGYSPTSPSYSP 1715
Score = 84.3 bits (207), Expect = 5e-15
Identities = 48/91 (52%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1640 SPAYSPTSPA---YSPTSPAY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1691
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSPGYSPTSP YSPTSP+Y P
Sbjct: 1692 YSPTSPAYSPTSPGYSPTSPSYSPTSPSYGP 1722
Score = 84.3 bits (207), Expect = 5e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1647 SPAYSPTSPA---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPA 1698
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSPGYSPTSP YSPTSP Y PTSP+Y+P
Sbjct: 1699 YSPTSPGYSPTSPSYSPTSPSYGPTSPSYNP 1729
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S + SP+Y SP + +SP ++SP+S P YSP+SPG
Sbjct: 1654 SPAYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PAYSPTSPG 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y PTSP Y+P S YSP
Sbjct: 1706 YSPTSPSYSPTSPSYGPTSPSYNPQSAKYSP 1736
Score = 77.4 bits (189), Expect = 6e-13
Identities = 50/111 (45%), Positives = 61/111 (54%), Gaps = 18/111 (16%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNY-----LLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPG 411
G +P S T G SP+Y SP++ SP S+A+ SP +SP+S P
Sbjct: 1705 GYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPSIAYSP-SNARLSP---ASPYSPTS-PN 1759
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSP-------------GYSPTSPTYSP 525
YSP+SP YSPTSP YSP+SP YSP+SP GYSPT P YSP
Sbjct: 1760 YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSP 1810
[2][TOP]
>UniRef100_Q99366 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99366_SOYBN
Length = 625
Score = 344 bits (883), Expect = 2e-93
Identities = 161/175 (92%), Positives = 171/175 (97%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRNDTGP+MRCSFEETVDILLDAA YAETD LRGVTENIMLGQLAPIGTG+C LYL
Sbjct: 233 RHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGECALYL 292
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQ 360
NDEMLKNAIELQLPSYMDGL+FGMTPARSP+SGTPYHEG+MSP+YLLSPN+RLSP +DAQ
Sbjct: 293 NDEMLKNAIELQLPSYMDGLDFGMTPARSPISGTPYHEGLMSPSYLLSPNLRLSPTTDAQ 352
Query: 361 FSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
FSPYVGGMAFSP+SSPGYSPSSPGYSP+SPGYSPTSPGYSPTSPGYSPTSPTYSP
Sbjct: 353 FSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSP 407
Score = 85.9 bits (211), Expect = 2e-15
Identities = 49/91 (53%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP ++SP+S P YSP+SP
Sbjct: 458 SPAYSPTSPA---YSPTSPAY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 509
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSPGYSPTSP YSPTSP+YSP
Sbjct: 510 YSPTSPAYSPTSPGYSPTSPSYSPTSPSYSP 540
Score = 85.9 bits (211), Expect = 2e-15
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 465 SPAYSPTSPA---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPA 516
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSPGYSPTSP YSPTSP YSPTSP+Y+P
Sbjct: 517 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNP 547
Score = 85.1 bits (209), Expect = 3e-15
Identities = 48/91 (52%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S SP Y SP + +SP ++SP+S P YSP+SP
Sbjct: 451 SPSYSPTSPA---YSPTSPAY--SPTSPAYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 502
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSPGYSPTSP+YSP
Sbjct: 503 YSPTSPSYSPTSPAYSPTSPGYSPTSPSYSP 533
Score = 85.1 bits (209), Expect = 3e-15
Identities = 53/95 (55%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSG----TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSP 420
+PA SP S T SP+Y SP SP + Q + Y +A+SPSS P SP
Sbjct: 514 SPAYSPTSPGYSPTSPSYSPTSPSY--SPT---SPSYNPQSAKYSPSLAYSPSS-PRLSP 567
Query: 421 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SSP YSPTSP YSPTSP YSPTSP YSP+SPTYSP
Sbjct: 568 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP 601
Score = 80.1 bits (196), Expect = 9e-14
Identities = 46/91 (50%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S + SP+Y SP + +SP ++SP+S P YSP+SPG
Sbjct: 472 SPAYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PAYSPTSPG 523
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+P S YSP
Sbjct: 524 YSPTSPSYSPTSPSYSPTSPSYNPQSAKYSP 554
[3][TOP]
>UniRef100_Q99367 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99367_SOYBN
Length = 494
Score = 343 bits (879), Expect = 6e-93
Identities = 161/175 (92%), Positives = 170/175 (97%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRNDTGP+MRCSFEETVDILLDAA YAETD LRGVTENIMLGQLAPIGTG+C LYL
Sbjct: 73 RHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGECALYL 132
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQ 360
NDEMLKNAIELQLPSYMDGL+FGMTPARSP+SGTPYHEG+MSP+YLLSPN+RLSP SDAQ
Sbjct: 133 NDEMLKNAIELQLPSYMDGLDFGMTPARSPISGTPYHEGLMSPSYLLSPNLRLSPTSDAQ 192
Query: 361 FSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
FSPYVGGMAFSP+SSPGYSPSSPGYSP+SPGYSPTSPGYSPTSPGYSPTSP YSP
Sbjct: 193 FSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSP 247
Score = 85.9 bits (211), Expect = 2e-15
Identities = 49/97 (50%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP ++SP+S SP Y
Sbjct: 284 SPSYSPTSPS---YSPTSPSY--SPTSPAYSPTSPAYSPT--SPSYSPTSPSYSPTSPSY 336
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP YSPTSP YSPTSPGYSPTSP+YSP
Sbjct: 337 SPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSP 373
Score = 85.9 bits (211), Expect = 2e-15
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 305 SPAYSPTSPA---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPA 356
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSPGYSPTSP YSPTSP YSPTSP+Y+P
Sbjct: 357 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNP 387
Score = 85.1 bits (209), Expect = 3e-15
Identities = 53/95 (55%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSG----TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSP 420
+PA SP S T SP+Y SP SP + Q + Y +A+SPSS P SP
Sbjct: 354 SPAYSPTSPGYSPTSPSYSPTSPSY--SPT---SPSYNPQSAKYSPSLAYSPSS-PRLSP 407
Query: 421 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SSP YSPTSP YSPTSP YSPTSP YSP+SPTYSP
Sbjct: 408 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP 441
Score = 80.1 bits (196), Expect = 9e-14
Identities = 46/91 (50%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S + SP+Y SP + +SP ++SP+S P YSP+SPG
Sbjct: 312 SPAYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PAYSPTSPG 363
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+P S YSP
Sbjct: 364 YSPTSPSYSPTSPSYSPTSPSYNPQSAKYSP 394
Score = 69.7 bits (169), Expect = 1e-10
Identities = 42/100 (42%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNY-----LLSPNMRLSPMSD--AQFSPYVGGMAFSPSSS 405
G +P S T SP+Y SP++ SP S + SPY +S
Sbjct: 363 GYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTS 422
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SP YSP+SP YSP+SP S SP YSP+SP +SP
Sbjct: 423 PSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSP 462
Score = 65.1 bits (157), Expect = 3e-09
Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMM-SPNYLLSPNM-RLSPMS-----DAQFSPYVGGMAFSPSSSPG 411
+P+ SP S + + SP+ SP+ RLSP S +SP ++SP+S P
Sbjct: 375 SPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPT--SPSYSPTS-PS 431
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSP------GYSPTSPTYSP 525
YSPSSP YSP+SP S SP YSP+SP GYSP+ P YSP
Sbjct: 432 YSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQPGYSP 475
Score = 55.1 bits (131), Expect = 3e-06
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +1
Query: 265 SPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSP 441
SP S T + SP+Y SP+ S + + SPY G+ SP YSPSSP +SP
Sbjct: 409 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGV------SPDYSPSSPQFSP 462
Query: 442 TSPGYSPTSPGYSPTSPG-YSP 504
S GYSP+ PGYSP+S Y+P
Sbjct: 463 -STGYSPSQPGYSPSSTSQYTP 483
[4][TOP]
>UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA
binding / DNA-directed RNA polymerase n=1 Tax=Vitis
vinifera RepID=UPI0001985649
Length = 1848
Score = 337 bits (865), Expect = 2e-91
Identities = 156/175 (89%), Positives = 171/175 (97%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRNDTGP+MRCSFEETVDILLDAA YAETD LRGVTENIMLGQLAPIGTGDC LYL
Sbjct: 1406 RHGINRNDTGPMMRCSFEETVDILLDAAVYAETDFLRGVTENIMLGQLAPIGTGDCALYL 1465
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQ 360
ND+ML++AIELQLPSYM+GL+FGMTP+RSP++GTPYH+GMMSPNYLLSPN+RLSP++DAQ
Sbjct: 1466 NDQMLQHAIELQLPSYMEGLDFGMTPSRSPITGTPYHDGMMSPNYLLSPNLRLSPITDAQ 1525
Query: 361 FSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
FSPYVGGMAFSP+SSPGYSPSSPGYSP+SPGYSPTSPGYSPTSPGYSPTSP YSP
Sbjct: 1526 FSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSP 1580
Score = 85.9 bits (211), Expect = 2e-15
Identities = 50/97 (51%), Positives = 61/97 (62%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S P + SP+Y SP + +SP ++SP+S SP Y
Sbjct: 1638 SPSYSPTS--PVYSPT-SPSY--SPTSPAYSPTSPAYSPT--SPSYSPTSPSYSPTSPSY 1690
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP YSPTSP YSPTSPGYSPTSP+YSP
Sbjct: 1691 SPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSP 1727
Score = 85.9 bits (211), Expect = 2e-15
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1659 SPAYSPTSPA---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPA 1710
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSPGYSPTSP YSPTSP YSPTSP+Y+P
Sbjct: 1711 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNP 1741
Score = 84.3 bits (207), Expect = 5e-15
Identities = 47/93 (50%), Positives = 56/93 (60%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1591 GYSPTSPAYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1645
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1646 PVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSP 1678
Score = 80.9 bits (198), Expect = 5e-14
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S + SP+Y SP + +SP ++SP+S P YSP+SPG
Sbjct: 1666 SPAYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PAYSPTSPG 1717
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+P+S YSP
Sbjct: 1718 YSPTSPSYSPTSPSYSPTSPSYNPSSAKYSP 1748
Score = 76.6 bits (187), Expect = 1e-12
Identities = 52/114 (45%), Positives = 60/114 (52%), Gaps = 23/114 (20%)
Frame = +1
Query: 253 TPARSPVSG----TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------ 402
+PA SP S T SP+Y SP S A++SP +A+SPSS
Sbjct: 1708 SPAYSPTSPGYSPTSPSYSPTSPSY--SPTSPSYNPSSAKYSP---SLAYSPSSPRLSPS 1762
Query: 403 ------SPGYSPSSPGYSPTSPGYSPTSPGYSPT-------SPGYSPTSPTYSP 525
SP YSP+SP YSPTSP YSP SP YSPT SP YSP+SP YSP
Sbjct: 1763 SPYSPTSPNYSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSP 1816
Score = 65.9 bits (159), Expect = 2e-09
Identities = 47/105 (44%), Positives = 61/105 (58%), Gaps = 14/105 (13%)
Frame = +1
Query: 253 TPARSPVSGTPYH--EGMMSPNYLLSPNM-RLSPMS-----DAQFSPYVGGMAFSPSSSP 408
+P+ SP S + Y+ SP+ SP+ RLSP S +SP ++SP+S P
Sbjct: 1729 SPSYSPTSPS-YNPSSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPT--SPSYSPTS-P 1784
Query: 409 GYSPSSPGYSPTSPGYSPTSPGYSPTSP------GYSPTSPTYSP 525
YSP+SP YSPTSP S SP YSP+SP GYSP++P YSP
Sbjct: 1785 SYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPSAGYSPSAPGYSP 1829
[5][TOP]
>UniRef100_A7NVN7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7NVN7_VITVI
Length = 1010
Score = 337 bits (865), Expect = 2e-91
Identities = 156/175 (89%), Positives = 171/175 (97%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRNDTGP+MRCSFEETVDILLDAA YAETD LRGVTENIMLGQLAPIGTGDC LYL
Sbjct: 643 RHGINRNDTGPMMRCSFEETVDILLDAAVYAETDFLRGVTENIMLGQLAPIGTGDCALYL 702
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQ 360
ND+ML++AIELQLPSYM+GL+FGMTP+RSP++GTPYH+GMMSPNYLLSPN+RLSP++DAQ
Sbjct: 703 NDQMLQHAIELQLPSYMEGLDFGMTPSRSPITGTPYHDGMMSPNYLLSPNLRLSPITDAQ 762
Query: 361 FSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
FSPYVGGMAFSP+SSPGYSPSSPGYSP+SPGYSPTSPGYSPTSPGYSPTSP YSP
Sbjct: 763 FSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSP 817
Score = 85.9 bits (211), Expect = 2e-15
Identities = 50/97 (51%), Positives = 61/97 (62%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S P + SP+Y SP + +SP ++SP+S SP Y
Sbjct: 875 SPSYSPTS--PVYSPT-SPSY--SPTSPAYSPTSPAYSPT--SPSYSPTSPSYSPTSPSY 927
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP YSPTSP YSPTSPGYSPTSP+YSP
Sbjct: 928 SPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSP 964
Score = 85.9 bits (211), Expect = 2e-15
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 896 SPAYSPTSPA---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPA 947
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSPGYSPTSP YSPTSP YSPTSP+Y+P
Sbjct: 948 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNP 978
Score = 84.3 bits (207), Expect = 5e-15
Identities = 47/93 (50%), Positives = 56/93 (60%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 828 GYSPTSPAYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 882
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 883 PVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSP 915
Score = 80.9 bits (198), Expect = 5e-14
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S + SP+Y SP + +SP ++SP+S P YSP+SPG
Sbjct: 903 SPAYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PAYSPTSPG 954
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+P+S YSP
Sbjct: 955 YSPTSPSYSPTSPSYSPTSPSYNPSSAKYSP 985
Score = 62.8 bits (151), Expect = 1e-08
Identities = 45/92 (48%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SP+ SP S A +SP G +SP+S P YSP+SP
Sbjct: 917 SPSYSPTSPS---YSPTSPSYSPTSPSY--SPTSPA-YSPTSPG--YSPTS-PSYSPTSP 967
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP Y+P+S YSP S YSP+SP SP
Sbjct: 968 SYSPTSPSYNPSSAKYSP-SLAYSPSSPRLSP 998
[6][TOP]
>UniRef100_B9SXC0 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SXC0_RICCO
Length = 1855
Score = 329 bits (844), Expect = 6e-89
Identities = 156/175 (89%), Positives = 165/175 (94%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRNDTGPLMRCSFEETVDILLDAA YAE D LRGVTENIMLGQLAPIGTGDC LYL
Sbjct: 1406 RHGINRNDTGPLMRCSFEETVDILLDAAVYAEADYLRGVTENIMLGQLAPIGTGDCALYL 1465
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQ 360
ND+MLKNAIELQLPSYMDGL+FGMTPARSPVS TPYH+GMMSP+YLLSP++RLSP +DAQ
Sbjct: 1466 NDDMLKNAIELQLPSYMDGLDFGMTPARSPVSVTPYHDGMMSPSYLLSPSLRLSPTTDAQ 1525
Query: 361 FSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
FSPYV GM FSP+ SPGYSPSSPGYSP+SPGYSPTSPGYSPTSPGYSPTSP YSP
Sbjct: 1526 FSPYVSGMPFSPTLSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSP 1580
Score = 85.9 bits (211), Expect = 2e-15
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1652 SPAYSPTSPA---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPA 1703
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSPGYSPTSP YSPTSP YSPTSP+Y+P
Sbjct: 1704 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNP 1734
Score = 85.5 bits (210), Expect = 2e-15
Identities = 49/91 (53%), Positives = 59/91 (64%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S P + SP Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1638 SPSYSPTS--PVYSPT-SPAY--SPTSPAYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1689
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSPGYSPTSP+YSP
Sbjct: 1690 YSPTSPSYSPTSPAYSPTSPGYSPTSPSYSP 1720
Score = 85.1 bits (209), Expect = 3e-15
Identities = 53/95 (55%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSG----TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSP 420
+PA SP S T SP+Y SP SP + Q + Y +A+SPSS P SP
Sbjct: 1701 SPAYSPTSPGYSPTSPSYSPTSPSY--SPT---SPSYNPQSAKYSPSLAYSPSS-PRLSP 1754
Query: 421 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SSP YSPTSP YSPTSP YSPTSP YSP+SPTYSP
Sbjct: 1755 SSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP 1788
Score = 84.3 bits (207), Expect = 5e-15
Identities = 47/93 (50%), Positives = 56/93 (60%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1591 GYSPTSPAYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1645
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1646 PVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSP 1678
Score = 84.0 bits (206), Expect = 6e-15
Identities = 48/99 (48%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Frame = +1
Query: 253 TPARSPVSGT--PYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SP 408
+P SP S T P G + SP + +SP ++SP+S SP
Sbjct: 1575 SPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPT--SPSYSPTSPSYSPTSP 1632
Query: 409 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1633 SYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSP 1671
Score = 80.1 bits (196), Expect = 9e-14
Identities = 46/91 (50%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S + SP+Y SP + +SP ++SP+S P YSP+SPG
Sbjct: 1659 SPAYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PAYSPTSPG 1710
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+P S YSP
Sbjct: 1711 YSPTSPSYSPTSPSYSPTSPSYNPQSAKYSP 1741
Score = 69.7 bits (169), Expect = 1e-10
Identities = 42/100 (42%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNY-----LLSPNMRLSPMSD--AQFSPYVGGMAFSPSSS 405
G +P S T SP+Y SP++ SP S + SPY +S
Sbjct: 1710 GYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTS 1769
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SP YSP+SP YSP+SP S P YSP+SP YSP
Sbjct: 1770 PSYSPTSPSYSPSSPTYSPSSPYNSGVGPDYSPSSPQYSP 1809
Score = 64.7 bits (156), Expect = 4e-09
Identities = 47/105 (44%), Positives = 61/105 (58%), Gaps = 14/105 (13%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMM-SPNYLLSPNM-RLSPMS-----DAQFSPYVGGMAFSPSSSPG 411
+P+ SP S + + SP+ SP+ RLSP S +SP ++SP+S P
Sbjct: 1722 SPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPT--SPSYSPTS-PS 1778
Query: 412 YSPSSPGYSPTS-------PGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPSSP YSP+S P YSP+SP YSP S GYSP++P YSP
Sbjct: 1779 YSPSSPTYSPSSPYNSGVGPDYSPSSPQYSP-SAGYSPSAPGYSP 1822
[7][TOP]
>UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99368_SOYBN
Length = 977
Score = 312 bits (799), Expect = 1e-83
Identities = 153/176 (86%), Positives = 160/176 (90%), Gaps = 1/176 (0%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRNDTGP+MRCSFEETVDILLDAAAYAETD LRGVTENI+LGQLAPIGTG C LYL
Sbjct: 598 RHGINRNDTGPMMRCSFEETVDILLDAAAYAETDSLRGVTENIILGQLAPIGTGQCALYL 657
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEG-MMSPNYLLSPNMRLSPMSDA 357
ND MLKNAIELQLPSY DGL+FG+ TPYHEG MMSP+YLLSPN+RLSP SDA
Sbjct: 658 NDGMLKNAIELQLPSYTDGLDFGIMS-----GATPYHEGTMMSPSYLLSPNLRLSPSSDA 712
Query: 358 QFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
QFSPYVGGMAFSPSSSPGYSPSSPGYSP+SPGYSPTSPGYSPTSPGYSPTSPTYSP
Sbjct: 713 QFSPYVGGMAFSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSP 768
Score = 83.6 bits (205), Expect = 8e-15
Identities = 53/101 (52%), Positives = 61/101 (60%), Gaps = 10/101 (9%)
Frame = +1
Query: 253 TPARSPVSG----TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------ 402
+PA SP S T SP Y S + SP S + +SP A+SP+S
Sbjct: 777 SPAYSPTSPSYSPTSPAYSPTSPAYS-STSPAYSPTSPS-YSPT--SPAYSPTSPSYSLT 832
Query: 403 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 833 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSP 873
Score = 82.0 bits (201), Expect = 2e-14
Identities = 48/94 (51%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS---SSPGYSPS 423
+PA SP S P + SP+ SP S A SPS +SP YSP+
Sbjct: 791 SPAYSPTS--PAYSSTSPAYSPTSPSY--SPTSPAYSPTSPSYSLTSPSYSPTSPSYSPT 846
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP YSPTSP YSPTSP+Y+P
Sbjct: 847 SPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYNP 880
Score = 79.3 bits (194), Expect = 1e-13
Identities = 50/104 (48%), Positives = 61/104 (58%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+PA SP S + SP+Y SP SP + Q + Y +A+SPSS SP Y
Sbjct: 854 SPAYSPTSPS---YSPTSPSY--SPT---SPSYNPQSAKYSPSLAYSPSSPRLSPTSPNY 905
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPT-------SPGYSPTSPTYSP 525
SP+SP YSPTSP YSP+SP YSP+ SP YSPTSP +SP
Sbjct: 906 SPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPTSPQFSP 949
Score = 78.2 bits (191), Expect = 3e-13
Identities = 46/92 (50%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP Y SP+ + S + SP + S S YSPSSP
Sbjct: 840 SPSYSPTSPS---YSPTSPAYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSP 896
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPTSP YSPTSP YSPTSP YSP+SPTYSP
Sbjct: 897 RLSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP 928
Score = 68.2 bits (165), Expect = 3e-10
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 8/99 (8%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMM-SPNYLLSPNM-RLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
+P+ SP S + + SP+ SP+ RLSP S +SP ++SP+S P YSPSS
Sbjct: 868 SPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPTSP-NYSPT--SPSYSPTS-PSYSPSS 923
Query: 427 PGYSPTSPGYSPTSPGYSPTSP------GYSPTSPTYSP 525
P YSP+SP S SP YSPTSP GYSP+ P YSP
Sbjct: 924 PTYSPSSPYNSGVSPDYSPTSPQFSPSAGYSPSQPGYSP 962
[8][TOP]
>UniRef100_B9FZ51 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FZ51_ORYSJ
Length = 1526
Score = 309 bits (791), Expect = 9e-83
Identities = 149/189 (78%), Positives = 162/189 (85%), Gaps = 14/189 (7%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRNDTGPLMRCSFEETVDILLDAA YAE+D LRGVTENIMLGQLAPIGTG C LYL
Sbjct: 1077 RHGINRNDTGPLMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIGTGGCALYL 1136
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQ 360
ND+ML+ AIELQLPSY++GL+FGMTPARSP+SGTPYHEGMMSP+YLLSPN+R SP++DAQ
Sbjct: 1137 NDQMLQQAIELQLPSYVEGLDFGMTPARSPISGTPYHEGMMSPSYLLSPNIRASPITDAQ 1196
Query: 361 FSPYVGGMAFSPSSSPGYSPSS--------------PGYSPTSPGYSPTSPGYSPTSPGY 498
FSPYVGGMAFSP SPGY+PSS PGYSPTSP YSP SP YSPTSP Y
Sbjct: 1197 FSPYVGGMAFSPVPSPGYTPSSGGGYSPSSPVYSPGPGYSPTSPSYSPASPSYSPTSPSY 1256
Query: 499 SPTSPTYSP 525
+P SPTYSP
Sbjct: 1257 TPGSPTYSP 1265
Score = 87.0 bits (214), Expect = 7e-16
Identities = 49/91 (53%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1323 SPAYSPTSPA---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1374
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSPGYSPTSP+YSP
Sbjct: 1375 YSPTSPSYSPTSPAYSPTSPGYSPTSPSYSP 1405
Score = 87.0 bits (214), Expect = 7e-16
Identities = 49/91 (53%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1330 SPAYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1381
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSPGYSPTSP YSPTSP YSP
Sbjct: 1382 YSPTSPAYSPTSPGYSPTSPSYSPTSPNYSP 1412
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP +SP+S P YSP+SP
Sbjct: 1281 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPVYSPTS-PAYSPTSPA 1332
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1333 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1363
Score = 79.7 bits (195), Expect = 1e-13
Identities = 45/91 (49%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SPG
Sbjct: 1344 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PAYSPTSPG 1395
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+P+S YSP
Sbjct: 1396 YSPTSPSYSPTSPNYSPTSPSYNPSSAKYSP 1426
Score = 75.9 bits (185), Expect = 2e-12
Identities = 53/113 (46%), Positives = 58/113 (51%), Gaps = 22/113 (19%)
Frame = +1
Query: 253 TPARSPVSG----TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------ 402
+PA SP S T SPNY SP S A++SP A+SPSS
Sbjct: 1386 SPAYSPTSPGYSPTSPSYSPTSPNY--SPTSPSYNPSSAKYSP---SHAYSPSSPRLSPY 1440
Query: 403 ---SPGYSPSSPGYSPTSPGYSPTSPGYSPT---------SPGYSPTSPTYSP 525
SP YSP+SP YSPTSP YS SP YSPT SP YSPTSP YSP
Sbjct: 1441 SQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSPNYSP 1493
Score = 74.7 bits (182), Expect = 4e-12
Identities = 48/98 (48%), Positives = 59/98 (60%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP- 429
+P+ SP S + SP+Y SP + + +SP A+SP+S P YSP+SP
Sbjct: 1295 SPSYSPTSPS---YSPTSPSY--SPTSPVYSPTSPAYSPT--SPAYSPTS-PSYSPTSPS 1346
Query: 430 ------GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1347 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1384
Score = 74.7 bits (182), Expect = 4e-12
Identities = 49/114 (42%), Positives = 59/114 (51%), Gaps = 23/114 (20%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP A+SP+S PGYSP+SP
Sbjct: 1351 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPAYSPTS-PGYSPTSPS 1402
Query: 433 YSPTSPGYSPTSPGYSP-----------------------TSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+P TSP YSPTSPTYSP
Sbjct: 1403 YSPTSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRLSPYSQTSPNYSPTSPTYSP 1456
Score = 60.1 bits (144), Expect = 9e-08
Identities = 39/85 (45%), Positives = 47/85 (55%), Gaps = 16/85 (18%)
Frame = +1
Query: 304 SPNYLLSPNM-RLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSP---------G 453
SP++ SP+ RLSP S + +SP+S P YS SP YSPTSP
Sbjct: 1425 SPSHAYSPSSPRLSPYSQTSPNYSPTSPTYSPTS-PSYSQPSPSYSPTSPYTTSGGPSPD 1483
Query: 454 YSPTSPGYSP------TSPGYSPTS 510
YSPTSP YSP T+PGYSP+S
Sbjct: 1484 YSPTSPNYSPSGSYSPTAPGYSPSS 1508
Score = 57.0 bits (136), Expect = 8e-07
Identities = 39/87 (44%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P SP S T + SP Y SP+ S + SPY S SP YSP+SP
Sbjct: 1434 SPRLSPYSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTT----SGGPSPDYSPTSP 1489
Query: 430 GYSPTSPGYSPTSPGYSPTSPG--YSP 504
YSP S YSPT+PGYSP+S G +SP
Sbjct: 1490 NYSP-SGSYSPTAPGYSPSSTGQQFSP 1515
[9][TOP]
>UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5YGY9_SORBI
Length = 1857
Score = 295 bits (754), Expect = 2e-78
Identities = 146/183 (79%), Positives = 160/183 (87%), Gaps = 8/183 (4%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRNDTGPLMRCSFEETVDILLDAA YAE+D LRGVTENIMLGQLAPIGTG C LYL
Sbjct: 1405 RHGINRNDTGPLMRCSFEETVDILLDAAVYAESDHLRGVTENIMLGQLAPIGTGGCALYL 1464
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPM-SDA 357
ND+ML+ AIELQLPSY++GL+FGMTPARSP+SGTPYHEGMMSP+YLLSPN+R SP+ +DA
Sbjct: 1465 NDQMLQQAIELQLPSYVEGLDFGMTPARSPISGTPYHEGMMSPSYLLSPNIRASPINTDA 1524
Query: 358 QFSPYVGGMAFSPSSSP-GYSPSSPGYSPTSP------GYSPTSPGYSPTSPGYSPTSPT 516
FSPYVG MAFSP SP GYSPSS GYSP+SP GYSP SP YSP SP YSPTSP+
Sbjct: 1525 SFSPYVGHMAFSPFPSPGGYSPSSGGYSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPS 1584
Query: 517 YSP 525
Y+P
Sbjct: 1585 YTP 1587
Score = 87.4 bits (215), Expect = 5e-16
Identities = 49/91 (53%), Positives = 59/91 (64%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1666 SPAYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1717
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSPGYSPTSP YSPTSP+YSP
Sbjct: 1718 YSPTSPAYSPTSPGYSPTSPSYSPTSPSYSP 1748
Score = 87.0 bits (214), Expect = 7e-16
Identities = 49/91 (53%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1659 SPAYSPTSPA---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1710
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSPGYSPTSP+YSP
Sbjct: 1711 YSPTSPSYSPTSPAYSPTSPGYSPTSPSYSP 1741
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP +SP+S P YSP+SP
Sbjct: 1617 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPVYSPTS-PAYSPTSPA 1668
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1699
Score = 79.7 bits (195), Expect = 1e-13
Identities = 45/91 (49%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SPG
Sbjct: 1680 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PAYSPTSPG 1731
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+P+S YSP
Sbjct: 1732 YSPTSPSYSPTSPSYSPTSPSYNPSSAKYSP 1762
Score = 74.7 bits (182), Expect = 4e-12
Identities = 48/98 (48%), Positives = 59/98 (60%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP- 429
+P+ SP S + SP+Y SP + + +SP A+SP+S P YSP+SP
Sbjct: 1631 SPSYSPTSPS---YSPTSPSY--SPTSPVYSPTSPAYSPT--SPAYSPTS-PSYSPTSPS 1682
Query: 430 ------GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1720
Score = 74.7 bits (182), Expect = 4e-12
Identities = 49/114 (42%), Positives = 59/114 (51%), Gaps = 23/114 (20%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP A+SP+S PGYSP+SP
Sbjct: 1687 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPAYSPTS-PGYSPTSPS 1738
Query: 433 YSPTSPGYSPTSPGYSP-----------------------TSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+P TSP YSPTSPTYSP
Sbjct: 1739 YSPTSPSYSPTSPSYNPSSAKYSPSHAYSPSSPRMTPYSQTSPSYSPTSPTYSP 1792
Score = 73.9 bits (180), Expect = 6e-12
Identities = 52/113 (46%), Positives = 58/113 (51%), Gaps = 22/113 (19%)
Frame = +1
Query: 253 TPARSPVSG----TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------ 402
+PA SP S T SP+Y SP S A++SP A+SPSS
Sbjct: 1722 SPAYSPTSPGYSPTSPSYSPTSPSY--SPTSPSYNPSSAKYSP---SHAYSPSSPRMTPY 1776
Query: 403 ---SPGYSPSSPGYSPTSPGYSPTSPGYSPT---------SPGYSPTSPTYSP 525
SP YSP+SP YSPTSP YS SP YSPT SP YSPTSP YSP
Sbjct: 1777 SQTSPSYSPTSPTYSPTSPSYSQPSPSYSPTSPFNTSGGPSPDYSPTSPNYSP 1829
Score = 67.0 bits (162), Expect = 8e-10
Identities = 44/95 (46%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S SP Y SP+ + S + SP + S S YSPSSP
Sbjct: 1715 SPSYSPTSPA---YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSHAYSPSSP 1771
Query: 430 G---YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YS TSP YSPTSP YSPTSP YS SP+YSP
Sbjct: 1772 RMTPYSQTSPSYSPTSPTYSPTSPSYSQPSPSYSP 1806
Score = 64.7 bits (156), Expect = 4e-09
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 18/109 (16%)
Frame = +1
Query: 253 TPARSPVSGTPYH--EGMMSPNYLLSPNM-RLSPMSDAQFSPYVGGMAFSPSSSPGYSPS 423
+P+ SP S + Y+ SP++ SP+ R++P S Q SP ++SP+S P YSP+
Sbjct: 1743 SPSYSPTSPS-YNPSSAKYSPSHAYSPSSPRMTPYS--QTSP-----SYSPTS-PTYSPT 1793
Query: 424 SPGYSPTSPGYSPTSP---------GYSPTSP------GYSPTSPTYSP 525
SP YS SP YSPTSP YSPTSP YSPT+P YSP
Sbjct: 1794 SPSYSQPSPSYSPTSPFNTSGGPSPDYSPTSPNYSPSGSYSPTAPGYSP 1842
Score = 54.7 bits (130), Expect = 4e-06
Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 12/104 (11%)
Frame = +1
Query: 220 PSYM-DGLEFGMTPARSPVSG--TPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMA 387
PSY ++ + A SP S TPY + SP+Y SP + S +Q SP +
Sbjct: 1751 PSYNPSSAKYSPSHAYSPSSPRMTPYSQ--TSPSYSPTSPTYSPTSPSYSQPSP-----S 1803
Query: 388 FSPSS--------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPG 495
+SP+S SP YSP+SP YSP S YSPT+PGYSP+S G
Sbjct: 1804 YSPTSPFNTSGGPSPDYSPTSPNYSP-SGSYSPTAPGYSPSSTG 1846
[10][TOP]
>UniRef100_A9TK89 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TK89_PHYPA
Length = 1646
Score = 293 bits (751), Expect = 4e-78
Identities = 142/181 (78%), Positives = 162/181 (89%), Gaps = 6/181 (3%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRNDTGP+MRCSFEETVDILLDAA YAE D L+GVTENIMLGQLAPIGTGD L+L
Sbjct: 1393 RHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLKGVTENIMLGQLAPIGTGDFGLHL 1452
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQ 360
N+ ML++AIELQLPS+ +G ++GMTP+RSP+ GTP++EGMMSP+YLLSP++R SP+S+AQ
Sbjct: 1453 NENMLQHAIELQLPSF-EGTDYGMTPSRSPMIGTPHNEGMMSPSYLLSPSLRASPLSEAQ 1511
Query: 361 FSPYVGGMAFSPS------SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
FSPYVG M FSPS SSPGYSP SPGYSPTSPGYSPTSPGYSPTSPGYSPTSP+YS
Sbjct: 1512 FSPYVGSMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYS 1571
Query: 523 P 525
P
Sbjct: 1572 P 1572
Score = 54.7 bits (130), Expect = 4e-06
Identities = 35/78 (44%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPS 423
G +P S T SP Y SP+ + S A SP ++SP+S P YSP+
Sbjct: 1562 GYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPTSP-----SYSPTS-PSYSPT 1615
Query: 424 SPGYSPTSPGYSPTSPGY 477
SP YSPTSP YSPTSP Y
Sbjct: 1616 SPSYSPTSPSYSPTSPAY 1633
[11][TOP]
>UniRef100_Q4QZ03 DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum tuberosum
RepID=Q4QZ03_SOLTU
Length = 361
Score = 293 bits (750), Expect = 5e-78
Identities = 139/160 (86%), Positives = 151/160 (94%), Gaps = 1/160 (0%)
Frame = +1
Query: 49 FEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYLNDEMLKNAIELQLPSY 228
FEETVDILLDAA +AE+D LRGVTENIMLGQLAPIGTG C LYLN+EMLK AIE+ LPSY
Sbjct: 1 FEETVDILLDAAVFAESDHLRGVTENIMLGQLAPIGTGSCSLYLNEEMLKQAIEIPLPSY 60
Query: 229 MDG-LEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSS 405
M+G LEFGMTP RSP+SGTPYH+GMMSPNYLLSPNMR+SP++DAQFSPYVGGMAFSP+SS
Sbjct: 61 MEGGLEFGMTPGRSPISGTPYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAFSPTSS 120
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
PGYSPSSPGYSP+SPGYSPTSPGYSPTSPGYSPTSP YSP
Sbjct: 121 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSP 160
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 60/91 (65%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S P + + P+Y SP + + +SP ++SP+S P YSP+ P
Sbjct: 225 SPAYSPTS--PAYSPTL-PSY--SPTLPSYSPTSPSYSPT--SPSYSPTS-PSYSPTFPA 276
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSPGYSPTSP YSPTSP YSPTSP+Y+P
Sbjct: 277 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNP 307
Score = 83.2 bits (204), Expect = 1e-14
Identities = 48/91 (52%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + + +SP ++SP+S P YSP+SP
Sbjct: 218 SPAYSPTSPA---YSPTSPAY--SPTLPSYSPTLPSYSPT--SPSYSPTS-PSYSPTSPS 269
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPT P YSPTSPGYSPTSP YSPTSP+YSP
Sbjct: 270 YSPTFPAYSPTSPGYSPTSPSYSPTSPSYSP 300
Score = 82.0 bits (201), Expect = 2e-14
Identities = 46/93 (49%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 TPARSPVSGT--PYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
+P SP S T P G + SP + +SP ++SP+S P YSP+S
Sbjct: 155 SPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPT--SSSYSPTS-PSYSPTS 211
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPT P+YSP
Sbjct: 212 PIYSPTSPAYSPTSPAYSPTSPAYSPTLPSYSP 244
Score = 80.5 bits (197), Expect = 7e-14
Identities = 45/93 (48%), Positives = 53/93 (56%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP +SP+S P YSP+S
Sbjct: 171 GYSPTSPAYSPTSPSYSPTSPSY--SPTSSSYSPTSPSYSPT--SPIYSPTS-PAYSPTS 225
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPT P YSPT P YSPTSP+YSP
Sbjct: 226 PAYSPTSPAYSPTLPSYSPTLPSYSPTSPSYSP 258
Score = 79.7 bits (195), Expect = 1e-13
Identities = 47/93 (50%), Positives = 56/93 (60%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y +P+ R SP +A+SP+S P SPSS
Sbjct: 283 GYSPTSPSYSPTSPSYSPTSPSY--NPSARYSP-----------SLAYSPTS-PKLSPSS 328
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SP YSPTSP YSPTSP YSP+SPTYSP
Sbjct: 329 P-YSPSSPSYSPTSPSYSPTSPSYSPSSPTYSP 360
Score = 71.6 bits (174), Expect = 3e-11
Identities = 54/128 (42%), Positives = 64/128 (50%), Gaps = 25/128 (19%)
Frame = +1
Query: 217 LPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSP 396
LPSY L P+ SP S + SP+Y SP S + +SP A+SP
Sbjct: 239 LPSYSPTL-----PSYSPTSPS---YSPTSPSY--------SPTSPS-YSPTFP--AYSP 279
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPG-------------------------YSPTSPGYS 501
+S PGYSP+SP YSPTSP YSPTSP YSP+SP YS
Sbjct: 280 TS-PGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSLAYSPTSPKLSPSSPYSPSSPSYS 338
Query: 502 PTSPTYSP 525
PTSP+YSP
Sbjct: 339 PTSPSYSP 346
[12][TOP]
>UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U396_PHYPA
Length = 1742
Score = 290 bits (743), Expect = 3e-77
Identities = 139/175 (79%), Positives = 160/175 (91%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRNDTGP+MRCSFEETVDILLDAA YAE D L+GVTENIMLGQLAPIGTGD L+L
Sbjct: 1408 RHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLKGVTENIMLGQLAPIGTGDFGLHL 1467
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQ 360
N++ML++AIELQLPS+ + ++GMTP+R+P+ GTP+++GMMSP+YLLSP++R SP+SDAQ
Sbjct: 1468 NEDMLQHAIELQLPSF-EATDYGMTPSRTPMIGTPHNDGMMSPSYLLSPSLRASPLSDAQ 1526
Query: 361 FSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
FSPYVG M FSP SSPGYSPSSPGYSP SPGYSPTSPGYSPTSPGYSPTSP YSP
Sbjct: 1527 FSPYVGNMPFSP-SSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSP 1580
Score = 85.5 bits (210), Expect = 2e-15
Identities = 49/97 (50%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP A+SP+S SP Y
Sbjct: 1624 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPAYSPTSPSYAPTSPAY 1676
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSPGYSPTSP YSP+SP YSPTSP+YSP
Sbjct: 1677 SPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSP 1713
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/91 (51%), Positives = 59/91 (64%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1617 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PAYSPTSPS 1668
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSPGYSPTSP+YSP
Sbjct: 1669 YAPTSPAYSPTSPSYSPTSPGYSPTSPSYSP 1699
Score = 85.1 bits (209), Expect = 3e-15
Identities = 50/92 (54%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SP + S A SP A+SP+S P YSP+SP
Sbjct: 1638 SPSYSPTSPS---YSPTSPSYSPTSPAYSPTSPSYAPTSP-----AYSPTS-PSYSPTSP 1688
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
GYSPTSP YSP+SP YSPTSP YSPTSP YSP
Sbjct: 1689 GYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSP 1720
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S SP+Y +P + +SP G +SP+S P YSPSSP
Sbjct: 1652 SPSYSPTSPA---YSPTSPSY--APTSPAYSPTSPSYSPTSPG--YSPTS-PSYSPSSPS 1703
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP+YSP
Sbjct: 1704 YSPTSPSYSPTSPAYSPTSPRYSPSSPSYSP 1734
Score = 77.8 bits (190), Expect = 4e-13
Identities = 47/92 (51%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS---SSPGYSPS 423
+PA SP S + SP Y SP S + G SPS SSP YSP+
Sbjct: 1659 SPAYSPTSPS---YAPTSPAY--------SPTSPSYSPTSPGYSPTSPSYSPSSPSYSPT 1707
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY 519
SP YSPTSP YSPTSP YSP+SP YSPTSP+Y
Sbjct: 1708 SPSYSPTSPAYSPTSPRYSPSSPSYSPTSPSY 1739
Score = 72.4 bits (176), Expect = 2e-11
Identities = 46/100 (46%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1584 GYSPTSPSYSPTSPGYSPTSPSY--SPTSPSYAPTSPSYSPT--SPSYSPTS-PSYSPTS 1638
Query: 427 P-------GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP Y+PTSP YSP
Sbjct: 1639 PSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSP 1678
[13][TOP]
>UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351
Length = 2085
Score = 263 bits (673), Expect = 4e-69
Identities = 142/214 (66%), Positives = 157/214 (73%), Gaps = 39/214 (18%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRNDTGPLMRCSFEETVDILLDAA YAE+D LRGV+ENIMLGQLAPIGTG C+LYL
Sbjct: 1407 RHGINRNDTGPLMRCSFEETVDILLDAAVYAESDPLRGVSENIMLGQLAPIGTGGCDLYL 1466
Query: 181 NDEMLKNAIELQLPSYMDGLEFG-MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSD 354
ND+MLK AIELQLPSY++GL+FG MT A SP+SGTPYH+GMMSP+YLLSP++R SP +D
Sbjct: 1467 NDQMLKQAIELQLPSYVEGLDFGMMTSACSPISGTPYHQGMMSPSYLLSPDIRASPTAAD 1526
Query: 355 AQFSPYVGGMAFSPSSSPG-----------------------------YSPSSPGYSP-- 441
AQFSPYVGGMAFSP SSPG Y+P SP YSP
Sbjct: 1527 AQFSPYVGGMAFSPVSSPGNYTPSSGGGYSPSPPVCTPGPGSFTSSSPYNPVSPFYSPAS 1586
Query: 442 ------TSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
TSP Y PTS +SPTSP YS TSP YSP
Sbjct: 1587 PLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSP 1620
Score = 89.4 bits (220), Expect = 1e-16
Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+P+ SP S + Y SP+Y SP+ SP S + +SP ++SP+S SP
Sbjct: 1673 SPSYSPTSPS-YSYSPTSPSYSPTSPSYNYSPTSPS-YSPT--SPSYSPTSPSYSPTSPS 1728
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTS YSPTSP YSPTSPGYSPTSP+YSP
Sbjct: 1729 YSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSP 1766
Score = 78.2 bits (191), Expect = 3e-13
Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVG--GMAFSPSSSPGYSPS 423
+P+ SP S + Y+ SP+Y SP+ + S + SP ++SP+SS YSP+
Sbjct: 1689 SPSYSPTSPS-YNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSS-AYSPT 1746
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSPGYSPTSP YSP+SP Y+P+S Y+P
Sbjct: 1747 SPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTP 1780
Score = 73.9 bits (180), Expect = 6e-12
Identities = 42/93 (45%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLS--PNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPS 423
++P SP S P + SP+Y+ + P+ SP+ A Y +S YSP+
Sbjct: 1578 VSPFYSPAS--PLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPT 1635
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
SP YSPTSP Y+PTS YSPTSP Y+PTSP+YS
Sbjct: 1636 SPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYS 1668
Score = 73.9 bits (180), Expect = 6e-12
Identities = 40/66 (60%), Positives = 48/66 (72%), Gaps = 4/66 (6%)
Frame = +1
Query: 340 SPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYS--PTSPGYSPTSPGY--SPTSPGYSPT 507
SP S + ++P ++SP+S P YSP+SP YS PTSP YSPTSP Y SPTSP YSPT
Sbjct: 1654 SPTSPS-YNPTSPSYSYSPTS-PSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPT 1711
Query: 508 SPTYSP 525
SP+YSP
Sbjct: 1712 SPSYSP 1717
Score = 62.8 bits (151), Expect = 1e-08
Identities = 43/105 (40%), Positives = 55/105 (52%), Gaps = 14/105 (13%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP G +SP+S P YSPSSP
Sbjct: 1719 SPSYSPTSPS---YSPTSPSY--SPTSSAYSPTSPAYSPTSPG--YSPTS-PSYSPSSPS 1770
Query: 433 YSPTSPGYSP--------------TSPGYSPTSPGYSPTSPTYSP 525
Y+P+S Y+P TSP YSPTSP YS SP+YSP
Sbjct: 1771 YNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSP 1815
Score = 57.0 bits (136), Expect = 8e-07
Identities = 38/86 (44%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S S T SP Y SP S ++P + ++PS + YSPSSP
Sbjct: 1737 SPTSSAYSPTSPAYSPTSPGY--SPTSPSYSPSSPSYNP--SSVKYTPSHA--YSPSSPN 1790
Query: 433 Y-SPTSPGYSPTSPGYSPTSPGYSPT 507
Y S TSP YSPTSP YS SP YSPT
Sbjct: 1791 YYSSTSPTYSPTSPSYSQPSPSYSPT 1816
[14][TOP]
>UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q5WMZ9_ORYSJ
Length = 1741
Score = 263 bits (673), Expect = 4e-69
Identities = 142/214 (66%), Positives = 157/214 (73%), Gaps = 39/214 (18%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRNDTGPLMRCSFEETVDILLDAA YAE+D LRGV+ENIMLGQLAPIGTG C+LYL
Sbjct: 1354 RHGINRNDTGPLMRCSFEETVDILLDAAVYAESDPLRGVSENIMLGQLAPIGTGGCDLYL 1413
Query: 181 NDEMLKNAIELQLPSYMDGLEFG-MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSD 354
ND+MLK AIELQLPSY++GL+FG MT A SP+SGTPYH+GMMSP+YLLSP++R SP +D
Sbjct: 1414 NDQMLKQAIELQLPSYVEGLDFGMMTSACSPISGTPYHQGMMSPSYLLSPDIRASPTAAD 1473
Query: 355 AQFSPYVGGMAFSPSSSPG-----------------------------YSPSSPGYSP-- 441
AQFSPYVGGMAFSP SSPG Y+P SP YSP
Sbjct: 1474 AQFSPYVGGMAFSPVSSPGNYTPSSGGGYSPSPPVCTPGPGSFTSSSPYNPVSPFYSPAS 1533
Query: 442 ------TSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
TSP Y PTS +SPTSP YS TSP YSP
Sbjct: 1534 PLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSP 1567
Score = 89.4 bits (220), Expect = 1e-16
Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+P+ SP S + Y SP+Y SP+ SP S + +SP ++SP+S SP
Sbjct: 1620 SPSYSPTSPS-YSYSPTSPSYSPTSPSYNYSPTSPS-YSPT--SPSYSPTSPSYSPTSPS 1675
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTS YSPTSP YSPTSPGYSPTSP+YSP
Sbjct: 1676 YSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSP 1713
Score = 78.2 bits (191), Expect = 3e-13
Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVG--GMAFSPSSSPGYSPS 423
+P+ SP S + Y+ SP+Y SP+ + S + SP ++SP+SS YSP+
Sbjct: 1636 SPSYSPTSPS-YNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSS-AYSPT 1693
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSPGYSPTSP YSP+SP Y+P+S Y+P
Sbjct: 1694 SPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTP 1727
Score = 73.9 bits (180), Expect = 6e-12
Identities = 42/93 (45%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLS--PNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPS 423
++P SP S P + SP+Y+ + P+ SP+ A Y +S YSP+
Sbjct: 1525 VSPFYSPAS--PLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPT 1582
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
SP YSPTSP Y+PTS YSPTSP Y+PTSP+YS
Sbjct: 1583 SPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYS 1615
Score = 73.9 bits (180), Expect = 6e-12
Identities = 40/66 (60%), Positives = 48/66 (72%), Gaps = 4/66 (6%)
Frame = +1
Query: 340 SPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYS--PTSPGYSPTSPGY--SPTSPGYSPT 507
SP S + ++P ++SP+S P YSP+SP YS PTSP YSPTSP Y SPTSP YSPT
Sbjct: 1601 SPTSPS-YNPTSPSYSYSPTS-PSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPT 1658
Query: 508 SPTYSP 525
SP+YSP
Sbjct: 1659 SPSYSP 1664
Score = 62.4 bits (150), Expect = 2e-08
Identities = 42/107 (39%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Frame = +1
Query: 220 PSYMD-GLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSP 396
PSY + +P S T SP+Y SP + +SP A+SP
Sbjct: 1637 PSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPT--SSAYSP 1692
Query: 397 SS------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY 519
+S SPGYSP+SP YSP+SP Y+P+S Y+P S YSP+SP Y
Sbjct: 1693 TSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTP-SHAYSPSSPNY 1738
[15][TOP]
>UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DKN9_ORYSJ
Length = 1834
Score = 263 bits (673), Expect = 4e-69
Identities = 142/214 (66%), Positives = 157/214 (73%), Gaps = 39/214 (18%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRNDTGPLMRCSFEETVDILLDAA YAE+D LRGV+ENIMLGQLAPIGTG C+LYL
Sbjct: 1407 RHGINRNDTGPLMRCSFEETVDILLDAAVYAESDPLRGVSENIMLGQLAPIGTGGCDLYL 1466
Query: 181 NDEMLKNAIELQLPSYMDGLEFG-MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSD 354
ND+MLK AIELQLPSY++GL+FG MT A SP+SGTPYH+GMMSP+YLLSP++R SP +D
Sbjct: 1467 NDQMLKQAIELQLPSYVEGLDFGMMTSACSPISGTPYHQGMMSPSYLLSPDIRASPTAAD 1526
Query: 355 AQFSPYVGGMAFSPSSSPG-----------------------------YSPSSPGYSP-- 441
AQFSPYVGGMAFSP SSPG Y+P SP YSP
Sbjct: 1527 AQFSPYVGGMAFSPVSSPGNYTPSSGGGYSPSPPVCTPGPGSFTSSSPYNPVSPFYSPAS 1586
Query: 442 ------TSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
TSP Y PTS +SPTSP YS TSP YSP
Sbjct: 1587 PLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSP 1620
Score = 89.4 bits (220), Expect = 1e-16
Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+P+ SP S + Y SP+Y SP+ SP S + +SP ++SP+S SP
Sbjct: 1673 SPSYSPTSPS-YSYSPTSPSYSPTSPSYNYSPTSPS-YSPT--SPSYSPTSPSYSPTSPS 1728
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTS YSPTSP YSPTSPGYSPTSP+YSP
Sbjct: 1729 YSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSP 1766
Score = 78.2 bits (191), Expect = 3e-13
Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVG--GMAFSPSSSPGYSPS 423
+P+ SP S + Y+ SP+Y SP+ + S + SP ++SP+SS YSP+
Sbjct: 1689 SPSYSPTSPS-YNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSS-AYSPT 1746
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSPGYSPTSP YSP+SP Y+P+S Y+P
Sbjct: 1747 SPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTP 1780
Score = 73.9 bits (180), Expect = 6e-12
Identities = 42/93 (45%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLS--PNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPS 423
++P SP S P + SP+Y+ + P+ SP+ A Y +S YSP+
Sbjct: 1578 VSPFYSPAS--PLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPT 1635
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
SP YSPTSP Y+PTS YSPTSP Y+PTSP+YS
Sbjct: 1636 SPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYS 1668
Score = 73.9 bits (180), Expect = 6e-12
Identities = 40/66 (60%), Positives = 48/66 (72%), Gaps = 4/66 (6%)
Frame = +1
Query: 340 SPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYS--PTSPGYSPTSPGY--SPTSPGYSPT 507
SP S + ++P ++SP+S P YSP+SP YS PTSP YSPTSP Y SPTSP YSPT
Sbjct: 1654 SPTSPS-YNPTSPSYSYSPTS-PSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPT 1711
Query: 508 SPTYSP 525
SP+YSP
Sbjct: 1712 SPSYSP 1717
Score = 62.8 bits (151), Expect = 1e-08
Identities = 43/105 (40%), Positives = 55/105 (52%), Gaps = 14/105 (13%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP G +SP+S P YSPSSP
Sbjct: 1719 SPSYSPTSPS---YSPTSPSY--SPTSSAYSPTSPAYSPTSPG--YSPTS-PSYSPSSPS 1770
Query: 433 YSPTSPGYSP--------------TSPGYSPTSPGYSPTSPTYSP 525
Y+P+S Y+P TSP YSPTSP YS SP+YSP
Sbjct: 1771 YNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPTSPSYSQPSPSYSP 1815
Score = 58.5 bits (140), Expect = 3e-07
Identities = 39/87 (44%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S S T SP Y SP S ++P + ++PS + YSPSSP
Sbjct: 1737 SPTSSAYSPTSPAYSPTSPGY--SPTSPSYSPSSPSYNP--SSVKYTPSHA--YSPSSPN 1790
Query: 433 Y-SPTSPGYSPTSPGYSPTSPGYSPTS 510
Y S TSP YSPTSP YS SP YSPTS
Sbjct: 1791 YYSSTSPTYSPTSPSYSQPSPSYSPTS 1817
[16][TOP]
>UniRef100_C5Y387 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Y387_SORBI
Length = 1874
Score = 232 bits (592), Expect = 1e-59
Identities = 127/210 (60%), Positives = 146/210 (69%), Gaps = 35/210 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRNDTGPLMRCSFEETVDILLDAA +AE+D LRGVTENIMLGQLAPIGTG C L+L
Sbjct: 1406 RHGINRNDTGPLMRCSFEETVDILLDAAVHAESDYLRGVTENIMLGQLAPIGTGGCSLFL 1465
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMT----PARSPVSGTPYHEGMMSPNYLLSPNMRLSPM 348
ND+ML+ AIELQLPSY+DGL+FG+T P SP+SG+ YHEG+MS ++LLSP+ R SP+
Sbjct: 1466 NDQMLQQAIELQLPSYVDGLDFGITSAPSPLSSPLSGSSYHEGLMSSSHLLSPDFRHSPI 1525
Query: 349 SD-AQFSPYVGGMAFSP-SSSPGYSP---SSPGYSP------------------------ 441
A FSPYV M+ SP S GYSP S GYSP
Sbjct: 1526 DTYASFSPYVRDMSLSPVPSQGGYSPIPRSESGYSPIPRSVRYMAVSPIYTPYNAASPVN 1585
Query: 442 --TSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
TS Y+P SP YSPT+P Y+P SP YSP
Sbjct: 1586 ASTSTSYTPVSPVYSPTTPVYTPMSPVYSP 1615
Score = 89.0 bits (219), Expect = 2e-16
Identities = 51/102 (50%), Positives = 60/102 (58%), Gaps = 11/102 (10%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-----LSPNMRLSPMSDAQFSPYVGGMAFSPSS----- 402
+PA + S T SP+Y SP + +SP +++SP+S
Sbjct: 1660 SPASASYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSP--ASLSYSPTSPFYSP 1717
Query: 403 -SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPSSP YSPTSP YSPTS GYSPTSPGYSPTSPTYSP
Sbjct: 1718 TSPSYSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPTSPTYSP 1759
Score = 84.3 bits (207), Expect = 5e-15
Identities = 50/94 (53%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVG--GMAFSPSSSPGYSPS 423
+P+ SP S SP Y SP+ + +S + SP+ ++SPSS P YSP+
Sbjct: 1677 SPSYSPAS---LSYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPSS-PSYSPT 1732
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTS GYSPTSPGYSPTSP YSPTSP YSP
Sbjct: 1733 SPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNYSP 1766
Score = 77.0 bits (188), Expect = 7e-13
Identities = 47/101 (46%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Frame = +1
Query: 265 SPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSS------------- 402
+PVS SP Y +SPN S FSP ++SP+S
Sbjct: 1617 TPVSSQIQSYSSASPIYNPISPNSSRYNPSSPSFSPTSTSPSYSPASASYSPTSPFYSPT 1676
Query: 403 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSP+S YSPTSP YSPTSP YSP S YSPTSP YSP
Sbjct: 1677 SPSYSPASLSYSPTSPFYSPTSPSYSPASLSYSPTSPFYSP 1717
Score = 69.7 bits (169), Expect = 1e-10
Identities = 50/131 (38%), Positives = 58/131 (44%), Gaps = 40/131 (30%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-----LSPNMRLSPMSDAQFSPYVGGMAFSPSS----- 402
+PA S T SP+Y SP + +SP ++SP+S
Sbjct: 1681 SPASLSYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSP--SSPSYSPTSPTYSP 1738
Query: 403 -SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPG---------------------------- 495
S GYSP+SPGYSPTSP YSPTSP YSPTSP
Sbjct: 1739 TSLGYSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLSYTEYNSSNTYSPTRPRITLDSQAP 1798
Query: 496 -YSPTSPTYSP 525
YSPTSPTYSP
Sbjct: 1799 DYSPTSPTYSP 1809
Score = 57.4 bits (137), Expect = 6e-07
Identities = 43/108 (39%), Positives = 51/108 (47%), Gaps = 17/108 (15%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSP-GYSPSSP 429
+P SP S T SPNY SP SP + ++ Y +SP+ +P
Sbjct: 1747 SPGYSPTSPT---YSPTSPNY--SPT---SPSYNLSYTEYNSSNTYSPTRPRITLDSQAP 1798
Query: 430 GYSPTSPGYSPTSPGYS----------PT------SPGYSPTSPTYSP 525
YSPTSP YSPTSP YS PT SP YSPTSP +SP
Sbjct: 1799 DYSPTSPTYSPTSPSYSLPSLSYSPNRPTDDSGRPSPDYSPTSPNFSP 1846
[17][TOP]
>UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1EA31_9CHLO
Length = 1720
Score = 210 bits (535), Expect = 4e-53
Identities = 108/178 (60%), Positives = 129/178 (72%), Gaps = 3/178 (1%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR +TGPLMRCSFEETVDILL+AAA++E D + G++ENIMLGQ P+GTG+ L+L
Sbjct: 1390 RHGINRVETGPLMRCSFEETVDILLEAAAFSERDGMNGLSENIMLGQFCPLGTGEFGLHL 1449
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA- 357
N++MLK A++L L GL G+TP R TP EG MSP++LLSP +SP D+
Sbjct: 1450 NEDMLKEAVDLDLGLSEGGLGVGVTPGRGI---TPGREGAMSPSFLLSPTAHMSPFDDSM 1506
Query: 358 QFSPYVG--GMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+FSP G SPGYSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1507 RFSPQGTDYGSHAGGGQSPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1564
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1559 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1610
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1611 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1641
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1566 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1617
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1618 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1648
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1573 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1624
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1625 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1655
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1580 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1631
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1632 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1662
Score = 84.0 bits (206), Expect = 6e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1587 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1638
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1639 YSPTSPAYSPTSPAYSPTSPAYSPTSPQYSP 1669
Score = 83.2 bits (204), Expect = 1e-14
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1594 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1645
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1646 YSPTSPAYSPTSPAYSPTSPQYSPTSPQYSP 1676
Score = 82.4 bits (202), Expect = 2e-14
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1601 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1652
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1653 YSPTSPAYSPTSPQYSPTSPQYSPTSPQYSP 1683
Score = 81.6 bits (200), Expect = 3e-14
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1608 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1659
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1660 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1690
Score = 72.4 bits (176), Expect = 2e-11
Identities = 49/99 (49%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1615 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPQ 1666
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTS--------PTYSP 525
YSPTSP YSPTSP YSPTSP YSPTS PT SP
Sbjct: 1667 YSPTSPQYSPTSPQYSPTSPQYSPTSLGLSDADAPTRSP 1705
Score = 58.2 bits (139), Expect = 4e-07
Identities = 43/101 (42%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1622 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PQYSPTSPQ 1673
Query: 433 YSPTSPGYSPTSPGYSPTS---------------PGYSPTS 510
YSPTSP YSPTSP YSPTS P YSP++
Sbjct: 1674 YSPTSPQYSPTSPQYSPTSLGLSDADAPTRSPTSPQYSPST 1714
[18][TOP]
>UniRef100_A4S3M0 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S3M0_OSTLU
Length = 1646
Score = 207 bits (526), Expect = 5e-52
Identities = 112/183 (61%), Positives = 132/183 (72%), Gaps = 8/183 (4%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR +TGPLMRCSFEETVDIL++A+A++E D + G +ENIMLGQ PIGTG+ +L+L
Sbjct: 1382 RHGINRVETGPLMRCSFEETVDILMEASAFSERDNMTGPSENIMLGQFCPIGTGEFKLHL 1441
Query: 181 NDEMLKNAIELQL---PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMS 351
NDE+L++A+EL+L S G MTP R GTP G SP++LLSP SP
Sbjct: 1442 NDELLQDAVELELFGDGSRTPGHGGMMTPGR---DGTP-GWGSKSPSFLLSPGGHQSPFD 1497
Query: 352 DAQ-FSPYVGGMAFSPSSSP----GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT 516
+ FSPY GMAFSP SP GYSP+SP YSPTSP YSPTSP YSPTSP YSPTSP
Sbjct: 1498 TSMAFSPYSDGMAFSPGMSPGGFGGYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA 1557
Query: 517 YSP 525
YSP
Sbjct: 1558 YSP 1560
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1555 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1606
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1607 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1637
[19][TOP]
>UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MI48_9CHLO
Length = 1694
Score = 204 bits (520), Expect = 2e-51
Identities = 111/191 (58%), Positives = 133/191 (69%), Gaps = 16/191 (8%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR +TGPLMRCSFEETVDIL++AAA+AE D + G++ENIMLGQ P+GTG+ L+L
Sbjct: 1391 RHGINRVETGPLMRCSFEETVDILMEAAAFAERDRMSGLSENIMLGQFCPLGTGEFGLHL 1450
Query: 181 NDEMLKNAIELQLPSY-MDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA 357
N+++LK A++L L ++ D L G TPAR TP G SP++LLSP SP D
Sbjct: 1451 NEDVLKEAVDLDLTTHSADALGAGTTPARGT---TPGGVGSASPSFLLSPQAHASPFDDT 1507
Query: 358 -QFSPYV---------GGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYS-----PTSP 492
+FSPY GM FSP +SPGYSP+SP YSPTSP YSPTSP YS PTSP
Sbjct: 1508 MRFSPYTEGGGGGGGGDGMGFSP-TSPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAPTSP 1566
Query: 493 GYSPTSPTYSP 525
YSPTSP YSP
Sbjct: 1567 AYSPTSPAYSP 1577
Score = 74.7 bits (182), Expect = 4e-12
Identities = 50/119 (42%), Positives = 59/119 (49%), Gaps = 17/119 (14%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSG--TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFS 393
P+Y +PA SP S +P + SP + +SP A+S
Sbjct: 1554 PAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT--SPAYS 1611
Query: 394 PSS------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTS---------PTYSP 525
P+S SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTS PT SP
Sbjct: 1612 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSVGLSDVENAPTRSP 1670
Score = 65.9 bits (159), Expect = 2e-09
Identities = 46/107 (42%), Positives = 53/107 (49%), Gaps = 16/107 (14%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1586 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1637
Query: 433 YSPTSPGYSPTSPGYSPTS----------------PGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTS P YSPT +SP
Sbjct: 1638 YSPTSPAYSPTSPQYSPTSVGLSDVENAPTRSPTSPQYSPTEGAFSP 1684
Score = 53.9 bits (128), Expect = 7e-06
Identities = 41/104 (39%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1593 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1644
Query: 433 YSPTSPGYSPTS----------------PGYSPTSPGYSPTSPT 516
YSPTSP YSPTS P YSPT +SP T
Sbjct: 1645 YSPTSPQYSPTSVGLSDVENAPTRSPTSPQYSPTEGAFSPMETT 1688
[20][TOP]
>UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IRZ2_CHLRE
Length = 1789
Score = 189 bits (481), Expect = 8e-47
Identities = 99/182 (54%), Positives = 122/182 (67%), Gaps = 7/182 (3%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRN GP+ +CSFEETVDIL AA + E D L GV++NIM+G + P+GTG +L L
Sbjct: 1407 RHGINRNGNGPMTQCSFEETVDILYRAAMFGERDKLMGVSDNIMMGNMCPLGTGSFDLLL 1466
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYH-EGMMSPNYLLSP------NMRL 339
++ L++A ++Q+ + G ++ MTP R S +P G MSP++LLSP
Sbjct: 1467 DESALESAFDVQIGNLAFGEDYTMTPGRMTPSRSPARTPGPMSPSHLLSPMHSPFVGSGF 1526
Query: 340 SPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY 519
SPM FSP GG P SPGYSP+SPGYSPTSP YSPTSP YSPTSP YSPTSP Y
Sbjct: 1527 SPMHPGAFSPAHGGGVGGP-MSPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAY 1585
Query: 520 SP 525
SP
Sbjct: 1586 SP 1587
Score = 80.5 bits (197), Expect = 7e-14
Identities = 49/94 (52%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS---SPGYSPS 423
+PA SP S SP Y SP + +SP A+SP+S SP YSP+
Sbjct: 1610 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTSPAYSPAYSPT 1662
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSP SPTSP YSPTSP YSPTSP YSP
Sbjct: 1663 SPQYSPTSPSMSPTSPRYSPTSPNYSPTSPNYSP 1696
Score = 67.8 bits (164), Expect = 4e-10
Identities = 42/86 (48%), Positives = 50/86 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1624 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSP-----AYSPTS-PQYSPTSPS 1672
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTS 510
SPTSP YSPTSP YSPTSP YSP++
Sbjct: 1673 MSPTSPRYSPTSPNYSPTSPNYSPST 1698
[21][TOP]
>UniRef100_UPI00005A0B1F PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 10 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1F
Length = 1840
Score = 189 bits (479), Expect = 1e-46
Identities = 103/186 (55%), Positives = 126/186 (67%), Gaps = 11/186 (5%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1409 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1468
Query: 181 NDEMLKNAIEL--QLPSY----MDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLS 342
+ E K +E+ +P DG G +PA SP G+P G SP Y+ SP S
Sbjct: 1469 DAEKCKYGMEIPTNIPGLGAAGRDGFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGELYS 1527
Query: 343 PMSDAQFSPYVGGM-----AFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPT 507
P S A GG ++SP +SP YSP+SP YSPTSP YSPTSP YSPTSP YSPT
Sbjct: 1528 PTSPAYEPRSPGGYTPQSPSYSP-TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPT 1586
Query: 508 SPTYSP 525
SP+YSP
Sbjct: 1587 SPSYSP 1592
Score = 84.7 bits (208), Expect = 4e-15
Identities = 52/98 (53%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLS-PNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+P+ SP S + SPNY S PN + S + SP ++SP+S SP
Sbjct: 1664 SPSYSPTSPS---YSPTSPNYSPSRPNYTPTSPSYSPTSP-----SYSPTSPKYTPTSPS 1715
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1716 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1753
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1580 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1631
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1632 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1662
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1587 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1638
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1639 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1669
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1594 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1645
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1676
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1601 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1652
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1653 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1683
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1615 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1666
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1667 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1697
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1622 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1673
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1674 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1704
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1724 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1771
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1772 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1802
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1748 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1792
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1793 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1825
[22][TOP]
>UniRef100_UPI00005A0B1E PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 9 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1E
Length = 1851
Score = 187 bits (475), Expect = 4e-46
Identities = 100/181 (55%), Positives = 123/181 (67%), Gaps = 6/181 (3%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1409 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1468
Query: 181 NDEMLKNAIEL--QLPSY----MDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLS 342
+ E K +E+ +P DG G +PA SP G+P G SP Y+ SP +S
Sbjct: 1469 DAEKCKYGMEIPTNIPGLGAAGRDGFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMS 1527
Query: 343 PMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
P +SP A+ P S GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YS
Sbjct: 1528 P----SYSP--TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYS 1581
Query: 523 P 525
P
Sbjct: 1582 P 1582
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1584 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1635
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1666
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1591 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1642
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1673
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1598 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1649
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1680
Score = 84.0 bits (206), Expect = 6e-15
Identities = 52/100 (52%), Positives = 61/100 (61%), Gaps = 9/100 (9%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLS-PNMRLSPMSDAQFSPYVG--GMAFSPSS------S 405
+P+ SP S + SPNY S PN + S + SP ++SP+S S
Sbjct: 1668 SPSYSPTSPS---YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPSSPSYSPTSPKYTPTS 1724
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1725 PSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1764
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1605 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1656
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1687
Score = 81.6 bits (200), Expect = 3e-14
Identities = 47/97 (48%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+R + T SP+Y SP+ + +++P ++SPSS SP Y
Sbjct: 1686 SPSRPNYTPTSPSYSPTSPSY--SPSSPSYSPTSPKYTPT--SPSYSPSSPEYTPTSPKY 1741
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP
Sbjct: 1742 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1778
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1619 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1670
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1671 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1701
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1626 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1677
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1678 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1708
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1735 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1782
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1783 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1813
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1759 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1803
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1804 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1836
[23][TOP]
>UniRef100_UPI00005A0B1C PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 8 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1C
Length = 1719
Score = 186 bits (473), Expect = 7e-46
Identities = 99/177 (55%), Positives = 122/177 (68%), Gaps = 2/177 (1%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1407 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1466
Query: 181 NDEMLKNAIEL--QLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSD 354
+ E K +E+ +P G G +PA SP G+P G SP Y+ SP +SP
Sbjct: 1467 DAEKCKYGMEIPTNIPD-ASGFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSP--- 1521
Query: 355 AQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP A+ P S GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1522 -SYSP--TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1575
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1577 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1628
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1659
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1584 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1635
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1666
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1591 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1642
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1673
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1598 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1649
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1680
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1612 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1663
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1664 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1694
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1619 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1670
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1671 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1701
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/91 (48%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSPS P
Sbjct: 1633 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PNYSPSRPN 1684
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP Y+P SP YSP
Sbjct: 1685 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSP 1715
Score = 70.1 bits (170), Expect = 9e-11
Identities = 41/87 (47%), Positives = 51/87 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP +SPS P Y+P+SP
Sbjct: 1640 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPSR-PNYTPTSPS 1691
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSP 513
YSPTSP YSPTSP Y+P SP YSPTSP
Sbjct: 1692 YSPTSPSYSPTSPNYTPMSPNYSPTSP 1718
[24][TOP]
>UniRef100_UPI00005A0B1B PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 7 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1B
Length = 1858
Score = 186 bits (473), Expect = 7e-46
Identities = 99/177 (55%), Positives = 122/177 (68%), Gaps = 2/177 (1%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1407 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1466
Query: 181 NDEMLKNAIEL--QLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSD 354
+ E K +E+ +P G G +PA SP G+P G SP Y+ SP +SP
Sbjct: 1467 DAEKCKYGMEIPTNIPD-ASGFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSP--- 1521
Query: 355 AQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP A+ P S GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1522 -SYSP--TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1575
Score = 86.7 bits (213), Expect = 9e-16
Identities = 50/92 (54%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
TP S T SPNY +SPN + S + SP ++P+S P YSPSSP
Sbjct: 1686 TPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSP-----KYTPTS-PSYSPSSP 1739
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1740 EYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1771
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1577 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1628
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1659
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1584 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1635
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1666
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1591 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1642
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1673
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1598 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1649
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1680
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1612 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1663
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1664 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1694
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1619 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1670
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1671 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1701
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1742 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1789
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1790 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1820
Score = 77.4 bits (189), Expect = 6e-13
Identities = 44/91 (48%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP +SPS P Y+P+SP
Sbjct: 1640 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPSR-PNYTPTSPS 1691
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+P SP YSPTSP+YSP
Sbjct: 1692 YSPTSPSYSPTSPNYTPMSPNYSPTSPSYSP 1722
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1766 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1810
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1811 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1843
[25][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
discoideum RepID=RPB1_DICDI
Length = 1727
Score = 185 bits (470), Expect = 1e-45
Identities = 100/198 (50%), Positives = 128/198 (64%), Gaps = 23/198 (11%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR +TGPLMRCSFEETV+IL+DAA ++ETD ++GVTENI+LGQL P+GTG E++L
Sbjct: 1404 RHGINRVETGPLMRCSFEETVEILMDAAMFSETDDVKGVTENIILGQLPPLGTGSFEVFL 1463
Query: 181 NDEMLKNAIELQLP------------------SYMDGLEFGMTPARSPVSG--TPYHE-- 294
N +M+KNA + LP SY DG TP +P +P++E
Sbjct: 1464 NQDMIKNAHSIALPEPSNVSYPDTPGSQTPSYSYGDG---STTPFHNPYDAPLSPFNETF 1520
Query: 295 -GMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSP 471
G SP+ + SP + + + + +SP +SP YSP+SP YSPTSP YSPTSP
Sbjct: 1521 RGDFSPSAMNSPGYNANKSYGSSYQYFPQSPTYSP-TSPSYSPTSPSYSPTSPSYSPTSP 1579
Query: 472 GYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP+YSP
Sbjct: 1580 SYSPTSPSYSPTSPSYSP 1597
Score = 85.5 bits (210), Expect = 2e-15
Identities = 48/91 (52%), Positives = 60/91 (65%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S P++ SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1592 SPSYSPTS--PFYSPT-SPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1643
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1644 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1674
Score = 85.1 bits (209), Expect = 3e-15
Identities = 50/102 (49%), Positives = 59/102 (57%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
PSY F +P S T SP+Y SP + +SP ++SP+
Sbjct: 1593 PSYSPTSPF-YSPTSPSYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPT 1647
Query: 400 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1648 S-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1688
Score = 84.7 bits (208), Expect = 4e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1578 SPSYSPTSPS---YSPTSPSY--SPTSPFYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1629
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1630 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1660
Score = 80.9 bits (198), Expect = 5e-14
Identities = 45/91 (49%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1620 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1671
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+SP YSP+SP+YSP
Sbjct: 1672 YSPTSPSYSPTSPSYSPSSPSYSPSSPSYSP 1702
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1627 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1678
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+SP YSP+SP YSP+SP+YSP
Sbjct: 1679 YSPTSPSYSPSSPSYSPSSPSYSPSSPSYSP 1709
Score = 73.9 bits (180), Expect = 6e-12
Identities = 41/90 (45%), Positives = 57/90 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1634 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1685
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
YSP+SP YSP+SP YSP+SP YSP+SPT++
Sbjct: 1686 YSPSSPSYSPSSPSYSPSSPSYSPSSPTFT 1715
[26][TOP]
>UniRef100_Q8MX30 DNA-directed RNA polymerase (Fragment) n=1 Tax=Naegleria gruberi
RepID=Q8MX30_NAEGR
Length = 1590
Score = 182 bits (463), Expect = 1e-44
Identities = 107/201 (53%), Positives = 132/201 (65%), Gaps = 26/201 (12%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
R GINR+DTGPLMRCSFEETV+IL++AA +A+TD L+GV+ N+M+GQLAPIGTG LYL
Sbjct: 1371 RRGINRSDTGPLMRCSFEETVEILIEAATFADTDTLKGVSANVMVGQLAPIGTGCFGLYL 1430
Query: 181 NDEMLKNAIELQLPSY------MDGLEFGMTPARSPVSGTPYHEGMMSPNY--------- 315
++E+LK A+ ++ PS+ M G TP + TPYH G+ +P +
Sbjct: 1431 DEELLKQAVAVK-PSFVTETKSMYGSLGATTPYHTSGLATPYHGGVATPYHGGASSPWTQ 1489
Query: 316 -LLSPNMRL-SPMSDAQFSPYVGGMAFSP-SSSP-------GYSPSSPG-YSPTSPGYSP 462
++P R SP FSP AFSP +SSP GYSPSSPG YSPTSP YSP
Sbjct: 1490 GAMTPLGRTPSPEYQGGFSPSPYNSAFSPVASSPTSPGHQGGYSPSSPGNYSPTSPAYSP 1549
Query: 463 TSPGYSPTSPGYSPTSPTYSP 525
+SP YSPTSP YSPTSP YSP
Sbjct: 1550 SSPNYSPTSPAYSPTSPNYSP 1570
[27][TOP]
>UniRef100_B7G9I2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G9I2_PHATR
Length = 1706
Score = 182 bits (462), Expect = 1e-44
Identities = 98/198 (49%), Positives = 123/198 (62%), Gaps = 23/198 (11%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTGPL+R SFEETVD+L+DAA YAE + L+GVTENIM+GQLA +GTGD +L L
Sbjct: 1357 RHGINRVDTGPLLRASFEETVDMLMDAAVYAEEEILKGVTENIMMGQLARVGTGDVDLLL 1416
Query: 181 N-DEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSD- 354
+ D++++ A+E+ + + + GM TPY + + ++ SP D
Sbjct: 1417 DEDKVVREAVEVVVDEFAVDKDLGMAGVGGVGGATPYATTPFAASPMVGDGAAASPFVDG 1476
Query: 355 -AQFSPYVGGMAFSPS--------------------SSPGYSPSSPGYSPTSPGYSPTSP 471
A FSP VG +FSP+ SP YSP+SP YSPTSP YSPTSP
Sbjct: 1477 GAAFSPAVGAASFSPAYSPDSGSYGSGFASGSYGAGDSPAYSPTSPQYSPTSPAYSPTSP 1536
Query: 472 GYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP
Sbjct: 1537 AYSPTSPAYSPTSPAYSP 1554
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1535 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1586
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1587 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1617
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1542 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1593
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1594 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1624
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1549 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1600
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1601 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1631
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1556 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1607
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1608 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1638
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1563 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1614
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1615 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1645
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1570 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1621
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1622 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1652
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1577 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1628
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1629 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1659
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1584 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1635
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1636 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1666
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1591 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1642
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1643 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1673
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1598 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1649
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1650 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1680
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1605 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1656
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1657 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1687
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1612 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1663
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1664 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1694
Score = 71.6 bits (174), Expect = 3e-11
Identities = 43/85 (50%), Positives = 50/85 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1619 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1670
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPT 507
YSPTSP YSPTSP YSPTSP YSP+
Sbjct: 1671 YSPTSPAYSPTSPAYSPTSPAYSPS 1695
[28][TOP]
>UniRef100_O00820 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba
castellanii RepID=O00820_ACACA
Length = 1569
Score = 181 bits (458), Expect = 4e-44
Identities = 104/188 (55%), Positives = 127/188 (67%), Gaps = 13/188 (6%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR +TG LMRCSFEET DILL+AA ++E D L GV+ENI+LGQL P+GTG +L+L
Sbjct: 1319 RHGINRVETGCLMRCSFEETADILLEAATFSELDPLSGVSENILLGQLPPLGTGCFDLFL 1378
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPY--HEGMMSPNYL-LSPNMRLSPMS 351
N+ LK+AIE + F A SP S TPY + PN+ +P R+SP +
Sbjct: 1379 NESKLKDAIEPPAGGEATAM-FYEPGATSPGSATPYMGSDERYLPNFFHTTPMYRMSPGA 1437
Query: 352 D--AQFSPYV-------GGMAFSPS-SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYS 501
A +SPYV G +FSPS SSP YSP+SPGYSP GYSP+SPGYSP+SPGYS
Sbjct: 1438 TPAASYSPYVDFGEFSPGRGSFSPSPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYS 1497
Query: 502 PTSPTYSP 525
P+SP YSP
Sbjct: 1498 PSSPGYSP 1505
[29][TOP]
>UniRef100_UPI0000F2BF13 PREDICTED: similar to RNA polymerase II isoform 2 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF13
Length = 1932
Score = 179 bits (453), Expect = 1e-43
Identities = 99/199 (49%), Positives = 121/199 (60%), Gaps = 24/199 (12%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1416 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1475
Query: 181 NDEMLKNAIEL------------------------QLPSYMDGLEFGMTPARSPVSGTPY 288
+ E K +E+ S G G +PA SP G+P
Sbjct: 1476 DAEKCKYGMEIPTNIPGLGAAGRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPG 1535
Query: 289 HEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTS 468
G SP Y+ SP +SP +SP A+ P S GY+P SP YSPTSP YSPTS
Sbjct: 1536 SPGPSSP-YIPSPGGAMSP----SYSP--TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTS 1588
Query: 469 PGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP+YSP
Sbjct: 1589 PSYSPTSPNYSPTSPSYSP 1607
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1602 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1653
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1654 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1684
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1609 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1660
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1691
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1616 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1667
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1668 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1698
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1623 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1674
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1705
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1630 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1681
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1712
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1644 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1695
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP+YSP
Sbjct: 1696 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 1726
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1651 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1702
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 1703 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 1733
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + + SP ++SP+S P YSP+SP
Sbjct: 1686 SPSYSPTSPS---YSPTSPSYSPTSPNYSPTSPNYTPTSP-----SYSPTS-PSYSPTSP 1736
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1737 NYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1768
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SPNY SPN + S + SP ++SP+S P Y+P+SP
Sbjct: 1693 SPSYSPTSPS---YSPTSPNYSPTSPNYTPTSPSYSPTSP-----SYSPTS-PNYTPTSP 1743
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP Y+P
Sbjct: 1744 NYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP 1775
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP Y +P S +SP ++SP+S SP Y
Sbjct: 1756 SPSYSPTSPS---YSPSSPRY--TPQSPTYTPSSPSYSP--SSPSYSPTSPKYTPTSPSY 1808
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1809 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1845
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP +SP+S SP Y
Sbjct: 1672 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPTSPNYTPTSPSY 1724
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 1725 SPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 1761
Score = 80.1 bits (196), Expect = 9e-14
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP+ + +++P ++SPSS SP YSP+SP YSPTSP YSPT
Sbjct: 1784 SPSY--SPSSPSYSPTSPKYTPT--SPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1839
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSPT+P YSPTSPTYSP
Sbjct: 1840 SPTYSPTTPKYSPTSPTYSP 1859
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1816 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1863
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1864 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1894
Score = 74.7 bits (182), Expect = 4e-12
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
TP S T SPNY SPN SP S + +SP+S P YSP+SP
Sbjct: 1718 TPTSPSYSPTSPSYSPTSPNYTPTSPNY--SPTSPS----------YSPTS-PSYSPTSP 1764
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP Y+P SP Y+P+SP YSP+SP+YSP
Sbjct: 1765 SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSP 1796
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1840 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1884
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1885 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1917
[30][TOP]
>UniRef100_UPI0001B7A25B UPI0001B7A25B related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25B
Length = 1932
Score = 179 bits (453), Expect = 1e-43
Identities = 99/199 (49%), Positives = 121/199 (60%), Gaps = 24/199 (12%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1416 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1475
Query: 181 NDEMLKNAIEL------------------------QLPSYMDGLEFGMTPARSPVSGTPY 288
+ E K +E+ S G G +PA SP G+P
Sbjct: 1476 DAEKCKYGMEIPTNIPGLGAAGRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPG 1535
Query: 289 HEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTS 468
G SP Y+ SP +SP +SP A+ P S GY+P SP YSPTSP YSPTS
Sbjct: 1536 SPGPSSP-YIPSPGGAMSP----SYSP--TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTS 1588
Query: 469 PGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP+YSP
Sbjct: 1589 PSYSPTSPNYSPTSPSYSP 1607
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1602 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1653
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1654 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1684
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1609 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1660
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1691
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1616 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1667
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1668 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1698
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1623 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1674
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1705
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1630 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1681
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1712
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1644 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1695
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP+YSP
Sbjct: 1696 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 1726
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1651 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1702
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 1703 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 1733
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + + SP ++SP+S P YSP+SP
Sbjct: 1686 SPSYSPTSPS---YSPTSPSYSPTSPNYSPTSPNYTPTSP-----SYSPTS-PSYSPTSP 1736
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1737 NYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1768
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SPNY SPN + S + SP ++SP+S P Y+P+SP
Sbjct: 1693 SPSYSPTSPS---YSPTSPNYSPTSPNYTPTSPSYSPTSP-----SYSPTS-PNYTPTSP 1743
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP Y+P
Sbjct: 1744 NYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP 1775
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP Y +P S +SP ++SP+S SP Y
Sbjct: 1756 SPSYSPTSPS---YSPSSPRY--TPQSPTYTPSSPSYSP--SSPSYSPTSPKYTPTSPSY 1808
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1809 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1845
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP +SP+S SP Y
Sbjct: 1672 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPTSPNYTPTSPSY 1724
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 1725 SPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 1761
Score = 80.1 bits (196), Expect = 9e-14
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP+ + +++P ++SPSS SP YSP+SP YSPTSP YSPT
Sbjct: 1784 SPSY--SPSSPSYSPTSPKYTPT--SPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1839
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSPT+P YSPTSPTYSP
Sbjct: 1840 SPTYSPTTPKYSPTSPTYSP 1859
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1816 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1863
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1864 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1894
Score = 74.7 bits (182), Expect = 4e-12
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
TP S T SPNY SPN SP S + +SP+S P YSP+SP
Sbjct: 1718 TPTSPSYSPTSPSYSPTSPNYTPTSPNY--SPTSPS----------YSPTS-PSYSPTSP 1764
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP Y+P SP Y+P+SP YSP+SP+YSP
Sbjct: 1765 SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSP 1796
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1840 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1884
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1885 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1917
[31][TOP]
>UniRef100_UPI00005A0B1D PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=2 Tax=Canis lupus familiaris
RepID=UPI00005A0B1D
Length = 1764
Score = 178 bits (452), Expect = 2e-43
Identities = 101/193 (52%), Positives = 127/193 (65%), Gaps = 18/193 (9%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1447 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1506
Query: 181 NDEMLKNAIEL------------QLPSYMDGLEFGMTP---ARSPVSG--TPYHEGMMSP 309
+ E K +E+ PS M G+ MTP +P G +P G MSP
Sbjct: 1507 DAEKCKYGMEIPTNIPATGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGGAMSP 1566
Query: 310 NYLLSP-NMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPT 486
+Y SP + P S ++P ++SP +SP YSP+SP YSPTSP YSPTSP YSPT
Sbjct: 1567 SY--SPTSPAYEPRSPGGYTPQ--SPSYSP-TSPSYSPTSPSYSPTSPNYSPTSPSYSPT 1621
Query: 487 SPGYSPTSPTYSP 525
SP YSPTSP+YSP
Sbjct: 1622 SPSYSPTSPSYSP 1634
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1622 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1673
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1674 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1704
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1629 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1680
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1681 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1711
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1636 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1687
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1718
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1643 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1694
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1695 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1725
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1657 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1708
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1709 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1739
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1664 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1715
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1716 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1746
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/91 (48%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSPS P
Sbjct: 1678 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PNYSPSRPN 1729
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP Y+P SP YSP
Sbjct: 1730 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSP 1760
Score = 70.1 bits (170), Expect = 9e-11
Identities = 41/87 (47%), Positives = 51/87 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP +SPS P Y+P+SP
Sbjct: 1685 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPSR-PNYTPTSPS 1736
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSP 513
YSPTSP YSPTSP Y+P SP YSPTSP
Sbjct: 1737 YSPTSPSYSPTSPNYTPMSPNYSPTSP 1763
[32][TOP]
>UniRef100_UPI00005A0B27 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 18 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B27
Length = 1831
Score = 176 bits (446), Expect = 9e-43
Identities = 98/180 (54%), Positives = 124/180 (68%), Gaps = 5/180 (2%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1413 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1472
Query: 181 NDEMLKNAIELQLPSYMDGL----EFGMTPARSPVSGTPYHEGMMSPNYLLSP-NMRLSP 345
+ E K +E +P+ + GL GMTP + G MSP+Y SP + P
Sbjct: 1473 DAEKCKYGME--IPTNIPGLGAAGRSGMTPGAA--------GGAMSPSY--SPTSPAYEP 1520
Query: 346 MSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
S ++P ++SP +SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1521 RSPGGYTPQ--SPSYSP-TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1577
Score = 84.7 bits (208), Expect = 4e-15
Identities = 47/92 (51%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P S T + PNY SP+ + S + SP M+ + S +P YSPSSP
Sbjct: 1653 SPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSYSPSSP 1712
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1713 EYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1744
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1579 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1630
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1631 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1661
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1586 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1637
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1638 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1668
Score = 83.6 bits (205), Expect = 8e-15
Identities = 51/93 (54%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 TPARSPVSG--TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
+P+ SP S TP MSPNY SP SP S +++P +SP+S P YSP+S
Sbjct: 1684 SPSYSPTSPNYTP-----MSPNY--SPTPSYSP-SSPEYTPT--SPKYSPTS-PKYSPTS 1732
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPT+P YSPTSP YSPTSP Y+P
Sbjct: 1733 PKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTP 1765
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1600 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1651
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1652 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1682
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1607 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1658
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1659 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1689
Score = 78.2 bits (191), Expect = 3e-13
Identities = 49/95 (51%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPS---SSPGYSP 420
+P+R + T SP+Y SPN +PMS +SP +PS SSP Y+P
Sbjct: 1667 SPSRPNYTPTSPSYSPTSPSYSPTSPNY--TPMSP-NYSP-------TPSYSPSSPEYTP 1716
Query: 421 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP YSPTSP YSPTSP YSPTSP YSPT+P YSP
Sbjct: 1717 TSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSP 1751
Score = 75.5 bits (184), Expect = 2e-12
Identities = 47/94 (50%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP+S P Y+P+SP
Sbjct: 1715 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSPT--SPTYSPTS-PVYTPTSPK 1769
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSP---TYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP TYSP
Sbjct: 1770 YSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP 1803
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1739 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1783
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1784 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1816
[33][TOP]
>UniRef100_UPI00005A0B19 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 5 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B19
Length = 1693
Score = 176 bits (446), Expect = 9e-43
Identities = 98/180 (54%), Positives = 124/180 (68%), Gaps = 5/180 (2%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1399 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1458
Query: 181 NDEMLKNAIELQLPSYMDGL----EFGMTPARSPVSGTPYHEGMMSPNYLLSP-NMRLSP 345
+ E K +E +P+ + GL GMTP + G MSP+Y SP + P
Sbjct: 1459 DAEKCKYGME--IPTNIPGLGAAGRSGMTPGAA--------GGAMSPSY--SPTSPAYEP 1506
Query: 346 MSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
S ++P ++SP +SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1507 RSPGGYTPQ--SPSYSP-TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1563
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1565 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1616
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1617 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1647
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1572 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1623
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1624 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1654
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1586 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1637
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1638 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1668
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1593 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1644
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1645 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1675
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/91 (48%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSPS P
Sbjct: 1607 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PNYSPSRPN 1658
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP Y+P SP YSP
Sbjct: 1659 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSP 1689
Score = 70.1 bits (170), Expect = 9e-11
Identities = 41/87 (47%), Positives = 51/87 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP +SPS P Y+P+SP
Sbjct: 1614 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPSR-PNYTPTSPS 1665
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSP 513
YSPTSP YSPTSP Y+P SP YSPTSP
Sbjct: 1666 YSPTSPSYSPTSPNYTPMSPNYSPTSP 1692
[34][TOP]
>UniRef100_UPI00005A0B26 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 17 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B26
Length = 1684
Score = 173 bits (438), Expect = 8e-42
Identities = 97/190 (51%), Positives = 120/190 (63%), Gaps = 15/190 (7%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1406 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1465
Query: 181 NDEMLKNAIELQL--------------PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL 318
+ E K +E+ P+Y G TP S T SP+Y
Sbjct: 1466 DAEKCKYGMEIPTNIPGLGAAGRESTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1525
Query: 319 -LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPG 495
SPN + S + SP ++SP +SP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1526 PTSPNYSPTSPSYSPTSP-----SYSP-TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1579
Query: 496 YSPTSPTYSP 525
YSPTSP+YSP
Sbjct: 1580 YSPTSPSYSP 1589
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1577 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1628
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1629 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1659
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1584 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1635
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1636 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1666
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/91 (48%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSPS P
Sbjct: 1598 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PNYSPSRPN 1649
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP Y+P SP YSP
Sbjct: 1650 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSP 1680
Score = 70.1 bits (170), Expect = 9e-11
Identities = 41/87 (47%), Positives = 51/87 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP +SPS P Y+P+SP
Sbjct: 1605 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPSR-PNYTPTSPS 1656
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSP 513
YSPTSP YSPTSP Y+P SP YSPTSP
Sbjct: 1657 YSPTSPSYSPTSPNYTPMSPNYSPTSP 1683
[35][TOP]
>UniRef100_UPI00005A0B25 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 16 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B25
Length = 1752
Score = 173 bits (438), Expect = 8e-42
Identities = 97/190 (51%), Positives = 120/190 (63%), Gaps = 15/190 (7%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1406 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1465
Query: 181 NDEMLKNAIELQL--------------PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL 318
+ E K +E+ P+Y G TP S T SP+Y
Sbjct: 1466 DAEKCKYGMEIPTNIPGLGAAGRESTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1525
Query: 319 -LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPG 495
SPN + S + SP ++SP +SP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1526 PTSPNYSPTSPSYSPTSP-----SYSP-TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1579
Query: 496 YSPTSPTYSP 525
YSPTSP+YSP
Sbjct: 1580 YSPTSPSYSP 1589
Score = 80.5 bits (197), Expect = 7e-14
Identities = 50/96 (52%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNM-RLSPMS-DAQFSPYVGGMAFSPSSSPGYSPSS 426
TP S T SPNY SP+ SP S + ++SP +SP+S P YSP+S
Sbjct: 1651 TPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPNPTYSPTS-PKYSPTS 1709
Query: 427 PGYSPTSPG---YSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSPGYSPTSP YS TSP SP
Sbjct: 1710 PTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1745
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1577 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1628
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1629 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1659
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1584 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1635
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1636 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1666
Score = 75.9 bits (185), Expect = 2e-12
Identities = 45/93 (48%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1591 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPN 1642
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSP--TYSP 525
YSP+ P Y+PTSP YSPTSP YSPTSP TYSP
Sbjct: 1643 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSP 1675
Score = 74.3 bits (181), Expect = 5e-12
Identities = 51/97 (52%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLS-PNMRLSPMSDAQFSPYVGGMAFSPSS-SPGYSPSS 426
+P+ SP S + SPNY S PN + S + SP ++SP+S + YSPSS
Sbjct: 1626 SPSYSPTSPS---YSPTSPNYSPSRPNYTPTSPSYSPTSP-----SYSPTSPNYTYSPSS 1677
Query: 427 PGYSPTSPG--YSPTSPG--YSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1678 PSYSPTSPNPKYSPTSPNPTYSPTSPKYSPTSPTYSP 1714
Score = 73.2 bits (178), Expect = 1e-11
Identities = 49/104 (47%), Positives = 58/104 (55%), Gaps = 14/104 (13%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSS-SPGYSPSS 426
+P+R + T SP+Y SPN SP S + +SP+S +P YSP+S
Sbjct: 1644 SPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPS----------YSPTSPNPKYSPTS 1693
Query: 427 PG--YSPTSPGYSPTSP----------GYSPTSPGYSPTSPTYS 522
P YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1694 PNPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1737
[36][TOP]
>UniRef100_UPI00005A0B23 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 14 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B23
Length = 1653
Score = 172 bits (435), Expect = 2e-41
Identities = 95/179 (53%), Positives = 118/179 (65%), Gaps = 4/179 (2%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1386 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1445
Query: 181 NDE---MLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPM 348
+ E + + P+Y G TP S T SP+Y SPN +
Sbjct: 1446 DAEKCGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1505
Query: 349 SDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
S + SP ++SP +SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1506 SYSPTSP-----SYSP-TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1558
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1546 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1597
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1598 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1628
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1553 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1604
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1605 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1635
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/91 (48%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSPS P
Sbjct: 1567 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PNYSPSRPN 1618
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP Y+P SP YSP
Sbjct: 1619 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSP 1649
Score = 70.1 bits (170), Expect = 9e-11
Identities = 41/87 (47%), Positives = 51/87 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP +SPS P Y+P+SP
Sbjct: 1574 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPSR-PNYTPTSPS 1625
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSP 513
YSPTSP YSPTSP Y+P SP YSPTSP
Sbjct: 1626 YSPTSPSYSPTSPNYTPMSPNYSPTSP 1652
[37][TOP]
>UniRef100_UPI00005A0B22 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 13 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B22
Length = 1722
Score = 172 bits (435), Expect = 2e-41
Identities = 95/179 (53%), Positives = 118/179 (65%), Gaps = 4/179 (2%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1386 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1445
Query: 181 NDE---MLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPM 348
+ E + + P+Y G TP S T SP+Y SPN +
Sbjct: 1446 DAEKCGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1505
Query: 349 SDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
S + SP ++SP +SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1506 SYSPTSP-----SYSP-TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1558
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1553 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1604
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+SP YSPTSP YSPTSPTYSP
Sbjct: 1605 YSPTSPNYSPSSPKYSPTSPKYSPTSPTYSP 1635
Score = 82.4 bits (202), Expect = 2e-14
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSPSSP
Sbjct: 1567 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PNYSPSSPK 1618
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPT+P YSPTSPTYSP
Sbjct: 1619 YSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1649
Score = 80.9 bits (198), Expect = 5e-14
Identities = 48/97 (49%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SPNY SP+ + ++SP +SP++ SP Y
Sbjct: 1595 SPSYSPTSPS---YSPTSPNY--SPSSPKYSPTSPKYSPT--SPTYSPTTPKYSPTSPTY 1647
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1648 SPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1684
Score = 72.4 bits (176), Expect = 2e-11
Identities = 45/89 (50%), Positives = 51/89 (57%), Gaps = 16/89 (17%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP Y SP + ++SP +SP+S SP YSP+SP YSPTSP YSPT
Sbjct: 1623 SPKY--SPTSPTYSPTTPKYSPT--SPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPT 1678
Query: 466 SP----------GYSPTSPGYSPTSPTYS 522
SP YSPTSPGYSPTSPTYS
Sbjct: 1679 SPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1707
Score = 70.9 bits (172), Expect = 5e-11
Identities = 47/94 (50%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP+S P YSP+SP
Sbjct: 1630 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSPT--SPTYSPTS-PKYSPTSPT 1681
Query: 433 YSPTSPG---YSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSPGYSPTSP YS TSP SP
Sbjct: 1682 YSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1715
[38][TOP]
>UniRef100_UPI00005A0B2B PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 22 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2B
Length = 1892
Score = 171 bits (434), Expect = 2e-41
Identities = 101/216 (46%), Positives = 125/216 (57%), Gaps = 41/216 (18%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1417 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1476
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSG-----TPYHEGMMSPNYLLSPNM---- 333
+ E K +E+ G+ FG P SP+ G TP+++G SP++
Sbjct: 1477 DAEKCKYGMEIPTNIPATGMFFGSAP--SPMGGISPAMTPWNQGATPAYGAWSPSVGSGM 1534
Query: 334 ----------------RLSPMSDAQFSPYVG-----GMAFSPSSSP-----------GYS 417
SP +SP G G A SPS SP GY+
Sbjct: 1535 TPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGGAMSPSYSPTSPAYEPRSPGGYT 1594
Query: 418 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1595 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1630
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1583 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1637
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1638 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1679
Score = 84.7 bits (208), Expect = 4e-15
Identities = 52/98 (53%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLS-PNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+P+ SP S + SPNY S PN + S + SP ++SP+S SP
Sbjct: 1716 SPSYSPTSPS---YSPTSPNYSPSRPNYTPTSPSYSPTSP-----SYSPTSPKYTPTSPS 1767
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1768 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1805
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1625 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1676
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1707
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1632 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1683
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1714
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1639 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1690
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1721
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1646 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1697
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1728
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1653 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1704
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1735
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1667 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1718
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1719 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1749
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1674 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1725
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1726 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1756
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1776 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1823
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1824 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1854
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1800 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1844
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1845 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1877
[39][TOP]
>UniRef100_UPI0000E48673 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48673
Length = 1880
Score = 170 bits (431), Expect = 5e-41
Identities = 101/210 (48%), Positives = 122/210 (58%), Gaps = 35/210 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D G LMRCSFEETVDIL DA A+ ETD L+GV+ENIMLG+LA +GTG +L L
Sbjct: 1408 RHGINRQDVGALMRCSFEETVDILNDAGAHGETDHLKGVSENIMLGKLAGLGTGSFDLLL 1467
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSP-----NMRLSP 345
+ E K+ +E+ + G+ G+ + G M SP+ +SP N +P
Sbjct: 1468 DAEKCKHGMEIPM-----GMGAGLVGMPGMLFG-----AMGSPSQSMSPQMTPWNQGATP 1517
Query: 346 MSDAQFSPYV------GGMAFSP------------------------SSSPGYSPSSPGY 435
M A +SP + GG FSP S SPGYSP+SP Y
Sbjct: 1518 MHGASWSPMMGSGMTPGGPGFSPANSESTGFSPAYSPAWSPQPQSPGSPSPGYSPTSPSY 1577
Query: 436 SPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPTSPGYSP SP YSPTSP YSPTSP+YSP
Sbjct: 1578 SPTSPGYSPASPSYSPTSPSYSPTSPSYSP 1607
Score = 87.0 bits (214), Expect = 7e-16
Identities = 48/93 (51%), Positives = 57/93 (61%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +PA S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1583 GYSPASPSYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1637
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1638 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1670
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1609 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1660
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1691
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1616 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1667
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1668 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1698
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1623 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1674
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1705
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1630 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1681
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1682 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1712
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1637 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1688
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1689 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1719
Score = 83.6 bits (205), Expect = 8e-15
Identities = 53/107 (49%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Frame = +1
Query: 214 QLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMA- 387
Q PSY G +P+ S T SP+Y SPN S + + SP +
Sbjct: 1741 QSPSYSPGSP-SYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSP 1799
Query: 388 -FSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SPSS P YSP+SP YSPTSP YSP SP YSPTSP YSP+SPTYSP
Sbjct: 1800 KYSPSS-PKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSP 1845
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/94 (52%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPG---YSPS 423
+P+ SP S + SP+Y S + + SP S + SPS SPG YSPS
Sbjct: 1700 SPSYSPTSPS---YSPTSPSYSPS-SPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPS 1755
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP YSPTSP +SP+SPTYSP
Sbjct: 1756 SPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSP 1789
Score = 81.6 bits (200), Expect = 3e-14
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1644 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1695
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP YSP
Sbjct: 1696 YSPTSPSYSPTSPSYSPTSPSYSPSSPKYSP 1726
Score = 81.6 bits (200), Expect = 3e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1651 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1702
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+SP YSPTSP+YSP
Sbjct: 1703 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSP 1733
Score = 81.6 bits (200), Expect = 3e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1658 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1709
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+SP YSPTSP YSPTSP+YSP
Sbjct: 1710 YSPTSPSYSPSSPKYSPTSPSYSPTSPSYSP 1740
Score = 80.5 bits (197), Expect = 7e-14
Identities = 42/74 (56%), Positives = 50/74 (67%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSP 483
SP+Y SP +SP G ++SPSS P YSP+SP YSPTSP YSPTSP +SP
Sbjct: 1728 SPSY--SPTSPSYSPQSPSYSP--GSPSYSPSS-PKYSPTSPSYSPTSPSYSPTSPNFSP 1782
Query: 484 TSPGYSPTSPTYSP 525
+SP YSP SP+YSP
Sbjct: 1783 SSPTYSPASPSYSP 1796
Score = 73.9 bits (180), Expect = 6e-12
Identities = 44/83 (53%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP S ++SP +SP+S SP YSP+SP YSP+SP YSPT
Sbjct: 1791 SPSY--SPTSPKYSPSSPKYSPT--SPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPT 1846
Query: 466 SP---GYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP+YSP
Sbjct: 1847 SPKGSTYSPTSPSYSPTSPSYSP 1869
Score = 72.0 bits (175), Expect = 2e-11
Identities = 45/90 (50%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA S T SP Y SP + ++SP +SP+S P YSPSSP
Sbjct: 1788 SPASPSYSPTSPKYSPSSPKY--SPTSPTYSPTSPKYSP--ASPTYSPTS-PKYSPSSPT 1842
Query: 433 YSPTSPG---YSPTSPGYSPTSPGYSPTSP 513
YSPTSP YSPTSP YSPTSP YSPTSP
Sbjct: 1843 YSPTSPKGSTYSPTSPSYSPTSPSYSPTSP 1872
[40][TOP]
>UniRef100_UPI00005A0B2A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 21 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2A
Length = 1896
Score = 169 bits (429), Expect = 8e-41
Identities = 104/220 (47%), Positives = 129/220 (58%), Gaps = 45/220 (20%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1417 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1476
Query: 181 NDEMLKNAIEL--QLPSY----MDGLEFGMTPARSPVSG-----TPYHEGMMSPNYLLSP 327
+ E K +E+ +P G+ FG P SP+ G TP+++G SP
Sbjct: 1477 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAP--SPMGGISPAMTPWNQGATPAYGAWSP 1534
Query: 328 NMRLSP---------MSDAQ---------FSPYVG-----GMAFSPSSSP---------- 408
++P SDA +SP G G A SPS SP
Sbjct: 1535 RSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGGAMSPSYSPTSPAYEPRSP 1594
Query: 409 -GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1595 GGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1634
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1587 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1641
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1642 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1683
Score = 84.7 bits (208), Expect = 4e-15
Identities = 52/98 (53%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLS-PNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+P+ SP S + SPNY S PN + S + SP ++SP+S SP
Sbjct: 1720 SPSYSPTSPS---YSPTSPNYSPSRPNYTPTSPSYSPTSP-----SYSPTSPKYTPTSPS 1771
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1772 YSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1809
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1629 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1680
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1681 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1711
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1636 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1687
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1718
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1643 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1694
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1695 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1725
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1650 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1701
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1702 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1732
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1657 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1708
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1709 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1739
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1671 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1722
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1723 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1753
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1678 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1729
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1730 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1760
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1780 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1827
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1828 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1858
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1804 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1848
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1849 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1881
[41][TOP]
>UniRef100_UPI0000D5670C PREDICTED: similar to GA13798-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D5670C
Length = 2007
Score = 169 bits (428), Expect = 1e-40
Identities = 104/231 (45%), Positives = 128/231 (55%), Gaps = 56/231 (24%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAA++AE D +RGV+ENI++GQL +GTG +L L
Sbjct: 1413 RHGINRQDTGALMRCSFEETVDVLMDAASHAEVDPMRGVSENIIMGQLPRMGTGCFDLLL 1472
Query: 181 NDEMLKNAIELQLPSYMDGLEFGM------TPARSP-VSGTPYHEGM------------- 300
+ E K I + D + GM TP+ SP + TP+++G
Sbjct: 1473 DAEKCKMGIPIPQAHGADIMASGMFFGSAATPSMSPGAAMTPWNQGATPYVGSAWSPHNL 1532
Query: 301 ----------------------MSPNY-LLSPNMRLSPMSDAQFSPYVGGMAFSPSS--- 402
MSP Y SP + MS SP+ ++SPSS
Sbjct: 1533 MGSGMTPGGPAFSPSAASDASGMSPGYGAWSPTPQSPAMSPFMASPHGQSPSYSPSSPSF 1592
Query: 403 ----------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPGYSP+SPGYSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1593 QPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1643
Score = 88.2 bits (217), Expect = 3e-16
Identities = 49/92 (53%), Positives = 56/92 (60%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
MTP S T SPNY SP + +SP ++SP+S P YSP+SP
Sbjct: 1599 MTPVSPGYSPTSPGYSPTSPNY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSP 1653
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1654 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1685
Score = 84.7 bits (208), Expect = 4e-15
Identities = 48/99 (48%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SP 408
G +P S T SP+Y SP + +SP ++SP+S SP
Sbjct: 1612 GYSPTSPNYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTSPSYSPTSP 1667
Query: 409 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1668 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1706
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1631 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1682
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1713
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1638 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1689
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1690 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1720
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1645 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1696
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1697 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1727
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1652 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1703
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1704 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1734
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1659 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1710
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1711 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1741
Score = 80.5 bits (197), Expect = 7e-14
Identities = 45/91 (49%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1666 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1717
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP Y+P
Sbjct: 1718 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP 1748
Score = 79.3 bits (194), Expect = 1e-13
Identities = 52/97 (53%), Positives = 61/97 (62%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVS-----GTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGY 414
+P+ SP S G+P + SP+Y SPN SP S Q +P +SPSS P Y
Sbjct: 1785 SPSYSPTSPSFAGGSPQYSPT-SPSYSPTSPNY--SP-SSPQHTP-AASSRYSPSS-PNY 1838
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPSSP YSPTSP YSP S YSPTSP Y+PTSP+YSP
Sbjct: 1839 SPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSP 1875
Score = 78.6 bits (192), Expect = 3e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1673 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1724
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+SP Y+P SP+YSP
Sbjct: 1725 YSPTSPSYSPTSPSYSPSSPRYTPASPSYSP 1755
Score = 78.6 bits (192), Expect = 3e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1680 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1731
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+SP Y+P SP YSPTSP+YSP
Sbjct: 1732 YSPTSPSYSPSSPRYTPASPSYSPTSPSYSP 1762
Score = 78.6 bits (192), Expect = 3e-13
Identities = 43/74 (58%), Positives = 49/74 (66%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSP 483
SP+Y SP S Q+SP +FSPSS P YSP+SP YSPTSP ++ SP YSP
Sbjct: 1750 SPSY--SPTSPSYSPSSPQYSP--ASPSFSPSS-PKYSPTSPSYSPTSPSFAGGSPQYSP 1804
Query: 484 TSPGYSPTSPTYSP 525
TSP YSPTSP YSP
Sbjct: 1805 TSPSYSPTSPNYSP 1818
Score = 76.6 bits (187), Expect = 1e-12
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP ++SPSS SP Y
Sbjct: 1701 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPSSPRYTPASPSY 1753
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSP+SP YSP SP +SP+SP YSPTSP+YSP
Sbjct: 1754 SPTSPSYSPSSPQYSPASPSFSPSSPKYSPTSPSYSP 1790
Score = 76.3 bits (186), Expect = 1e-12
Identities = 43/91 (47%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1687 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1738
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP Y+P SP YSPTSP YSP+SP YSP
Sbjct: 1739 YSPSSPRYTPASPSYSPTSPSYSPSSPQYSP 1769
Score = 75.1 bits (183), Expect = 3e-12
Identities = 45/92 (48%), Positives = 55/92 (59%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P SP S + SPNY S +P + +++SP +SPSS P YSP+S
Sbjct: 1797 GGSPQYSPTSPS---YSPTSPNYSPSSPQH-TPAASSRYSP--SSPNYSPSS-PSYSPTS 1849
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
P YSP S YSPTSP Y+PTSP YSP SP YS
Sbjct: 1850 PQYSPHSTKYSPTSPTYTPTSPSYSPASPAYS 1881
Score = 72.0 bits (175), Expect = 2e-11
Identities = 49/98 (50%), Positives = 63/98 (64%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y S + R +P S + +SP ++SPSS P YSP+SP
Sbjct: 1722 SPSYSPTSPS---YSPTSPSYSPS-SPRYTPASPS-YSPT--SPSYSPSS-PQYSPASPS 1773
Query: 433 YSPTSPGYSPTSPGYSPTSP---G----YSPTSPTYSP 525
+SP+SP YSPTSP YSPTSP G YSPTSP+YSP
Sbjct: 1774 FSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSP 1811
Score = 71.2 bits (173), Expect = 4e-11
Identities = 40/91 (43%), Positives = 53/91 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P +P + + Y SPNY SP+ + Q+SP+ +SP+S P Y+P+SP
Sbjct: 1820 SPQHTPAASSRYSPS--SPNY--SPSSPSYSPTSPQYSPH--STKYSPTS-PTYTPTSPS 1872
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP SP YS P YSP+SP YSPTSP P
Sbjct: 1873 YSPASPAYSSQPPRYSPSSPSYSPTSPITLP 1903
[42][TOP]
>UniRef100_UPI0001796DD3 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase II subunit A) (DNA-directed RNA polymerase III
largest subunit) n=1 Tax=Equus caballus
RepID=UPI0001796DD3
Length = 1834
Score = 167 bits (424), Expect = 3e-40
Identities = 109/231 (47%), Positives = 127/231 (54%), Gaps = 56/231 (24%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1416 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1475
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMTP----------ARSPVS 276
+ E K +E+ PS M G+ MTP A SP
Sbjct: 1476 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNVGATPAYGAWSPSV 1535
Query: 277 G---TPYHEGM----------MSPNY--LLSPNMRLSPMSDAQFSPYV--GGMAFSPSSS 405
G TP G SP Y SP SP S SPY+ G A SPS S
Sbjct: 1536 GSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPG-SPGSPGPSSPYIPSPGGAMSPSYS 1594
Query: 406 P-----------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1595 PTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1645
Score = 96.7 bits (239), Expect = 9e-19
Identities = 55/105 (52%), Positives = 62/105 (59%), Gaps = 8/105 (7%)
Frame = +1
Query: 235 GLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYV-----GGMAFSPS 399
G G +PA SP G+P G SP Y+ SP +SP Y G SPS
Sbjct: 1556 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPS 1614
Query: 400 ---SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1659
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1652
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694
Score = 87.0 bits (214), Expect = 7e-16
Identities = 51/97 (52%), Positives = 61/97 (62%), Gaps = 7/97 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+P+ SP S + SPNY SPN + S + SP ++SP+S SP
Sbjct: 1731 SPSYSPTSPS---YSPTSPNYSPTSPNYTPTSPSYSPTSP-----SYSPTSPNYTPTSPN 1782
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
YSP+SP YSPT+P YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1783 YSPTSPSYSPTTPSYSPTSPSYSPTSPGYSPTSPTYS 1819
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1640 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1691
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1722
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1647 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1698
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1729
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1736
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1661 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1712
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1743
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1668 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1719
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1750
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1682 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1733
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP+YSP
Sbjct: 1734 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 1764
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1689 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1740
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 1771
Score = 81.6 bits (200), Expect = 3e-14
Identities = 46/92 (50%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + + SP ++SP+S P YSP+SP
Sbjct: 1724 SPSYSPTSPS---YSPTSPSYSPTSPNYSPTSPNYTPTSP-----SYSPTS-PSYSPTSP 1774
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPT+P YSPTSP+YSP
Sbjct: 1775 NYTPTSPNYSPTSPSYSPTTPSYSPTSPSYSP 1806
Score = 81.3 bits (199), Expect = 4e-14
Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP ++SP+S SP Y
Sbjct: 1703 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTSPNYSPTSPNY 1755
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+P+SP YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 1792
Score = 80.1 bits (196), Expect = 9e-14
Identities = 46/97 (47%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP +SP+S SP Y
Sbjct: 1710 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPTSPNYTPTSPSY 1762
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP Y+PTSP YSPTSP YSPT+P+YSP
Sbjct: 1763 SPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTPSYSP 1799
Score = 65.5 bits (158), Expect = 2e-09
Identities = 42/85 (49%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
TP S T SPNY SPN SP S + +SP++ P YSP+SP
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNY--SPTSPS----------YSPTT-PSYSPTSP 1802
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSP 504
YSPTSPGYSPTSP YS TSP SP
Sbjct: 1803 SYSPTSPGYSPTSPTYSLTSPAISP 1827
[43][TOP]
>UniRef100_UPI0000F2BF12 PREDICTED: similar to RNA polymerase II isoform 1 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF12
Length = 1970
Score = 167 bits (424), Expect = 3e-40
Identities = 109/231 (47%), Positives = 127/231 (54%), Gaps = 56/231 (24%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1416 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1475
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMTP----------ARSPVS 276
+ E K +E+ PS M G+ MTP A SP
Sbjct: 1476 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGMSPAMTPWNQGATPAYGAWSPSV 1535
Query: 277 G---TPYHEGM----------MSPNY--LLSPNMRLSPMSDAQFSPYV--GGMAFSPSSS 405
G TP G SP Y SP SP S SPY+ G A SPS S
Sbjct: 1536 GSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPG-SPGSPGPSSPYIPSPGGAMSPSYS 1594
Query: 406 P-----------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1595 PTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1645
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1652
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1640 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1691
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1722
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1647 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1698
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1729
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1736
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1661 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1712
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1743
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1668 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1719
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1750
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1682 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1733
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP+YSP
Sbjct: 1734 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 1764
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1689 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1740
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 1771
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + + SP ++SP+S P YSP+SP
Sbjct: 1724 SPSYSPTSPS---YSPTSPSYSPTSPNYSPTSPNYTPTSP-----SYSPTS-PSYSPTSP 1774
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1775 NYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1806
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SPNY SPN + S + SP ++SP+S P Y+P+SP
Sbjct: 1731 SPSYSPTSPS---YSPTSPNYSPTSPNYTPTSPSYSPTSP-----SYSPTS-PNYTPTSP 1781
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP Y+P
Sbjct: 1782 NYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP 1813
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP Y +P S +SP ++SP+S SP Y
Sbjct: 1794 SPSYSPTSPS---YSPSSPRY--TPQSPTYTPSSPSYSP--SSPSYSPTSPKYTPTSPSY 1846
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1847 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1883
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP +SP+S SP Y
Sbjct: 1710 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPTSPNYTPTSPSY 1762
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 1763 SPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 1799
Score = 80.1 bits (196), Expect = 9e-14
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP+ + +++P ++SPSS SP YSP+SP YSPTSP YSPT
Sbjct: 1822 SPSY--SPSSPSYSPTSPKYTPT--SPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSPT+P YSPTSPTYSP
Sbjct: 1878 SPTYSPTTPKYSPTSPTYSP 1897
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1854 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1901
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1902 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Score = 74.7 bits (182), Expect = 4e-12
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
TP S T SPNY SPN SP S + +SP+S P YSP+SP
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNY--SPTSPS----------YSPTS-PSYSPTSP 1802
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP Y+P SP Y+P+SP YSP+SP+YSP
Sbjct: 1803 SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSP 1834
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1878 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1922
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1923 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1955
[44][TOP]
>UniRef100_UPI0000EBDCD2 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
isoform 4 n=1 Tax=Bos taurus RepID=UPI0000EBDCD2
Length = 1970
Score = 167 bits (424), Expect = 3e-40
Identities = 109/231 (47%), Positives = 127/231 (54%), Gaps = 56/231 (24%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1416 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1475
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMTP----------ARSPVS 276
+ E K +E+ PS M G+ MTP A SP
Sbjct: 1476 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSV 1535
Query: 277 G---TPYHEGM----------MSPNY--LLSPNMRLSPMSDAQFSPYV--GGMAFSPSSS 405
G TP G SP Y SP SP S SPY+ G A SPS S
Sbjct: 1536 GSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPG-SPGSPGPSSPYIPSPGGAMSPSYS 1594
Query: 406 P-----------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1595 PTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1645
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1652
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1640 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1691
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1722
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1647 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1698
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1729
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1736
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1661 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1712
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1743
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1668 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1719
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1750
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1682 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1733
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP+YSP
Sbjct: 1734 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 1764
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1689 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1740
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 1771
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + + SP ++SP+S P YSP+SP
Sbjct: 1724 SPSYSPTSPS---YSPTSPSYSPTSPNYSPTSPNYTPTSP-----SYSPTS-PSYSPTSP 1774
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1775 NYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1806
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SPNY SPN + S + SP ++SP+S P Y+P+SP
Sbjct: 1731 SPSYSPTSPS---YSPTSPNYSPTSPNYTPTSPSYSPTSP-----SYSPTS-PNYTPTSP 1781
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP Y+P
Sbjct: 1782 NYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP 1813
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP Y +P S +SP ++SP+S SP Y
Sbjct: 1794 SPSYSPTSPS---YSPSSPRY--TPQSPTYTPSSPSYSP--SSPSYSPTSPKYTPTSPSY 1846
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1847 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1883
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP +SP+S SP Y
Sbjct: 1710 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPTSPNYTPTSPSY 1762
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 1763 SPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 1799
Score = 80.1 bits (196), Expect = 9e-14
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP+ + +++P ++SPSS SP YSP+SP YSPTSP YSPT
Sbjct: 1822 SPSY--SPSSPSYSPTSPKYTPT--SPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSPT+P YSPTSPTYSP
Sbjct: 1878 SPTYSPTTPKYSPTSPTYSP 1897
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1854 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1901
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1902 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Score = 74.7 bits (182), Expect = 4e-12
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
TP S T SPNY SPN SP S + +SP+S P YSP+SP
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNY--SPTSPS----------YSPTS-PSYSPTSP 1802
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP Y+P SP Y+P+SP YSP+SP+YSP
Sbjct: 1803 SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSP 1834
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1878 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1922
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1923 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1955
[45][TOP]
>UniRef100_UPI0000E24648 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Pan troglodytes RepID=UPI0000E24648
Length = 1913
Score = 167 bits (424), Expect = 3e-40
Identities = 109/231 (47%), Positives = 127/231 (54%), Gaps = 56/231 (24%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1416 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1475
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMTP----------ARSPVS 276
+ E K +E+ PS M G+ MTP A SP
Sbjct: 1476 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSV 1535
Query: 277 G---TPYHEGM----------MSPNY--LLSPNMRLSPMSDAQFSPYV--GGMAFSPSSS 405
G TP G SP Y SP SP S SPY+ G A SPS S
Sbjct: 1536 GSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPG-SPGSPGPSSPYIPSPGGAMSPSYS 1594
Query: 406 P-----------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1595 PTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1645
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1652
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1640 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1691
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1722
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP Y +P S +SP ++SP+S SP Y
Sbjct: 1737 SPSYSPTSPS---YSPSSPRY--TPQSPTYTPSSPSYSP--SSPSYSPTSPKYTPTSPSY 1789
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1790 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1826
Score = 80.1 bits (196), Expect = 9e-14
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP+ + +++P ++SPSS SP YSP+SP YSPTSP YSPT
Sbjct: 1765 SPSY--SPSSPSYSPTSPKYTPT--SPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1820
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSPT+P YSPTSPTYSP
Sbjct: 1821 SPTYSPTTPKYSPTSPTYSP 1840
Score = 79.0 bits (193), Expect = 2e-13
Identities = 45/91 (49%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1647 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1698
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTS +Y P
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSQSYHP 1729
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1797 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1844
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1845 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1875
Score = 76.3 bits (186), Expect = 1e-12
Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS---SSPGYSPS 423
+P+ SP S + SP+Y SP + + P V + SPS +SP YSPS
Sbjct: 1696 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSQSYHPTVVDSSTSPSYSPTSPSYSPS 1750
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP Y+P SP Y+P+SP YSP+SP YSPTSP Y+P
Sbjct: 1751 SPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTP 1784
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/104 (45%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSP-------------TSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP TSP YSPTSP+YSP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTSPSYSPTSPSYSP 1749
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1821 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1865
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1866 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1898
[46][TOP]
>UniRef100_UPI00005A0B2C PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 23 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2C
Length = 1888
Score = 167 bits (424), Expect = 3e-40
Identities = 102/236 (43%), Positives = 124/236 (52%), Gaps = 61/236 (25%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1416 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1475
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMT----------------- 255
+ E K +E+ PS M G+ MT
Sbjct: 1476 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYDPDPGAG 1535
Query: 256 --------------------------PARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA 357
PA SP G+P G SP Y+ SP +SP
Sbjct: 1536 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSP---- 1590
Query: 358 QFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP A+ P S GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1591 SYSP--TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1644
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1597 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1651
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1652 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1693
Score = 84.3 bits (207), Expect = 5e-15
Identities = 50/98 (51%), Positives = 62/98 (63%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+P+ SP S + SP+Y SPN S + +++P ++SPSS SP
Sbjct: 1723 SPSYSPTSPS---YSPTSPSYSPTSPNYSPSSPTSPKYTPT--SPSYSPSSPEYTPTSPK 1777
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP
Sbjct: 1778 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1815
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1639 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1690
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1721
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1646 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1697
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1728
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1653 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1704
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1735
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1660 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1711
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1742
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1667 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1718
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1719 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1749
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1772 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1819
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1820 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1850
Score = 77.4 bits (189), Expect = 6e-13
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1674 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1725
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPT---YSP 525
YSPTSP YSPTSP YSPTSP YSP+SPT Y+P
Sbjct: 1726 YSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTP 1759
Score = 76.6 bits (187), Expect = 1e-12
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1681 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1732
Query: 433 YSPTSPGYSPTSPGY---SPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y SPTSP Y+PTSP+YSP
Sbjct: 1733 YSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSP 1766
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1796 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1840
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1841 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1873
Score = 72.4 bits (176), Expect = 2e-11
Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1695 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPN 1746
Query: 433 YSP---TSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP TSP Y+PTSP YSP+SP Y+PTSP YSP
Sbjct: 1747 YSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSP 1780
[47][TOP]
>UniRef100_UPI00005A0B29 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 20 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B29
Length = 1891
Score = 167 bits (424), Expect = 3e-40
Identities = 102/236 (43%), Positives = 124/236 (52%), Gaps = 61/236 (25%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1385 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1444
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMT----------------- 255
+ E K +E+ PS M G+ MT
Sbjct: 1445 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYDPDPGAG 1504
Query: 256 --------------------------PARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA 357
PA SP G+P G SP Y+ SP +SP
Sbjct: 1505 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSP---- 1559
Query: 358 QFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP A+ P S GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1560 SYSP--TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1613
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1566 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1620
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1621 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1662
Score = 87.8 bits (216), Expect = 4e-16
Identities = 52/98 (53%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
TP S T SPNY +SPN +P S +++P ++SPSS SP
Sbjct: 1724 TPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSP-KYTPT--SPSYSPSSPEYTPTSPK 1780
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP
Sbjct: 1781 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1818
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1608 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1659
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1660 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1690
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1615 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1666
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1697
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1622 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1673
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1674 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1704
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1629 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1680
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1681 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1711
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1636 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1687
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1718
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1650 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1701
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1702 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1732
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1657 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1708
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1709 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1739
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1775 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1822
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1823 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1853
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/91 (48%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSPS P
Sbjct: 1671 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PNYSPSRPN 1722
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP Y+P SP YSP
Sbjct: 1723 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSP 1753
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1799 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1843
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1844 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1876
Score = 70.5 bits (171), Expect = 7e-11
Identities = 43/93 (46%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP +SPS P Y+P+SP
Sbjct: 1678 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPSR-PNYTPTSPS 1729
Query: 433 YSPTSPGYSPTSPGYSPTSPGYS--PTSPTYSP 525
YSPTSP YSPTSP Y+P SP YS PTSP Y+P
Sbjct: 1730 YSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTP 1762
[48][TOP]
>UniRef100_UPI00005A0B28 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 19 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B28
Length = 1908
Score = 167 bits (424), Expect = 3e-40
Identities = 102/236 (43%), Positives = 124/236 (52%), Gaps = 61/236 (25%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1402 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1461
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMT----------------- 255
+ E K +E+ PS M G+ MT
Sbjct: 1462 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYDPDPGAG 1521
Query: 256 --------------------------PARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA 357
PA SP G+P G SP Y+ SP +SP
Sbjct: 1522 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSP---- 1576
Query: 358 QFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP A+ P S GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1577 SYSP--TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1630
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1583 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1637
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1638 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1679
Score = 87.8 bits (216), Expect = 4e-16
Identities = 52/98 (53%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
TP S T SPNY +SPN +P S +++P ++SPSS SP
Sbjct: 1741 TPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSP-KYTPT--SPSYSPSSPEYTPTSPK 1797
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP
Sbjct: 1798 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1835
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1625 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1676
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1707
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1632 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1683
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1714
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1639 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1690
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1721
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1646 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1697
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1728
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1653 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1704
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1735
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1667 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1718
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1719 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1749
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1674 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1725
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1726 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1756
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1792 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1839
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1840 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1870
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/91 (48%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSPS P
Sbjct: 1688 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PNYSPSRPN 1739
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP Y+P SP YSP
Sbjct: 1740 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSP 1770
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1816 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1860
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1861 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1893
Score = 70.5 bits (171), Expect = 7e-11
Identities = 43/93 (46%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP +SPS P Y+P+SP
Sbjct: 1695 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPSR-PNYTPTSPS 1746
Query: 433 YSPTSPGYSPTSPGYSPTSPGYS--PTSPTYSP 525
YSPTSP YSPTSP Y+P SP YS PTSP Y+P
Sbjct: 1747 YSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTP 1779
[49][TOP]
>UniRef100_UPI00005A0B24 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 15 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B24
Length = 1924
Score = 167 bits (424), Expect = 3e-40
Identities = 102/236 (43%), Positives = 124/236 (52%), Gaps = 61/236 (25%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1418 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1477
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMT----------------- 255
+ E K +E+ PS M G+ MT
Sbjct: 1478 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYDPDPGAG 1537
Query: 256 --------------------------PARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA 357
PA SP G+P G SP Y+ SP +SP
Sbjct: 1538 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSP---- 1592
Query: 358 QFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP A+ P S GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1593 SYSP--TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1646
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1599 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1653
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1654 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1695
Score = 87.8 bits (216), Expect = 4e-16
Identities = 52/98 (53%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
TP S T SPNY +SPN +P S +++P ++SPSS SP
Sbjct: 1757 TPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSP-KYTPT--SPSYSPSSPEYTPTSPK 1813
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP
Sbjct: 1814 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1851
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1641 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1692
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1693 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1723
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1648 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1699
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1700 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1730
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1655 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1706
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1707 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1737
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1662 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1713
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1714 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1744
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1669 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1720
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1721 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1751
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1683 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1734
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1735 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1765
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1690 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1741
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1742 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1772
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1808 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1855
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1856 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1886
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/91 (48%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSPS P
Sbjct: 1704 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PNYSPSRPN 1755
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP Y+P SP YSP
Sbjct: 1756 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSP 1786
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1832 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1876
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1877 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1909
Score = 70.5 bits (171), Expect = 7e-11
Identities = 43/93 (46%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP +SPS P Y+P+SP
Sbjct: 1711 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPSR-PNYTPTSPS 1762
Query: 433 YSPTSPGYSPTSPGYSPTSPGYS--PTSPTYSP 525
YSPTSP YSPTSP Y+P SP YS PTSP Y+P
Sbjct: 1763 YSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTP 1795
[50][TOP]
>UniRef100_UPI00005A0B21 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 12 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B21
Length = 1922
Score = 167 bits (424), Expect = 3e-40
Identities = 102/236 (43%), Positives = 124/236 (52%), Gaps = 61/236 (25%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1416 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1475
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMT----------------- 255
+ E K +E+ PS M G+ MT
Sbjct: 1476 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYDPDPGAG 1535
Query: 256 --------------------------PARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA 357
PA SP G+P G SP Y+ SP +SP
Sbjct: 1536 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSP---- 1590
Query: 358 QFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP A+ P S GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1591 SYSP--TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1644
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1597 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1651
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1652 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1693
Score = 87.8 bits (216), Expect = 4e-16
Identities = 52/98 (53%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
TP S T SPNY +SPN +P S +++P ++SPSS SP
Sbjct: 1755 TPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSP-KYTPT--SPSYSPSSPEYTPTSPK 1811
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP
Sbjct: 1812 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1849
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1639 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1690
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1721
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1646 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1697
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1728
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1653 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1704
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1735
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1660 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1711
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1742
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1667 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1718
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1719 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1749
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1681 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1732
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1733 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1763
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1688 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1739
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1740 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1770
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1806 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1853
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1854 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1884
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/91 (48%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSPS P
Sbjct: 1702 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PNYSPSRPN 1753
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP Y+P SP YSP
Sbjct: 1754 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSP 1784
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1830 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1874
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1875 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1907
Score = 70.5 bits (171), Expect = 7e-11
Identities = 43/93 (46%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP +SPS P Y+P+SP
Sbjct: 1709 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPSR-PNYTPTSPS 1760
Query: 433 YSPTSPGYSPTSPGYSPTSPGYS--PTSPTYSP 525
YSPTSP YSPTSP Y+P SP YS PTSP Y+P
Sbjct: 1761 YSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTP 1793
[51][TOP]
>UniRef100_UPI00005A0B20 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 11 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B20
Length = 1923
Score = 167 bits (424), Expect = 3e-40
Identities = 102/236 (43%), Positives = 124/236 (52%), Gaps = 61/236 (25%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1417 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1476
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMT----------------- 255
+ E K +E+ PS M G+ MT
Sbjct: 1477 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYDPDPGAG 1536
Query: 256 --------------------------PARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA 357
PA SP G+P G SP Y+ SP +SP
Sbjct: 1537 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSP---- 1591
Query: 358 QFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP A+ P S GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1592 SYSP--TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1645
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1652
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694
Score = 87.8 bits (216), Expect = 4e-16
Identities = 52/98 (53%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
TP S T SPNY +SPN +P S +++P ++SPSS SP
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSP-KYTPT--SPSYSPSSPEYTPTSPK 1812
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP
Sbjct: 1813 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1850
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1640 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1691
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1722
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1647 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1698
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1729
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1736
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1661 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1712
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1743
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1668 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1719
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1750
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1682 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1733
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1734 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1764
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1689 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1740
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1741 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1771
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1807 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1854
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1855 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1885
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/91 (48%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSPS P
Sbjct: 1703 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PNYSPSRPN 1754
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP Y+P SP YSP
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSP 1785
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1831 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1875
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1876 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1908
Score = 70.5 bits (171), Expect = 7e-11
Identities = 43/93 (46%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP +SPS P Y+P+SP
Sbjct: 1710 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPSR-PNYTPTSPS 1761
Query: 433 YSPTSPGYSPTSPGYSPTSPGYS--PTSPTYSP 525
YSPTSP YSPTSP Y+P SP YS PTSP Y+P
Sbjct: 1762 YSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTP 1794
[52][TOP]
>UniRef100_UPI00005A0B17 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B17
Length = 1788
Score = 167 bits (424), Expect = 3e-40
Identities = 102/236 (43%), Positives = 124/236 (52%), Gaps = 61/236 (25%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1416 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1475
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMT----------------- 255
+ E K +E+ PS M G+ MT
Sbjct: 1476 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYDPDPGAG 1535
Query: 256 --------------------------PARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA 357
PA SP G+P G SP Y+ SP +SP
Sbjct: 1536 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSP---- 1590
Query: 358 QFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP A+ P S GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1591 SYSP--TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1644
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1597 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1651
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1652 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1693
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1639 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1690
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1721
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1646 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1697
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1728
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1653 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1704
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1735
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1660 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1711
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1742
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1667 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1718
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1719 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1749
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1681 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1732
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1733 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1763
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1688 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1739
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1740 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1770
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/91 (48%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSPS P
Sbjct: 1702 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PNYSPSRPN 1753
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP Y+P SP YSP
Sbjct: 1754 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSP 1784
Score = 70.1 bits (170), Expect = 9e-11
Identities = 41/87 (47%), Positives = 51/87 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP +SPS P Y+P+SP
Sbjct: 1709 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPSR-PNYTPTSPS 1760
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSP 513
YSPTSP YSPTSP Y+P SP YSPTSP
Sbjct: 1761 YSPTSPSYSPTSPNYTPMSPNYSPTSP 1787
[53][TOP]
>UniRef100_UPI00005A0B16 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B16
Length = 1922
Score = 167 bits (424), Expect = 3e-40
Identities = 102/236 (43%), Positives = 124/236 (52%), Gaps = 61/236 (25%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1416 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1475
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMT----------------- 255
+ E K +E+ PS M G+ MT
Sbjct: 1476 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYDPDPGAG 1535
Query: 256 --------------------------PARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA 357
PA SP G+P G SP Y+ SP +SP
Sbjct: 1536 SGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSP---- 1590
Query: 358 QFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP A+ P S GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1591 SYSP--TSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1644
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1597 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1651
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1652 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1693
Score = 87.8 bits (216), Expect = 4e-16
Identities = 52/98 (53%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
TP S T SPNY +SPN +P S +++P ++SPSS SP
Sbjct: 1755 TPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSP-KYTPT--SPSYSPSSPEYTPTSPK 1811
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP
Sbjct: 1812 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 1849
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1639 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1690
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1721
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1646 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1697
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1728
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1653 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1704
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1705 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1735
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1660 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1711
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1712 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1742
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1667 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1718
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1719 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1749
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1681 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1732
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1733 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1763
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1688 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1739
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1740 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1770
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1806 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1853
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1854 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1884
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/91 (48%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSPS P
Sbjct: 1702 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PNYSPSRPN 1753
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP Y+P SP YSP
Sbjct: 1754 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSP 1784
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1830 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1874
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1875 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1907
Score = 70.5 bits (171), Expect = 7e-11
Identities = 43/93 (46%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP +SPS P Y+P+SP
Sbjct: 1709 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPSR-PNYTPTSPS 1760
Query: 433 YSPTSPGYSPTSPGYSPTSPGYS--PTSPTYSP 525
YSPTSP YSPTSP Y+P SP YS PTSP Y+P
Sbjct: 1761 YSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTP 1793
[54][TOP]
>UniRef100_UPI0001B7A25C UPI0001B7A25C related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25C
Length = 1968
Score = 167 bits (424), Expect = 3e-40
Identities = 109/231 (47%), Positives = 127/231 (54%), Gaps = 56/231 (24%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1418 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1477
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMTP----------ARSPVS 276
+ E K +E+ PS M G+ MTP A SP
Sbjct: 1478 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSV 1537
Query: 277 G---TPYHEGM----------MSPNY--LLSPNMRLSPMSDAQFSPYV--GGMAFSPSSS 405
G TP G SP Y SP SP S SPY+ G A SPS S
Sbjct: 1538 GDGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPG-SPGSPGPSSPYIPSPGGAMSPSYS 1596
Query: 406 P-----------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1597 PTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1647
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1600 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1654
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1655 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1696
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1642 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1693
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1694 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1724
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1649 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1700
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1701 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1731
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1656 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1707
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1708 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1738
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1663 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1714
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1715 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1745
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1670 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1721
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1722 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1752
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1684 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1735
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP+YSP
Sbjct: 1736 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 1766
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1691 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1742
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 1743 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 1773
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + + SP ++SP+S P YSP+SP
Sbjct: 1726 SPSYSPTSPS---YSPTSPSYSPTSPNYSPTSPNYTPTSP-----SYSPTS-PSYSPTSP 1776
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1777 NYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1808
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SPNY SPN + S + SP ++SP+S P Y+P+SP
Sbjct: 1733 SPSYSPTSPS---YSPTSPNYSPTSPNYTPTSPSYSPTSP-----SYSPTS-PNYTPTSP 1783
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP Y+P
Sbjct: 1784 NYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP 1815
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP Y +P S +SP ++SP+S SP Y
Sbjct: 1796 SPSYSPTSPS---YSPSSPRY--TPQSPTYTPSSPSYSP--SSPSYSPTSPKYTPTSPSY 1848
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1849 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1885
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP +SP+S SP Y
Sbjct: 1712 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPTSPNYTPTSPSY 1764
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 1765 SPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 1801
Score = 80.1 bits (196), Expect = 9e-14
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP+ + +++P ++SPSS SP YSP+SP YSPTSP YSPT
Sbjct: 1824 SPSY--SPSSPSYSPTSPKYTPT--SPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1879
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSPT+P YSPTSPTYSP
Sbjct: 1880 SPTYSPTTPKYSPTSPTYSP 1899
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1856 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1903
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1904 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1934
Score = 74.7 bits (182), Expect = 4e-12
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
TP S T SPNY SPN SP S + +SP+S P YSP+SP
Sbjct: 1758 TPTSPSYSPTSPSYSPTSPNYTPTSPNY--SPTSPS----------YSPTS-PSYSPTSP 1804
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP Y+P SP Y+P+SP YSP+SP+YSP
Sbjct: 1805 SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSP 1836
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1880 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1924
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1925 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1957
[55][TOP]
>UniRef100_UPI0000DA33D8 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Rattus norvegicus RepID=UPI0000DA33D8
Length = 1970
Score = 167 bits (424), Expect = 3e-40
Identities = 109/231 (47%), Positives = 127/231 (54%), Gaps = 56/231 (24%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1416 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1475
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMTP----------ARSPVS 276
+ E K +E+ PS M G+ MTP A SP
Sbjct: 1476 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSV 1535
Query: 277 G---TPYHEGM----------MSPNY--LLSPNMRLSPMSDAQFSPYV--GGMAFSPSSS 405
G TP G SP Y SP SP S SPY+ G A SPS S
Sbjct: 1536 GSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPG-SPGSPGPSSPYIPSPGGAMSPSYS 1594
Query: 406 P-----------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1595 PTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1645
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1652
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1640 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1691
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1722
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1647 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1698
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1729
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1736
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1661 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1712
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1743
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1668 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1719
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1750
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1682 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1733
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP+YSP
Sbjct: 1734 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 1764
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1689 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1740
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 1771
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + + SP ++SP+S P YSP+SP
Sbjct: 1724 SPSYSPTSPS---YSPTSPSYSPTSPNYSPTSPNYTPTSP-----SYSPTS-PSYSPTSP 1774
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1775 NYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1806
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SPNY SPN + S + SP ++SP+S P Y+P+SP
Sbjct: 1731 SPSYSPTSPS---YSPTSPNYSPTSPNYTPTSPSYSPTSP-----SYSPTS-PNYTPTSP 1781
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP Y+P
Sbjct: 1782 NYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP 1813
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP Y +P S +SP ++SP+S SP Y
Sbjct: 1794 SPSYSPTSPS---YSPSSPRY--TPQSPTYTPSSPSYSP--SSPSYSPTSPKYTPTSPSY 1846
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1847 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1883
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP +SP+S SP Y
Sbjct: 1710 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPTSPNYTPTSPSY 1762
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 1763 SPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 1799
Score = 80.1 bits (196), Expect = 9e-14
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP+ + +++P ++SPSS SP YSP+SP YSPTSP YSPT
Sbjct: 1822 SPSY--SPSSPSYSPTSPKYTPT--SPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSPT+P YSPTSPTYSP
Sbjct: 1878 SPTYSPTTPKYSPTSPTYSP 1897
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1854 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1901
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1902 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Score = 74.7 bits (182), Expect = 4e-12
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
TP S T SPNY SPN SP S + +SP+S P YSP+SP
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNY--SPTSPS----------YSPTS-PSYSPTSP 1802
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP Y+P SP Y+P+SP YSP+SP+YSP
Sbjct: 1803 SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSP 1834
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1878 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1922
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1923 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1955
[56][TOP]
>UniRef100_UPI0001951285 220 kDa DNA-directed RNA polymerase polypeptide A n=1 Tax=Canis lupus
familiaris RepID=UPI0001951285
Length = 1969
Score = 167 bits (424), Expect = 3e-40
Identities = 109/231 (47%), Positives = 127/231 (54%), Gaps = 56/231 (24%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1416 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1475
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMTP----------ARSPVS 276
+ E K +E+ PS M G+ MTP A SP
Sbjct: 1476 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSV 1535
Query: 277 G---TPYHEGM----------MSPNY--LLSPNMRLSPMSDAQFSPYV--GGMAFSPSSS 405
G TP G SP Y SP SP S SPY+ G A SPS S
Sbjct: 1536 GSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPG-SPGSPGPSSPYIPSPGGAMSPSYS 1594
Query: 406 P-----------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1595 PTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1645
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1652
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1640 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1691
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1722
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1647 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1698
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1729
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1736
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1661 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1712
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1743
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1668 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1719
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1750
Score = 83.2 bits (204), Expect = 1e-14
Identities = 57/122 (46%), Positives = 65/122 (53%), Gaps = 31/122 (25%)
Frame = +1
Query: 253 TPARSPVSG--TPYHEGMMSPNYL-LSPNMRLSPM----------SDAQFSPYV-----G 378
+P+ SP S TP MSPNY SPN SP S +++P
Sbjct: 1766 SPSYSPTSPNYTP-----MSPNYSPTSPNSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1820
Query: 379 GMAFSPSS-------------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY 519
++SPSS SP YSPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTY
Sbjct: 1821 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTY 1880
Query: 520 SP 525
SP
Sbjct: 1881 SP 1882
Score = 80.1 bits (196), Expect = 9e-14
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP+ + +++P ++SPSS SP YSP+SP YSPTSP YSPT
Sbjct: 1821 SPSY--SPSSPSYSPTSPKYTPT--SPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1876
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSPT+P YSPTSPTYSP
Sbjct: 1877 SPTYSPTTPKYSPTSPTYSP 1896
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1682 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1733
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1734 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1764
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1689 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1740
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1741 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1771
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1853 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1900
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1901 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1931
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/91 (48%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSPS P
Sbjct: 1703 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PNYSPSRPN 1754
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP Y+P SP YSP
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSP 1785
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1877 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1921
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1922 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1954
Score = 71.6 bits (174), Expect = 3e-11
Identities = 46/104 (44%), Positives = 56/104 (53%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP +SPS P Y+P+SP
Sbjct: 1710 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPSR-PNYTPTSPS 1761
Query: 433 YSPTSPGYSPTSPGY-------------SPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y SPTSP YSPTSP+YSP
Sbjct: 1762 YSPTSPSYSPTSPNYTPMSPNYSPTSPNSPTSPSYSPTSPSYSP 1805
Score = 70.5 bits (171), Expect = 7e-11
Identities = 46/104 (44%), Positives = 60/104 (57%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLS-PNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+P+ SP S + SPNY S PN + S + SP ++SP+S SP
Sbjct: 1731 SPSYSPTSPS---YSPTSPNYSPSRPNYTPTSPSYSPTSP-----SYSPTSPNYTPMSPN 1782
Query: 412 YSPSSPG------YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSP YSP+SP Y+P SP Y+P+SP+YSP
Sbjct: 1783 YSPTSPNSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSP 1826
[57][TOP]
>UniRef100_O35559 DNA-directed RNA polymerase n=1 Tax=Cricetulus griseus
RepID=O35559_CRIGR
Length = 1970
Score = 167 bits (424), Expect = 3e-40
Identities = 109/231 (47%), Positives = 127/231 (54%), Gaps = 56/231 (24%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1416 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1475
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMTP----------ARSPVS 276
+ E K +E+ PS M G+ MTP A SP
Sbjct: 1476 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSV 1535
Query: 277 G---TPYHEGM----------MSPNY--LLSPNMRLSPMSDAQFSPYV--GGMAFSPSSS 405
G TP G SP Y SP SP S SPY+ G A SPS S
Sbjct: 1536 GSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPG-SPGSPGPSSPYIPSPGGAMSPSYS 1594
Query: 406 P-----------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1595 PTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1645
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1652
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1640 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1691
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1722
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1647 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1698
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1729
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1736
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1661 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1712
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1743
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1668 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1719
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1750
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1682 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1733
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP+YSP
Sbjct: 1734 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 1764
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1689 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1740
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 1771
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + + SP ++SP+S P YSP+SP
Sbjct: 1724 SPSYSPTSPS---YSPTSPSYSPTSPNYSPTSPNYTPTSP-----SYSPTS-PSYSPTSP 1774
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1775 NYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1806
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SPNY SPN + S + SP ++SP+S P Y+P+SP
Sbjct: 1731 SPSYSPTSPS---YSPTSPNYSPTSPNYTPTSPSYSPTSP-----SYSPTS-PNYTPTSP 1781
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP Y+P
Sbjct: 1782 NYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP 1813
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP Y +P S +SP ++SP+S SP Y
Sbjct: 1794 SPSYSPTSPS---YSPSSPRY--TPQSPTYTPSSPSYSP--SSPSYSPTSPKYTPTSPSY 1846
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1847 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1883
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP +SP+S SP Y
Sbjct: 1710 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPTSPNYTPTSPSY 1762
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 1763 SPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 1799
Score = 80.1 bits (196), Expect = 9e-14
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP+ + +++P ++SPSS SP YSP+SP YSPTSP YSPT
Sbjct: 1822 SPSY--SPSSPSYSPTSPKYTPT--SPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSPT+P YSPTSPTYSP
Sbjct: 1878 SPTYSPTTPKYSPTSPTYSP 1897
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1854 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1901
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1902 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Score = 74.7 bits (182), Expect = 4e-12
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
TP S T SPNY SPN SP S + +SP+S P YSP+SP
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNY--SPTSPS----------YSPTS-PSYSPTSP 1802
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP Y+P SP Y+P+SP YSP+SP+YSP
Sbjct: 1803 SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSP 1834
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1878 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1922
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1923 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1955
[58][TOP]
>UniRef100_O08847 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=O08847_MOUSE
Length = 1966
Score = 167 bits (424), Expect = 3e-40
Identities = 109/231 (47%), Positives = 127/231 (54%), Gaps = 56/231 (24%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1416 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1475
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMTP----------ARSPVS 276
+ E K +E+ PS M G+ MTP A SP
Sbjct: 1476 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSV 1535
Query: 277 G---TPYHEGM----------MSPNY--LLSPNMRLSPMSDAQFSPYV--GGMAFSPSSS 405
G TP G SP Y SP SP S SPY+ G A SPS S
Sbjct: 1536 GSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPG-SPGSPGPSSPYIPSPGGAMSPSYS 1594
Query: 406 P-----------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1595 PTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1645
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1652
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1640 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1691
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1722
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1647 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1698
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1729
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1736
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1661 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1712
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1743
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1668 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1719
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1750
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1682 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1733
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP+YSP
Sbjct: 1734 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 1764
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1689 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1740
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 1771
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + + SP ++SP+S P YSP+SP
Sbjct: 1724 SPSYSPTSPS---YSPTSPSYSPTSPNYSPTSPNYTPTSP-----SYSPTS-PSYSPTSP 1774
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1775 NYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1806
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SPNY SPN + S + SP ++SP+S P Y+P+SP
Sbjct: 1731 SPSYSPTSPS---YSPTSPNYSPTSPNYTPTSPSYSPTSP-----SYSPTS-PNYTPTSP 1781
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP Y+P
Sbjct: 1782 NYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP 1813
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP +SP+S SP Y
Sbjct: 1710 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPTSPNYTPTSPSY 1762
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 1763 SPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 1799
Score = 80.9 bits (198), Expect = 5e-14
Identities = 48/97 (49%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP Y +P S +SP ++SP+S SP Y
Sbjct: 1794 SPSYSPTSPS---YSPSSPRY--TPQSPTYTPSSPSYSP--SSPSYSPTSPKYTPTSPSY 1846
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPSSP Y+P SP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1847 SPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSP 1883
Score = 80.1 bits (196), Expect = 9e-14
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP+ + +++P ++SPSS SP YSP+SP YSPTSP YSPT
Sbjct: 1822 SPSY--SPSSPSYSPTSPKYTPT--SPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPT 1877
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSPT+P YSPTSPTYSP
Sbjct: 1878 SPTYSPTTPKYSPTSPTYSP 1897
Score = 80.1 bits (196), Expect = 9e-14
Identities = 46/91 (50%), Positives = 52/91 (57%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TPA S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1854 TPASPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1901
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1902 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Score = 74.7 bits (182), Expect = 4e-12
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
TP S T SPNY SPN SP S + +SP+S P YSP+SP
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNY--SPTSPS----------YSPTS-PSYSPTSP 1802
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP Y+P SP Y+P+SP YSP+SP+YSP
Sbjct: 1803 SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSP 1834
Score = 68.2 bits (165), Expect = 3e-10
Identities = 46/93 (49%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP+S P YSP+SP
Sbjct: 1878 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSPT--SPTYSPTS-PKYSPTSPT 1929
Query: 433 YSPTSPG---YSPTSPGYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSPGYSPTSP YS TSP S
Sbjct: 1930 YSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAIS 1962
[59][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
RepID=Q9AXN0_9RHOD
Length = 1746
Score = 167 bits (424), Expect = 3e-40
Identities = 103/225 (45%), Positives = 123/225 (54%), Gaps = 50/225 (22%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR +TG LMRCSFEET DILL+AA Y E D ++GV ENIMLGQ+AP+GTG+ L L
Sbjct: 1412 RHGINRVETGALMRCSFEETADILLEAAMYGEVDDMKGVAENIMLGQMAPVGTGEFGLLL 1471
Query: 181 NDEMLKNAIELQ---------LPSYMDGLE------------FGMTPAR----------- 264
N++ LKN I + L S G + + TP +
Sbjct: 1472 NEKALKNLITAEEDARTPRAGLMSPAHGFDTPRAFDAGSMTPYPATPGQATPSYPYTPIG 1531
Query: 265 ---SPVSGTPYHEGMMSPN----YLLSPNMRLSPMSDAQFSPY--VGGMAFSPSS----- 402
SP + +PY + SP SP + +A SPY G +SP S
Sbjct: 1532 GQFSPFAASPYGDAAFSPTPTSPAYASPYGTAASPFNAMASPYSRAGNAFYSPRSPSSPG 1591
Query: 403 ----SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPGYSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1592 GVAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSP 1636
Score = 85.5 bits (210), Expect = 2e-15
Identities = 49/91 (53%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S T SP Y + M SP S A GG+++SPSS P YSPSSP
Sbjct: 1638 SPTYSPTSPT---YSPTSPTYSPTSPM-YSPSSPAMSPARAGGVSYSPSS-PHYSPSSPQ 1692
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSP+SP YSP+SP YSP+SP YSP
Sbjct: 1693 YSPSSPHYSPSSPHYSPSSPQYSPSSPQYSP 1723
Score = 65.9 bits (159), Expect = 2e-09
Identities = 39/85 (45%), Positives = 48/85 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP SP+Y SP+ S +SP +SPSS P YSPSSP
Sbjct: 1666 SPAMSPARAGGVSYSPSSPHY--SPSSPQYSPSSPHYSP--SSPHYSPSS-PQYSPSSPQ 1720
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPT 507
YSP+SP YSP+SP YSP+SP + T
Sbjct: 1721 YSPSSPAYSPSSPAYSPSSPAHPST 1745
[60][TOP]
>UniRef100_B4DET1 cDNA FLJ53860, highly similar to DNA-directed RNA polymerase II
largest subunit (EC 2.7.7.6) n=1 Tax=Homo sapiens
RepID=B4DET1_HUMAN
Length = 855
Score = 167 bits (424), Expect = 3e-40
Identities = 109/231 (47%), Positives = 127/231 (54%), Gaps = 56/231 (24%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 315 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 374
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMTP----------ARSPVS 276
+ E K +E+ PS M G+ MTP A SP
Sbjct: 375 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSV 434
Query: 277 G---TPYHEGM----------MSPNY--LLSPNMRLSPMSDAQFSPYV--GGMAFSPSSS 405
G TP G SP Y SP SP S SPY+ G A SPS S
Sbjct: 435 GSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPG-SPGSPGPSSPYIPSPGGAMSPSYS 493
Query: 406 P-----------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 494 PTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 544
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 497 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 551
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 552 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 593
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 539 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 590
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 591 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 621
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 546 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 597
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 628
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 553 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 604
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 635
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 560 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 611
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 612 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 642
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 567 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 618
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 619 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 649
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 581 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 632
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP+YSP
Sbjct: 633 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 663
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 588 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 639
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 640 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 670
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + + SP ++SP+S P YSP+SP
Sbjct: 623 SPSYSPTSPS---YSPTSPSYSPTSPNYSPTSPNYTPTSP-----SYSPTS-PSYSPTSP 673
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 674 NYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 705
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SPNY SPN + S + SP ++SP+S P Y+P+SP
Sbjct: 630 SPSYSPTSPS---YSPTSPNYSPTSPNYTPTSPSYSPTSP-----SYSPTS-PNYTPTSP 680
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP Y+P
Sbjct: 681 NYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP 712
Score = 82.8 bits (203), Expect = 1e-14
Identities = 48/91 (52%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP+ SP Q Y SSP YSP+SP
Sbjct: 686 SPSYSPTSPS---YSPTSPSY--SPS---SPRYTPQSPTYTPSSPSYSPSSPSYSPTSPK 737
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 738 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 768
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP +SP+S SP Y
Sbjct: 609 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPTSPNYTPTSPSY 661
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 662 SPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 698
Score = 80.9 bits (198), Expect = 5e-14
Identities = 48/97 (49%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP Y +P S +SP ++SP+S SP Y
Sbjct: 693 SPSYSPTSPS---YSPSSPRY--TPQSPTYTPSSPSYSP--SSPSYSPTSPKYTPTSPKY 745
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP
Sbjct: 746 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSP 782
Score = 77.0 bits (188), Expect = 7e-13
Identities = 44/91 (48%), Positives = 50/91 (54%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 739 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 786
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPT P YSPTSP YSPTSPTYSP
Sbjct: 787 YTPTSPKYSPTGPTYSPTSPKYSPTSPTYSP 817
Score = 73.2 bits (178), Expect = 1e-11
Identities = 48/94 (51%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP G +SP+S P YSP+SP
Sbjct: 763 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSPT--GPTYSPTS-PKYSPTSPT 814
Query: 433 YSPTSPG---YSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSPGYSPTSP YS TSP SP
Sbjct: 815 YSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 848
[61][TOP]
>UniRef100_A6NN93 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=A6NN93_HUMAN
Length = 1970
Score = 167 bits (424), Expect = 3e-40
Identities = 109/231 (47%), Positives = 127/231 (54%), Gaps = 56/231 (24%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1416 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1475
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMTP----------ARSPVS 276
+ E K +E+ PS M G+ MTP A SP
Sbjct: 1476 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSV 1535
Query: 277 G---TPYHEGM----------MSPNY--LLSPNMRLSPMSDAQFSPYV--GGMAFSPSSS 405
G TP G SP Y SP SP S SPY+ G A SPS S
Sbjct: 1536 GSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPG-SPGSPGPSSPYIPSPGGAMSPSYS 1594
Query: 406 P-----------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1595 PTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1645
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1652
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1640 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1691
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1722
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1647 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1698
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1729
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1736
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1661 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1712
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1743
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1668 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1719
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1750
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1682 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1733
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP+YSP
Sbjct: 1734 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 1764
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1689 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1740
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 1771
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + + SP ++SP+S P YSP+SP
Sbjct: 1724 SPSYSPTSPS---YSPTSPSYSPTSPNYSPTSPNYTPTSP-----SYSPTS-PSYSPTSP 1774
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1775 NYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1806
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SPNY SPN + S + SP ++SP+S P Y+P+SP
Sbjct: 1731 SPSYSPTSPS---YSPTSPNYSPTSPNYTPTSPSYSPTSP-----SYSPTS-PNYTPTSP 1781
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP Y+P
Sbjct: 1782 NYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP 1813
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP Y +P S +SP ++SP+S SP Y
Sbjct: 1794 SPSYSPTSPS---YSPSSPRY--TPQSPTYTPSSPSYSP--SSPSYSPASPKYTPTSPSY 1846
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1847 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1883
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP +SP+S SP Y
Sbjct: 1710 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPTSPNYTPTSPSY 1762
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 1763 SPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 1799
Score = 80.1 bits (196), Expect = 9e-14
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP+ + +++P ++SPSS SP YSP+SP YSPTSP YSPT
Sbjct: 1822 SPSY--SPSSPSYSPASPKYTPT--SPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSPT+P YSPTSPTYSP
Sbjct: 1878 SPTYSPTTPKYSPTSPTYSP 1897
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1854 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1901
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1902 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Score = 74.7 bits (182), Expect = 4e-12
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
TP S T SPNY SPN SP S + +SP+S P YSP+SP
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNY--SPTSPS----------YSPTS-PSYSPTSP 1802
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP Y+P SP Y+P+SP YSP+SP+YSP
Sbjct: 1803 SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSP 1834
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1878 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1922
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1923 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1955
[62][TOP]
>UniRef100_P08775 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Mus musculus
RepID=RPB1_MOUSE
Length = 1970
Score = 167 bits (424), Expect = 3e-40
Identities = 109/231 (47%), Positives = 127/231 (54%), Gaps = 56/231 (24%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1416 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1475
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMTP----------ARSPVS 276
+ E K +E+ PS M G+ MTP A SP
Sbjct: 1476 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSV 1535
Query: 277 G---TPYHEGM----------MSPNY--LLSPNMRLSPMSDAQFSPYV--GGMAFSPSSS 405
G TP G SP Y SP SP S SPY+ G A SPS S
Sbjct: 1536 GSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPG-SPGSPGPSSPYIPSPGGAMSPSYS 1594
Query: 406 P-----------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1595 PTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1645
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1652
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1640 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1691
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1722
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1647 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1698
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1729
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1736
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1661 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1712
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1743
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1668 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1719
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1750
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1682 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1733
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP+YSP
Sbjct: 1734 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 1764
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1689 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1740
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 1771
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + + SP ++SP+S P YSP+SP
Sbjct: 1724 SPSYSPTSPS---YSPTSPSYSPTSPNYSPTSPNYTPTSP-----SYSPTS-PSYSPTSP 1774
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1775 NYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1806
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SPNY SPN + S + SP ++SP+S P Y+P+SP
Sbjct: 1731 SPSYSPTSPS---YSPTSPNYSPTSPNYTPTSPSYSPTSP-----SYSPTS-PNYTPTSP 1781
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP Y+P
Sbjct: 1782 NYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP 1813
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP +SP+S SP Y
Sbjct: 1710 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPTSPNYTPTSPSY 1762
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 1763 SPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 1799
Score = 80.9 bits (198), Expect = 5e-14
Identities = 48/97 (49%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP Y +P S +SP ++SP+S SP Y
Sbjct: 1794 SPSYSPTSPS---YSPSSPRY--TPQSPTYTPSSPSYSP--SSPSYSPTSPKYTPTSPSY 1846
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPSSP Y+P SP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1847 SPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSP 1883
Score = 80.1 bits (196), Expect = 9e-14
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP+ + +++P ++SPSS SP YSP+SP YSPTSP YSPT
Sbjct: 1822 SPSY--SPSSPSYSPTSPKYTPT--SPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPT 1877
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSPT+P YSPTSPTYSP
Sbjct: 1878 SPTYSPTTPKYSPTSPTYSP 1897
Score = 80.1 bits (196), Expect = 9e-14
Identities = 46/91 (50%), Positives = 52/91 (57%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TPA S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1854 TPASPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1901
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1902 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Score = 74.7 bits (182), Expect = 4e-12
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
TP S T SPNY SPN SP S + +SP+S P YSP+SP
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNY--SPTSPS----------YSPTS-PSYSPTSP 1802
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP Y+P SP Y+P+SP YSP+SP+YSP
Sbjct: 1803 SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSP 1834
Score = 70.9 bits (172), Expect = 5e-11
Identities = 47/94 (50%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP+S P YSP+SP
Sbjct: 1878 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSPT--SPTYSPTS-PKYSPTSPT 1929
Query: 433 YSPTSPG---YSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSPGYSPTSP YS TSP SP
Sbjct: 1930 YSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1963
[63][TOP]
>UniRef100_P24928 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Euarchontoglires
RepID=RPB1_HUMAN
Length = 1970
Score = 167 bits (424), Expect = 3e-40
Identities = 109/231 (47%), Positives = 127/231 (54%), Gaps = 56/231 (24%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1416 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1475
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMTP----------ARSPVS 276
+ E K +E+ PS M G+ MTP A SP
Sbjct: 1476 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSV 1535
Query: 277 G---TPYHEGM----------MSPNY--LLSPNMRLSPMSDAQFSPYV--GGMAFSPSSS 405
G TP G SP Y SP SP S SPY+ G A SPS S
Sbjct: 1536 GSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPG-SPGSPGPSSPYIPSPGGAMSPSYS 1594
Query: 406 P-----------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1595 PTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1645
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1652
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1640 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1691
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1722
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1647 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1698
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1729
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1736
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1661 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1712
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1743
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1668 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1719
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1750
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1682 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1733
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP+YSP
Sbjct: 1734 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 1764
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1689 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1740
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 1741 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 1771
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + + SP ++SP+S P YSP+SP
Sbjct: 1724 SPSYSPTSPS---YSPTSPSYSPTSPNYSPTSPNYTPTSP-----SYSPTS-PSYSPTSP 1774
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1775 NYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1806
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SPNY SPN + S + SP ++SP+S P Y+P+SP
Sbjct: 1731 SPSYSPTSPS---YSPTSPNYSPTSPNYTPTSPSYSPTSP-----SYSPTS-PNYTPTSP 1781
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP Y+P
Sbjct: 1782 NYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP 1813
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP Y +P S +SP ++SP+S SP Y
Sbjct: 1794 SPSYSPTSPS---YSPSSPRY--TPQSPTYTPSSPSYSP--SSPSYSPTSPKYTPTSPSY 1846
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1847 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1883
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP +SP+S SP Y
Sbjct: 1710 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPTSPNYTPTSPSY 1762
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 1763 SPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 1799
Score = 80.1 bits (196), Expect = 9e-14
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP+ + +++P ++SPSS SP YSP+SP YSPTSP YSPT
Sbjct: 1822 SPSY--SPSSPSYSPTSPKYTPT--SPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSPT+P YSPTSPTYSP
Sbjct: 1878 SPTYSPTTPKYSPTSPTYSP 1897
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1854 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 1901
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1902 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Score = 74.7 bits (182), Expect = 4e-12
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
TP S T SPNY SPN SP S + +SP+S P YSP+SP
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPTSPNY--SPTSPS----------YSPTS-PSYSPTSP 1802
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP Y+P SP Y+P+SP YSP+SP+YSP
Sbjct: 1803 SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSP 1834
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 1878 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 1922
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 1923 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 1955
[64][TOP]
>UniRef100_UPI00005A0B1A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 6 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1A
Length = 1767
Score = 167 bits (423), Expect = 4e-40
Identities = 98/226 (43%), Positives = 120/226 (53%), Gaps = 51/226 (22%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1401 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1460
Query: 181 NDEMLKNAIEL----------------------------QLPSY---------------- 228
+ E K +E+ P+Y
Sbjct: 1461 DAEKCKYGMEIPTNIPGLGAAGRDPMGGISPAMTPWNQGATPAYGAWSPRSGMTPGAAGF 1520
Query: 229 -------MDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMA 387
G G +PA SP G+P G SP Y+ SP +SP A
Sbjct: 1521 SPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGELSCGAMSPSYSP--TSPA 1577
Query: 388 FSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+ P S GY+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1578 YEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1623
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 1576 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 1630
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1631 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1672
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1618 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1669
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1700
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1625 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1676
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1707
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1632 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1683
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1714
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1639 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1690
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1721
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1646 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1697
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1698 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1728
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1660 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1711
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+ P Y+PTSP+YSP
Sbjct: 1712 YSPTSPSYSPTSPNYSPSRPNYTPTSPSYSP 1742
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1667 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1718
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+ P Y+PTSP YSPTSP+YSP
Sbjct: 1719 YSPTSPNYSPSRPNYTPTSPSYSPTSPSYSP 1749
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/91 (48%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSPS P
Sbjct: 1681 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PNYSPSRPN 1732
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP Y+P SP YSP
Sbjct: 1733 YTPTSPSYSPTSPSYSPTSPNYTPMSPNYSP 1763
Score = 70.1 bits (170), Expect = 9e-11
Identities = 41/87 (47%), Positives = 51/87 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP +SPS P Y+P+SP
Sbjct: 1688 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPSR-PNYTPTSPS 1739
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSP 513
YSPTSP YSPTSP Y+P SP YSPTSP
Sbjct: 1740 YSPTSPSYSPTSPNYTPMSPNYSPTSP 1766
[65][TOP]
>UniRef100_UPI00017B0A92 UPI00017B0A92 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0A92
Length = 1714
Score = 167 bits (423), Expect = 4e-40
Identities = 102/237 (43%), Positives = 124/237 (52%), Gaps = 62/237 (26%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTGPLM+CSFEETVD+L++A+++ E D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1393 RHGINRQDTGPLMKCSFEETVDVLMEASSHGECDPMKGVSENIMLGQLAPAGTGCFDLLL 1452
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMT----------------- 255
+ E K +E+ PS M G+ MT
Sbjct: 1453 DAEKCKYGMEIPTNIPGISVAGSTGMFFGSAPSPMSGMSPAMTPWNTGATPAYGAWSPSV 1512
Query: 256 ---------------------------PARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSD 354
PA SP G+P G SP Y+ SP +SP
Sbjct: 1513 GSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPASP-YIPSPGGAMSP--- 1568
Query: 355 AQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP A+ P S GY+P SPGYSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1569 -NYSP--TSPAYEPRSPGGYTPQSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1622
Score = 74.3 bits (181), Expect = 5e-12
Identities = 53/142 (37%), Positives = 59/142 (41%), Gaps = 40/142 (28%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
P+Y G TP S T SP+Y SP + +SP SPS
Sbjct: 1575 PAYEPRSPGGYTPQSPGYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPTSPSGPTSPS 1632
Query: 400 ---SSPGYSPSSPGYSPTSPGYSPTSPGY------------------------------- 477
+SP YSP+SP YSPTSP YSPTSP Y
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPPHQLVPTSPYTPHISVYSPPTSPTYSPTS 1692
Query: 478 ------SPTSPGYSPTSPTYSP 525
SPTSPGYSPTSPTYSP
Sbjct: 1693 PKGSTYSPTSPGYSPTSPTYSP 1714
[66][TOP]
>UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JYP8_SCHJY
Length = 1748
Score = 167 bits (423), Expect = 4e-40
Identities = 101/204 (49%), Positives = 127/204 (62%), Gaps = 29/204 (14%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR +TG LMRCSFEETV+IL+DAAA E D RGV+ENIMLGQLAP+GTG +++L
Sbjct: 1392 RHGINRAETGALMRCSFEETVEILMDAAASGEKDGCRGVSENIMLGQLAPMGTGSFDVFL 1451
Query: 181 NDEMLKNAI-ELQLPSYMDGLEFGMTPARSPV-SGTPYHEGMMSPN-YLLSPNMRLSPMS 351
+ ++L + + +P+ + GM A P S TPY ++ + Y+ SP+
Sbjct: 1452 DQDLLLSEVPSAGMPTLVG---TGMGKAILPEGSATPYERSPLADSGYMGSPD------- 1501
Query: 352 DAQFSPYV-----------GGMA---------------FSPSSSPGYSPSSPGYSPTSPG 453
DA FSP + G MA FS +SSPG+SPSSP YSP+SP
Sbjct: 1502 DAAFSPLIQTSQDTHDDDYGMMASPYGADARSPGYMSPFSGASSPGFSPSSPSYSPSSPA 1561
Query: 454 YSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1562 YSPTSPSYSPTSPSYSPTSPSYSP 1585
Score = 84.7 bits (208), Expect = 4e-15
Identities = 49/97 (50%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+PA SP S + SP+Y SP + +SP ++SP+S SP Y
Sbjct: 1559 SPAYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTSPSYSPTSPSY 1611
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1612 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1648
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1573 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1624
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1655
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1580 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1631
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1632 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1662
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1587 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1638
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1639 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1669
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1594 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1645
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1646 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1676
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1601 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1652
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1653 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1683
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1608 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1659
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1660 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1690
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1615 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1666
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1667 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1697
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1622 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1673
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1674 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1704
Score = 71.2 bits (173), Expect = 4e-11
Identities = 47/111 (42%), Positives = 57/111 (51%), Gaps = 20/111 (18%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1643 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1694
Query: 433 YSPTSPGYSP--------------------TSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP TSP YSPTSP YSPTSP YSP
Sbjct: 1695 YSPTSPSYSPGHSAQNAQGRMSPRSPVYSPTSPSYSPTSPSYSPTSPRYSP 1745
[67][TOP]
>UniRef100_UPI0000546D90 PREDICTED: im:7136071 isoform 1 n=1 Tax=Danio rerio
RepID=UPI0000546D90
Length = 1972
Score = 166 bits (420), Expect = 9e-40
Identities = 106/248 (42%), Positives = 130/248 (52%), Gaps = 73/248 (29%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTGPLM+CSFEETVD+L++A+++ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1413 RHGINRQDTGPLMKCSFEETVDVLMEASSHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1472
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMT----------------- 255
+ E K +E+ PS M G+ MT
Sbjct: 1473 DAEKCKYGMEIPTNIPGISVAGPTGMFFGSAPSPMSGMSPAMTPWNTGATPAYGAWSPSV 1532
Query: 256 ---------------------------PARSPVSGTPYHEG-----MMSPNYL------L 321
PA SP G+P G + SP Y+ L
Sbjct: 1533 GSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPASPYIPSPGYITLHFGAL 1592
Query: 322 SPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYS 501
SPN SP S A + P G ++P SPGYSP+SP YSPTSP YSPTSP YSPTSP YS
Sbjct: 1593 SPN--YSPTSPA-YEPRSPGGGYTP-QSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYS 1648
Query: 502 PTSPTYSP 525
PTSP+YSP
Sbjct: 1649 PTSPSYSP 1656
Score = 87.8 bits (216), Expect = 4e-16
Identities = 50/94 (53%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPS 423
G TP S T SP+Y SPN + S + SP ++SP+S P YSP+
Sbjct: 1611 GYTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSPTS-PSYSPT 1664
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1665 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1698
Score = 87.4 bits (215), Expect = 5e-16
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SPNY SP + +SP ++SP+S P YSP+S
Sbjct: 1618 GYSPTSPSYSPTSPSYSPTSPNY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1672
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1673 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1705
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1644 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1695
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1696 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1726
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1651 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1702
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1703 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1733
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1658 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1709
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1710 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1740
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1665 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1716
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1717 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1747
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1672 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1723
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1724 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1754
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1686 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1737
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP+YSP
Sbjct: 1738 YSPTSPSYSPTSPSYSPTSPNYTPTSPSYSP 1768
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1693 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1744
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 1745 YSPTSPSYSPTSPNYTPTSPSYSPTSPSYSP 1775
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1700 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1751
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 1752 YSPTSPNYTPTSPSYSPTSPSYSPTSPSYSP 1782
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP Y +P S +SP ++SP+S SP Y
Sbjct: 1798 SPSYSPTSPS---YSPSSPRY--TPQSPTYTPSSPSYSP--SSPSYSPTSPKYTPTSPSY 1850
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1851 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 1887
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/97 (48%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP ++SP+S SP Y
Sbjct: 1714 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTSPNYTPTSPSY 1766
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 1767 SPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 1803
Score = 81.6 bits (200), Expect = 3e-14
Identities = 45/91 (49%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + ++P ++SP+S P YSP+SP
Sbjct: 1728 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPNYTPT--SPSYSPTS-PSYSPTSPS 1779
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 1780 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 1810
Score = 80.9 bits (198), Expect = 5e-14
Identities = 46/92 (50%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + S + SP ++SP+S P YSP+SP
Sbjct: 1735 SPSYSPTSPS---YSPTSPSYSPTSPNYTPTSPSYSPTSP-----SYSPTS-PSYSPTSP 1785
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSP+SP Y+P
Sbjct: 1786 NYTPTSPNYSPTSPSYSPTSPSYSPSSPRYTP 1817
Score = 80.1 bits (196), Expect = 9e-14
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP+ + +++P ++SPSS SP YSP+SP YSPTSP YSPT
Sbjct: 1826 SPSY--SPSSPSYSPTSPKYTPT--SPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1881
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSPT+P YSPTSPTYSP
Sbjct: 1882 SPTYSPTTPKYSPTSPTYSP 1901
Score = 79.3 bits (194), Expect = 1e-13
Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SPNY SP+ + S + SP ++SP+S P Y+P+SP
Sbjct: 1742 SPSYSPTSPS---YSPTSPNYTPTSPSYSPTSPSYSPTSP-----SYSPTS-PNYTPTSP 1792
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+SP Y+P SPTY+P
Sbjct: 1793 NYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTP 1824
Score = 79.0 bits (193), Expect = 2e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 1858 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPT 1905
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1906 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1936
Score = 66.2 bits (160), Expect = 1e-09
Identities = 45/91 (49%), Positives = 53/91 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + ++SP +SP+S P YSP+SP
Sbjct: 1882 SPTYSPT--TPKYSPT-SPTY--SPTSPTYTPTSPKYSPT--SPTYSPTS-PKYSPTSPT 1933
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP S YSPTSPGYSPTSPTYSP
Sbjct: 1934 YSPTSPKGST----YSPTSPGYSPTSPTYSP 1960
[68][TOP]
>UniRef100_UPI00019270E9 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 2 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270E9
Length = 2014
Score = 165 bits (417), Expect = 2e-39
Identities = 102/218 (46%), Positives = 123/218 (56%), Gaps = 43/218 (19%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR + G LMRCSFEETVD+L++AA +AE D LRGV+ENI+LGQL PIGTG L L
Sbjct: 1417 RHGINRQEVGCLMRCSFEETVDVLVEAAFHAEADNLRGVSENIILGQLPPIGTGCFNLML 1476
Query: 181 NDEMLKNAIELQL--------------------------------PSYMDG----LEFGM 252
+ E K +E+ L P Y DG L GM
Sbjct: 1477 DAEKCKEGMEIPLNIGEGGGVFFGSAASPSNAMSPQMTPWNQGHTPGYGDGWSPALGSGM 1536
Query: 253 TPARSPVSGTPYHE-------GMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPG 411
TP + S + + + G SP + ++ + F+P A SP SSPG
Sbjct: 1537 TPGAASFSPSAHSDASGFSPAGGFSPAWSPQDSIPSYSPNSPAFNPQ--SPAMSP-SSPG 1593
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSPGYSPTSP YSPTSPGYSPTSP+YSP
Sbjct: 1594 YSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSP 1631
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/93 (50%), Positives = 56/93 (60%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1607 GYSPTSPSYSPTSPGYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1661
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1662 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694
Score = 84.7 bits (208), Expect = 4e-15
Identities = 47/93 (50%), Positives = 55/93 (59%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1621 GYSPTSPSYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1675
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1676 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSP 1708
Score = 84.3 bits (207), Expect = 5e-15
Identities = 53/104 (50%), Positives = 61/104 (58%)
Frame = +1
Query: 214 QLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFS 393
Q PSY +P+ SP S P + SP Y SP + +SP ++S
Sbjct: 1765 QSPSYSPS-----SPSYSPTS--PKYSPT-SPKY--SPTSPKYSPTSPSYSP--SSPSYS 1812
Query: 394 PSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
PSS P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1813 PSS-PNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSP 1855
Score = 83.6 bits (205), Expect = 8e-15
Identities = 45/74 (60%), Positives = 50/74 (67%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSP 483
SPNY SP + +SP A+SP+S P YSP+SP YSPTSP YSPTSP YSP
Sbjct: 1815 SPNY--SPTSPTYSPTSPTYSPT--SPAYSPTS-PAYSPTSPAYSPTSPVYSPTSPAYSP 1869
Query: 484 TSPGYSPTSPTYSP 525
TSP YSPTSP YSP
Sbjct: 1870 TSPKYSPTSPKYSP 1883
Score = 82.8 bits (203), Expect = 1e-14
Identities = 48/97 (49%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP ++SP+S SP Y
Sbjct: 1661 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTSPIYSPTSPSY 1713
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1714 SPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSP 1750
Score = 82.4 bits (202), Expect = 2e-14
Identities = 48/97 (49%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P S T SP+Y SP+ S +SP +SP+S SP Y
Sbjct: 1784 SPTSPKYSPTSPKYSPTSPSY--SPSSPSYSPSSPNYSPT--SPTYSPTSPTYSPTSPAY 1839
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1840 SPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSP 1876
Score = 82.0 bits (201), Expect = 2e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + + +SP ++SP+S P YSP+SP
Sbjct: 1682 SPSYSPTSPS---YSPTSPSY--SPTSPIYSPTSPSYSPT--SPSYSPTS-PSYSPTSPK 1733
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+SP YSPTSP YSP
Sbjct: 1734 YSPTSPSYSPTSPSYSPSSPQYSPTSPAYSP 1764
Score = 80.5 bits (197), Expect = 7e-14
Identities = 48/97 (49%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP ++SPSS SP Y
Sbjct: 1710 SPSYSPTSPS---YSPTSPSY--SPTSPKYSPTSPSYSPT--SPSYSPSSPQYSPTSPAY 1762
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP SP YSP+SP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1763 SPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSP 1799
Score = 80.5 bits (197), Expect = 7e-14
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S T SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1815 SPNYSPTSPT---YSPTSPTY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PVYSPTSPA 1866
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1867 YSPTSPKYSPTSPKYSPTSPIYSPTSPAYSP 1897
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/94 (50%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVG--GMAFSPSSSPGYSPS 423
+P+ SP S + SP+Y SP+ + S + SP ++SP+S P YSP+
Sbjct: 1668 SPSYSPTSPS---YSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTS-PSYSPT 1723
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP YSPTSP YSP+SP YSP
Sbjct: 1724 SPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSP 1757
Score = 80.1 bits (196), Expect = 9e-14
Identities = 49/97 (50%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P S T SP+Y S + + SP S A +SP ++SPSS SP Y
Sbjct: 1728 SPTSPKYSPTSPSYSPTSPSYSPS-SPQYSPTSPA-YSPQ--SPSYSPSSPSYSPTSPKY 1783
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP YSPTSP YSP+SP YSP+SP YSP
Sbjct: 1784 SPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSP 1820
Score = 79.3 bits (194), Expect = 1e-13
Identities = 47/93 (50%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 TPARSPVSGT--PYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
+P SP S T P + SP + +SP A+SP+S P YSP+S
Sbjct: 1822 SPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPT--SPAYSPTS-PKYSPTS 1878
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTS GYSPTSP YSP
Sbjct: 1879 PKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSP 1911
Score = 77.8 bits (190), Expect = 4e-13
Identities = 51/96 (53%), Positives = 60/96 (62%), Gaps = 5/96 (5%)
Frame = +1
Query: 253 TPARSPVSG----TPYHEGMMSPNYLLSPNM-RLSPMSDAQFSPYVGGMAFSPSSSPGYS 417
+PA SP S T SP Y SP + SP S +SP A+SP+S+ GYS
Sbjct: 1850 SPAYSPTSPVYSPTSPAYSPTSPKY--SPTSPKYSPTSPI-YSPT--SPAYSPTST-GYS 1903
Query: 418 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P+SP YSP+SP YSPT+P YSPTSP YSP SPTYSP
Sbjct: 1904 PTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSP 1939
Score = 77.4 bits (189), Expect = 6e-13
Identities = 47/91 (51%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + + +SP +SP+S P YSP+SP
Sbjct: 1836 SPAYSPTSPA---YSPTSPAY--SPTSPVYSPTSPAYSPT--SPKYSPTS-PKYSPTSPI 1887
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTS GYSPTSP YSP+SP YSP
Sbjct: 1888 YSPTSPAYSPTSTGYSPTSPEYSPSSPKYSP 1918
Score = 72.8 bits (177), Expect = 1e-11
Identities = 45/88 (51%), Positives = 55/88 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S P + SP Y SP + + +SP G +SP+S P YSPSSP
Sbjct: 1864 SPAYSPTS--PKYSPT-SPKY--SPTSPIYSPTSPAYSPTSTG--YSPTS-PEYSPSSPK 1915
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPT 516
YSPT+P YSPTSP YSP SP YSP++PT
Sbjct: 1916 YSPTTPQYSPTSPKYSPASPTYSPSTPT 1943
[69][TOP]
>UniRef100_UPI0000E48672 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48672
Length = 1913
Score = 164 bits (416), Expect = 3e-39
Identities = 104/225 (46%), Positives = 125/225 (55%), Gaps = 50/225 (22%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D G LMRCSFEETVDIL DA A+ ETD L+GV+ENIMLG+LA +GTG +L L
Sbjct: 1416 RHGINRQDVGALMRCSFEETVDILNDAGAHGETDHLKGVSENIMLGKLAGLGTGSFDLLL 1475
Query: 181 NDEMLKNAIELQLPS-----YMDGLEFG--------MTPARSP--VSGTPYHEGMMSP-- 309
+ E K+ +E+ + M G+ FG M+P +P TP H M+P
Sbjct: 1476 DAEKCKHGMEIPMGMGAGLVGMPGMLFGAMGSPSQSMSPQMTPWNQGATPMHGSGMTPGG 1535
Query: 310 -------------NYLLSPNMRLSPMSDAQ--FSPYVGGMA------FSPSS-------- 402
+ SP P S SPY+ A +SP+S
Sbjct: 1536 PGFSPANSESTGFSPAYSPAWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASP 1595
Query: 403 ----SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPGYSP+SP YSPTSPGYSP SP YSPTSP YSPTSP+YSP
Sbjct: 1596 ATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSP 1640
Score = 87.0 bits (214), Expect = 7e-16
Identities = 48/93 (51%), Positives = 57/93 (61%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +PA S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1616 GYSPASPSYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1670
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1671 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1703
Score = 85.1 bits (209), Expect = 3e-15
Identities = 49/106 (46%), Positives = 59/106 (55%), Gaps = 14/106 (13%)
Frame = +1
Query: 250 MTPARSPVS--------GTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS- 402
M+P+ SP S TP G + SP + +SP ++SP+S
Sbjct: 1579 MSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPT--SPSYSPTSP 1636
Query: 403 -----SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1637 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1682
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/93 (50%), Positives = 56/93 (60%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1602 GYSPTSPSYSPTSPGYSPASPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1656
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1657 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1689
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1642 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1693
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1694 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1724
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1649 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1700
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1701 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1731
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1656 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1707
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1708 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1738
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1663 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1714
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1715 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1745
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1670 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1721
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1722 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1752
Score = 83.6 bits (205), Expect = 8e-15
Identities = 53/107 (49%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Frame = +1
Query: 214 QLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMA- 387
Q PSY G +P+ S T SP+Y SPN S + + SP +
Sbjct: 1774 QSPSYSPGSP-SYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSP 1832
Query: 388 -FSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SPSS P YSP+SP YSPTSP YSP SP YSPTSP YSP+SPTYSP
Sbjct: 1833 KYSPSS-PKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSP 1878
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/94 (52%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPG---YSPS 423
+P+ SP S + SP+Y S + + SP S + SPS SPG YSPS
Sbjct: 1733 SPSYSPTSPS---YSPTSPSYSPS-SPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPS 1788
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP YSPTSP +SP+SPTYSP
Sbjct: 1789 SPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSP 1822
Score = 81.6 bits (200), Expect = 3e-14
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1677 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1728
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP YSP
Sbjct: 1729 YSPTSPSYSPTSPSYSPTSPSYSPSSPKYSP 1759
Score = 81.6 bits (200), Expect = 3e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1684 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1735
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+SP YSPTSP+YSP
Sbjct: 1736 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSP 1766
Score = 81.6 bits (200), Expect = 3e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1691 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1742
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+SP YSPTSP YSPTSP+YSP
Sbjct: 1743 YSPTSPSYSPSSPKYSPTSPSYSPTSPSYSP 1773
Score = 80.5 bits (197), Expect = 7e-14
Identities = 42/74 (56%), Positives = 50/74 (67%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSP 483
SP+Y SP +SP G ++SPSS P YSP+SP YSPTSP YSPTSP +SP
Sbjct: 1761 SPSY--SPTSPSYSPQSPSYSP--GSPSYSPSS-PKYSPTSPSYSPTSPSYSPTSPNFSP 1815
Query: 484 TSPGYSPTSPTYSP 525
+SP YSP SP+YSP
Sbjct: 1816 SSPTYSPASPSYSP 1829
Score = 73.9 bits (180), Expect = 6e-12
Identities = 44/83 (53%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP S ++SP +SP+S SP YSP+SP YSP+SP YSPT
Sbjct: 1824 SPSY--SPTSPKYSPSSPKYSPT--SPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPT 1879
Query: 466 SP---GYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP+YSP
Sbjct: 1880 SPKGSTYSPTSPSYSPTSPSYSP 1902
Score = 72.0 bits (175), Expect = 2e-11
Identities = 45/90 (50%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA S T SP Y SP + ++SP +SP+S P YSPSSP
Sbjct: 1821 SPASPSYSPTSPKYSPSSPKY--SPTSPTYSPTSPKYSP--ASPTYSPTS-PKYSPSSPT 1875
Query: 433 YSPTSPG---YSPTSPGYSPTSPGYSPTSP 513
YSPTSP YSPTSP YSPTSP YSPTSP
Sbjct: 1876 YSPTSPKGSTYSPTSPSYSPTSPSYSPTSP 1905
[70][TOP]
>UniRef100_B4E3V7 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4E3V7_HUMAN
Length = 1935
Score = 164 bits (416), Expect = 3e-39
Identities = 108/231 (46%), Positives = 126/231 (54%), Gaps = 56/231 (24%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1381 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 1440
Query: 181 NDEMLKNAIEL------------------QLPSYMDGLEFGMTP----------ARSPVS 276
+ E K +E+ PS M G+ MTP A SP
Sbjct: 1441 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSV 1500
Query: 277 G---TPYHEGM----------MSPNY--LLSPNMRLSPMSDAQFSPYV--GGMAFSPSSS 405
G TP G SP Y SP SP S SPY+ G A SPS S
Sbjct: 1501 GSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPG-SPGSPGPSSPYIPSPGGAMSPSYS 1559
Query: 406 P-----------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P GY+P SP YSPTSP YSPTSP YSPTS YSPTSP+YSP
Sbjct: 1560 PTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSP 1610
Score = 90.9 bits (224), Expect = 5e-17
Identities = 56/126 (44%), Positives = 65/126 (51%), Gaps = 29/126 (23%)
Frame = +1
Query: 235 GLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYV----GGM------ 384
G G +PA SP G+P G SP Y+ SP +SP Y GG
Sbjct: 1521 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPS 1579
Query: 385 -------------AFSPSSS------PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPT 507
++SP+SS P YSP+SP YSPTSP YSPTSP YSPTSP YSPT
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1639
Query: 508 SPTYSP 525
SP+YSP
Sbjct: 1640 SPSYSP 1645
Score = 88.2 bits (217), Expect = 3e-16
Identities = 50/102 (49%), Positives = 59/102 (57%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
P+Y G TP S T SP+Y SP + +SP ++SP+
Sbjct: 1563 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSY--SPTSSNYSPTSPSYSPT--SPSYSPT 1618
Query: 400 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1619 S-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1659
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/91 (51%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S S T SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1595 SPTSSNYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1649
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1680
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1612 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1663
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1619 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1670
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1701
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1626 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1677
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1708
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1633 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1684
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1715
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1647 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1698
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP+YSP
Sbjct: 1699 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 1729
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 1706 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 1736
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + + SP ++SP+S P YSP+SP
Sbjct: 1689 SPSYSPTSPS---YSPTSPSYSPTSPNYSPTSPNYTPTSP-----SYSPTS-PSYSPTSP 1739
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1740 NYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1771
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SPNY SPN + S + SP ++SP+S P Y+P+SP
Sbjct: 1696 SPSYSPTSPS---YSPTSPNYSPTSPNYTPTSPSYSPTSP-----SYSPTS-PNYTPTSP 1746
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP Y+P
Sbjct: 1747 NYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP 1778
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP +SP+S SP Y
Sbjct: 1675 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPTSPNYTPTSPSY 1727
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 1728 SPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 1764
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/97 (48%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
TP P S + SP + SP + ++SP G +SP++ SP Y
Sbjct: 1805 TPTSPPYSPSSPEYTPTSPKF--SPTSPKYSPTSPKYSPT--GPTYSPTTPKYSPTSPTY 1860
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1861 SPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSP 1897
Score = 79.0 bits (193), Expect = 2e-13
Identities = 49/107 (45%), Positives = 57/107 (53%), Gaps = 16/107 (14%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVG--GMAFSPSS------- 402
TP S T SPNY SPN + S + SP ++SPSS
Sbjct: 1721 TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1780
Query: 403 ------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPSSP YSPTSP Y+PTSP YSP+SP Y+PTSP +SP
Sbjct: 1781 PTYTPSSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPTSPKFSP 1827
Score = 76.3 bits (186), Expect = 1e-12
Identities = 44/91 (48%), Positives = 54/91 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP+ SP Q Y SSP YSP+SP
Sbjct: 1752 SPSYSPTSPS---YSPTSPSY--SPS---SPRYTPQSPTYTPSSPSYSPSSPSYSPTSPK 1803
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSP+SP Y+PTSP +SPTSP YSP
Sbjct: 1804 YTPTSPPYSPSSPEYTPTSPKFSPTSPKYSP 1834
Score = 76.3 bits (186), Expect = 1e-12
Identities = 41/74 (55%), Positives = 46/74 (62%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSP 483
SP+Y SP SP PY +SP +SP+SP YSPTSP YSPT P YSP
Sbjct: 1794 SPSY--SPT---SPKYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPTGPTYSP 1848
Query: 484 TSPGYSPTSPTYSP 525
T+P YSPTSPTYSP
Sbjct: 1849 TTPKYSPTSPTYSP 1862
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/94 (50%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP+S P Y+P+SP
Sbjct: 1819 TPTSPKFSPTSPKYSPTSPKY--SPTGPTYSPTTPKYSPT--SPTYSPTS-PVYTPTSPK 1873
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSP---TYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP TYSP
Sbjct: 1874 YSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTYSP 1907
Score = 74.3 bits (181), Expect = 5e-12
Identities = 42/76 (55%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSP---G 474
SP Y SP + + ++SP +SP YSP+SP YSPTSP YSPTSP
Sbjct: 1857 SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPQYSPTSPTYSPTSPKGST 1904
Query: 475 YSPTSPGYSPTSPTYS 522
YSPTSPGYSPTSPTYS
Sbjct: 1905 YSPTSPGYSPTSPTYS 1920
[71][TOP]
>UniRef100_Q30BD9 DNA-directed RNA polymerase n=1 Tax=Glaucocystis nostochinearum
RepID=Q30BD9_9EUKA
Length = 1852
Score = 164 bits (415), Expect = 4e-39
Identities = 103/222 (46%), Positives = 120/222 (54%), Gaps = 47/222 (21%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR TG +MRCSFEETV+IL+DAA YAETD R VTENIMLGQL +GTG +L+L
Sbjct: 1399 RHGINRVPTGAMMRCSFEETVEILMDAAVYAETDHCRSVTENIMLGQLCQLGTGSFDLFL 1458
Query: 181 NDEMLKNAIELQL------------------PSYMDGLEFGMTPA--RSPVSGTPYHEGM 300
ND+ + M + MTPA +SP GTP+ +G
Sbjct: 1459 NDKAFSTPLNRSTGGVDGQPNLVGEGSPTIGSPQMTPYDTHMTPALQQSP-GGTPFLDGA 1517
Query: 301 MSPNYL--------LSPNMRLSPMSDAQFSP------YVGGMAFSPSS------------ 402
Y SP+ SP S +SP Y ++SP+S
Sbjct: 1518 TFSPYAESPFVDGSFSPHRGYSP-SSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSP 1576
Query: 403 -SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPGYS SSP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1577 TSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSP 1618
Score = 88.6 bits (218), Expect = 2e-16
Identities = 52/94 (55%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGT--PYHEGMMSPNYLLSPNM-RLSPMSDAQFSPYVGGMAFSPSSSPGYSPS 423
+PA SP S + P G + SP R SP S + +SP ++SP+S PGYSP+
Sbjct: 1613 SPAYSPTSPSYSPTSPGYSPTSPSYSPTSPRYSPTSPS-YSPT--SPSYSPTS-PGYSPT 1668
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1669 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1702
Score = 86.3 bits (212), Expect = 1e-15
Identities = 50/102 (49%), Positives = 61/102 (59%), Gaps = 11/102 (10%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMA-----FSPSS----- 402
+P+ SP S + SP+Y SP + +SP G + +SP+S
Sbjct: 1592 SPSYSPTSPS---YSPTSPSY--SPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSPRYSP 1646
Query: 403 -SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSP+SP YSPTSPGYSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1647 TSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSP 1688
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/99 (47%), Positives = 56/99 (56%), Gaps = 6/99 (6%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SP 408
G +P S T SP+Y SP + +SP ++SP+S SP
Sbjct: 1629 GYSPTSPSYSPTSPRYSPTSPSY--SPTSPSYSPTSPGYSPT--SPSYSPTSPSYSPTSP 1684
Query: 409 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSP YSPTSP YSPTSP SPTSP+YSP
Sbjct: 1685 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSP 1723
Score = 80.5 bits (197), Expect = 7e-14
Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 TPARSPVSGT--PYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
+P+ SP S + P G + SP + +SP ++SP+S P YSP+S
Sbjct: 1648 SPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1704
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP SPTSP YSPTSP YSPTSP+YSP
Sbjct: 1705 PSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSP 1737
Score = 75.9 bits (185), Expect = 2e-12
Identities = 46/100 (46%), Positives = 60/100 (60%), Gaps = 9/100 (9%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVG--GMAFSPSS------S 405
+P+ SP S + SP+Y SP+ + S + SP ++SPSS S
Sbjct: 1690 SPSYSPTSPS---YSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPSSPSCSPAS 1746
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPSSP YSP+SP YSP+SP YSP+SP YSP+SP Y+P
Sbjct: 1747 PTYSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPQYTP 1786
Score = 74.3 bits (181), Expect = 5e-12
Identities = 45/92 (48%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SP+ S S + SP +SPSS P YSPSSP
Sbjct: 1711 SPSCSPTSPS---YSPTSPSYSPTSPSYSPSSPSCSPASP-----TYSPSS-PSYSPSSP 1761
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSP+SP YSP+SP Y+P S YSP
Sbjct: 1762 SYSPSSPSYSPSSPSYSPSSPQYTPASANYSP 1793
Score = 69.7 bits (169), Expect = 1e-10
Identities = 41/90 (45%), Positives = 54/90 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP+ + +SP ++SPSS P YSPSSP
Sbjct: 1718 SPSYSPTSPS---YSPTSPSY--SPSSPSCSPASPTYSP--SSPSYSPSS-PSYSPSSPS 1769
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
YSP+SP YSP+SP Y+P S YSP SP +S
Sbjct: 1770 YSPSSPSYSPSSPQYTPASANYSPPSPLHS 1799
Score = 67.0 bits (162), Expect = 8e-10
Identities = 44/100 (44%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP ++SP+S P SP+S
Sbjct: 1664 GYSPTSPSYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSCSPTS 1718
Query: 427 PGYSPTSPGYSPTSPGYSPTSP-------GYSPTSPTYSP 525
P YSPTSP YSPTSP YSP+SP YSP+SP+YSP
Sbjct: 1719 PSYSPTSPSYSPTSPSYSPSSPSCSPASPTYSPSSPSYSP 1758
[72][TOP]
>UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E6J4_LODEL
Length = 1745
Score = 164 bits (414), Expect = 5e-39
Identities = 96/210 (45%), Positives = 123/210 (58%), Gaps = 35/210 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR+DTG LMRCSFEETV+ILLDAAA AE D +G++EN+MLGQ+AP+GTG ++ +
Sbjct: 1382 RHGINRSDTGALMRCSFEETVEILLDAAASAELDDCKGISENVMLGQMAPLGTGSFDVMV 1441
Query: 181 NDEMLKNA--------------------IELQLPSYMDGLEFGMTPARSPVS-------- 276
+D+ML+ A +E++ + G +P + +S
Sbjct: 1442 DDKMLQQAPTNVAMVEVADDGGATPYRDLEMEDEQIVVDEGAGFSPVHNAMSDNMNGGLT 1501
Query: 277 ---GTPYHEGMMSP-NYLLSPNMRLSPMSDAQFSPYVGGMAFSPS---SSPGYSPSSPGY 435
G P G SP +Y +P + SP G SPS +SP YSP+SP Y
Sbjct: 1502 SYGGQPTSPGNTSPFSYGTTPGYGGTSPGYGGTSPGYGYSPTSPSYSPTSPSYSPTSPSY 1561
Query: 436 SPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1562 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1591
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1565 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1616
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1617 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1647
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1572 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1623
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1624 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1654
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1579 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1630
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1631 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1661
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1586 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1637
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1638 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1668
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1593 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1644
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1645 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1675
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1600 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1651
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1652 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1682
Score = 83.2 bits (204), Expect = 1e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1607 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1658
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1659 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSP 1689
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1614 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1665
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1666 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSP 1696
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1621 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1672
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1673 YSPTSPSYSPTSPQYSPTSPQYSPTSPSYSP 1703
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1628 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1679
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1680 YSPTSPQYSPTSPQYSPTSPSYSPTSPSYSP 1710
Score = 81.6 bits (200), Expect = 3e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1635 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPQ 1686
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1687 YSPTSPQYSPTSPSYSPTSPSYSPTSPQYSP 1717
Score = 80.9 bits (198), Expect = 5e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1642 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PQYSPTSPQ 1693
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1694 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSP 1724
Score = 76.6 bits (187), Expect = 1e-12
Identities = 45/91 (49%), Positives = 54/91 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1656 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPQYSPT--SPQYSPTS-PSYSPTSPS 1707
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP SP YSP SP Y P
Sbjct: 1708 YSPTSPQYSPTSPQYSPRSPNYSPKSPEYKP 1738
Score = 68.2 bits (165), Expect = 3e-10
Identities = 41/88 (46%), Positives = 52/88 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + Q+SP ++SP+S P YSP+SP
Sbjct: 1663 SPSYSPTSPS---YSPTSPSY--SPTSPQYSPTSPQYSPT--SPSYSPTS-PSYSPTSPQ 1714
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPT 516
YSPTSP YSP SP YSP SP Y P SP+
Sbjct: 1715 YSPTSPQYSPRSPNYSPKSPEYKPKSPS 1742
[73][TOP]
>UniRef100_C5DXL0 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DXL0_ZYGRC
Length = 1744
Score = 163 bits (413), Expect = 6e-39
Identities = 91/197 (46%), Positives = 121/197 (61%), Gaps = 22/197 (11%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG NR++TG LMRCSFEETV+IL +A A AE D RGV+EN++LGQ+APIGTG ++ +
Sbjct: 1386 RHGFNRSNTGALMRCSFEETVEILFEAGASAELDDCRGVSENVILGQMAPIGTGAFDVMI 1445
Query: 181 NDE-MLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA 357
++E ++K E ++ +DG + G TP + G+++ + + SP+ D+
Sbjct: 1446 DEESLVKYMPEQKITELVDGQDGGATPYSN-------ENGLINTEVDVKDELMFSPLVDS 1498
Query: 358 --------QFSPYVGGMA-------------FSPSSSPGYSPSSPGYSPTSPGYSPTSPG 474
F+ Y GG A F SSPG+SPSSP YSPTSP YSPTSP
Sbjct: 1499 GSTDAMAGGFTAYGGGSASFGSYGDAPISPGFGGVSSPGFSPSSPTYSPTSPSYSPTSPS 1558
Query: 475 YSPTSPGYSPTSPTYSP 525
YSP SP YSPTSP+YSP
Sbjct: 1559 YSPPSPNYSPTSPSYSP 1575
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/92 (53%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + S + SP ++SP+S P YSP+SP
Sbjct: 1647 SPSYSPTSPS---YSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSPTS-PSYSPTSP 1697
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP SPTYSP
Sbjct: 1698 SYSPTSPSYSPTSPSYSPTSPNYSPGSPTYSP 1729
Score = 84.0 bits (206), Expect = 6e-15
Identities = 50/100 (50%), Positives = 61/100 (61%), Gaps = 9/100 (9%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVG--GMAFSPSS------S 405
+P+ SP S + SPNY SP+ + S + SP ++SP+S S
Sbjct: 1549 SPSYSPTSPS---YSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1605
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1606 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1645
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1570 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1621
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1652
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1577 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1628
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1659
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1584 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1635
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1666
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1598 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1649
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1680
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1605 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1656
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1657 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1687
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1612 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1663
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1664 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1694
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1619 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPN 1670
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1701
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1626 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PNYSPTSPS 1677
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1708
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1640 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPNYSPT--SPSYSPTS-PSYSPTSPS 1691
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 1722
Score = 73.6 bits (179), Expect = 8e-12
Identities = 43/87 (49%), Positives = 53/87 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SPNY SP + +SP ++SP+S P YSP+SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPNY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSP 513
YSPTSP YSPTSP YSP SP YSP+SP
Sbjct: 1706 YSPTSPSYSPTSPNYSPGSPTYSPSSP 1732
[74][TOP]
>UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WN64_CANDC
Length = 1735
Score = 163 bits (412), Expect = 8e-39
Identities = 94/203 (46%), Positives = 117/203 (57%), Gaps = 28/203 (13%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR+DTG LMRCSFEETV+ILLDAAA AE D +G++EN+MLGQ+AP+GTG +L +
Sbjct: 1388 RHGINRSDTGALMRCSFEETVEILLDAAAAAELDDCKGISENVMLGQMAPLGTGSFDLMI 1447
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPY--HEGMMSPNYLLSPNMRLSPMSD 354
++ ML+ Q PS M TPY +E N + SP+
Sbjct: 1448 DERMLQ-----QAPS-----SIAMETIADDGGATPYKEYESARDENIEIDAGAGFSPIHT 1497
Query: 355 AQFSPYV-------GGMAFSPSSSP-------------------GYSPSSPGYSPTSPGY 456
AQ + + GG SP+++ GYSP+SP YSPTSP Y
Sbjct: 1498 AQVNEGIVGGLTSYGGQPTSPAATSPFSFGYNTATSPGYASPGYGYSPTSPSYSPTSPSY 1557
Query: 457 SPTSPGYSPTSPGYSPTSPTYSP 525
SPTSP YSPTSP YSPTSP+YSP
Sbjct: 1558 SPTSPSYSPTSPSYSPTSPSYSP 1580
Score = 86.3 bits (212), Expect = 1e-15
Identities = 48/91 (52%), Positives = 59/91 (64%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1568 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1619
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSPGYSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1620 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSP 1650
Score = 86.3 bits (212), Expect = 1e-15
Identities = 48/91 (52%), Positives = 59/91 (64%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SPG
Sbjct: 1575 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPG 1626
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1657
Score = 85.5 bits (210), Expect = 2e-15
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S PGYSP+SP
Sbjct: 1582 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PGYSPTSPS 1633
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSP 1664
Score = 84.3 bits (207), Expect = 5e-15
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP G +SP+S P YSP+SP
Sbjct: 1589 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPG--YSPTS-PSYSPTSPS 1640
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPQYSPTSPSYSP 1671
Score = 84.3 bits (207), Expect = 5e-15
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + Q+SP ++SP+S P YSP+S
Sbjct: 1626 GYSPTSPSYSPTSPSYSPTSPSY--SPTSPSYSPTSPQYSPT--SPSYSPTS-PQYSPTS 1680
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1681 PSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSP 1713
Score = 81.6 bits (200), Expect = 3e-14
Identities = 46/93 (49%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 TPARSPVSGT--PYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
+P+ SP S + P G + SP + +SP ++SP+S P YSP+S
Sbjct: 1610 SPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPT--SPSYSPTS-PQYSPTS 1666
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1667 PSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSP 1699
Score = 77.0 bits (188), Expect = 7e-13
Identities = 46/91 (50%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP Y SP + Q+SP ++SP+S P YSP+SP
Sbjct: 1645 SPSYSPTSPS---YSPTSPQY--SPTSPSYSPTSPQYSPT--SPSYSPTS-PQYSPTSPS 1696
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP SP Y P
Sbjct: 1697 YSPTSPQYSPTSPQYSPTSPRYSPGSPGYEP 1727
Score = 58.2 bits (139), Expect = 4e-07
Identities = 36/80 (45%), Positives = 43/80 (53%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T SP Y SP + Q+SP ++SP+S P YSP+SP
Sbjct: 1656 SPTSPQYSPTSPSYSPTSPQY--SPTSPSYSPTSPQYSPT--SPSYSPTS-PQYSPTSPQ 1710
Query: 433 YSPTSPGYSPTSPGYSPTSP 492
YSPTSP YSP SPGY P SP
Sbjct: 1711 YSPTSPRYSPGSPGYEPKSP 1730
[75][TOP]
>UniRef100_UPI00019270BB PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 1 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270BB
Length = 2041
Score = 162 bits (411), Expect = 1e-38
Identities = 103/241 (42%), Positives = 123/241 (51%), Gaps = 66/241 (27%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR + G LMRCSFEETVD+L++AA +AE D LRGV+ENI+LGQL PIGTG L L
Sbjct: 1418 RHGINRQEVGCLMRCSFEETVDVLVEAAFHAEADNLRGVSENIILGQLPPIGTGCFNLML 1477
Query: 181 NDEMLKNAIELQL--------------------------------------PSYMDG--- 237
+ E K +E+ L P Y DG
Sbjct: 1478 DAEKCKEGMEIPLNIGEGHGMMPGGGVFFGSAASPSNAMSPQMTPWNQGHTPGYGDGWSP 1537
Query: 238 -LEFGMTPARSPVSGTPYHE-------GMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFS 393
L GMTP + S + + + G SP + +M L + + P S
Sbjct: 1538 ALGSGMTPGAASFSPSAHSDASGFSPAGGFSPAWSPQDSMSLGSPDSSPYIPSPSRNVMS 1597
Query: 394 PS-----------------SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
PS SSPGYSP+SP YSPTSPGYSPTSP YSPTSPGYSPTSP+YS
Sbjct: 1598 PSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYS 1657
Query: 523 P 525
P
Sbjct: 1658 P 1658
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/93 (50%), Positives = 56/93 (60%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1634 GYSPTSPSYSPTSPGYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1688
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1689 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1721
Score = 84.7 bits (208), Expect = 4e-15
Identities = 47/93 (50%), Positives = 55/93 (59%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1648 GYSPTSPSYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1702
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1703 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSP 1735
Score = 84.3 bits (207), Expect = 5e-15
Identities = 53/104 (50%), Positives = 61/104 (58%)
Frame = +1
Query: 214 QLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFS 393
Q PSY +P+ SP S P + SP Y SP + +SP ++S
Sbjct: 1792 QSPSYSPS-----SPSYSPTS--PKYSPT-SPKY--SPTSPKYSPTSPSYSP--SSPSYS 1839
Query: 394 PSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
PSS P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1840 PSS-PNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSP 1882
Score = 83.6 bits (205), Expect = 8e-15
Identities = 45/74 (60%), Positives = 50/74 (67%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSP 483
SPNY SP + +SP A+SP+S P YSP+SP YSPTSP YSPTSP YSP
Sbjct: 1842 SPNY--SPTSPTYSPTSPTYSPT--SPAYSPTS-PAYSPTSPAYSPTSPVYSPTSPAYSP 1896
Query: 484 TSPGYSPTSPTYSP 525
TSP YSPTSP YSP
Sbjct: 1897 TSPKYSPTSPKYSP 1910
Score = 83.2 bits (204), Expect = 1e-14
Identities = 47/91 (51%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S + SP Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1632 SPGYSPTSPS---YSPTSPGY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1683
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1714
Score = 82.8 bits (203), Expect = 1e-14
Identities = 48/97 (49%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP ++SP+S SP Y
Sbjct: 1688 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTSPIYSPTSPSY 1740
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1741 SPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSP 1777
Score = 82.4 bits (202), Expect = 2e-14
Identities = 48/97 (49%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P S T SP+Y SP+ S +SP +SP+S SP Y
Sbjct: 1811 SPTSPKYSPTSPKYSPTSPSY--SPSSPSYSPSSPNYSPT--SPTYSPTSPTYSPTSPAY 1866
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1867 SPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSP 1903
Score = 82.0 bits (201), Expect = 2e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + + +SP ++SP+S P YSP+SP
Sbjct: 1709 SPSYSPTSPS---YSPTSPSY--SPTSPIYSPTSPSYSPT--SPSYSPTS-PSYSPTSPK 1760
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+SP YSPTSP YSP
Sbjct: 1761 YSPTSPSYSPTSPSYSPSSPQYSPTSPAYSP 1791
Score = 80.5 bits (197), Expect = 7e-14
Identities = 48/97 (49%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP ++SPSS SP Y
Sbjct: 1737 SPSYSPTSPS---YSPTSPSY--SPTSPKYSPTSPSYSPT--SPSYSPSSPQYSPTSPAY 1789
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP SP YSP+SP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1790 SPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSP 1826
Score = 80.5 bits (197), Expect = 7e-14
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S T SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1842 SPNYSPTSPT---YSPTSPTY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PVYSPTSPA 1893
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1894 YSPTSPKYSPTSPKYSPTSPIYSPTSPAYSP 1924
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/94 (50%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVG--GMAFSPSSSPGYSPS 423
+P+ SP S + SP+Y SP+ + S + SP ++SP+S P YSP+
Sbjct: 1695 SPSYSPTSPS---YSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTS-PSYSPT 1750
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP YSPTSP YSP+SP YSP
Sbjct: 1751 SPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSP 1784
Score = 80.1 bits (196), Expect = 9e-14
Identities = 49/97 (50%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P S T SP+Y S + + SP S A +SP ++SPSS SP Y
Sbjct: 1755 SPTSPKYSPTSPSYSPTSPSYSPS-SPQYSPTSPA-YSPQ--SPSYSPSSPSYSPTSPKY 1810
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP YSPTSP YSP+SP YSP+SP YSP
Sbjct: 1811 SPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSP 1847
Score = 79.3 bits (194), Expect = 1e-13
Identities = 47/93 (50%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 TPARSPVSGT--PYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
+P SP S T P + SP + +SP A+SP+S P YSP+S
Sbjct: 1849 SPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPT--SPAYSPTS-PKYSPTS 1905
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTS GYSPTSP YSP
Sbjct: 1906 PKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSP 1938
Score = 77.8 bits (190), Expect = 4e-13
Identities = 51/96 (53%), Positives = 60/96 (62%), Gaps = 5/96 (5%)
Frame = +1
Query: 253 TPARSPVSG----TPYHEGMMSPNYLLSPNM-RLSPMSDAQFSPYVGGMAFSPSSSPGYS 417
+PA SP S T SP Y SP + SP S +SP A+SP+S+ GYS
Sbjct: 1877 SPAYSPTSPVYSPTSPAYSPTSPKY--SPTSPKYSPTSPI-YSPT--SPAYSPTST-GYS 1930
Query: 418 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P+SP YSP+SP YSPT+P YSPTSP YSP SPTYSP
Sbjct: 1931 PTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSP 1966
Score = 77.4 bits (189), Expect = 6e-13
Identities = 47/91 (51%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + + +SP +SP+S P YSP+SP
Sbjct: 1863 SPAYSPTSPA---YSPTSPAY--SPTSPVYSPTSPAYSPT--SPKYSPTS-PKYSPTSPI 1914
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTS GYSPTSP YSP+SP YSP
Sbjct: 1915 YSPTSPAYSPTSTGYSPTSPEYSPSSPKYSP 1945
Score = 72.8 bits (177), Expect = 1e-11
Identities = 45/88 (51%), Positives = 55/88 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S P + SP Y SP + + +SP G +SP+S P YSPSSP
Sbjct: 1891 SPAYSPTS--PKYSPT-SPKY--SPTSPIYSPTSPAYSPTSTG--YSPTS-PEYSPSSPK 1942
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPT 516
YSPT+P YSPTSP YSP SP YSP++PT
Sbjct: 1943 YSPTTPQYSPTSPKYSPASPTYSPSTPT 1970
[76][TOP]
>UniRef100_UPI0000F24379 DNA-directed RNA polymerase II largest subunit (RNA polymerase II
subunit 1) (B220) n=1 Tax=Pichia stipitis CBS 6054
RepID=UPI0000F24379
Length = 1739
Score = 162 bits (411), Expect = 1e-38
Identities = 94/199 (47%), Positives = 115/199 (57%), Gaps = 24/199 (12%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR+DTG LMRCSFEETV+ILL+A A AE D RG++EN+MLGQ+AP+GTG ++ L
Sbjct: 1388 RHGINRSDTGALMRCSFEETVEILLEAGASAELDDCRGISENVMLGQMAPLGTGAFDVML 1447
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDA 357
+D+ML+ A PS + + G TPY E M + + SP+ A
Sbjct: 1448 DDKMLQTA-----PSNV-AVAAGNDEFADDGGATPYREYDMEDDKIQFEEGAGFSPIHTA 1501
Query: 358 QFSPYVGGM-----------------------AFSPSSSPGYSPSSPGYSPTSPGYSPTS 468
Q GG+ +F S SPGY +SP YSPTSP YSPTS
Sbjct: 1502 QVQDVSGGLTSYGGQPTSPSATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTS 1561
Query: 469 PGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSP
Sbjct: 1562 PSYSPTSPSYSPTSPAYSP 1580
Score = 85.1 bits (209), Expect = 3e-15
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1575 SPAYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1626
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1657
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1589 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1640
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1671
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1596 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1647
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1648 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1678
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1603 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1654
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1685
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1568 SPSYSPTSPA---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1619
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1650
Score = 83.2 bits (204), Expect = 1e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1610 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1661
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSP 1692
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1617 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1668
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSP 1699
Score = 81.6 bits (200), Expect = 3e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1624 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1675
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1676 YSPTSPSYSPTSPQYSPTSPQYSPTSPLYSP 1706
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1631 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1682
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1683 YSPTSPQYSPTSPQYSPTSPLYSPTSPQYSP 1713
Score = 79.3 bits (194), Expect = 1e-13
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1638 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPQ 1689
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1690 YSPTSPQYSPTSPLYSPTSPQYSPTSPQYSP 1720
Score = 75.9 bits (185), Expect = 2e-12
Identities = 46/91 (50%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1645 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PQYSPTSPQ 1696
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP SP YSP
Sbjct: 1697 YSPTSPLYSPTSPQYSPTSPQYSPGSPEYSP 1727
Score = 56.2 bits (134), Expect = 1e-06
Identities = 37/80 (46%), Positives = 46/80 (57%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1659 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPQYSPT--SPQYSPTS-PLYSPTSPQ 1710
Query: 433 YSPTSPGYSPTSPGYSPTSP 492
YSPTSP YSP SP YSP SP
Sbjct: 1711 YSPTSPQYSPGSPEYSPNSP 1730
[77][TOP]
>UniRef100_B0XAQ9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0XAQ9_CULQU
Length = 1874
Score = 162 bits (411), Expect = 1e-38
Identities = 107/219 (48%), Positives = 126/219 (57%), Gaps = 44/219 (20%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L DAAA+AE D +RGV+ENI++GQL +GTG +L L
Sbjct: 1392 RHGINRQDTGALMRCSFEETVDVLNDAAAHAEVDPMRGVSENIIMGQLPRMGTGCFDLLL 1451
Query: 181 NDEMLKNAIELQLPSYM--DGLEF--GMTPARSPVSGTPYHE------GMMSPNYLLS-- 324
+ E K +E+ S M G+ F G TP+ SP TP+ + G SP+ S
Sbjct: 1452 DAEKCKLGMEIPHTSIMGSSGMFFGPGATPSMSPAM-TPWQQSQTPGYGEWSPSGPPSGM 1510
Query: 325 ----PNMRLSPMSDA-----QFSPYVGG-----------MAFSPSSSPGYSPS------- 423
P+ S SDA +SP G SPS+SP YSPS
Sbjct: 1511 TPGGPSFSPSAQSDASGMSPSWSPMPGSPSSPGPSMSPYFPSSPSASPSYSPSSPNYAAA 1570
Query: 424 -----SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPGYSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1571 SPGGASPGYSPTSPSYSPTSPNYSPTSPRYSPTSPNYSP 1609
Score = 84.3 bits (207), Expect = 5e-15
Identities = 45/74 (60%), Positives = 53/74 (71%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSP 483
SP+Y SP SP S + +SP A+SP+S P YSPSSP YSPTSP YSPTSP YSP
Sbjct: 1645 SPSY--SPTSPYSPTSPS-YSPT--SPAYSPTS-PSYSPSSPSYSPTSPSYSPTSPSYSP 1698
Query: 484 TSPGYSPTSPTYSP 525
TSP Y+P +P+YSP
Sbjct: 1699 TSPNYTPATPSYSP 1712
Score = 84.0 bits (206), Expect = 6e-15
Identities = 50/106 (47%), Positives = 60/106 (56%), Gaps = 15/106 (14%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNY-----LLSPNMRLSPMSDAQFSP----YVGGMAFSPSS- 402
+P S T + SP+Y L SP +P S A +SP Y +SP+S
Sbjct: 1601 SPTSPNYSPTSPNYSPTSPSYSPTSPLYSPTATYAPSSPA-YSPTSPSYSPTSPYSPTSP 1659
Query: 403 -----SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP Y+P
Sbjct: 1660 SYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTP 1705
Score = 79.3 bits (194), Expect = 1e-13
Identities = 49/109 (44%), Positives = 63/109 (57%), Gaps = 7/109 (6%)
Frame = +1
Query: 220 PSYMDGLEFGMT-PARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSP 396
PSY + T P+ SP S SP+Y SP+ + +SP ++SP
Sbjct: 1646 PSYSPTSPYSPTSPSYSPTSPA---YSPTSPSY--SPSSPSYSPTSPSYSPT--SPSYSP 1698
Query: 397 SS------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S +P YSP+SP YSP+SP YSPTSP YSP+SP YSPTSP+YSP
Sbjct: 1699 TSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSPSYSP 1747
Score = 77.8 bits (190), Expect = 4e-13
Identities = 46/91 (50%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSP-YVGGMAFSPSSSPGYSPSS 426
+PA SP S + SP+Y SP+ + S + SP Y +SP YSPSS
Sbjct: 1665 SPAYSPTSPS---YSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSS 1721
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY 519
P YSPTSP YSP+SP YSPTSP YSPTSP+Y
Sbjct: 1722 PHYSPTSPSYSPSSPKYSPTSPSYSPTSPSY 1752
Score = 73.2 bits (178), Expect = 1e-11
Identities = 47/105 (44%), Positives = 58/105 (55%), Gaps = 14/105 (13%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS-----SPGYS 417
TPA S T + SP+Y SP S ++SP ++SP+S SP Y+
Sbjct: 1704 TPATPSYSPTSPNYSPSSPHY--SPTSPSYSPSSPKYSPT--SPSYSPTSPSYGGSPQYT 1759
Query: 418 PSSPGYSPTSPGYSPTSPGYSPTSPGYSP---------TSPTYSP 525
P+SP YSPTSP YSPTSP YSP+SP +SP SPTYSP
Sbjct: 1760 PASPQYSPTSPKYSPTSPSYSPSSPQHSPGSSGSNFMVNSPTYSP 1804
Score = 71.6 bits (174), Expect = 3e-11
Identities = 44/94 (46%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S P H S + + + SP + A++SP + ++SP S YSP+SP
Sbjct: 1776 SPSYSPSS--PQHSPGSSGSNFMVNSPTYSPTT-ARYSPNMS--SYSPGSQK-YSPTSPV 1829
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPT---SPTYSP 525
Y+PTSP YSP+SP YSPT GYSP+ SPTYSP
Sbjct: 1830 YTPTSPHYSPSSPAYSPTGQGYSPSSPASPTYSP 1863
[78][TOP]
>UniRef100_A3GID7 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3GID7_PICST
Length = 1739
Score = 162 bits (411), Expect = 1e-38
Identities = 94/199 (47%), Positives = 115/199 (57%), Gaps = 24/199 (12%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR+DTG LMRCSFEETV+ILL+A A AE D RG++EN+MLGQ+AP+GTG ++ L
Sbjct: 1388 RHGINRSDTGALMRCSFEETVEILLEAGASAELDDCRGISENVMLGQMAPLGTGAFDVML 1447
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDA 357
+D+ML+ A PS + + G TPY E M + + SP+ A
Sbjct: 1448 DDKMLQTA-----PSNV-AVAAGNDEFADDGGATPYREYDMEDDKIQFEEGAGFSPIHTA 1501
Query: 358 QFSPYVGGM-----------------------AFSPSSSPGYSPSSPGYSPTSPGYSPTS 468
Q GG+ +F S SPGY +SP YSPTSP YSPTS
Sbjct: 1502 QVQDVSGGLTSYGGQPTSPSATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTS 1561
Query: 469 PGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSP
Sbjct: 1562 PSYSPTSPSYSPTSPAYSP 1580
Score = 85.1 bits (209), Expect = 3e-15
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1575 SPAYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1626
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1657
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1589 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1640
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1671
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1596 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1647
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1648 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1678
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1603 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1654
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1685
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1568 SPSYSPTSPA---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1619
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1650
Score = 83.2 bits (204), Expect = 1e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1610 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1661
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSP 1692
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1617 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1668
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSP 1699
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1624 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1675
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1676 YSPTSPSYSPTSPQYSPTSPQYSPTSPSYSP 1706
Score = 81.6 bits (200), Expect = 3e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1631 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1682
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1683 YSPTSPQYSPTSPQYSPTSPSYSPTSPQYSP 1713
Score = 80.9 bits (198), Expect = 5e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1638 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPQ 1689
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1690 YSPTSPQYSPTSPSYSPTSPQYSPTSPQYSP 1720
Score = 77.4 bits (189), Expect = 6e-13
Identities = 46/91 (50%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1645 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PQYSPTSPQ 1696
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP SP YSP
Sbjct: 1697 YSPTSPSYSPTSPQYSPTSPQYSPGSPEYSP 1727
Score = 57.8 bits (138), Expect = 5e-07
Identities = 37/80 (46%), Positives = 46/80 (57%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1659 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPQYSPT--SPQYSPTS-PSYSPTSPQ 1710
Query: 433 YSPTSPGYSPTSPGYSPTSP 492
YSPTSP YSP SP YSP SP
Sbjct: 1711 YSPTSPQYSPGSPEYSPNSP 1730
[79][TOP]
>UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1
Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO
Length = 1752
Score = 162 bits (411), Expect = 1e-38
Identities = 98/227 (43%), Positives = 128/227 (56%), Gaps = 52/227 (22%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR +TG LMRCSFEETV+IL+DAAA E D +G++ENIMLGQLAP+GTG ++YL
Sbjct: 1392 RHGINRAETGALMRCSFEETVEILMDAAASGEKDDCKGISENIMLGQLAPMGTGAFDIYL 1451
Query: 181 NDEMLKN-AIELQLPSYMDGLEFGMTPARSPV-SGTPY---------------------- 288
+ +ML N ++ +P+ GM ++ P +GTPY
Sbjct: 1452 DQDMLMNYSLGTAVPTLAGS---GMGTSQLPEGAGTPYERSPMVDSGFVGSPDAAAFSPL 1508
Query: 289 ----------------------HEGMMSPNYLLSPNMRLSP---MSDAQFSPYVGGMAFS 393
++G+ SP Y + +SP ++ +SP G + S
Sbjct: 1509 VQGGSEGREGFGDYGLLGAASPYKGVQSPGYTSPFSSAMSPGYGLTSPSYSPSSPGYSTS 1568
Query: 394 PS---SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P+ SSP YSP+SP YSPTSP YSPTSP YSPTSP YS TSP+YSP
Sbjct: 1569 PAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSP 1615
Score = 85.1 bits (209), Expect = 3e-15
Identities = 50/103 (48%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+YM +P S T SP+Y SP+ + S + SP ++SP
Sbjct: 1569 PAYMPSSP-SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSP-----SYSP 1622
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1623 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1664
Score = 84.3 bits (207), Expect = 5e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1596 SPSYSPTSPS---YSATSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1647
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1648 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1678
Score = 84.3 bits (207), Expect = 5e-15
Identities = 46/91 (50%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1600 SPTSPSYSATSPSYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1654
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1685
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1610 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1661
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1692
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1617 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1668
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1699
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1624 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1675
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1676 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1706
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1631 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1682
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1683 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1713
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1638 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1689
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1690 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1720
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1645 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1696
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1697 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1727
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1652 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1703
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1704 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1734
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1659 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1710
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1711 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1741
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1666 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1717
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1718 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1748
Score = 77.0 bits (188), Expect = 7e-13
Identities = 44/88 (50%), Positives = 55/88 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1673 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1724
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPT 516
YSPTSP YSPTSP YSPTSP YSPTSP+
Sbjct: 1725 YSPTSPSYSPTSPSYSPTSPSYSPTSPS 1752
[80][TOP]
>UniRef100_Q6CL79 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CL79_KLULA
Length = 1720
Score = 162 bits (410), Expect = 1e-38
Identities = 99/196 (50%), Positives = 119/196 (60%), Gaps = 21/196 (10%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG NR DTG LMRCSFEETV+IL +A A AE D RGV+EN++LGQ+APIGTG ++ +
Sbjct: 1387 RHGFNRADTGALMRCSFEETVEILFEAGAAAELDDCRGVSENVILGQMAPIGTGAFDVMI 1446
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA- 357
+DE L + +G E G TP S SG E + + SP + S +DA
Sbjct: 1447 DDESLVKYMPEHKEVKTEGQEGGATP-YSNESGLANAEINVKDELMFSPLVE-SGGADAL 1504
Query: 358 --QFSPYVG---GMAFSP---------------SSSPGYSPSSPGYSPTSPGYSPTSPGY 477
F+ Y G G A SP SSPG+SP+SPGYSPTSP YSPTSP Y
Sbjct: 1505 AGGFTAYGGADYGSATSPFSGYGNGPTSPGFGEVSSPGFSPTSPGYSPTSPSYSPTSPSY 1564
Query: 478 SPTSPGYSPTSPTYSP 525
SPTSP YSPTSP+YSP
Sbjct: 1565 SPTSPSYSPTSPSYSP 1580
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1568 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1619
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1650
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1575 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1626
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1657
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1582 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1633
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1664
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1589 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1640
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1671
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1596 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1647
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1648 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1678
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1603 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1654
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1685
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1610 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1661
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1692
Score = 83.2 bits (204), Expect = 1e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1617 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1668
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSP 1699
Score = 72.4 bits (176), Expect = 2e-11
Identities = 45/91 (49%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1624 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1675
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP S YSP
Sbjct: 1676 YSPTSPSYSPTSPSYSPTSPQYSPGS--YSP 1704
[81][TOP]
>UniRef100_UPI00003BD271 hypothetical protein DEHA0A14036g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BD271
Length = 1749
Score = 162 bits (409), Expect = 2e-38
Identities = 99/205 (48%), Positives = 122/205 (59%), Gaps = 30/205 (14%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILL+A + AE D RG++EN+MLGQ+AP+GTG ++ +
Sbjct: 1393 RHGINRADTGALMRCSFEETVEILLEAGSAAELDDCRGISENVMLGQMAPLGTGAFDVMV 1452
Query: 181 NDEMLKNAIELQLPSYMDGLEF-------GMTPAR-----------------SPVSGTPY 288
+D+ML+ A + G E G TP R SP+ P
Sbjct: 1453 DDKMLQTAPSNIAVTTAAGNETGEYADDGGATPYRDYEMQDDKIQFEEGAGFSPIHTAPV 1512
Query: 289 HEG---MMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSP---SSSPGYSPSSPGYSPTSP 450
+G + S SP+ SP S SP GG+ SP +SP YSP+SP YSPTSP
Sbjct: 1513 SDGSGALTSYGGATSPS-PTSPFSYGATSPSFGGVT-SPGYGGTSPTYSPTSPSYSPTSP 1570
Query: 451 GYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1571 SYSPTSPSYSPTSPSYSPTSPSYSP 1595
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1576 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1627
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1658
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1583 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1634
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1665
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1590 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1641
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1672
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1597 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1648
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1679
Score = 83.2 bits (204), Expect = 1e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1604 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1655
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSP 1686
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1611 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1662
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSP 1693
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1618 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1669
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1670 YSPTSPSYSPTSPQYSPTSPQYSPTSPSYSP 1700
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1625 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1676
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1677 YSPTSPQYSPTSPQYSPTSPSYSPTSPSYSP 1707
Score = 81.6 bits (200), Expect = 3e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1632 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPQ 1683
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1684 YSPTSPQYSPTSPSYSPTSPSYSPTSPQYSP 1714
Score = 80.9 bits (198), Expect = 5e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1639 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PQYSPTSPQ 1690
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSP 1721
Score = 79.3 bits (194), Expect = 1e-13
Identities = 47/91 (51%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1653 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPQYSPT--SPQYSPTS-PSYSPTSPS 1704
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP SP YSP
Sbjct: 1705 YSPTSPQYSPTSPQYSPTSPQYSPGSPLYSP 1735
Score = 67.8 bits (164), Expect = 4e-10
Identities = 43/90 (47%), Positives = 54/90 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + Q+SP ++SP+S P YSP+SP
Sbjct: 1660 SPSYSPTSPS---YSPTSPSY--SPTSPQYSPTSPQYSPT--SPSYSPTS-PSYSPTSPQ 1711
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSP SP YSP S + S
Sbjct: 1712 YSPTSPQYSPTSPQYSPGSPLYSPESESKS 1741
[82][TOP]
>UniRef100_B7PJA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
RepID=B7PJA3_IXOSC
Length = 1937
Score = 162 bits (409), Expect = 2e-38
Identities = 107/240 (44%), Positives = 127/240 (52%), Gaps = 65/240 (27%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+LLDAA++AE D L+GV+ENI++GQLA +GTG +L L
Sbjct: 1416 RHGINRQDTGALMRCSFEETVDVLLDAASHAEVDYLKGVSENIIMGQLARMGTGCFDLML 1475
Query: 181 NDEMLKNAIELQL-------------------------------------PSY----MDG 237
+ E K IE+ + PSY G
Sbjct: 1476 DAEKCKYGIEIPMNLPGMMGPLGPGVFFGSAATPLAGMSPQMTPWGQGATPSYGSGWSPG 1535
Query: 238 LEFGMTP--------ARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYV------ 375
L GMTP A S SG +SP + P SP S + SPY+
Sbjct: 1536 LGSGMTPGAAGFSPSAASDASGYSPASAGLSPGWSPQPG---SPAS-SPASPYIPSPVSP 1591
Query: 376 ----GGMAFSPSS------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
A++PSS SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1592 NYSPSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSP 1651
Score = 93.6 bits (231), Expect = 8e-18
Identities = 51/91 (56%), Positives = 59/91 (64%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S PY +SPNY SP+ S +P +SP+S P YSP+SP
Sbjct: 1575 SPASSPAS--PYIPSPVSPNY--SPSSPAYAPSSPSMTP--ASPTYSPTS-PSYSPTSPS 1627
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1628 YSPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1658
Score = 90.1 bits (222), Expect = 8e-17
Identities = 51/93 (54%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
MTPA S T SP+Y SPN + S + SP ++SP+S P YSP+S
Sbjct: 1607 MTPASPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSPTS-PSYSPTS 1660
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1661 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1693
Score = 84.7 bits (208), Expect = 4e-15
Identities = 52/102 (50%), Positives = 61/102 (59%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
PSY G TP+ S T SP+Y SP+ + ++SP ++PS
Sbjct: 1801 PSYSPGSP-QYTPSSPKYSPTSPTYSPTSPSY--SPSSPKYSPTSPKYSPT--SPTYTPS 1855
Query: 400 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1856 S-PKYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSP 1896
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1639 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1690
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1721
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SPSS P Y+P+SP
Sbjct: 1681 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPSS-PNYTPASPS 1732
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1733 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1763
Score = 82.8 bits (203), Expect = 1e-14
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN SP S + +SP G ++SPSS P YSP+SP
Sbjct: 1744 SPSYSPTSPS---YSPTSPSYSPSSPNY--SPQSPS-YSP--GSPSYSPSS-PKYSPTSP 1794
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP SP Y+P+SP YSPTSPTYSP
Sbjct: 1795 SYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSP 1826
Score = 82.8 bits (203), Expect = 1e-14
Identities = 51/104 (49%), Positives = 60/104 (57%)
Frame = +1
Query: 214 QLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFS 393
Q PSY G +P+ SP SP Y SP + +SP G ++
Sbjct: 1771 QSPSYSPG-----SPSYSP----------SSPKY--SPTSPSYSPTSPSYSP--GSPQYT 1811
Query: 394 PSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
PSS P YSP+SP YSPTSP YSP+SP YSPTSP YSPTSPTY+P
Sbjct: 1812 PSS-PKYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTP 1854
Score = 80.9 bits (198), Expect = 5e-14
Identities = 45/91 (49%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP S ++P ++SP+S P YSP+SP
Sbjct: 1695 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPSSPNYTP--ASPSYSPTS-PSYSPTSPS 1746
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+SP YSP SP+YSP
Sbjct: 1747 YSPTSPSYSPTSPSYSPSSPNYSPQSPSYSP 1777
Score = 78.6 bits (192), Expect = 3e-13
Identities = 46/92 (50%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + S + SP ++SP+S P YSP+SP
Sbjct: 1702 SPSYSPTSPS---YSPTSPSYSPSSPNYTPASPSYSPTSP-----SYSPTS-PSYSPTSP 1752
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+SP YSP SP YSP SP+YSP
Sbjct: 1753 SYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSP 1784
Score = 76.6 bits (187), Expect = 1e-12
Identities = 50/101 (49%), Positives = 57/101 (56%), Gaps = 10/101 (9%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S T SP Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1842 SPKYSPTSPTYTPS---SPKY--SPTSPQYSPTSPQYSPT--SPKYSPTS-PKYSPTSPT 1893
Query: 433 YSPTSPGYSPTSP----------GYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSPGYSP+SPTYSP
Sbjct: 1894 YSPTSPKYSPTSPTYSPTSPKGSSYSPTSPGYSPSSPTYSP 1934
Score = 75.9 bits (185), Expect = 2e-12
Identities = 49/94 (52%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ S T SP Y S + + SP S Q+SP +SP+S P YSP+SP
Sbjct: 1832 SPSSPKYSPTSPKYSPTSPTYTPS-SPKYSPTSP-QYSPT--SPQYSPTS-PKYSPTSPK 1886
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSP---TYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP +YSP
Sbjct: 1887 YSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSP 1920
Score = 71.2 bits (173), Expect = 4e-11
Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP+ S T SP Y SP + ++SP +SP+S P YSP+SP
Sbjct: 1853 TPSSPKYSPTSPQYSPTSPQY--SPTSPKYSPTSPKYSPT--SPTYSPTS-PKYSPTSPT 1907
Query: 433 YSPTSP---GYSPTSPGYSPTSPGYSPTSP 513
YSPTSP YSPTSPGYSP+SP YSPTSP
Sbjct: 1908 YSPTSPKGSSYSPTSPGYSPSSPTYSPTSP 1937
[83][TOP]
>UniRef100_B5RSM9 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RSM9_DEBHA
Length = 1749
Score = 162 bits (409), Expect = 2e-38
Identities = 99/205 (48%), Positives = 122/205 (59%), Gaps = 30/205 (14%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILL+A + AE D RG++EN+MLGQ+AP+GTG ++ +
Sbjct: 1393 RHGINRADTGALMRCSFEETVEILLEAGSAAELDDCRGISENVMLGQMAPLGTGAFDVMV 1452
Query: 181 NDEMLKNAIELQLPSYMDGLEF-------GMTPAR-----------------SPVSGTPY 288
+D+ML+ A + G E G TP R SP+ P
Sbjct: 1453 DDKMLQTAPSNIAVTTAAGNETGEYADDGGATPYRDYEMQDDKIQFEEGAGFSPIHTAPV 1512
Query: 289 HEG---MMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSP---SSSPGYSPSSPGYSPTSP 450
+G + S SP+ SP S SP GG+ SP +SP YSP+SP YSPTSP
Sbjct: 1513 SDGSGALTSYGGATSPS-PTSPFSYGATSPSFGGVT-SPGYGGTSPTYSPTSPSYSPTSP 1570
Query: 451 GYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1571 SYSPTSPSYSPTSPSYSPTSPSYSP 1595
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1576 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1627
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1658
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1583 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1634
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1665
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1590 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1641
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1672
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1597 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1648
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1679
Score = 83.2 bits (204), Expect = 1e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1604 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1655
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSP 1686
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1611 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1662
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSP 1693
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1618 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1669
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1670 YSPTSPSYSPTSPQYSPTSPQYSPTSPSYSP 1700
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1625 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1676
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1677 YSPTSPQYSPTSPQYSPTSPSYSPTSPSYSP 1707
Score = 81.6 bits (200), Expect = 3e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1632 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPQ 1683
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1684 YSPTSPQYSPTSPSYSPTSPSYSPTSPQYSP 1714
Score = 80.9 bits (198), Expect = 5e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1639 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PQYSPTSPQ 1690
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSP 1721
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1653 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPQYSPT--SPQYSPTS-PSYSPTSPS 1704
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP SP+YSP
Sbjct: 1705 YSPTSPQYSPTSPQYSPTSPQYSPGSPSYSP 1735
Score = 69.3 bits (168), Expect = 2e-10
Identities = 43/90 (47%), Positives = 54/90 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + Q+SP ++SP+S P YSP+SP
Sbjct: 1660 SPSYSPTSPS---YSPTSPSY--SPTSPQYSPTSPQYSPT--SPSYSPTS-PSYSPTSPQ 1711
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSP SP YSP S + S
Sbjct: 1712 YSPTSPQYSPTSPQYSPGSPSYSPESESKS 1741
[84][TOP]
>UniRef100_UPI0000E48671 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48671
Length = 1921
Score = 161 bits (407), Expect = 3e-38
Identities = 104/233 (44%), Positives = 124/233 (53%), Gaps = 58/233 (24%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D G LMRCSFEETVDIL DA A+ ETD L+GV+ENIMLG+LA +GTG +L L
Sbjct: 1416 RHGINRQDVGALMRCSFEETVDILNDAGAHGETDHLKGVSENIMLGKLAGLGTGSFDLLL 1475
Query: 181 NDEMLKNAIELQLPS-----YMDGLEFG--------MTPARSP--VSGTPYHEGMMSP-- 309
+ E K+ +E+ + M G+ FG M+P +P TP H SP
Sbjct: 1476 DAEKCKHGMEIPMGMGAGLVGMPGMLFGAMGSPSQSMSPQMTPWNQGATPMHGASWSPMM 1535
Query: 310 ---------------------NYLLSPNMRLSPMSDAQ--FSPYVGGMA------FSPSS 402
+ SP P S SPY+ A +SP+S
Sbjct: 1536 GSGMTPGGPGFSPANSESTGFSPAYSPAWSPQPQSPGSPANSPYIPSPAGPMSPSYSPAS 1595
Query: 403 ------------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPGYSP+SP YSPTSPGYSP SP YSPTSP YSPTSP+YSP
Sbjct: 1596 PSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSP 1648
Score = 91.3 bits (225), Expect = 4e-17
Identities = 52/94 (55%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS---SSPGYSPS 423
+PA SP +P G MSP+Y + L SP G SPS +SPGYSP+
Sbjct: 1573 SPANSPYIPSP--AGPMSPSYSPASPSYLPASPATPQSP--GYSPTSPSYSPTSPGYSPA 1628
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1629 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1662
Score = 87.0 bits (214), Expect = 7e-16
Identities = 48/93 (51%), Positives = 57/93 (61%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +PA S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1624 GYSPASPSYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1678
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1679 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1711
Score = 85.1 bits (209), Expect = 3e-15
Identities = 49/106 (46%), Positives = 59/106 (55%), Gaps = 14/106 (13%)
Frame = +1
Query: 250 MTPARSPVS--------GTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS- 402
M+P+ SP S TP G + SP + +SP ++SP+S
Sbjct: 1587 MSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPT--SPSYSPTSP 1644
Query: 403 -----SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1645 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1690
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/93 (50%), Positives = 56/93 (60%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1610 GYSPTSPSYSPTSPGYSPASPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1664
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1665 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1697
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1650 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1701
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1702 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1732
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1657 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1708
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1709 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1739
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1664 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1715
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1716 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1746
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1671 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1722
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1723 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1753
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1678 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1729
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1730 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1760
Score = 83.6 bits (205), Expect = 8e-15
Identities = 53/107 (49%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Frame = +1
Query: 214 QLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMA- 387
Q PSY G +P+ S T SP+Y SPN S + + SP +
Sbjct: 1782 QSPSYSPGSP-SYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSP 1840
Query: 388 -FSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SPSS P YSP+SP YSPTSP YSP SP YSPTSP YSP+SPTYSP
Sbjct: 1841 KYSPSS-PKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSP 1886
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/94 (52%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPG---YSPS 423
+P+ SP S + SP+Y S + + SP S + SPS SPG YSPS
Sbjct: 1741 SPSYSPTSPS---YSPTSPSYSPS-SPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPS 1796
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP YSPTSP +SP+SPTYSP
Sbjct: 1797 SPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSP 1830
Score = 81.6 bits (200), Expect = 3e-14
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1685 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1736
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP YSP
Sbjct: 1737 YSPTSPSYSPTSPSYSPTSPSYSPSSPKYSP 1767
Score = 81.6 bits (200), Expect = 3e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1692 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1743
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+SP YSPTSP+YSP
Sbjct: 1744 YSPTSPSYSPTSPSYSPSSPKYSPTSPSYSP 1774
Score = 81.6 bits (200), Expect = 3e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1699 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1750
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+SP YSPTSP YSPTSP+YSP
Sbjct: 1751 YSPTSPSYSPSSPKYSPTSPSYSPTSPSYSP 1781
Score = 80.5 bits (197), Expect = 7e-14
Identities = 42/74 (56%), Positives = 50/74 (67%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSP 483
SP+Y SP +SP G ++SPSS P YSP+SP YSPTSP YSPTSP +SP
Sbjct: 1769 SPSY--SPTSPSYSPQSPSYSP--GSPSYSPSS-PKYSPTSPSYSPTSPSYSPTSPNFSP 1823
Query: 484 TSPGYSPTSPTYSP 525
+SP YSP SP+YSP
Sbjct: 1824 SSPTYSPASPSYSP 1837
Score = 73.9 bits (180), Expect = 6e-12
Identities = 44/83 (53%), Positives = 52/83 (62%), Gaps = 9/83 (10%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP S ++SP +SP+S SP YSP+SP YSP+SP YSPT
Sbjct: 1832 SPSY--SPTSPKYSPSSPKYSPT--SPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPT 1887
Query: 466 SP---GYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP+YSP
Sbjct: 1888 SPKGSTYSPTSPSYSPTSPSYSP 1910
Score = 72.0 bits (175), Expect = 2e-11
Identities = 45/90 (50%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA S T SP Y SP + ++SP +SP+S P YSPSSP
Sbjct: 1829 SPASPSYSPTSPKYSPSSPKY--SPTSPTYSPTSPKYSP--ASPTYSPTS-PKYSPSSPT 1883
Query: 433 YSPTSPG---YSPTSPGYSPTSPGYSPTSP 513
YSPTSP YSPTSP YSPTSP YSPTSP
Sbjct: 1884 YSPTSPKGSTYSPTSPSYSPTSPSYSPTSP 1913
[85][TOP]
>UniRef100_O94231 RNA polymerase II largest subunit (Fragment) n=1 Tax=Kluyveromyces
lactis RepID=O94231_KLULA
Length = 414
Score = 160 bits (406), Expect = 4e-38
Identities = 99/196 (50%), Positives = 118/196 (60%), Gaps = 21/196 (10%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG NR DTG LMRCSFEETV+IL +A A AE D RGV+EN++LGQ+APIGTG ++ +
Sbjct: 81 RHGFNRADTGALMRCSFEETVEILFEAGAAAELDDCRGVSENVILGQIAPIGTGAFDVMI 140
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA- 357
+DE L +G E G TP S SG E + + SP + S +DA
Sbjct: 141 DDESLVKYQPEHKEVKTEGQEGGATP-YSNESGLANAEINVKDELMFSPLVE-SGGADAL 198
Query: 358 --QFSPYVG---GMAFSP---------------SSSPGYSPSSPGYSPTSPGYSPTSPGY 477
F+ Y G G A SP SSPG+SP+SPGYSPTSP YSPTSP Y
Sbjct: 199 AGGFTAYGGADYGSATSPFSGYGNGPTSPGFGEVSSPGFSPTSPGYSPTSPSYSPTSPSY 258
Query: 478 SPTSPGYSPTSPTYSP 525
SPTSP YSPTSP+YSP
Sbjct: 259 SPTSPSYSPTSPSYSP 274
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 262 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 313
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 314 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 344
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 269 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 320
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 321 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 351
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 276 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 327
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 328 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 358
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 283 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 334
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 335 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 365
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 290 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 341
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 342 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 372
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 297 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 348
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 349 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 379
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 304 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 355
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 356 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 386
Score = 83.2 bits (204), Expect = 1e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 311 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 362
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 363 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSP 393
Score = 72.4 bits (176), Expect = 2e-11
Identities = 45/91 (49%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 318 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 369
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP S YSP
Sbjct: 370 YSPTSPSYSPTSPSYSPTSPQYSPGS--YSP 398
[86][TOP]
>UniRef100_Q5ACI7 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q5ACI7_CANAL
Length = 1728
Score = 160 bits (405), Expect = 5e-38
Identities = 94/203 (46%), Positives = 116/203 (57%), Gaps = 28/203 (13%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR+DTG LMRCSFEETV+ILLDAAA AE D +G++EN+MLGQ+AP+GTG +L +
Sbjct: 1388 RHGINRSDTGALMRCSFEETVEILLDAAAAAELDDCKGISENVMLGQMAPLGTGSFDLMV 1447
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPY--HEGMMSPNYLLSPNMRLSPMSD 354
+D ML+ A PS M M TPY +E N + SP+
Sbjct: 1448 DDRMLQKA-----PSSM-----AMDDIADGGGATPYKDYENARDENIDIDAGAGFSPIHI 1497
Query: 355 AQFS-------PYVGGMAFSPSSSP-------------------GYSPSSPGYSPTSPGY 456
AQ + GG SP+++ GYSP+SP YSPTSP Y
Sbjct: 1498 AQMNEGNIGGLTSYGGQPTSPAATSPFSYGYNSITSPGYTSPGYGYSPTSPSYSPTSPSY 1557
Query: 457 SPTSPGYSPTSPGYSPTSPTYSP 525
+PTSP YSPTSP Y+PTSP YSP
Sbjct: 1558 APTSPAYSPTSPSYAPTSPAYSP 1580
Score = 84.3 bits (207), Expect = 5e-15
Identities = 47/93 (50%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 TPARSPVSGT--PYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
+PA SP S + P + SP + Q+SP ++SP+S P YSP+S
Sbjct: 1575 SPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPT--SPSYSPTS-PSYSPTS 1631
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1632 PSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSP 1664
Score = 84.3 bits (207), Expect = 5e-15
Identities = 50/95 (52%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSG----TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSP 420
+PA SP S T SP+Y SP + +SP A+SP+S P YSP
Sbjct: 1596 SPAYSPTSPSYSPTSPQYSPTSPSY--SPTSPSYSPTSPSYSPT--SPAYSPTS-PSYSP 1650
Query: 421 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1651 TSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSP 1685
Score = 84.0 bits (206), Expect = 6e-15
Identities = 48/91 (52%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1589 SPAYSPTSPA---YSPTSPSY--SPTSPQYSPTSPSYSPT--SPSYSPTS-PSYSPTSPA 1640
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPQYSPTSPSYSP 1671
Score = 81.6 bits (200), Expect = 3e-14
Identities = 48/91 (52%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S SP+Y SP + Q+SP ++SP+S P YSP+SP
Sbjct: 1631 SPSYSPTSPA---YSPTSPSY--SPTSPSYSPTSPQYSPT--SPSYSPTS-PQYSPTSPS 1682
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1683 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1713
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1617 SPSYSPTSPS---YSPTSPSY--SPTSPAYSPTSPSYSPT--SPSYSPTS-PQYSPTSPS 1668
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1669 YSPTSPQYSPTSPSYSPTSPQYSPTSPQYSP 1699
Score = 69.3 bits (168), Expect = 2e-10
Identities = 44/91 (48%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Frame = +1
Query: 253 TPARSPVSG----TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSP 420
+PA SP S T SP Y SP + Q+SP ++SP+S P YSP
Sbjct: 1638 SPAYSPTSPSYSPTSPSYSPTSPQY--SPTSPSYSPTSPQYSPT--SPSYSPTS-PQYSP 1692
Query: 421 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP 513
+SP YSPTSP YSPTSP YSP SPGY P P
Sbjct: 1693 TSPQYSPTSPQYSPTSPQYSPGSPGYEPEPP 1723
[87][TOP]
>UniRef100_C8Z6G2 Rpo21p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8Z6G2_YEAST
Length = 1733
Score = 160 bits (405), Expect = 5e-38
Identities = 92/201 (45%), Positives = 124/201 (61%), Gaps = 26/201 (12%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG NR++TG LMRCSFEETV+IL +A A AE D RGV+EN++LGQ+APIGTG ++ +
Sbjct: 1386 RHGFNRSNTGALMRCSFEETVEILFEAGASAELDDCRGVSENVILGQMAPIGTGAFDVMI 1445
Query: 181 NDE-MLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA 357
++E ++K E ++ DG + G+TP + G+++ + + + SP+ D+
Sbjct: 1446 DEESLVKYMPEQKITEIEDGQDGGVTPYSN-------ESGLVNADLDVKDELMFSPLVDS 1498
Query: 358 --------QFSPYVG---GMAFSP--------------SSSPGYSPSSPGYSPTSPGYSP 462
F+ Y G G A SP SSPG+SP+SP YSPTSP YSP
Sbjct: 1499 GSNDAMAGGFTAYGGADYGEATSPFGAYGEAPTSPGFGVSSPGFSPTSPTYSPTSPAYSP 1558
Query: 463 TSPGYSPTSPGYSPTSPTYSP 525
TSP YSPTSP YSPTSP+YSP
Sbjct: 1559 TSPSYSPTSPSYSPTSPSYSP 1579
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/93 (50%), Positives = 56/93 (60%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1541 GFSPTSPTYSPTSPAYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1595
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1596 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1628
Score = 85.1 bits (209), Expect = 3e-15
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1553 SPAYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1604
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1635
Score = 85.1 bits (209), Expect = 3e-15
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1623 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPAYSPTS-PSYSPTSPS 1674
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1705
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1567 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1618
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1649
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1574 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1625
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1656
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1588 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1639
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYSP 1670
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1595 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1646
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1647 YSPTSPSYSPTSPAYSPTSPSYSPTSPSYSP 1677
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1602 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1653
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSP 1684
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1609 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPA 1660
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1691
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1637 SPSYSPTSPS---YSPTSPSY--SPTSPAYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1688
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSPGYSP SP YSP
Sbjct: 1689 YSPTSPNYSPTSPSYSPTSPGYSPGSPAYSP 1719
[88][TOP]
>UniRef100_C7GKZ2 Rpo21p n=2 Tax=Saccharomyces cerevisiae RepID=C7GKZ2_YEAS2
Length = 1733
Score = 160 bits (405), Expect = 5e-38
Identities = 92/201 (45%), Positives = 124/201 (61%), Gaps = 26/201 (12%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG NR++TG LMRCSFEETV+IL +A A AE D RGV+EN++LGQ+APIGTG ++ +
Sbjct: 1386 RHGFNRSNTGALMRCSFEETVEILFEAGASAELDDCRGVSENVILGQMAPIGTGAFDVMI 1445
Query: 181 NDE-MLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA 357
++E ++K E ++ DG + G+TP + G+++ + + + SP+ D+
Sbjct: 1446 DEESLVKYMPEQKITEIEDGQDGGVTPYSN-------ESGLVNADLDVKDELMFSPLVDS 1498
Query: 358 --------QFSPYVG---GMAFSP--------------SSSPGYSPSSPGYSPTSPGYSP 462
F+ Y G G A SP SSPG+SP+SP YSPTSP YSP
Sbjct: 1499 GSNDAMAGGFTAYGGADYGEATSPFGAYGEAPTSPGFGVSSPGFSPTSPTYSPTSPAYSP 1558
Query: 463 TSPGYSPTSPGYSPTSPTYSP 525
TSP YSPTSP YSPTSP+YSP
Sbjct: 1559 TSPSYSPTSPSYSPTSPSYSP 1579
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/93 (50%), Positives = 56/93 (60%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1541 GFSPTSPTYSPTSPAYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1595
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1596 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1628
Score = 85.1 bits (209), Expect = 3e-15
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1553 SPAYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1604
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1635
Score = 85.1 bits (209), Expect = 3e-15
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1623 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPAYSPTS-PSYSPTSPS 1674
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1705
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1567 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1618
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1649
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1574 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1625
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1656
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1588 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1639
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYSP 1670
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1595 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1646
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1647 YSPTSPSYSPTSPAYSPTSPSYSPTSPSYSP 1677
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1602 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1653
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSP 1684
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1609 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPA 1660
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1691
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1637 SPSYSPTSPS---YSPTSPSY--SPTSPAYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1688
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSPGYSP SP YSP
Sbjct: 1689 YSPTSPNYSPTSPSYSPTSPGYSPGSPAYSP 1719
[89][TOP]
>UniRef100_C4YN85 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=C4YN85_CANAL
Length = 1742
Score = 160 bits (405), Expect = 5e-38
Identities = 94/203 (46%), Positives = 116/203 (57%), Gaps = 28/203 (13%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR+DTG LMRCSFEETV+ILLDAAA AE D +G++EN+MLGQ+AP+GTG +L +
Sbjct: 1388 RHGINRSDTGALMRCSFEETVEILLDAAAAAELDDCKGISENVMLGQMAPLGTGSFDLMV 1447
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPY--HEGMMSPNYLLSPNMRLSPMSD 354
+D ML+ A PS M M TPY +E N + SP+
Sbjct: 1448 DDRMLQKA-----PSSM-----AMDDIADGGGATPYKDYENARDENIDIDAGAGFSPIHI 1497
Query: 355 AQFS-------PYVGGMAFSPSSSP-------------------GYSPSSPGYSPTSPGY 456
AQ + GG SP+++ GYSP+SP YSPTSP Y
Sbjct: 1498 AQMNEGNIGGLTSYGGQPTSPAATSPFSYGYNSITSPGYTSPGYGYSPTSPSYSPTSPSY 1557
Query: 457 SPTSPGYSPTSPGYSPTSPTYSP 525
+PTSP YSPTSP Y+PTSP YSP
Sbjct: 1558 APTSPAYSPTSPSYAPTSPAYSP 1580
Score = 84.3 bits (207), Expect = 5e-15
Identities = 47/93 (50%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 TPARSPVSGT--PYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
+PA SP S + P + SP + Q+SP ++SP+S P YSP+S
Sbjct: 1589 SPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPT--SPSYSPTS-PSYSPTS 1645
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1646 PSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSP 1678
Score = 84.3 bits (207), Expect = 5e-15
Identities = 50/95 (52%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSG----TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSP 420
+PA SP S T SP+Y SP + +SP A+SP+S P YSP
Sbjct: 1610 SPAYSPTSPSYSPTSPQYSPTSPSY--SPTSPSYSPTSPSYSPT--SPAYSPTS-PSYSP 1664
Query: 421 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1665 TSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSP 1699
Score = 84.0 bits (206), Expect = 6e-15
Identities = 48/91 (52%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1603 SPAYSPTSPA---YSPTSPSY--SPTSPQYSPTSPSYSPT--SPSYSPTS-PSYSPTSPA 1654
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPQYSPTSPSYSP 1685
Score = 81.6 bits (200), Expect = 3e-14
Identities = 48/91 (52%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S SP+Y SP + Q+SP ++SP+S P YSP+SP
Sbjct: 1645 SPSYSPTSPA---YSPTSPSY--SPTSPSYSPTSPQYSPT--SPSYSPTS-PQYSPTSPS 1696
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1697 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1727
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1631 SPSYSPTSPS---YSPTSPSY--SPTSPAYSPTSPSYSPT--SPSYSPTS-PQYSPTSPS 1682
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1683 YSPTSPQYSPTSPSYSPTSPQYSPTSPQYSP 1713
Score = 69.3 bits (168), Expect = 2e-10
Identities = 44/91 (48%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Frame = +1
Query: 253 TPARSPVSG----TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSP 420
+PA SP S T SP Y SP + Q+SP ++SP+S P YSP
Sbjct: 1652 SPAYSPTSPSYSPTSPSYSPTSPQY--SPTSPSYSPTSPQYSPT--SPSYSPTS-PQYSP 1706
Query: 421 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP 513
+SP YSPTSP YSPTSP YSP SPGY P P
Sbjct: 1707 TSPQYSPTSPQYSPTSPQYSPGSPGYEPEPP 1737
[90][TOP]
>UniRef100_B3LH31 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae RM11-1a
RepID=B3LH31_YEAS1
Length = 1733
Score = 160 bits (405), Expect = 5e-38
Identities = 92/201 (45%), Positives = 124/201 (61%), Gaps = 26/201 (12%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG NR++TG LMRCSFEETV+IL +A A AE D RGV+EN++LGQ+APIGTG ++ +
Sbjct: 1386 RHGFNRSNTGALMRCSFEETVEILFEAGASAELDDCRGVSENVILGQMAPIGTGAFDVMI 1445
Query: 181 NDE-MLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA 357
++E ++K E ++ DG + G+TP + G+++ + + + SP+ D+
Sbjct: 1446 DEESLVKYMPEQKITEIEDGQDGGVTPYSN-------ESGLVNADLDVKDELMFSPLVDS 1498
Query: 358 --------QFSPYVG---GMAFSP--------------SSSPGYSPSSPGYSPTSPGYSP 462
F+ Y G G A SP SSPG+SP+SP YSPTSP YSP
Sbjct: 1499 GSNDAMAGGFTAYGGADYGEATSPFGAYGEPPTSPGFGVSSPGFSPTSPTYSPTSPAYSP 1558
Query: 463 TSPGYSPTSPGYSPTSPTYSP 525
TSP YSPTSP YSPTSP+YSP
Sbjct: 1559 TSPSYSPTSPSYSPTSPSYSP 1579
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/93 (50%), Positives = 56/93 (60%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1541 GFSPTSPTYSPTSPAYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1595
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1596 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1628
Score = 85.1 bits (209), Expect = 3e-15
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1553 SPAYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1604
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1635
Score = 85.1 bits (209), Expect = 3e-15
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1623 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPAYSPTS-PSYSPTSPS 1674
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1705
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1567 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1618
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1649
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1574 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1625
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1656
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1588 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1639
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYSP 1670
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1595 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1646
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1647 YSPTSPSYSPTSPAYSPTSPSYSPTSPSYSP 1677
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1602 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1653
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSP 1684
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1609 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPA 1660
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1691
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1637 SPSYSPTSPS---YSPTSPSY--SPTSPAYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1688
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSPGYSP SP YSP
Sbjct: 1689 YSPTSPNYSPTSPSYSPTSPGYSPGSPAYSP 1719
[91][TOP]
>UniRef100_P04050 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Saccharomyces
cerevisiae RepID=RPB1_YEAST
Length = 1733
Score = 160 bits (405), Expect = 5e-38
Identities = 92/201 (45%), Positives = 124/201 (61%), Gaps = 26/201 (12%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG NR++TG LMRCSFEETV+IL +A A AE D RGV+EN++LGQ+APIGTG ++ +
Sbjct: 1386 RHGFNRSNTGALMRCSFEETVEILFEAGASAELDDCRGVSENVILGQMAPIGTGAFDVMI 1445
Query: 181 NDE-MLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA 357
++E ++K E ++ DG + G+TP + G+++ + + + SP+ D+
Sbjct: 1446 DEESLVKYMPEQKITEIEDGQDGGVTPYSN-------ESGLVNADLDVKDELMFSPLVDS 1498
Query: 358 --------QFSPYVG---GMAFSP--------------SSSPGYSPSSPGYSPTSPGYSP 462
F+ Y G G A SP SSPG+SP+SP YSPTSP YSP
Sbjct: 1499 GSNDAMAGGFTAYGGADYGEATSPFGAYGEAPTSPGFGVSSPGFSPTSPTYSPTSPAYSP 1558
Query: 463 TSPGYSPTSPGYSPTSPTYSP 525
TSP YSPTSP YSPTSP+YSP
Sbjct: 1559 TSPSYSPTSPSYSPTSPSYSP 1579
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/93 (50%), Positives = 56/93 (60%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1541 GFSPTSPTYSPTSPAYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1595
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1596 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1628
Score = 85.1 bits (209), Expect = 3e-15
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1553 SPAYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1604
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1605 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1635
Score = 85.1 bits (209), Expect = 3e-15
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1623 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPAYSPTS-PSYSPTSPS 1674
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1675 YSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1705
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1567 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1618
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1649
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1574 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1625
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1656
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1588 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1639
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPAYSPTSPSYSP 1670
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1595 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1646
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1647 YSPTSPSYSPTSPAYSPTSPSYSPTSPSYSP 1677
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1602 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1653
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1654 YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSP 1684
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1609 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPA 1660
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1661 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1691
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1637 SPSYSPTSPS---YSPTSPSY--SPTSPAYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1688
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSPGYSP SP YSP
Sbjct: 1689 YSPTSPNYSPTSPSYSPTSPGYSPGSPAYSP 1719
[92][TOP]
>UniRef100_Q6FQS9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FQS9_CANGA
Length = 1715
Score = 160 bits (404), Expect = 7e-38
Identities = 93/202 (46%), Positives = 122/202 (60%), Gaps = 27/202 (13%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG NR+ TG LMRCSFEETV+IL +A A AE D RGV+EN++LGQ+APIGTG ++ +
Sbjct: 1386 RHGFNRSSTGALMRCSFEETVEILFEAGASAELDDCRGVSENVILGQMAPIGTGAFDVMI 1445
Query: 181 NDE-MLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA 357
++E ++K E ++ DG + G TP + G+++ + + + SP+ DA
Sbjct: 1446 DEESLVKYMPEQKITELEDGQDGGATPYSN-------EAGLVNTDIDVKDELMFSPLVDA 1498
Query: 358 --------QFSPYVG---GMAFSP---------------SSSPGYSPSSPGYSPTSPGYS 459
F+ Y G G A SP SSPG+SP+SP YSPTSP YS
Sbjct: 1499 GSSDAMSGGFTAYGGAEYGGATSPFGAYGDAPASPGFGGVSSPGFSPTSPAYSPTSPSYS 1558
Query: 460 PTSPGYSPTSPGYSPTSPTYSP 525
PTSP YSPTSP YSPTSP+YSP
Sbjct: 1559 PTSPSYSPTSPSYSPTSPSYSP 1580
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/93 (50%), Positives = 56/93 (60%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1542 GFSPTSPAYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1596
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1597 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1629
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1568 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1619
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1650
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1575 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1626
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1657
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1582 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1633
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1634 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1664
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1589 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1640
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1641 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1671
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1596 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1647
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1648 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1678
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1603 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1654
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1685
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1610 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1661
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1662 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1692
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1617 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1668
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1669 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1699
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1624 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1675
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP SPTYSP
Sbjct: 1676 YSPTSPSYSPTSPSYSPTSPSYSPGSPTYSP 1706
[93][TOP]
>UniRef100_C5GKA7 DNA-directed RNA polymerase n=2 Tax=Ajellomyces dermatitidis
RepID=C5GKA7_AJEDR
Length = 1746
Score = 160 bits (404), Expect = 7e-38
Identities = 100/237 (42%), Positives = 123/237 (51%), Gaps = 62/237 (26%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILLDAAA+AE D RGV+EN++LGQ+AP GTG+ ++YL
Sbjct: 1415 RHGINRADTGALMRCSFEETVEILLDAAAFAELDDCRGVSENLILGQMAPAGTGEFDVYL 1474
Query: 181 NDEMLKNAIELQLPSYMDGL----------------------------EFGMTPARSPVS 276
+ +ML + DG + +P R S
Sbjct: 1475 DQDMLMGVVSSNAGLMTDGKGLLGDGAATPYDSSSPLRDNMYIGSPDPDSNFSPIRQAGS 1534
Query: 277 GTPY---------HEGMMSPNYLLSPNMRLSPMSDAQFSP----YVGGMAFSPS------ 399
TP G SP+ SP SP S SP Y +SP+
Sbjct: 1535 ETPAGFTEYQPSGFSGGFSPHGARSPGGGYSPTSPFNTSPTSPRYSPSSGYSPTSPGMSI 1594
Query: 400 ------SSPGYSPSSPGYSPTSPGYSPTSPG---------YSPTSPGYSPTSPTYSP 525
SSPG+SP+SP ++PTSP YSPTSPG YSPTSPG+SPTSP+YSP
Sbjct: 1595 TSPRFMSSPGFSPASPAFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSP 1651
Score = 69.7 bits (169), Expect = 1e-10
Identities = 51/129 (39%), Positives = 62/129 (48%), Gaps = 38/129 (29%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-----LSPNMRLSPMSDAQFSPYVGGMAFSPSS----- 402
+PA SP S Y + SP+Y SP + FSP AFSP+S
Sbjct: 1616 SPAYSPTS-PGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSP--ASPAFSPTSPSYSP 1672
Query: 403 -------------------SPGYSPSSPGYSPTSPG-YSPTSPGYS--------PTSPGY 498
SP Y+P+SPG+SPTSP YSPTSP +S PTSPGY
Sbjct: 1673 TSPALGISTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGY 1732
Query: 499 SPTSPTYSP 525
SPTSPT++P
Sbjct: 1733 SPTSPTFNP 1741
Score = 65.5 bits (158), Expect = 2e-09
Identities = 42/91 (46%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA--QFSPYVGGMAFSPSSSPGYSPSS 426
+PA S T SP +S LSP S +++P G +SP+S YSP+S
Sbjct: 1657 SPASPAFSPTSPSYSPTSPALGISTGRHLSPTSPTSPKYTPTSPG--WSPTSPETYSPTS 1714
Query: 427 PGYS--PTSPGYSPTSPGYSPTSPGYSPTSP 513
P +S PTSPG PTSPGYSPTSP ++PTSP
Sbjct: 1715 PNFSGSPTSPG-GPTSPGYSPTSPTFNPTSP 1744
[94][TOP]
>UniRef100_C5E245 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5E245_LACTC
Length = 1740
Score = 160 bits (404), Expect = 7e-38
Identities = 93/209 (44%), Positives = 122/209 (58%), Gaps = 34/209 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG NR+DTG LMRCSFEETV+IL +A A AE D RGV+EN++LGQ+APIGTG ++ +
Sbjct: 1387 RHGFNRSDTGALMRCSFEETVEILFEAGAAAELDDCRGVSENVLLGQVAPIGTGAFDVMI 1446
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPM---- 348
++E L ++ M+ + G AR+P + G+++ + + + SP+
Sbjct: 1447 DEESL---VKFMPQQKMEEVADGHDGARTPYNN---ESGLVNADIDVKDELMFSPLVDSG 1500
Query: 349 ---------------------------SDAQFSPYVGGMA---FSPSSSPGYSPSSPGYS 438
DA SP GG+A FSP +SP YSP+SP YS
Sbjct: 1501 STDAMSGGFTAYGGADYGGASSPFSGYGDAPTSPGFGGVASPGFSP-TSPAYSPTSPSYS 1559
Query: 439 PTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
PTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1560 PTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1588
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1569 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1620
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1651
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1576 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1627
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1658
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1583 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1634
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1665
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1590 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1641
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1642 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1672
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1597 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1648
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1679
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1604 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1655
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1656 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1686
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1611 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1662
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1663 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1693
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1618 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1669
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1670 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1700
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1625 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1676
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1677 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1707
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1632 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1683
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1714
Score = 81.3 bits (199), Expect = 4e-14
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1639 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1690
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP SP+YSP
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPGSPSYSP 1721
Score = 71.2 bits (173), Expect = 4e-11
Identities = 42/87 (48%), Positives = 52/87 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1646 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1697
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSP 513
YSPTSP YSPTSP YSP SP YSP SP
Sbjct: 1698 YSPTSPSYSPTSPSYSPGSPSYSPGSP 1724
[95][TOP]
>UniRef100_UPI000186501C hypothetical protein BRAFLDRAFT_115025 n=1 Tax=Branchiostoma floridae
RepID=UPI000186501C
Length = 1956
Score = 159 bits (402), Expect = 1e-37
Identities = 103/245 (42%), Positives = 124/245 (50%), Gaps = 70/245 (28%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR + GPLM+CSFEETVDIL+++A+++ETD + GV+ENIMLGQLA IGTG +L L
Sbjct: 1412 RHGINRQEVGPLMKCSFEETVDILMESASHSETDFMWGVSENIMLGQLARIGTGSFDLML 1471
Query: 181 NDEMLKNAIELQ---------------------------------------LPSY----M 231
+ E K +E+ P+Y
Sbjct: 1472 DAEKCKYGMEIPTNLVGGGLMAGPGPGMFFGNAGSPTASMSPQMTPWQQVGTPAYGGAWS 1531
Query: 232 DGLEFGMTP-----------------------ARSPVSGTPYHEGMMSPNYLLSPNMRLS 342
GL GMTP A SP G+P G SP Y+ SP +S
Sbjct: 1532 PGLGSGMTPGAAGFSPSAASDASGMSPAGYSPAWSPTPGSPGSPGPASP-YIPSPGGPMS 1590
Query: 343 PMSDAQFSPYV----GGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTS 510
P Y+ GGM SPGYSP+SP YSPTSP YSP SP YSPTSP YSPTS
Sbjct: 1591 PSYSPASPAYMPRSPGGMT---PQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTS 1647
Query: 511 PTYSP 525
P+YSP
Sbjct: 1648 PSYSP 1652
Score = 94.4 bits (233), Expect = 4e-18
Identities = 54/103 (52%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+YM GMTP S T SP+Y SPN + S + SP ++SP
Sbjct: 1598 PAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSP-----SYSP 1652
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1736
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1661 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1712
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1743
Score = 82.4 bits (202), Expect = 2e-14
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1668 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1719
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP Y+P
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYTP 1750
Score = 82.0 bits (201), Expect = 2e-14
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1675 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1726
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP YSP
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYTPTSPKYSP 1757
Score = 82.0 bits (201), Expect = 2e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1682 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1733
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 1734 YSPTSPSYSPTSPNYTPTSPKYSPTSPSYSP 1764
Score = 82.0 bits (201), Expect = 2e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1689 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1740
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 1741 YSPTSPNYTPTSPKYSPTSPSYSPTSPSYSP 1771
Score = 80.1 bits (196), Expect = 9e-14
Identities = 45/91 (49%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1696 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPN 1747
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSP SP+YSP
Sbjct: 1748 YTPTSPKYSPTSPSYSPTSPSYSPASPSYSP 1778
Score = 80.1 bits (196), Expect = 9e-14
Identities = 45/91 (49%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P Y+P+SP
Sbjct: 1703 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PNYTPTSPK 1754
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP SP YSPTSP+YSP
Sbjct: 1755 YSPTSPSYSPTSPSYSPASPSYSPTSPSYSP 1785
Score = 79.7 bits (195), Expect = 1e-13
Identities = 48/110 (43%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Frame = +1
Query: 214 QLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFS 393
Q PSY +P+ SP S P + SP+ S ++SP +S
Sbjct: 1793 QSPSYSPS-----SPSYSPSSPNPSSPKYTPTSPKYSPSSPKYSPSSPKYSP--TSPTYS 1845
Query: 394 PSS------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
PSS SP YSPS+P Y+PTSP YSP SP Y+PTSP YSPTSP+Y+P
Sbjct: 1846 PSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTP 1895
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/92 (48%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + + SP ++SP+S P YSP+SP
Sbjct: 1724 SPSYSPTSPS---YSPTSPSYSPTSPNYTPTSPKYSPTSP-----SYSPTS-PSYSPASP 1774
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+SP YSP SP YSP+SP+YSP
Sbjct: 1775 SYSPTSPSYSPSSPNYSPQSPSYSPSSPSYSP 1806
Score = 77.8 bits (190), Expect = 4e-13
Identities = 49/104 (47%), Positives = 57/104 (54%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
TP S + SP Y SP S A++SP ++SPS+ SP Y
Sbjct: 1817 TPTSPKYSPSSPKYSPSSPKY--SPTSPTYSPSSAKYSP--ASPSYSPSTPKYTPTSPKY 1872
Query: 415 SPSSPGYSPTSPGYSPTSPGY-------SPTSPGYSPTSPTYSP 525
SP+SP Y+PTSP YSPTSP Y SPTSP YSPTSPTYSP
Sbjct: 1873 SPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSP 1916
Score = 74.3 bits (181), Expect = 5e-12
Identities = 46/95 (48%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS----SPGYSP 420
+PA S T SPNY SP S + +SP ++SPSS SP Y+P
Sbjct: 1770 SPASPSYSPTSPSYSPSSPNY--------SPQSPS-YSP--SSPSYSPSSPNPSSPKYTP 1818
Query: 421 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP YSP+SP YSP+SP YSPTSP YSP+S YSP
Sbjct: 1819 TSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSP 1853
Score = 72.8 bits (177), Expect = 1e-11
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP TP + SP Y SP + ++SP +++P + P YSP+SP
Sbjct: 1855 SPSYSP--STPKYTPT-SPKY--SPASPTYTPTSPKYSPT--SPSYTPDT-PKYSPTSPK 1906
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPT+PGYSP SPTYSP
Sbjct: 1907 YSPTSPTYSPTSPKGSTYSPTTPGYSPASPTYSP 1940
Score = 62.4 bits (150), Expect = 2e-08
Identities = 31/45 (68%), Positives = 35/45 (77%), Gaps = 3/45 (6%)
Frame = +1
Query: 388 FSPSSSPGYSPSSPGYSPTSPG---YSPTSPGYSPTSPGYSPTSP 513
+SP+S P YSP+SP YSPTSP YSPT+PGYSP SP YSP SP
Sbjct: 1900 YSPTS-PKYSPTSPTYSPTSPKGSTYSPTTPGYSPASPTYSPESP 1943
[96][TOP]
>UniRef100_C3ZES3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3ZES3_BRAFL
Length = 1934
Score = 159 bits (402), Expect = 1e-37
Identities = 103/245 (42%), Positives = 124/245 (50%), Gaps = 70/245 (28%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR + GPLM+CSFEETVDIL+++A+++ETD + GV+ENIMLGQLA IGTG +L L
Sbjct: 1412 RHGINRQEVGPLMKCSFEETVDILMESASHSETDFMWGVSENIMLGQLARIGTGSFDLML 1471
Query: 181 NDEMLKNAIELQ---------------------------------------LPSY----M 231
+ E K +E+ P+Y
Sbjct: 1472 DAEKCKYGMEIPTNLVGGGLMAGPGPGMFFGNAGSPTASMSPQMTPWQQVGTPAYGGAWS 1531
Query: 232 DGLEFGMTP-----------------------ARSPVSGTPYHEGMMSPNYLLSPNMRLS 342
GL GMTP A SP G+P G SP Y+ SP +S
Sbjct: 1532 PGLGSGMTPGAAGFSPSAASDASGMSPAGYSPAWSPTPGSPGSPGPASP-YIPSPGGPMS 1590
Query: 343 PMSDAQFSPYV----GGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTS 510
P Y+ GGM SPGYSP+SP YSPTSP YSP SP YSPTSP YSPTS
Sbjct: 1591 PSYSPASPAYMPRSPGGMT---PQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTS 1647
Query: 511 PTYSP 525
P+YSP
Sbjct: 1648 PSYSP 1652
Score = 94.4 bits (233), Expect = 4e-18
Identities = 54/103 (52%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+YM GMTP S T SP+Y SPN + S + SP ++SP
Sbjct: 1598 PAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSP-----SYSP 1652
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1736
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1661 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1712
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1743
Score = 82.4 bits (202), Expect = 2e-14
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1668 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1719
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP Y+P
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYTP 1750
Score = 82.0 bits (201), Expect = 2e-14
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1675 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1726
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP YSP
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPNYTPTSPKYSP 1757
Score = 82.0 bits (201), Expect = 2e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1682 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1733
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 1734 YSPTSPSYSPTSPNYTPTSPKYSPTSPSYSP 1764
Score = 82.0 bits (201), Expect = 2e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1689 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1740
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 1741 YSPTSPNYTPTSPKYSPTSPSYSPTSPSYSP 1771
Score = 80.1 bits (196), Expect = 9e-14
Identities = 45/91 (49%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1696 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPN 1747
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSP SP+YSP
Sbjct: 1748 YTPTSPKYSPTSPSYSPTSPSYSPASPSYSP 1778
Score = 77.8 bits (190), Expect = 4e-13
Identities = 53/123 (43%), Positives = 63/123 (51%), Gaps = 21/123 (17%)
Frame = +1
Query: 220 PSYMDGLEFGMT---PARSPVSGTPYHEGMMSPNYL-----LSPNMRLSPMSDAQFSPYV 375
PSY + +T P +PV SP Y SP S A++SP
Sbjct: 1774 PSYSPTILSNLTQLQPHLTPVHSHVTQYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSP-- 1831
Query: 376 GGMAFSPSS------SPGYSPSSPGYSPTSPGYSPTSPGY-------SPTSPGYSPTSPT 516
++SPS+ SP YSP+SP Y+PTSP YSPTSP Y SPTSP YSPTSPT
Sbjct: 1832 ASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPT 1891
Query: 517 YSP 525
YSP
Sbjct: 1892 YSP 1894
Score = 72.8 bits (177), Expect = 1e-11
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP TP + SP Y SP + ++SP +++P + P YSP+SP
Sbjct: 1833 SPSYSP--STPKYTPT-SPKY--SPASPTYTPTSPKYSPT--SPSYTPDT-PKYSPTSPK 1884
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPT+PGYSP SPTYSP
Sbjct: 1885 YSPTSPTYSPTSPKGSTYSPTTPGYSPASPTYSP 1918
Score = 68.6 bits (166), Expect = 3e-10
Identities = 40/85 (47%), Positives = 51/85 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P Y+P+SP
Sbjct: 1703 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PNYTPTSPK 1754
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPT 507
YSPTSP YSPTSP YSP SP YSPT
Sbjct: 1755 YSPTSPSYSPTSPSYSPASPSYSPT 1779
Score = 62.4 bits (150), Expect = 2e-08
Identities = 31/45 (68%), Positives = 35/45 (77%), Gaps = 3/45 (6%)
Frame = +1
Query: 388 FSPSSSPGYSPSSPGYSPTSPG---YSPTSPGYSPTSPGYSPTSP 513
+SP+S P YSP+SP YSPTSP YSPT+PGYSP SP YSP SP
Sbjct: 1878 YSPTS-PKYSPTSPTYSPTSPKGSTYSPTTPGYSPASPTYSPESP 1921
[97][TOP]
>UniRef100_O96452 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae
RepID=O96452_ANTLO
Length = 1553
Score = 159 bits (402), Expect = 1e-37
Identities = 92/176 (52%), Positives = 112/176 (63%), Gaps = 1/176 (0%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG NR TG L RCSFEETV+ILL+A+ +AE + RGVTENIMLGQLAPIGTG+ L
Sbjct: 1321 RHGANRAATGALKRCSFEETVEILLEASCFAERNYCRGVTENIMLGQLAPIGTGNTICIL 1380
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPA-RSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA 357
+ + L++ I + D L TP RSPVS Y S ++ SP++
Sbjct: 1381 DKKALRSVI--PVAKSFDFLGEVATPVIRSPVSDVRYG----------SSSVPFSPIAAH 1428
Query: 358 QFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
++ +SP +SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1429 GYAAGTTPSVYSP-TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1483
[98][TOP]
>UniRef100_Q7Q3C6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7Q3C6_ANOGA
Length = 1878
Score = 158 bits (399), Expect = 3e-37
Identities = 100/208 (48%), Positives = 121/208 (58%), Gaps = 33/208 (15%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L DAAA+AE D +RGV+ENI+LGQL +GTG +L L
Sbjct: 1406 RHGINRQDTGALMRCSFEETVDVLNDAAAHAEVDPMRGVSENIILGQLPRMGTGCFDLLL 1465
Query: 181 NDEMLKNAIELQLPSYM--DGLEFG--MTPARSP--VSGTPYHEGMM-----------SP 309
+ E K +E+ S + G+ FG TP+ +P S TP + G P
Sbjct: 1466 DAEKCKLGMEIPHTSILGGTGMFFGSAATPSMTPWQQSATPGYGGWSPSGPASGMTPGGP 1525
Query: 310 NYLLSPNMRLSPMSDAQFSPYVGGMA-----------FSPSSSPGYSPSSPGYSPTSPG- 453
++ S S MS + +SP G + SPS SP YSPSSP Y+P SPG
Sbjct: 1526 SFSPSAQSDASGMSPSSWSPIRGSPSSPGPSMSPYPPSSPSMSPSYSPSSPNYAPNSPGG 1585
Query: 454 ----YSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSPGYSP SP YSP S YSP
Sbjct: 1586 ASPSYSPTSPGYSPPSPQYSPGSSNYSP 1613
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/105 (46%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
P Y G +P+ + + SP+Y SP + P S + F+ G SPS
Sbjct: 1602 PQYSPGSS-NYSPSSPNIHSATQNYSPTSPSY--SPMSPMHPTSASNFAS-PGYSPTSPS 1657
Query: 400 ---SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP YSPSSP +SPTSP YSP+SP YSPTSP YSPTSP+YSP
Sbjct: 1658 YSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSP 1702
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/95 (49%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYH----EGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSP 420
+P+ SP+S P H SP Y SP + +SP FSP+S P YSP
Sbjct: 1629 SPSYSPMS--PMHPTSASNFASPGY--SPTSPSYSPTSPSYSP--SSPVFSPTS-PSYSP 1681
Query: 421 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SSP YSPTSP YSPTSP YSPTSP ++P +P+YSP
Sbjct: 1682 SSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSP 1716
Score = 78.2 bits (191), Expect = 3e-13
Identities = 42/80 (52%), Positives = 52/80 (65%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP+ + +SP ++SP+S +P YSPSSP YSPTSP YSP
Sbjct: 1676 SPSY--SPSSPSYSPTSPSYSPT--SPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPA 1731
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSP+SP YSPTSP+YSP
Sbjct: 1732 SPSYSPSSPKYSPTSPSYSP 1751
Score = 75.5 bits (184), Expect = 2e-12
Identities = 40/72 (55%), Positives = 48/72 (66%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSP 483
SP+Y SP + F+P ++SPSS P YSP+SP YSP SP YSP+SP YSP
Sbjct: 1690 SPSY--SPTSPSYSPTSPNFTPVTP--SYSPSS-PNYSPTSPHYSPASPSYSPSSPKYSP 1744
Query: 484 TSPGYSPTSPTY 519
TSP YSPTSP+Y
Sbjct: 1745 TSPSYSPTSPSY 1756
Score = 69.7 bits (169), Expect = 1e-10
Identities = 51/124 (41%), Positives = 63/124 (50%), Gaps = 33/124 (26%)
Frame = +1
Query: 253 TPARSPVS----GTPYHE------GMMSPNYLLSPNMRLSPMSDAQFSP-------YVGG 381
+P+ SP S G+P++ G SPNY SP S Q SP +G
Sbjct: 1746 SPSYSPTSPSYIGSPHYTPASPQYGQASPNY--SPTSPSYSPSSPQHSPGSSSNHYSIGS 1803
Query: 382 MAFSPSSSP------GYSPSSPGYSPTSP-------GYSPTSPGYSPTSPGYSPT---SP 513
++S + +P YSPSSP YSPTSP YSP+SP YSPT GYSP+ SP
Sbjct: 1804 SSYSQTPAPYSPNMSSYSPSSPKYSPTSPVYTSSSPTYSPSSPAYSPTPQGYSPSSPASP 1863
Query: 514 TYSP 525
TYSP
Sbjct: 1864 TYSP 1867
Score = 68.6 bits (166), Expect = 3e-10
Identities = 46/112 (41%), Positives = 60/112 (53%), Gaps = 21/112 (18%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SPN+ ++P+ S + + SP+ +SP+S P YSPSSP
Sbjct: 1690 SPSYSPTSPS---YSPTSPNFTPVTPSYSPSSPNYSPTSPH-----YSPAS-PSYSPSSP 1740
Query: 430 GYSPTSPGYSPTSPGY--------------------SPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y SPTSP YSP+SP +SP
Sbjct: 1741 KYSPTSPSYSPTSPSYIGSPHYTPASPQYGQASPNYSPTSPSYSPSSPQHSP 1792
Score = 66.6 bits (161), Expect = 1e-09
Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 9/98 (9%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S P H S N+ + S + A +SP + ++SPSS SP Y
Sbjct: 1780 SPSYSPSS--PQHSPGSSSNHYSIGSSSYS-QTPAPYSPNMS--SYSPSSPKYSPTSPVY 1834
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPG---YSPTSPTY 519
+ SSP YSP+SP YSPT GYSP+SP YSPTSP+Y
Sbjct: 1835 TSSSPTYSPSSPAYSPTPQGYSPSSPASPTYSPTSPSY 1872
Score = 63.9 bits (154), Expect = 6e-09
Identities = 43/115 (37%), Positives = 56/115 (48%), Gaps = 24/115 (20%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVG--GMAFSPSS---SPG-- 411
+P+ S T SP+Y+ SP+ + Q SP ++SPSS SPG
Sbjct: 1736 SPSSPKYSPTSPSYSPTSPSYIGSPHYTPASPQYGQASPNYSPTSPSYSPSSPQHSPGSS 1795
Query: 412 -----------------YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+ YSP+SP YSPTSP Y+ +SP YSP+SP YSP
Sbjct: 1796 SNHYSIGSSSYSQTPAPYSPNMSSYSPSSPKYSPTSPVYTSSSPTYSPSSPAYSP 1850
Score = 61.2 bits (147), Expect = 4e-08
Identities = 43/97 (44%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-----LSPNMRLSPMSDAQFSPYVGGMAFSP---SSSP 408
+P SP S + H + S +Y SPNM S ++SP SP SSSP
Sbjct: 1787 SPQHSPGSSSN-HYSIGSSSYSQTPAPYSPNMSSYSPSSPKYSPT------SPVYTSSSP 1839
Query: 409 GYSPSSPGYSPTSPGYSPTSPG---YSPTSPGYSPTS 510
YSPSSP YSPT GYSP+SP YSPTSP Y ++
Sbjct: 1840 TYSPSSPAYSPTPQGYSPSSPASPTYSPTSPSYDDSN 1876
Score = 60.8 bits (146), Expect = 5e-08
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Frame = +1
Query: 250 MTPARSP----VSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS--SSPG 411
+TP+ SP S T H SP+Y S + + SP S + +SP SPS SP
Sbjct: 1710 VTPSYSPSSPNYSPTSPHYSPASPSYSPS-SPKYSPTSPS-YSPT------SPSYIGSPH 1761
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTS 510
Y+P+SP Y SP YSPTSP YSP+SP +SP S
Sbjct: 1762 YTPASPQYGQASPNYSPTSPSYSPSSPQHSPGS 1794
[99][TOP]
>UniRef100_Q75A34 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Eremothecium
gossypii RepID=RPB1_ASHGO
Length = 1745
Score = 158 bits (399), Expect = 3e-37
Identities = 91/203 (44%), Positives = 118/203 (58%), Gaps = 28/203 (13%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG NR DTG LMRCSFEETV+IL +A A AE D GV+EN++LGQ+APIGTG ++ +
Sbjct: 1387 RHGFNRADTGALMRCSFEETVEILFEAGAAAELDDCSGVSENVILGQMAPIGTGSFDVMI 1446
Query: 181 NDE-MLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA 357
+DE ++K E +L + ++ + G TP S G+++ + + SP+ +A
Sbjct: 1447 DDESLIKYMPEQKLSTAVEVNDGGATPYNSDA-------GLVNTKVDIKDELMFSPLVEA 1499
Query: 358 ------------------------QFSPYVGG---MAFSPSSSPGYSPSSPGYSPTSPGY 456
FS Y G F SSPG+SP+SP YSPTSP Y
Sbjct: 1500 GTSDAIASGGFTAYGGADYGGATSPFSGYGNGPTSPGFGDVSSPGFSPTSPAYSPTSPSY 1559
Query: 457 SPTSPGYSPTSPGYSPTSPTYSP 525
SPTSP YSPTSP YSPTSP+YSP
Sbjct: 1560 SPTSPSYSPTSPSYSPTSPSYSP 1582
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1570 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1621
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1622 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1652
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1577 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1628
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1629 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1659
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1584 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1635
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1666
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1591 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1642
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1643 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1673
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1598 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1649
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1680
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1605 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1656
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1657 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1687
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1612 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1663
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1619 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1670
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1701
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1626 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1677
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1708
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1633 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1684
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1715
Score = 83.2 bits (204), Expect = 1e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1640 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1691
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1692 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSP 1722
Score = 80.9 bits (198), Expect = 5e-14
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1647 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1698
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP SP+YSP
Sbjct: 1699 YSPTSPSYSPTSPSYSPTSPQYSPRSPSYSP 1729
Score = 67.8 bits (164), Expect = 4e-10
Identities = 40/85 (47%), Positives = 51/85 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPT 507
YSPTSP YSPTSP YSP SP YSP+
Sbjct: 1706 YSPTSPSYSPTSPQYSPRSPSYSPS 1730
[100][TOP]
>UniRef100_A7AWJ0 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7AWJ0_BABBO
Length = 1746
Score = 157 bits (398), Expect = 3e-37
Identities = 97/243 (39%), Positives = 134/243 (55%), Gaps = 68/243 (27%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR D GPL++CSFEET++ L+DAA +AE D L+GVTEN+MLGQL P+GTG ++ +
Sbjct: 1404 RHGLNRADRGPLVKCSFEETLEALVDAAVFAELDLLKGVTENVMLGQLCPMGTGSFDIMI 1463
Query: 181 NDEMLKNA---IELQLPSYMDGLEF-------GMTPAR-----SPVSGTPYHEGMM---- 303
+DE L++A +++ S + G M+PA+ SP+ +P + +M
Sbjct: 1464 DDEKLRDANQNLQIMPDSALSGFTSPESTSPDSMSPAKINSMLSPLPFSPSYAALMMSPI 1523
Query: 304 ----SPNYLLSP---------------------------NMRLSPMSDAQFSPYVGGMA- 387
SP+++ SP + +P+S SP +G M+
Sbjct: 1524 VNVSSPSFVTSPAVDTKALGGSFSPTIMSPQSPVSPSYAPLSPNPLSPNPLSPSMGMMSP 1583
Query: 388 ----FSPSS-------------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT 516
+SP+S SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP
Sbjct: 1584 TSPVYSPTSPVYGQAGGVYSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPA 1643
Query: 517 YSP 525
YSP
Sbjct: 1644 YSP 1646
Score = 85.1 bits (209), Expect = 3e-15
Identities = 51/101 (50%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Frame = +1
Query: 235 GLEFGMTPARSPVSGTPYHEGMM----SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS 402
G+ +P SP S G + SP Y SP L + +SP A+SP+S
Sbjct: 1579 GMMSPTSPVYSPTSPVYGQAGGVYSPASPAY--SPTSPLYSPTSPVYSPT--SPAYSPTS 1634
Query: 403 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1635 -PAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1674
Score = 82.0 bits (201), Expect = 2e-14
Identities = 46/91 (50%), Positives = 53/91 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP + + P+S P Y P+SP
Sbjct: 1648 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPTSPNLGYLPTS-PAYRPTSPA 1701
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1702 YSPTSPAYSPTSPAYSPTSPVYSPTSPEYSP 1732
Score = 77.4 bits (189), Expect = 6e-13
Identities = 47/87 (54%), Positives = 54/87 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S P + SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1606 SPAYSPTS--PLYSPT-SPVY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1657
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSP 513
YSPTSP YSPTSP YSPTSP YSPTSP
Sbjct: 1658 YSPTSPAYSPTSPAYSPTSPAYSPTSP 1684
Score = 62.0 bits (149), Expect = 2e-08
Identities = 43/85 (50%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA SP S SP Y SPN+ P S A + P A+SP+S P YSP+SP
Sbjct: 1662 SPAYSPTSPA---YSPTSPAYSPTSPNLGYLPTSPA-YRPT--SPAYSPTS-PAYSPTSP 1714
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSP 504
YSPTSP YSPTSP YSP P +SP
Sbjct: 1715 AYSPTSPVYSPTSPEYSPEDP-FSP 1738
[101][TOP]
>UniRef100_Q8SSC4 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Encephalitozoon
cuniculi RepID=RPB1_ENCCU
Length = 1599
Score = 157 bits (398), Expect = 3e-37
Identities = 95/186 (51%), Positives = 118/186 (63%), Gaps = 11/186 (5%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+N+ G L R SFEETV+ILLDAA +E + RG+TENIM+GQLAP+GTG+ E+ L
Sbjct: 1349 RHGVNKVGAGALKRSSFEETVEILLDAALVSEKNICRGITENIMMGQLAPMGTGNIEIML 1408
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHE------GMMSPNYL-----LSP 327
+ + L AI L P + PA +PV TP + G SP +L
Sbjct: 1409 DMKKLDKAIPLSNPVFKPN-----EPA-TPVISTPSSDSFSISSGNWSPTHLEMAYSRDL 1462
Query: 328 NMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPT 507
RLSP S + +SP ++SP +SP YSP+SP YSPTSP YSPTSP YSPTSP YSPT
Sbjct: 1463 GERLSPTSPS-YSP--TSPSYSP-TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1518
Query: 508 SPTYSP 525
SP+YSP
Sbjct: 1519 SPSYSP 1524
[102][TOP]
>UniRef100_B3RM26 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3RM26_TRIAD
Length = 1784
Score = 157 bits (396), Expect = 6e-37
Identities = 105/245 (42%), Positives = 123/245 (50%), Gaps = 70/245 (28%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR + G LMRCSFEETVDIL+DAA ++ETD LRGV+ENIMLGQL+ IGTG +L L
Sbjct: 1395 RHGINRQEVGALMRCSFEETVDILMDAAFHSETDYLRGVSENIMLGQLSKIGTGCFDLLL 1454
Query: 181 NDEMLKNAIE------------------------------------LQLPS----YMDGL 240
+ E K+ +E L PS Y G+
Sbjct: 1455 DPEKCKDGMEIPANVPVAGMINGVGAGVFYGDGAGMSPQMTPWDSSLTTPSYEGPYTPGM 1514
Query: 241 EFGMTP-----ARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGG-------- 381
GMTP + S S + SPN+ SP SP S SPY+
Sbjct: 1515 GGGMTPGAAGFSPSGASEPSFSPASYSPNW--SPGPAASPGSPGPSSPYMQSPTDITFYV 1572
Query: 382 -----------------MAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTS 510
+SP +SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTS
Sbjct: 1573 AFQSIILTVESKLLTDFSKYSP-TSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTS 1631
Query: 511 PTYSP 525
P YSP
Sbjct: 1632 PRYSP 1636
Score = 83.2 bits (204), Expect = 1e-14
Identities = 48/81 (59%), Positives = 56/81 (69%), Gaps = 7/81 (8%)
Frame = +1
Query: 304 SPNYLLSPNM-RLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSP 462
SP+Y SP R SP S + +SP ++SP+S SP YSP+SP YSPTSP YSP
Sbjct: 1645 SPSY--SPTSPRYSPTSPS-YSPT--SPSYSPTSPKYSPTSPRYSPTSPSYSPTSPSYSP 1699
Query: 463 TSPGYSPTSPGYSPTSPTYSP 525
TSP YSPTSP YSPTSP+YSP
Sbjct: 1700 TSPSYSPTSPSYSPTSPSYSP 1720
Score = 83.2 bits (204), Expect = 1e-14
Identities = 51/92 (55%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNM-RLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP Y SP R SP S + +SP ++SP+S P YSP+SP
Sbjct: 1659 SPSYSPTSPS---YSPTSPKY--SPTSPRYSPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1709
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1710 SYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSP 1741
Score = 82.8 bits (203), Expect = 1e-14
Identities = 50/92 (54%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNM-RLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P S T SP+Y SP R SP S + +SP +SP+S P YSP+SP
Sbjct: 1593 SPTSPSYSPTSPRYSPTSPSY--SPTSPRYSPTSPS-YSPT--SPRYSPTS-PSYSPTSP 1646
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1647 SYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSP 1678
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 54/91 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T SP+Y SP + ++SP +SP+S P YSP+SP
Sbjct: 1642 SPTSPSYSPTSPRYSPTSPSY--SPTSPSYSPTSPKYSPT--SPRYSPTS-PSYSPTSPS 1696
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1697 YSPTSPSYSPTSPSYSPTSPSYSPTSPRYSP 1727
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/91 (51%), Positives = 59/91 (64%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + ++SP ++SP+S P YSP+SP
Sbjct: 1694 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPRYSPT--SPSYSPTS-PRYSPTSPS 1745
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1746 YSPTSPRYSPTSPSYSPTSPSYSPTSPSYSP 1776
Score = 82.8 bits (203), Expect = 1e-14
Identities = 51/92 (55%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNM-RLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SP R SP S + +SP +SP+S P YSP+SP
Sbjct: 1701 SPSYSPTSPS---YSPTSPSY--SPTSPRYSPTSPS-YSPT--SPRYSPTS-PSYSPTSP 1751
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1752 RYSPTSPSYSPTSPSYSPTSPSYSPTSPDYSP 1783
Score = 81.6 bits (200), Expect = 3e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP +SP+S P YSP+SP
Sbjct: 1687 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPRYSPTS-PSYSPTSPR 1738
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1739 YSPTSPSYSPTSPRYSPTSPSYSPTSPSYSP 1769
[103][TOP]
>UniRef100_C4VAM1 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4VAM1_NOSCE
Length = 1612
Score = 157 bits (396), Expect = 6e-37
Identities = 94/177 (53%), Positives = 112/177 (63%), Gaps = 2/177 (1%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+N+ G L R SFEETVDILLDAA AE + +G+TENIM+GQLAP+GTG ++ L
Sbjct: 1326 RHGVNKVGFGALKRASFEETVDILLDAAYAAENNVTKGITENIMMGQLAPLGTGIGDILL 1385
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTP-ARSPVS-GTPYHEGMMSPNYLLSPNMRLSPMSD 354
+ L+ AI L P Y E TP SPVS G SP Y L+ + SP
Sbjct: 1386 DVSKLEFAIPLSKPDY--NYEDVDTPFIYSPVSESQSISSGNWSPAY-LAEESKYSP--- 1439
Query: 355 AQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+ S + G S+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1440 -KLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1495
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1483 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1534
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1535 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1565
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1490 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1541
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1542 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1572
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1497 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1548
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1549 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1579
Score = 80.1 bits (196), Expect = 9e-14
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1504 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1555
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTS +YSP
Sbjct: 1556 YSPTSPSYSPTSPSYSPTSPSYSPTSLSYSP 1586
Score = 80.1 bits (196), Expect = 9e-14
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1511 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1562
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTS YSPTSP+YSP
Sbjct: 1563 YSPTSPSYSPTSPSYSPTSLSYSPTSPSYSP 1593
Score = 68.6 bits (166), Expect = 3e-10
Identities = 41/85 (48%), Positives = 51/85 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1518 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1569
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPT 507
YSPTSP YSPTS YSPTSP YSPT
Sbjct: 1570 YSPTSPSYSPTSLSYSPTSPSYSPT 1594
[104][TOP]
>UniRef100_C4JY44 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JY44_UNCRE
Length = 1747
Score = 157 bits (396), Expect = 6e-37
Identities = 100/241 (41%), Positives = 124/241 (51%), Gaps = 66/241 (27%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILLDAAA+AE D RGV+EN++LGQ+AP GTG+ ++YL
Sbjct: 1367 RHGINRADTGALMRCSFEETVEILLDAAAFAELDDCRGVSENLILGQMAPAGTGEFDVYL 1426
Query: 181 NDEMLKNAIE-----------------------------LQLPSYMDGLE-------FGM 252
+ ML + +Q Y+ + G
Sbjct: 1427 DQTMLMGVVSNNAGLVTMGNVDKGLISDGAATQYDSGSPMQENMYISSPDPDSQFSPIGQ 1486
Query: 253 TPARSPVSGTPYHE---GMMSPNYLLSPNMRLSPMSDAQFSP----YVGGMAFSPSS--- 402
T + +P T Y G SP SP SP S SP Y +SP+S
Sbjct: 1487 TGSETPAGFTEYQPPGFGGFSPAGARSPGGGYSPTSPFNTSPTSPGYSPSSGYSPTSPGM 1546
Query: 403 ---------SPGYSPSSPGYSPTSPGYSPTSPG-----------YSPTSPGYSPTSPTYS 522
SPG+SP+SP ++PTSP YSPTSPG YSPTSPG+SPTSP+YS
Sbjct: 1547 GITSPRFMTSPGFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYS 1606
Query: 523 P 525
P
Sbjct: 1607 P 1607
Score = 89.0 bits (219), Expect = 2e-16
Identities = 50/100 (50%), Positives = 61/100 (61%), Gaps = 9/100 (9%)
Frame = +1
Query: 253 TPARSPVSG---TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVG------GMAFSPSSS 405
+P SP SG T G+ SP ++ SP + S A SP G A SP+S
Sbjct: 1530 SPGYSPSSGYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPGYGQAQSPTS- 1588
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP
Sbjct: 1589 PSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSP 1628
Score = 68.6 bits (166), Expect = 3e-10
Identities = 48/105 (45%), Positives = 59/105 (56%), Gaps = 14/105 (13%)
Frame = +1
Query: 253 TPARSPVS-GTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
+PA SP S G + SP+Y SP + S + SP +FSP+S P +SP+S
Sbjct: 1570 SPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSP-----SFSPAS-PAFSPTS 1623
Query: 427 PGYSPTSPGY-----------SPTSPGYSPTSPGYSPTSP-TYSP 525
P YSPTSP SPTSP Y+PTSPG+SPTSP YSP
Sbjct: 1624 PSYSPTSPALGGVTGRHLSPTSPTSPKYTPTSPGWSPTSPDAYSP 1668
Score = 68.6 bits (166), Expect = 3e-10
Identities = 43/83 (51%), Positives = 53/83 (63%), Gaps = 15/83 (18%)
Frame = +1
Query: 322 SPNMRLSPMSDAQFSPYVGGMA---FSPSS--SPGYSPSSPGYSPTSP-GYSPTSPGY-- 477
SP + S + SP +GG+ SP+S SP Y+P+SPG+SPTSP YSPTSP +
Sbjct: 1616 SPAFSPTSPSYSPTSPALGGVTGRHLSPTSPTSPKYTPTSPGWSPTSPDAYSPTSPNFAG 1675
Query: 478 SPTSPG-------YSPTSPTYSP 525
SPTSPG YSPTSPTY+P
Sbjct: 1676 SPTSPGWSLLPPGYSPTSPTYNP 1698
[105][TOP]
>UniRef100_B4H2R8 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4H2R8_DROPE
Length = 1804
Score = 156 bits (395), Expect = 7e-37
Identities = 109/251 (43%), Positives = 127/251 (50%), Gaps = 76/251 (30%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 1408 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 1467
Query: 181 NDEMLKNAIEL--QLPSYM---------DGLEFGMTPARSPVSG---------TPYHEGM 300
+ E + IE+ L S M G MTP +PVS T G
Sbjct: 1468 DAEKCRFGIEIPNTLGSSMLGGTAMFIGGGSTPSMTPPMTPVSPSYSPTSPNYTASSPGG 1527
Query: 301 MSPNYLLS----------------------PNMR-------------------LSPMSDA 357
SPNY S PN SP S+
Sbjct: 1528 ASPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNF 1587
Query: 358 QFSP---------YVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSP 492
SP Y G A+SPSS SP YSP+SP YSP+SP YSPTSP YSPTSP
Sbjct: 1588 PSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSP 1647
Query: 493 GYSPTSPTYSP 525
YSPTSP Y+P
Sbjct: 1648 SYSPTSPNYTP 1658
Score = 71.2 bits (173), Expect = 4e-11
Identities = 49/104 (47%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVS-----GTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS----- 402
+P+ SP S TP + SPNY SP+ SP S A G +SP+S
Sbjct: 1646 SPSYSPTSPNYTPATPSYSPT-SPNYSASPHY--SPASPAYSQT---GAKYSPTSPTYSP 1699
Query: 403 -SPGY--SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP Y SP SP Y+P SP YSP SP YSPTSP YSP+SP +SP
Sbjct: 1700 PSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSP 1743
Score = 67.8 bits (164), Expect = 4e-10
Identities = 48/125 (38%), Positives = 59/125 (47%), Gaps = 23/125 (18%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMM----SPNYLLSPNMRLSPMSDAQFSPYVGGMA 387
P Y F +P+ + Y G S NY SPN + +SP +
Sbjct: 1579 PVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNY--SPNSPSYSPTSPSYSP--SSPS 1634
Query: 388 FSPSS------SPGYSPSSPGYSPTSPGYSPTSPG------YSPTSPG-------YSPTS 510
+SP+S SP YSP+SP Y+P +P YSPTSP YSP SP YSPTS
Sbjct: 1635 YSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTS 1694
Query: 511 PTYSP 525
PTYSP
Sbjct: 1695 PTYSP 1699
Score = 61.2 bits (147), Expect = 4e-08
Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLL-SPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA S T SP Y SP+ SP S Q++P G +SP+S P YSP+SP
Sbjct: 1677 SPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSP-QYTP--GSPQYSPAS-PKYSPTSP 1732
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP +SP++ YSPT YS TSP YSP
Sbjct: 1733 LYSPSSPQHSPSNQ-YSPTGSTYSATSPRYSP 1763
Score = 60.8 bits (146), Expect = 5e-08
Identities = 38/80 (47%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS------SSPGYSPSSPGYSPTSPGYSPT 465
SP Y SP L S Q SP +SP+ +SP YSP+ YSP+S YSPT
Sbjct: 1724 SPKY--SPTSPLYSPSSPQHSP---SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 1778
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP Y+PT+ YSPTS YSP
Sbjct: 1779 SPTYTPTARNYSPTSLMYSP 1798
[106][TOP]
>UniRef100_A7TTU2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Vanderwaltozyma
polyspora DSM 70294 RepID=A7TTU2_VANPO
Length = 1311
Score = 156 bits (395), Expect = 7e-37
Identities = 88/188 (46%), Positives = 122/188 (64%), Gaps = 13/188 (6%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG NR++TG LMRCSFEETV+IL +A A AE D RGV+EN++LGQ+AP+GTG ++ +
Sbjct: 1068 RHGFNRSNTGALMRCSFEETVEILFEAGASAELDDCRGVSENVILGQMAPVGTGAFDVMI 1127
Query: 181 NDE-MLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA 357
++E ++K E ++ DG E G+TP + G+++ + L + SP+ D+
Sbjct: 1128 DEESLIKYMPEQKITELEDGQEGGLTPYSN-------ESGLVNADIDLKDELMFSPLVDS 1180
Query: 358 --------QFSPYVG---GMAFSPSSSPGYSPSSPGY-SPTSPGYSPTSPGYSPTSPGYS 501
F+ Y G G A SP ++ G SPSSPG+ +SPG+SPTSP YSPTSP YS
Sbjct: 1181 GSTDAMAGGFTAYGGADYGGATSPFTAYGESPSSPGFGGVSSPGFSPTSPAYSPTSPSYS 1240
Query: 502 PTSPTYSP 525
PTSP+YSP
Sbjct: 1241 PTSPSYSP 1248
[107][TOP]
>UniRef100_A8PU11 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PU11_BRUMA
Length = 1943
Score = 156 bits (394), Expect = 1e-36
Identities = 103/241 (42%), Positives = 128/241 (53%), Gaps = 66/241 (27%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR + G LMRCSFEETVDIL++AA +AE D ++GV+ENIMLGQLA GTG +L L
Sbjct: 1480 RHGINRQEVGALMRCSFEETVDILMEAAVHAEQDPVKGVSENIMLGQLARAGTGCFDLVL 1539
Query: 181 NDEMLKNAIELQLPSYM---DGLEFG---------MTPARSP--VSGTPYHEGMMSP--- 309
+ + K A+E+Q + G+ FG M+PA++P TP + SP
Sbjct: 1540 DADKCKLAMEIQTGGGLLGTGGMYFGSSMSPASSAMSPAQTPWNAGTTPAYGAAWSPATG 1599
Query: 310 NYLLSPNMRLSPM--SDAQFSPYVGGMAFSPS---------------------------- 399
+ + SP S+ FSPY GG ++SP
Sbjct: 1600 SGMTPGGAGFSPSGHSEGGFSPYGGGGSWSPGSPGGSLGGMSPSGAGAYSPAASDYGSGL 1659
Query: 400 ---SSPGYSPSSPG----------------YSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
SSPGYSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YS
Sbjct: 1660 EGLSSPGYSPTSPASPYGASSPAYGVMSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1719
Query: 523 P 525
P
Sbjct: 1720 P 1720
Score = 97.4 bits (241), Expect = 5e-19
Identities = 65/133 (48%), Positives = 79/133 (59%), Gaps = 2/133 (1%)
Frame = +1
Query: 133 LGQLAPIGTGDCELYLNDEMLKNAIELQLPSYMDGLEFGMTPARSPVS-GTPYHEGMMSP 309
LG ++P G G +D Y GLE +P SP S +PY G SP
Sbjct: 1637 LGGMSPSGAGAYSPAASD-------------YGSGLEGLSSPGYSPTSPASPY--GASSP 1681
Query: 310 NY-LLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPT 486
Y ++SP R SP S + +SP ++SP+S P YSP+SP YSPTSP YSPTSPGYSPT
Sbjct: 1682 AYGVMSP--RYSPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPGYSPT 1735
Query: 487 SPGYSPTSPTYSP 525
SP YSPTSP+YSP
Sbjct: 1736 SPSYSPTSPSYSP 1748
Score = 87.0 bits (214), Expect = 7e-16
Identities = 50/91 (54%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP Y SP + +SP ++SP+S PGYSPSSP
Sbjct: 1715 SPSYSPTSPS---YSPTSPGY--SPTSPSYSPTSPSYSPT--SPSYSPAS-PGYSPSSPR 1766
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1767 YSPTSPAYSPTSPTYSPTSPAYSPTSPTYSP 1797
Score = 85.1 bits (209), Expect = 3e-15
Identities = 50/99 (50%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SP 408
G +P S T SP+Y SP S ++SP A+SP+S SP
Sbjct: 1731 GYSPTSPSYSPTSPSYSPTSPSY--SPASPGYSPSSPRYSPT--SPAYSPTSPTYSPTSP 1786
Query: 409 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSP YSP SPGYSP+SP YSPTSPTYSP
Sbjct: 1787 AYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPTSPTYSP 1825
Score = 82.4 bits (202), Expect = 2e-14
Identities = 50/102 (49%), Positives = 59/102 (57%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
PSY G +P+ S T SP Y SP + +SP ++SP+
Sbjct: 1751 PSYSPASP-GYSPSSPRYSPTSPAYSPTSPTY--SPTSPAYSPTSPTYSPT--SPSYSPA 1805
Query: 400 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
S PGYSPSSP YSPTSP YSPTSP YSP+SP YSP+SP YSP
Sbjct: 1806 S-PGYSPSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSP 1846
Score = 78.6 bits (192), Expect = 3e-13
Identities = 47/91 (51%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S T SP Y SP + +SP G +SPSS P YSP+SP
Sbjct: 1771 SPAYSPTSPT---YSPTSPAY--SPTSPTYSPTSPSYSPASPG--YSPSS-PRYSPTSPT 1822
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+SP YSP+SP YSP+SP Y+P
Sbjct: 1823 YSPTSPAYSPSSPQYSPSSPQYSPSSPQYTP 1853
Score = 74.3 bits (181), Expect = 5e-12
Identities = 47/97 (48%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA S + SP Y SP S Q+SP +SPSS P Y+PSSP
Sbjct: 1803 SPASPGYSPSSPRYSPTSPTY--SPTSPAYSPSSPQYSP--SSPQYSPSS-PQYTPSSPA 1857
Query: 433 ------YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+SP YSP+SP YSPTSP YSP
Sbjct: 1858 GDASPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSP 1894
Score = 72.8 bits (177), Expect = 1e-11
Identities = 47/103 (45%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
PSY G +P+ S T SP Y SP+ S Q+SP ++PS
Sbjct: 1800 PSYSPASP-GYSPSSPRYSPTSPTYSPTSPAY--SPSSPQYSPSSPQYSP--SSPQYTPS 1854
Query: 400 S-----SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP 513
S SP YSP+SP YSP+SP YSP+SP YSPTSP YSP+SP
Sbjct: 1855 SPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSP 1897
Score = 71.6 bits (174), Expect = 3e-11
Identities = 44/78 (56%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPG----YSPSSPGYSPTSPGYSPTSP 471
SP Y S + R SP S Q+SP +SPSS G YS SSP YSP+SP YSP+SP
Sbjct: 1868 SPQYSPS-SPRYSP-SSPQYSPT--SPQYSPSSPGGAGTSYSRSSPQYSPSSPQYSPSSP 1923
Query: 472 GYSPTSPGYSPTSPTYSP 525
YSP+SP YSP+SP YSP
Sbjct: 1924 QYSPSSPQYSPSSPQYSP 1941
[108][TOP]
>UniRef100_A1YIA7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pichia kudriavzevii
RepID=A1YIA7_ISSOR
Length = 1647
Score = 156 bits (394), Expect = 1e-36
Identities = 98/214 (45%), Positives = 119/214 (55%), Gaps = 39/214 (18%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG NRNDTG LMRCSFEETV+IL DA A AE D GV++NI+LGQ+AP GTG ++YL
Sbjct: 1311 RHGFNRNDTGALMRCSFEETVEILFDAGASAELDTCDGVSQNIILGQMAPFGTGSFDVYL 1370
Query: 181 NDEML-----KNAIE------------------------LQLPSYMDGLEFGMTPARSPV 273
+DE L +N ++ + +P D + F +P +
Sbjct: 1371 DDEKLAALPSENPVDVISTAKDTKGSMTVYGDDHFKDDIIDIPMAADNVAF--SPLITAG 1428
Query: 274 SG-------TPYHEGMMSPNYLLSP-NMRLSPMSDAQFSPYVG--GMAFSPSSSPGYSPS 423
SG T Y G MS SP + S SP G ++SP +SP YSP+
Sbjct: 1429 SGDDRSGGFTEYGSGNMSAYQPTSPFGYGATSPSYGPTSPSYGPTSPSYSP-TSPAYSPT 1487
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1488 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1521
Score = 84.7 bits (208), Expect = 4e-15
Identities = 49/91 (53%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1481 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPS 1532
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1533 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1563
Score = 84.0 bits (206), Expect = 6e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1488 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PSYSPTSPS 1539
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1540 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSP 1570
Score = 81.6 bits (200), Expect = 3e-14
Identities = 48/91 (52%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1502 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1553
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1554 YSPTSPSYSPTSPQYSPTSPQYSPTSPQYSP 1584
Score = 80.9 bits (198), Expect = 5e-14
Identities = 48/91 (52%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1516 SPAYSPTSPA---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPQ 1567
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1568 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1598
Score = 80.9 bits (198), Expect = 5e-14
Identities = 47/91 (51%), Positives = 54/91 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T SP Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1562 SPTSPQYSPTSPQYSPTSPQY--SPTSPQYSPTSPQYSPT--SPQYSPTS-PQYSPTSPQ 1616
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1617 YSPTSPQYSPTSPQYSPTSPQYSPTSPSYSP 1647
Score = 80.5 bits (197), Expect = 7e-14
Identities = 48/91 (52%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1509 SPAYSPTSPA---YSPTSPAY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1560
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1561 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1591
[109][TOP]
>UniRef100_UPI000179338A PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179338A
Length = 1862
Score = 155 bits (393), Expect = 1e-36
Identities = 108/270 (40%), Positives = 130/270 (48%), Gaps = 95/270 (35%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+LLDAAA+AE D +RGV+ENI++GQL +GTG +L L
Sbjct: 1411 RHGINRQDTGALMRCSFEETVDVLLDAAAHAEVDPMRGVSENIIMGQLPRMGTGCFDLLL 1470
Query: 181 NDEMLKNAIELQLP-------------------------------------SYMDGLEFG 249
+ E K+ IE+ + S+ LE G
Sbjct: 1471 DSEKAKDGIEIPMDNGYMGMGAGGMFMGAGTPSMSPAMTPWDQTSTPVYQNSWSSSLEAG 1530
Query: 250 MTP--------ARSPVSGT-------------PYHEGMMSPNYLLSPNMRLSPMSDAQFS 366
MTP S SGT P GM + Y+ SPN +SP + S
Sbjct: 1531 MTPGGPGFSPAGSSEASGTSPFWMTSGGTPGSPGSPGMATSPYVPSPN-SMSPNYNYPSS 1589
Query: 367 PYVGGMA-------FSPSS-------------------------SPGYSPSSP-----GY 435
P G M+ +SP+S SP YSP+SP Y
Sbjct: 1590 PQFGSMSPSMTPTNYSPTSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPTSPSYSHTSY 1649
Query: 436 SPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1650 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1679
Score = 92.8 bits (229), Expect = 1e-17
Identities = 53/110 (48%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
Frame = +1
Query: 223 SYMDGLEFG-MTPARSPVSGTPYHEGMMS-----PNYL-LSPNMRLSPMSDAQF--SPYV 375
+Y +FG M+P+ +P + +P + P Y +SPN SP S + SP
Sbjct: 1585 NYPSSPQFGSMSPSMTPTNYSPTSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPTSPSY 1644
Query: 376 GGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
++SP+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1645 SHTSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1693
Score = 86.3 bits (212), Expect = 1e-15
Identities = 45/91 (49%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + H + SP + +SP ++SP+S P YSP+SP
Sbjct: 1634 SPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1690
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1721
Score = 85.9 bits (211), Expect = 2e-15
Identities = 50/102 (49%), Positives = 61/102 (59%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
PSY +P+ SP S + SP+Y SP + +SP ++SP+
Sbjct: 1642 PSYSHTSYSPTSPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPT 1694
Query: 400 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1695 S-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1735
Score = 65.9 bits (159), Expect = 2e-09
Identities = 42/89 (47%), Positives = 50/89 (56%), Gaps = 15/89 (16%)
Frame = +1
Query: 301 MSPNY-----LLSPNMRLSPMSDAQFSPYVGGMAFSPS---SSPGYSPS-----SPGYSP 441
+SP Y + SP+ S Q +P G ++ S SSP YSP+ SP YSP
Sbjct: 1769 VSPTYSPTSPMYSPSNASYSPSSVQHTPNAGVTQYNQSYSPSSPVYSPTNFSLASPRYSP 1828
Query: 442 TSPGYSPT--SPGYSPTSPGYSPTSPTYS 522
TSP YSP SP YSP+SP YSPTSP YS
Sbjct: 1829 TSPTYSPGVGSPNYSPSSPSYSPTSPNYS 1857
Score = 63.2 bits (152), Expect = 1e-08
Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 19/110 (17%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1674 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1725
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPT-------------------SPTYSP 525
YSPTSP YSP+SP Y+ +SP Y+P+ SPTYSP
Sbjct: 1726 YSPTSPSYSPSSPQYTASSPSYTPSATSGASNYKYSPTSPSLAVSPTYSP 1775
Score = 62.4 bits (150), Expect = 2e-08
Identities = 47/112 (41%), Positives = 60/112 (53%), Gaps = 21/112 (18%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS---SSPGYSPS 423
+P+ SP S P + SP+Y S S S+ ++SP +A SP+ +SP YSPS
Sbjct: 1730 SPSYSPSS--PQYTAS-SPSYTPSAT---SGASNYKYSPTSPSLAVSPTYSPTSPMYSPS 1783
Query: 424 SPGYSPTS-------------PGYSPTSPGYSPT-----SPGYSPTSPTYSP 525
+ YSP+S YSP+SP YSPT SP YSPTSPTYSP
Sbjct: 1784 NASYSPSSVQHTPNAGVTQYNQSYSPSSPVYSPTNFSLASPRYSPTSPTYSP 1835
[110][TOP]
>UniRef100_UPI00016E658E UPI00016E658E related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E658E
Length = 1628
Score = 155 bits (393), Expect = 1e-36
Identities = 98/212 (46%), Positives = 125/212 (58%), Gaps = 37/212 (17%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTGPLM+CSFEETVD+L++A+++ E D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1414 RHGINRQDTGPLMKCSFEETVDVLMEASSHGECDPMKGVSENIMLGQLAPAGTGCFDLLL 1473
Query: 181 NDEMLKNAIEL--QLPSY----MDGLEFGMTPARSPVSG-----TPYHEGMMSPNYLLSP 327
+ E K +E+ +P G+ FG P SP+SG TP++ G SP
Sbjct: 1474 DAEKCKYGMEIPTNIPGISVAGSTGMFFGSAP--SPMSGMSPAMTPWNTGATPAYGAWSP 1531
Query: 328 NM--RLSPMSDAQFSPYVGGMA--FSPSSSPGYSPS---------------------SPG 432
++ ++P A FSP A FSP SP +SP+ SP
Sbjct: 1532 SVGSGMTP-GAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPASPYIPSPGGAMSPN 1590
Query: 433 YSPTSPGYSPTSP-GYSPTSPGYSPTSPTYSP 525
YSPTSP Y P SP GY+P SPGYSPTSP+YSP
Sbjct: 1591 YSPTSPAYEPRSPGGYTPQSPGYSPTSPSYSP 1622
[111][TOP]
>UniRef100_C1H3Q4 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1H3Q4_PARBA
Length = 1748
Score = 155 bits (392), Expect = 2e-36
Identities = 101/245 (41%), Positives = 122/245 (49%), Gaps = 70/245 (28%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILLDAAA+AE D RGV+EN++LGQ+AP GTG+ ++YL
Sbjct: 1420 RHGINRADTGALMRCSFEETVEILLDAAAFAELDDCRGVSENLILGQMAPAGTGEFDVYL 1479
Query: 181 NDEMLKNAIELQL----------------------PSYMDGLEFG-------MTPARSPV 273
+ ML + D + G +P R
Sbjct: 1480 DQNMLMGVVSSNAGLMTADGKGLLGDGAATPYDSNSPLQDNMYIGTPDPDSAFSPIRQAG 1539
Query: 274 SGTPY---------HEGMMSPNYLLSPNMRLSPMSDAQFSP------------------- 369
S TP G SP+ SP SP S SP
Sbjct: 1540 SETPAGFTEYQAPGFSGGFSPHGARSPGGGYSPSSPFNTSPTSPRYSPSSGYSPTSPGMS 1599
Query: 370 -----YVGGMAFSPSS------SPGYSPSSPGY--SPTSPGYSPTSPGYSPTSPGYSPTS 510
++ FSP+S SP YSP+SPGY SPTSP YSPTSPG+SPTSP YSPTS
Sbjct: 1600 ITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPNYSPTS 1659
Query: 511 PTYSP 525
P++SP
Sbjct: 1660 PSFSP 1664
Score = 72.8 bits (177), Expect = 1e-11
Identities = 56/127 (44%), Positives = 66/127 (51%), Gaps = 36/127 (28%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL--------LSPNMR-----LSPMSDA---------QFS 366
+PA SP S Y + SP+Y SPN SP S A S
Sbjct: 1622 SPAYSPTS-PGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1680
Query: 367 PYVGGMA---FSPSS--SPGYSPSSPGYSPTSPG-YSPTSPGYS--------PTSPGYSP 504
P +GG SP+S SP Y+P+SPG+SPTSP YSPTSP +S PTSPGYSP
Sbjct: 1681 PALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSP 1740
Query: 505 TSPTYSP 525
TSPT+SP
Sbjct: 1741 TSPTFSP 1747
Score = 69.7 bits (169), Expect = 1e-10
Identities = 46/112 (41%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +PA + T SP Y SP + FSP +SP+S P +SP+S
Sbjct: 1610 GFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPN--YSPTS-PSFSPAS 1666
Query: 427 PGYSPTSPGYSPTSPG------------------YSPTSPGYSPTSP-TYSP 525
P +SPTSP YSPTSP Y+PTSPG+SPTSP TYSP
Sbjct: 1667 PAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1718
Score = 60.1 bits (144), Expect = 9e-08
Identities = 41/89 (46%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA--QFSPYVGGMAFSPSSSPGYSPSS 426
+PA S T SP S LSP S +++P G +SP+S YSP+S
Sbjct: 1663 SPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPG--WSPTSPETYSPTS 1720
Query: 427 PGYS--PTSPGYSPTSPGYSPTSPGYSPT 507
P +S PTSPG PTSPGYSPTSP +SPT
Sbjct: 1721 PNFSGSPTSPG-GPTSPGYSPTSPTFSPT 1748
[112][TOP]
>UniRef100_C1GHL1 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb18 RepID=C1GHL1_PARBD
Length = 1746
Score = 155 bits (392), Expect = 2e-36
Identities = 100/238 (42%), Positives = 122/238 (51%), Gaps = 63/238 (26%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILLDAAA+AE D RGV+EN++LGQ+AP GTG+ ++YL
Sbjct: 1415 RHGINRADTGALMRCSFEETVEILLDAAAFAELDDCRGVSENLILGQMAPAGTGEFDVYL 1474
Query: 181 NDEMLKNAIELQL----------------------PSYMDGLEFG-------MTPARSPV 273
+ ML + D + G +P R
Sbjct: 1475 DQNMLMGVVSSNAGLMTADGKGLLGDGAATPYDSNSPLQDNMYIGTPDPDSAFSPIRQAG 1534
Query: 274 SGTPY---------HEGMMSPNYLLSPNMRLSPMSDAQFSP----YVGGMAFSPS----- 399
S TP G SP+ SP SP S SP Y +SP+
Sbjct: 1535 SETPAGFTEYQAPGFSGGFSPHGARSPGGGYSPSSPFNTSPTSPRYSPSSGYSPTSPGMS 1594
Query: 400 -------SSPGYSPSSPGYSPTSPGYSPTSPG---------YSPTSPGYSPTSPTYSP 525
SSPG+SP+SP ++PTSP YSPTSPG YSPTSPG+SPTSP+YSP
Sbjct: 1595 ITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSP 1652
Score = 71.2 bits (173), Expect = 4e-11
Identities = 43/82 (52%), Positives = 52/82 (63%), Gaps = 14/82 (17%)
Frame = +1
Query: 322 SPNMRLSPMSDAQFSPYVGGMA---FSPSS--SPGYSPSSPGYSPTSPG-YSPTSPGYS- 480
SP + S + SP +GG SP+S SP Y+P+SPG+SPTSP YSPTSP +S
Sbjct: 1661 SPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSG 1720
Query: 481 -------PTSPGYSPTSPTYSP 525
PTSPGYSPTSPT+SP
Sbjct: 1721 SPTSPGGPTSPGYSPTSPTFSP 1742
Score = 70.9 bits (172), Expect = 5e-11
Identities = 46/112 (41%), Positives = 57/112 (50%), Gaps = 19/112 (16%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +PA + T SP Y SP + FSP ++SP+S P +SP+S
Sbjct: 1605 GFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPT--SPSYSPTS-PSFSPAS 1661
Query: 427 PGYSPTSPGYSPTSPG------------------YSPTSPGYSPTSP-TYSP 525
P +SPTSP YSPTSP Y+PTSPG+SPTSP TYSP
Sbjct: 1662 PAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1713
Score = 64.3 bits (155), Expect = 5e-09
Identities = 43/91 (47%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA--QFSPYVGGMAFSPSSSPGYSPSS 426
+PA S T SP S LSP S +++P G +SP+S YSP+S
Sbjct: 1658 SPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPG--WSPTSPETYSPTS 1715
Query: 427 PGYS--PTSPGYSPTSPGYSPTSPGYSPTSP 513
P +S PTSPG PTSPGYSPTSP +SPTSP
Sbjct: 1716 PNFSGSPTSPG-GPTSPGYSPTSPTFSPTSP 1745
[113][TOP]
>UniRef100_C0SE75 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0SE75_PARBP
Length = 2106
Score = 155 bits (392), Expect = 2e-36
Identities = 100/238 (42%), Positives = 122/238 (51%), Gaps = 63/238 (26%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILLDAAA+AE D RGV+EN++LGQ+AP GTG+ ++YL
Sbjct: 1415 RHGINRADTGALMRCSFEETVEILLDAAAFAELDDCRGVSENLILGQMAPAGTGEFDVYL 1474
Query: 181 NDEMLKNAIELQL----------------------PSYMDGLEFG-------MTPARSPV 273
+ ML + D + G +P R
Sbjct: 1475 DQNMLMGVVSSNAGLMTADGKGLLGDGAATPYDSNSPLQDNMYIGTPDPDSAFSPIRQAG 1534
Query: 274 SGTPY---------HEGMMSPNYLLSPNMRLSPMSDAQFSP----YVGGMAFSPS----- 399
S TP G SP+ SP SP S SP Y +SP+
Sbjct: 1535 SETPAGFTEYQAPGFSGGFSPHGARSPGGGYSPSSPFNTSPTSPRYSPSSGYSPTSPGMS 1594
Query: 400 -------SSPGYSPSSPGYSPTSPGYSPTSPG---------YSPTSPGYSPTSPTYSP 525
SSPG+SP+SP ++PTSP YSPTSPG YSPTSPG+SPTSP+YSP
Sbjct: 1595 ITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSP 1652
Score = 71.2 bits (173), Expect = 4e-11
Identities = 43/82 (52%), Positives = 52/82 (63%), Gaps = 14/82 (17%)
Frame = +1
Query: 322 SPNMRLSPMSDAQFSPYVGGMA---FSPSS--SPGYSPSSPGYSPTSPG-YSPTSPGYS- 480
SP + S + SP +GG SP+S SP Y+P+SPG+SPTSP YSPTSP +S
Sbjct: 1661 SPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSG 1720
Query: 481 -------PTSPGYSPTSPTYSP 525
PTSPGYSPTSPT+SP
Sbjct: 1721 SPTSPGGPTSPGYSPTSPTFSP 1742
Score = 70.9 bits (172), Expect = 5e-11
Identities = 46/112 (41%), Positives = 57/112 (50%), Gaps = 19/112 (16%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +PA + T SP Y SP + FSP ++SP+S P +SP+S
Sbjct: 1605 GFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPT--SPSYSPTS-PSFSPAS 1661
Query: 427 PGYSPTSPGYSPTSPG------------------YSPTSPGYSPTSP-TYSP 525
P +SPTSP YSPTSP Y+PTSPG+SPTSP TYSP
Sbjct: 1662 PAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1713
Score = 60.1 bits (144), Expect = 9e-08
Identities = 41/89 (46%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA--QFSPYVGGMAFSPSSSPGYSPSS 426
+PA S T SP S LSP S +++P G +SP+S YSP+S
Sbjct: 1658 SPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPG--WSPTSPETYSPTS 1715
Query: 427 PGYS--PTSPGYSPTSPGYSPTSPGYSPT 507
P +S PTSPG PTSPGYSPTSP +SPT
Sbjct: 1716 PNFSGSPTSPG-GPTSPGYSPTSPTFSPT 1743
[114][TOP]
>UniRef100_P35074 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
briggsae RepID=RPB1_CAEBR
Length = 1853
Score = 155 bits (392), Expect = 2e-36
Identities = 100/224 (44%), Positives = 125/224 (55%), Gaps = 49/224 (21%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR + G LMRCSFEETVDIL++A+ +AE D ++GV+ENIMLGQLA GTG +L L
Sbjct: 1409 RHGINRQEVGALMRCSFEETVDILMEASVHAEVDPVKGVSENIMLGQLARCGTGCFDLVL 1468
Query: 181 NDEMLKNAIELQLPSYMDGLEFG----------MTPARSPVSG--TPYHEGMMSPNYLLS 324
+ E K+ +E+ M +G +PA SP + TP + G SP +S
Sbjct: 1469 DVEKCKHGMEIPQNVVMGAGIYGGGFAGSPSREFSPAHSPWNSGVTPNYSGPWSPTGGMS 1528
Query: 325 PNMRLSPMS--DAQFSPY-----------------------VGGMA---FSPSS------ 402
P+ SP D SP+ GGM+ +SP+S
Sbjct: 1529 PSAGFSPAGNLDGGASPFNEGGWSPASPGDPLGALSPRTPAYGGMSPGVYSPASPGFSMT 1588
Query: 403 SPGYSPSSPGYSPTSP---GYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSP+SP YSPTSP G SP SP YSPTSP YSPTSP+YSP
Sbjct: 1589 SPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSP 1632
Score = 88.6 bits (218), Expect = 2e-16
Identities = 48/91 (52%), Positives = 61/91 (67%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + + +SP+Y SP S + +SP ++SP+S P YSP+SP
Sbjct: 1596 SPSYSPTSPAHHGQSPVSPSY--------SPTSPS-YSPT--SPSYSPTS-PSYSPTSPS 1643
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1644 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1674
Score = 84.0 bits (206), Expect = 6e-15
Identities = 51/102 (50%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVG--GMAFSPSS----- 402
G +P S T SP+Y SP+ + S + SP ++SP+S
Sbjct: 1608 GQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1667
Query: 403 -SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPSSP YSPTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1668 TSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSP 1709
Score = 82.0 bits (201), Expect = 2e-14
Identities = 47/91 (51%), Positives = 52/91 (57%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S T SP Y SP + +SP SSP YSPSSP
Sbjct: 1676 SPRYSPTSPT---YSPTSPTY--SPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPT 1730
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SPTY+P
Sbjct: 1731 YSPTSPSYSPTSPQYSPTSPQYSPSSPTYTP 1761
Score = 78.6 bits (192), Expect = 3e-13
Identities = 47/92 (51%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P SP S T SP Y SP + S +SP +SPSS P YSP+SP
Sbjct: 1683 SPTYSPTSPT---YSPTSPTYSPTSPTYSPTSPSYEGYSP--SSPKYSPSS-PTYSPTSP 1736
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+SP Y+P+SPTY+P
Sbjct: 1737 SYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNP 1768
Score = 77.0 bits (188), Expect = 7e-13
Identities = 46/89 (51%), Positives = 56/89 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SPSS P YSP+SP
Sbjct: 1634 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPSS-PRYSPTSPT 1685
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTY 519
YSPTSP YSPTSP YSPTSP YSPTSP+Y
Sbjct: 1686 YSPTSPTYSPTSPTYSPTSPTYSPTSPSY 1714
Score = 75.1 bits (183), Expect = 3e-12
Identities = 51/110 (46%), Positives = 60/110 (54%), Gaps = 19/110 (17%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMM--SPNY-----LLSPNMRLSPMSDAQFSPYVGGMAFSPSS--- 402
+P SP S P +EG SP Y SP + Q+SP +SPSS
Sbjct: 1704 SPTYSPTS--PSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPT--SPQYSPSSPTY 1759
Query: 403 ---SPGYSP------SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP Y+P SSP YSPTSP YSPTSP Y+P+SP YSPTSPTY+P
Sbjct: 1760 TPSSPTYNPTSPRAFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTP 1809
Score = 68.2 bits (165), Expect = 3e-10
Identities = 44/106 (41%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ S T SP Y SP S + SP + SSP YSP+SP
Sbjct: 1725 SPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSSPQYSPTSP 1784
Query: 430 GYSPTSPGYSPTSPGYSPTSP--------------GYSPTSPTYSP 525
YSPTSP Y+P+SP YSPTSP YSP+SPTYSP
Sbjct: 1785 TYSPTSPSYTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSP 1830
Score = 67.8 bits (164), Expect = 4e-10
Identities = 39/92 (42%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNY-LLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P +P S + SP SP S Q+SP SP+ PG +S
Sbjct: 1763 SPTYNPTSPRAFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPADQPG---TSN 1819
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSP+SP YSP SP YSP+SPTY P
Sbjct: 1820 QYSPSSPTYSPSSPTYSPASPSYSPSSPTYDP 1851
[115][TOP]
>UniRef100_C6HNU4 DNA-directed RNA polymerase II n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HNU4_AJECH
Length = 668
Score = 155 bits (391), Expect = 2e-36
Identities = 99/238 (41%), Positives = 122/238 (51%), Gaps = 63/238 (26%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILLDAAA+AE D RGV+EN++LGQ+AP GTG+ ++YL
Sbjct: 336 RHGINRADTGALMRCSFEETVEILLDAAAFAELDDCRGVSENLILGQMAPAGTGEFDVYL 395
Query: 181 NDEMLKNAIELQL----------------------PSYMDGLEFG-------MTPARSPV 273
+ +ML + D + G +P R
Sbjct: 396 DQDMLMGVVSSNAGLMAADGKGLLSDGAATPYDSSSPLQDNMYIGTPDPDSNFSPIRQAG 455
Query: 274 SGTPY---------HEGMMSPNYLLSPNMRLSPMSDAQFSP----YVGGMAFSPS----- 399
S TP G SP+ SP SP S SP Y +SP+
Sbjct: 456 SETPAGFTEYQPSGFSGGFSPHGARSPGGGYSPSSPFNTSPTSPRYSPSSGYSPTSPGMS 515
Query: 400 -------SSPGYSPSSPGYSPTSPGY---------SPTSPGYSPTSPGYSPTSPTYSP 525
SSPG+SP+SP ++PTSP Y SPTSP YSPTSPG+SPTSP+YSP
Sbjct: 516 ITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPSYSP 573
Score = 70.5 bits (171), Expect = 7e-11
Identities = 51/129 (39%), Positives = 63/129 (48%), Gaps = 38/129 (29%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-----LSPNMRLSPMSDAQFSPYVGGMAFSPSS----- 402
+PA SP S + Y + SP+Y SP + FSP AFSP+S
Sbjct: 538 SPAYSPTSPS-YQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSP--ASPAFSPTSPSYSP 594
Query: 403 -------------------SPGYSPSSPGYSPTSPG-YSPTSPGYS--------PTSPGY 498
SP Y+P+SPG+SPTSP YSPTSP +S PTSPGY
Sbjct: 595 TSPALGVSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGY 654
Query: 499 SPTSPTYSP 525
SPTSPT++P
Sbjct: 655 SPTSPTFNP 663
Score = 62.8 bits (151), Expect = 1e-08
Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA--QFSPYVGGMAFSPSSSPGYSPSS 426
+PA S T SP +S LSP S +++P G +SP+S YSP+S
Sbjct: 579 SPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPG--WSPTSPETYSPTS 636
Query: 427 PGYS--PTSPGYSPTSPGYSPTSPGYSPTSP 513
P +S PTSPG PTSPGYSPTSP ++P SP
Sbjct: 637 PNFSGSPTSPG-GPTSPGYSPTSPTFNPISP 666
[116][TOP]
>UniRef100_C4R4Y0 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R4Y0_PICPG
Length = 1743
Score = 155 bits (391), Expect = 2e-36
Identities = 94/210 (44%), Positives = 118/210 (56%), Gaps = 35/210 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+IL +A A AE D RGV+EN+MLGQLAP+GTG ++ +
Sbjct: 1389 RHGINRADTGALMRCSFEETVEILFEAGAAAELDDCRGVSENVMLGQLAPMGTGAFDVMI 1448
Query: 181 NDEMLKNAIELQLP---------------------------SYMDGLEFGMTPARSPVSG 279
++++L + P ++ D + +P SG
Sbjct: 1449 DEKLLTSLPADYAPTMPLFKGKATQGSATPYDNNAQYDDEFNHDDVADVMFSPMAETGSG 1508
Query: 280 TPYHEGMMSPNYLLSPNMRLSPMSDAQ---FSPYVGGMA-----FSPSSSPGYSPSSPGY 435
G+ + SP SP A F+P G A +SP +SPGYSP+SP Y
Sbjct: 1509 DDRSGGLTEYAGIQSPYQPTSPGLSATSPGFAPTSPGFAPTSPRYSP-TSPGYSPTSPSY 1567
Query: 436 SPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1568 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1597
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/93 (50%), Positives = 54/93 (58%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G P S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1545 GFAPTSPRYSPTSPGYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1599
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1600 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSP 1632
Score = 83.2 bits (204), Expect = 1e-14
Identities = 47/93 (50%), Positives = 55/93 (59%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1559 GYSPTSPSYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1613
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1614 PSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSP 1646
Score = 80.5 bits (197), Expect = 7e-14
Identities = 48/91 (52%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1599 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPQYSPT--SPQYSPTS-PQYSPTSPQ 1650
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1651 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1681
Score = 80.5 bits (197), Expect = 7e-14
Identities = 48/91 (52%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1606 SPSYSPTSPS---YSPTSPSY--SPTSPQYSPTSPQYSPT--SPQYSPTS-PQYSPTSPQ 1657
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1658 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1688
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1578 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPQ 1629
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1630 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1660
Score = 80.1 bits (196), Expect = 9e-14
Identities = 48/91 (52%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1613 SPSYSPTSPS---YSPTSPQY--SPTSPQYSPTSPQYSPT--SPQYSPTS-PQYSPTSPQ 1664
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1665 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1695
Score = 80.1 bits (196), Expect = 9e-14
Identities = 49/91 (53%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S P + SP Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1620 SPSYSPTS--PQYSPT-SPQY--SPTSPQYSPTSPQYSPT--SPQYSPTS-PQYSPTSPQ 1671
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1672 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1702
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/91 (51%), Positives = 53/91 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T SP Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1624 SPTSPQYSPTSPQYSPTSPQY--SPTSPQYSPTSPQYSPT--SPQYSPTS-PQYSPTSPQ 1678
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1679 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1709
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/91 (51%), Positives = 53/91 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T SP Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1631 SPTSPQYSPTSPQYSPTSPQY--SPTSPQYSPTSPQYSPT--SPQYSPTS-PQYSPTSPQ 1685
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1686 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1716
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/91 (51%), Positives = 53/91 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T SP Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1638 SPTSPQYSPTSPQYSPTSPQY--SPTSPQYSPTSPQYSPT--SPQYSPTS-PQYSPTSPQ 1692
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1693 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1723
Score = 79.3 bits (194), Expect = 1e-13
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1585 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PQYSPTSPQ 1636
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1637 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1667
Score = 78.2 bits (191), Expect = 3e-13
Identities = 46/91 (50%), Positives = 52/91 (57%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T SP Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1645 SPTSPQYSPTSPQYSPTSPQY--SPTSPQYSPTSPQYSPT--SPQYSPTS-PQYSPTSPQ 1699
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP SP YSP
Sbjct: 1700 YSPTSPQYSPTSPQYSPTSPQYSPASPQYSP 1730
Score = 65.9 bits (159), Expect = 2e-09
Identities = 40/85 (47%), Positives = 47/85 (55%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T SP Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1652 SPTSPQYSPTSPQYSPTSPQY--SPTSPQYSPTSPQYSPT--SPQYSPTS-PQYSPTSPQ 1706
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPT 507
YSPTSP YSPTSP YSP SP YSP+
Sbjct: 1707 YSPTSPQYSPTSPQYSPASPQYSPS 1731
[117][TOP]
>UniRef100_C0NEY2 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0NEY2_AJECG
Length = 1234
Score = 155 bits (391), Expect = 2e-36
Identities = 99/238 (41%), Positives = 122/238 (51%), Gaps = 63/238 (26%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILLDAAA+AE D RGV+EN++LGQ+AP GTG+ ++YL
Sbjct: 902 RHGINRADTGALMRCSFEETVEILLDAAAFAELDDCRGVSENLILGQMAPAGTGEFDVYL 961
Query: 181 NDEMLKNAIELQL----------------------PSYMDGLEFG-------MTPARSPV 273
+ +ML + D + G +P R
Sbjct: 962 DQDMLMGVVSSNAGLMAADGKGLLSDGAATPYDSSSPLQDNMYIGTPDPDSNFSPIRQAG 1021
Query: 274 SGTPY---------HEGMMSPNYLLSPNMRLSPMSDAQFSP----YVGGMAFSPS----- 399
S TP G SP+ SP SP S SP Y +SP+
Sbjct: 1022 SETPAGFTEYQPSGFSGGFSPHGARSPGGGYSPSSPFNTSPTSPRYSPSSGYSPTSPGMS 1081
Query: 400 -------SSPGYSPSSPGYSPTSPGY---------SPTSPGYSPTSPGYSPTSPTYSP 525
SSPG+SP+SP ++PTSP Y SPTSP YSPTSPG+SPTSP+YSP
Sbjct: 1082 ITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPSYSP 1139
Score = 70.5 bits (171), Expect = 7e-11
Identities = 51/129 (39%), Positives = 63/129 (48%), Gaps = 38/129 (29%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-----LSPNMRLSPMSDAQFSPYVGGMAFSPSS----- 402
+PA SP S + Y + SP+Y SP + FSP AFSP+S
Sbjct: 1104 SPAYSPTSPS-YQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSP--ASPAFSPTSPSYSP 1160
Query: 403 -------------------SPGYSPSSPGYSPTSPG-YSPTSPGYS--------PTSPGY 498
SP Y+P+SPG+SPTSP YSPTSP +S PTSPGY
Sbjct: 1161 TSPALGVSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGY 1220
Query: 499 SPTSPTYSP 525
SPTSPT++P
Sbjct: 1221 SPTSPTFNP 1229
Score = 62.8 bits (151), Expect = 1e-08
Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA--QFSPYVGGMAFSPSSSPGYSPSS 426
+PA S T SP +S LSP S +++P G +SP+S YSP+S
Sbjct: 1145 SPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPG--WSPTSPETYSPTS 1202
Query: 427 PGYS--PTSPGYSPTSPGYSPTSPGYSPTSP 513
P +S PTSPG PTSPGYSPTSP ++P SP
Sbjct: 1203 PNFSGSPTSPG-GPTSPGYSPTSPTFNPISP 1232
[118][TOP]
>UniRef100_B2W4S0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2W4S0_PYRTR
Length = 1742
Score = 155 bits (391), Expect = 2e-36
Identities = 105/228 (46%), Positives = 124/228 (54%), Gaps = 53/228 (23%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRNDTG LMRCSFEETV+ILL+AA + E D RGV+ENIMLGQLAP+GTG+ ++ +
Sbjct: 1406 RHGINRNDTGALMRCSFEETVEILLEAAGFGELDDCRGVSENIMLGQLAPMGTGEFDVVM 1465
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNM-------RL 339
++ ML +E S M G G S + TPY G SP Y M
Sbjct: 1466 DNGMLLTMVEDN--SKMMGGAAGAGTYLSDGAATPYDLG--SPTYEGGMGMGGGYDQVSF 1521
Query: 340 SPMSDA-------------------QFSPYVGGMA------------FSPSSSPGYSPSS 426
SPM+ A FSPY GG + F+ SPG+SP+S
Sbjct: 1522 SPMAAAGGGDDQGGFTAYGGSYGSGGFSPYDGGRSPGGSGFTGMSPGFTSPVSPGFSPTS 1581
Query: 427 PGYSPTSPG--------------YSPTSPGYSPTSPGY-SPTSPTYSP 525
PGYSPTSPG SPTSP YSPTSP Y SPTSP+YSP
Sbjct: 1582 PGYSPTSPGTASPRFAATSPGYMASPTSPHYSPTSPRYGSPTSPSYSP 1629
Score = 75.9 bits (185), Expect = 2e-12
Identities = 51/117 (43%), Positives = 57/117 (48%), Gaps = 23/117 (19%)
Frame = +1
Query: 244 FGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMA-----FSPSS-- 402
F T S T H SP Y + SP S A +SP + +SP+S
Sbjct: 1596 FAATSPGYMASPTSPHYSPTSPRYGSPTSPSYSPTSPAGYSPTSPQYSPTSPNYSPTSPT 1655
Query: 403 ------SPGYSPSSPGYSPTSPGYSPTSPGY----------SPTSPGYSPTSPTYSP 525
SP YSP+SP YSPTSP YSPTSP Y SPTSP YSPTSP YSP
Sbjct: 1656 FMGGATSPAYSPTSPQYSPTSPQYSPTSPQYQATSDRRSPTSPTSPQYSPTSPRYSP 1712
Score = 65.9 bits (159), Expect = 2e-09
Identities = 47/116 (40%), Positives = 57/116 (49%), Gaps = 14/116 (12%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
PSY G +P S T + SP ++ + Q+SP +SP+
Sbjct: 1625 PSYSPTSPAGYSPTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQYSPT--SPQYSPT 1682
Query: 400 SSPGY----------SPSSPGYSPTSPGYSPTSP--GYSPTSPGYSPTS--PTYSP 525
S P Y SP+SP YSPTSP YSPTSP +SPTSP YSPTS P YSP
Sbjct: 1683 S-PQYQATSDRRSPTSPTSPQYSPTSPRYSPTSPAGSFSPTSPRYSPTSPGPAYSP 1737
[119][TOP]
>UniRef100_A6QYA7 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6QYA7_AJECN
Length = 1747
Score = 155 bits (391), Expect = 2e-36
Identities = 99/238 (41%), Positives = 122/238 (51%), Gaps = 63/238 (26%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILLDAAA+AE D RGV+EN++LGQ+AP GTG+ ++YL
Sbjct: 1415 RHGINRADTGALMRCSFEETVEILLDAAAFAELDDCRGVSENLILGQMAPAGTGEFDVYL 1474
Query: 181 NDEMLKNAIELQL----------------------PSYMDGLEFG-------MTPARSPV 273
+ +ML + D + G +P R
Sbjct: 1475 DQDMLMGVVSSNAGLMAADGKGLLSDGAATPYDSSSPLQDNMYIGTPDPDSNFSPIRQAG 1534
Query: 274 SGTPY---------HEGMMSPNYLLSPNMRLSPMSDAQFSP----YVGGMAFSPS----- 399
S TP G SP+ SP SP S SP Y +SP+
Sbjct: 1535 SETPAGFTEYQPSGFSGGFSPHGARSPGGGYSPSSPFNTSPTSPRYSPSSGYSPTSPGMS 1594
Query: 400 -------SSPGYSPSSPGYSPTSPGY---------SPTSPGYSPTSPGYSPTSPTYSP 525
SSPG+SP+SP ++PTSP Y SPTSP YSPTSPG+SPTSP+YSP
Sbjct: 1595 ITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPSYSP 1652
Score = 70.5 bits (171), Expect = 7e-11
Identities = 51/129 (39%), Positives = 63/129 (48%), Gaps = 38/129 (29%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-----LSPNMRLSPMSDAQFSPYVGGMAFSPSS----- 402
+PA SP S + Y + SP+Y SP + FSP AFSP+S
Sbjct: 1617 SPAYSPTSPS-YQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSP--ASPAFSPTSPSYSP 1673
Query: 403 -------------------SPGYSPSSPGYSPTSPG-YSPTSPGYS--------PTSPGY 498
SP Y+P+SPG+SPTSP YSPTSP +S PTSPGY
Sbjct: 1674 TSPALGVSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGY 1733
Query: 499 SPTSPTYSP 525
SPTSPT++P
Sbjct: 1734 SPTSPTFNP 1742
Score = 62.8 bits (151), Expect = 1e-08
Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA--QFSPYVGGMAFSPSSSPGYSPSS 426
+PA S T SP +S LSP S +++P G +SP+S YSP+S
Sbjct: 1658 SPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPG--WSPTSPETYSPTS 1715
Query: 427 PGYS--PTSPGYSPTSPGYSPTSPGYSPTSP 513
P +S PTSPG PTSPGYSPTSP ++P SP
Sbjct: 1716 PNFSGSPTSPG-GPTSPGYSPTSPTFNPISP 1745
[120][TOP]
>UniRef100_UPI000151A8B3 hypothetical protein PGUG_01105 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B3
Length = 1018
Score = 154 bits (390), Expect = 3e-36
Identities = 95/202 (47%), Positives = 119/202 (58%), Gaps = 27/202 (13%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILL+A A AE D G++EN++LGQLAP+GTG ++ +
Sbjct: 654 RHGINRADTGALMRCSFEETVEILLEAGAAAELDDCHGISENVVLGQLAPLGTGAFDVMV 713
Query: 181 NDEMLKNAIELQLPSYMD---GLEFGMTPARSPVSGTPYHEGMMSPNYL-------LSPN 330
+D++L+++ PS M G G TPY E M + + SP
Sbjct: 714 DDKILQSS-----PSNMSVPVGAAEGAGAYADDGGATPYREYDMEDDKIQFEEGAGFSP- 767
Query: 331 MRLSPMSD-AQFSPYVGGMAFSPS----------------SSPGYSPSSPGYSPTSPGYS 459
+ +P+SD A GG SPS +SPGY +SP YSPTSP YS
Sbjct: 768 IHTAPVSDGAGALTAYGGQPGSPSPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYS 827
Query: 460 PTSPGYSPTSPGYSPTSPTYSP 525
PTSP YSPTSP YSPTSP+YSP
Sbjct: 828 PTSPSYSPTSPSYSPTSPSYSP 849
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 823 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 874
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 875 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 905
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 830 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 881
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 882 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 912
Score = 73.2 bits (178), Expect = 1e-11
Identities = 43/91 (47%), Positives = 53/91 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 837 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 888
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPT P
Sbjct: 889 YSPTSPSYSPTSPSYSPTSPSYSPTFAKLQP 919
[121][TOP]
>UniRef100_O77165 DNA-directed RNA polymerase (Fragment) n=1 Tax=Breviata anathema
RepID=O77165_9EUKA
Length = 1690
Score = 154 bits (390), Expect = 3e-36
Identities = 87/199 (43%), Positives = 112/199 (56%), Gaps = 24/199 (12%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
R G+NR D G LMR SFEETVD+L DAA +A D LRGV++NIMLGQ+AP+GTG +L L
Sbjct: 1345 RFGMNRTDNGILMRASFEETVDVLQDAAQFAGHDELRGVSDNIMLGQVAPVGTGTFDLLL 1404
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSP---------NYLLSPNM 333
+ +L+ A + + + D ++P S TPY M+SP + SP++
Sbjct: 1405 DAALLREAYQFRTTTESDARGAIISPVGSSPQHTPYSSHMLSPQAQAIDNTYGLMFSPSV 1464
Query: 334 RLSP-----------MSDAQFSPYVGGMAFSP----SSSPGYSPSSPGYSPTSPGYSPTS 468
+SP M D G + P ++ GYSP+SP YSP SP YSP S
Sbjct: 1465 TMSPSGGFGMGMGMGMGDIPVPSSPGPFGYIPVPGSPAAAGYSPASPAYSPASPAYSPAS 1524
Query: 469 PGYSPTSPGYSPTSPTYSP 525
P YSP SP YSP SP YSP
Sbjct: 1525 PAYSPASPAYSPASPAYSP 1543
Score = 77.4 bits (189), Expect = 6e-13
Identities = 49/92 (53%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSP-NMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA SP S SP Y SP + SP S A +SP A+SP+S P YSP+SP
Sbjct: 1545 SPAYSPASPA---YSPASPAY--SPASPAYSPASPA-YSP--ASPAYSPAS-PAYSPASP 1595
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP SP YSP SP YSP SP YSP SP YSP
Sbjct: 1596 AYSPASPAYSPASPAYSPASPAYSPASPAYSP 1627
Score = 77.4 bits (189), Expect = 6e-13
Identities = 49/92 (53%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSP-NMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA SP S SP Y SP + SP S A +SP A+SP+S P YSP+SP
Sbjct: 1552 SPAYSPASPA---YSPASPAY--SPASPAYSPASPA-YSP--ASPAYSPAS-PAYSPASP 1602
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP SP YSP SP YSP SP YSP SP YSP
Sbjct: 1603 AYSPASPAYSPASPAYSPASPAYSPASPAYSP 1634
Score = 77.4 bits (189), Expect = 6e-13
Identities = 49/92 (53%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSP-NMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA SP S SP Y SP + SP S A +SP A+SP+S P YSP+SP
Sbjct: 1559 SPAYSPASPA---YSPASPAY--SPASPAYSPASPA-YSP--ASPAYSPAS-PAYSPASP 1609
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP SP YSP SP YSP SP YSP SP YSP
Sbjct: 1610 AYSPASPAYSPASPAYSPASPAYSPASPAYSP 1641
Score = 77.4 bits (189), Expect = 6e-13
Identities = 49/92 (53%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSP-NMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA SP S SP Y SP + SP S A +SP A+SP+S P YSP+SP
Sbjct: 1566 SPAYSPASPA---YSPASPAY--SPASPAYSPASPA-YSP--ASPAYSPAS-PAYSPASP 1616
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP SP YSP SP YSP SP YSP SP YSP
Sbjct: 1617 AYSPASPAYSPASPAYSPASPAYSPASPAYSP 1648
Score = 75.9 bits (185), Expect = 2e-12
Identities = 48/92 (52%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSP-NMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA SP S SP Y SP + SP S A +SP A+SP+S P YSP+SP
Sbjct: 1573 SPAYSPASPA---YSPASPAY--SPASPAYSPASPA-YSP--ASPAYSPAS-PAYSPASP 1623
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP SP YSP SP YSP SP YSP SP Y P
Sbjct: 1624 AYSPASPAYSPASPAYSPASPAYSPASPAYGP 1655
Score = 75.9 bits (185), Expect = 2e-12
Identities = 48/92 (52%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSP-NMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA SP S SP Y SP + SP S A +SP A+SP+S P YSP+SP
Sbjct: 1580 SPAYSPASPA---YSPASPAY--SPASPAYSPASPA-YSP--ASPAYSPAS-PAYSPASP 1630
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP SP YSP SP YSP SP Y P SP YSP
Sbjct: 1631 AYSPASPAYSPASPAYSPASPAYGPASPAYSP 1662
Score = 75.9 bits (185), Expect = 2e-12
Identities = 48/92 (52%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSP-NMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA SP S SP Y SP + SP S A +SP A+SP+S P YSP+SP
Sbjct: 1587 SPAYSPASPA---YSPASPAY--SPASPAYSPASPA-YSP--ASPAYSPAS-PAYSPASP 1637
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP SP YSP SP Y P SP YSP SP YSP
Sbjct: 1638 AYSPASPAYSPASPAYGPASPAYSPASPAYSP 1669
Score = 75.9 bits (185), Expect = 2e-12
Identities = 48/92 (52%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSP-NMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA SP S SP Y SP + SP S A +SP A+SP+S P YSP+SP
Sbjct: 1594 SPAYSPASPA---YSPASPAY--SPASPAYSPASPA-YSP--ASPAYSPAS-PAYSPASP 1644
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP SP Y P SP YSP SP YSP SP YSP
Sbjct: 1645 AYSPASPAYGPASPAYSPASPAYSPASPAYSP 1676
Score = 74.3 bits (181), Expect = 5e-12
Identities = 47/92 (51%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSP-NMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA SP S SP Y SP + SP S A +SP A+SP+S P YSP+SP
Sbjct: 1601 SPAYSPASPA---YSPASPAY--SPASPAYSPASPA-YSP--ASPAYSPAS-PAYSPASP 1651
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y P SP YSP SP YSP SP YSP SP Y P
Sbjct: 1652 AYGPASPAYSPASPAYSPASPAYSPASPAYDP 1683
Score = 65.9 bits (159), Expect = 2e-09
Identities = 43/88 (48%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSP-NMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA SP S SP Y SP + SP S A +SP A+SP+S P Y P+SP
Sbjct: 1608 SPAYSPASPA---YSPASPAY--SPASPAYSPASPA-YSP--ASPAYSPAS-PAYGPASP 1658
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSP 513
YSP SP YSP SP YSP SP Y P P
Sbjct: 1659 AYSPASPAYSPASPAYSPASPAYDPAEP 1686
[122][TOP]
>UniRef100_A5DCV3 DNA-directed RNA polymerase II subunit RPB1 (Fragments) n=1
Tax=Pichia guilliermondii RepID=RPB1_PICGU
Length = 1579
Score = 154 bits (390), Expect = 3e-36
Identities = 95/202 (47%), Positives = 119/202 (58%), Gaps = 27/202 (13%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILL+A A AE D G++EN++LGQLAP+GTG ++ +
Sbjct: 1220 RHGINRADTGALMRCSFEETVEILLEAGAAAELDDCHGISENVVLGQLAPLGTGAFDVMV 1279
Query: 181 NDEMLKNAIELQLPSYMD---GLEFGMTPARSPVSGTPYHEGMMSPNYL-------LSPN 330
+D++L+++ PS M G G TPY E M + + SP
Sbjct: 1280 DDKILQSS-----PSNMSVPVGAAEGAGAYADDGGATPYREYDMEDDKIQFEEGAGFSP- 1333
Query: 331 MRLSPMSD-AQFSPYVGGMAFSPS----------------SSPGYSPSSPGYSPTSPGYS 459
+ +P+SD A GG SPS +SPGY +SP YSPTSP YS
Sbjct: 1334 IHTAPVSDGAGALTAYGGQPGSPSPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYS 1393
Query: 460 PTSPGYSPTSPGYSPTSPTYSP 525
PTSP YSPTSP YSPTSP+YSP
Sbjct: 1394 PTSPSYSPTSPSYSPTSPSYSP 1415
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1389 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1440
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1441 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1471
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1396 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1447
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1448 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1478
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1403 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1454
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1455 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1485
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1410 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1461
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1462 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1492
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1417 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1468
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1469 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1499
Score = 83.2 bits (204), Expect = 1e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1424 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1475
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1476 YSPTSPSYSPTSPSYSPTSPSYSPTSPLYSP 1506
Score = 82.4 bits (202), Expect = 2e-14
Identities = 48/97 (49%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP ++SP+S SP Y
Sbjct: 1459 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTSPLYSPTSPSY 1511
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1512 SPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPAYSP 1548
Score = 82.0 bits (201), Expect = 2e-14
Identities = 46/91 (50%), Positives = 54/91 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP L + +SP +SP YSP+SP
Sbjct: 1480 SPSYSPTSPS---YSPTSPSY--SPTSPLYSPTSPSYSP----------TSPSYSPTSPS 1524
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1525 YSPTSPSYSPTSPQYSPTSPAYSPTSPQYSP 1555
Score = 62.4 bits (150), Expect = 2e-08
Identities = 40/84 (47%), Positives = 50/84 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S P + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1494 SPSYSPTS--PLYSPT-SPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PQYSPTSPA 1545
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSP 504
YSPTSP YSP SP YSP SP YSP
Sbjct: 1546 YSPTSPQYSPNSPQYSPRSPLYSP 1569
[123][TOP]
>UniRef100_Q1E2G9 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
RepID=Q1E2G9_COCIM
Length = 1750
Score = 154 bits (389), Expect = 4e-36
Identities = 103/247 (41%), Positives = 127/247 (51%), Gaps = 72/247 (29%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILLDAAA+AE D RGV+EN++LGQ+AP GTG+ ++YL
Sbjct: 1416 RHGINRADTGALMRCSFEETVEILLDAAAFAELDDCRGVSENLILGQMAPAGTGEFDVYL 1475
Query: 181 NDEMLKNAIE-----------------------------LQLPSYMDGLE-------FGM 252
+ ML + +Q Y+ + G
Sbjct: 1476 DQNMLMGVVSNNAGLVTMGNVDKGLISDGAATQYDSGSPMQENMYISSPDPDSQFSPIGQ 1535
Query: 253 TPARSPVSGTPYHE---GMMSPNYLLSPN-------MRLSPMS-----DAQFSPYVGGMA 387
T + +P T Y G SP SP SP S + +SP GM+
Sbjct: 1536 TGSETPAGFTEYQPPGFGGFSPAGARSPGGYSPTSPFNTSPTSPGYSPSSGYSPTSPGMS 1595
Query: 388 -----------FSPSS------SPGYSPSSPGY----SPTSPGYSPTSPGYSPTSPGYSP 504
FSP+S SP YSP+SPGY SPTSP YSPTSPG+SPTSP YSP
Sbjct: 1596 ITSPRYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSP 1655
Query: 505 TSPTYSP 525
TSP++SP
Sbjct: 1656 TSPSFSP 1662
Score = 89.4 bits (220), Expect = 1e-16
Identities = 51/100 (51%), Positives = 62/100 (62%), Gaps = 9/100 (9%)
Frame = +1
Query: 253 TPARSPVSG-TPYHEGMM--SPNYLLSPNMRLSPMSDAQFSPYVG------GMAFSPSSS 405
+P SP SG +P GM SP Y+ SP + + A SP G A SP+S
Sbjct: 1578 SPGYSPSSGYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTS- 1636
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP
Sbjct: 1637 PSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSP 1676
Score = 69.7 bits (169), Expect = 1e-10
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 14/82 (17%)
Frame = +1
Query: 322 SPNMRLSPMSDAQFSPYVGGMA---FSPSS--SPGYSPSSPGYSPTSP-GYSPTSPGYS- 480
SP + S + SP +GG SP+S SP Y+P+SPG+SPTSP YSPTSP ++
Sbjct: 1664 SPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFAG 1723
Query: 481 -------PTSPGYSPTSPTYSP 525
PTSPGYSPTSPT++P
Sbjct: 1724 SPTSPGGPTSPGYSPTSPTFNP 1745
Score = 62.8 bits (151), Expect = 1e-08
Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA--QFSPYVGGMAFSPSSSPGYSPSS 426
+PA S T SP + LSP S +++P G +SP+S YSP+S
Sbjct: 1661 SPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPG--WSPTSPEAYSPTS 1718
Query: 427 PGY--SPTSPGYSPTSPGYSPTSPGYSPTSP 513
P + SPTSPG PTSPGYSPTSP ++PTSP
Sbjct: 1719 PNFAGSPTSPG-GPTSPGYSPTSPTFNPTSP 1748
[124][TOP]
>UniRef100_C5PAJ4 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735 delta
SOWgp RepID=C5PAJ4_COCP7
Length = 1746
Score = 154 bits (389), Expect = 4e-36
Identities = 103/247 (41%), Positives = 127/247 (51%), Gaps = 72/247 (29%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILLDAAA+AE D RGV+EN++LGQ+AP GTG+ ++YL
Sbjct: 1416 RHGINRADTGALMRCSFEETVEILLDAAAFAELDDCRGVSENLILGQMAPAGTGEFDVYL 1475
Query: 181 NDEMLKNAIE-----------------------------LQLPSYMDGLE-------FGM 252
+ ML + +Q Y+ + G
Sbjct: 1476 DQNMLMGVVSNNAGLVTMGNVDKGLISDGAATQYDSGSPMQENMYISSPDPDSQFSPIGQ 1535
Query: 253 TPARSPVSGTPYHE---GMMSPNYLLSPN-------MRLSPMS-----DAQFSPYVGGMA 387
T + +P T Y G SP SP SP S + +SP GM+
Sbjct: 1536 TGSETPAGFTEYQPPGFGGFSPAGARSPGGYSPTSPFNTSPTSPGYSPSSGYSPTSPGMS 1595
Query: 388 -----------FSPSS------SPGYSPSSPGY----SPTSPGYSPTSPGYSPTSPGYSP 504
FSP+S SP YSP+SPGY SPTSP YSPTSPG+SPTSP YSP
Sbjct: 1596 ITSPRYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSP 1655
Query: 505 TSPTYSP 525
TSP++SP
Sbjct: 1656 TSPSFSP 1662
Score = 89.4 bits (220), Expect = 1e-16
Identities = 51/100 (51%), Positives = 62/100 (62%), Gaps = 9/100 (9%)
Frame = +1
Query: 253 TPARSPVSG-TPYHEGMM--SPNYLLSPNMRLSPMSDAQFSPYVG------GMAFSPSSS 405
+P SP SG +P GM SP Y+ SP + + A SP G A SP+S
Sbjct: 1578 SPGYSPSSGYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTS- 1636
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP
Sbjct: 1637 PSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSP 1676
Score = 69.7 bits (169), Expect = 1e-10
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 14/82 (17%)
Frame = +1
Query: 322 SPNMRLSPMSDAQFSPYVGGMA---FSPSS--SPGYSPSSPGYSPTSP-GYSPTSPGYS- 480
SP + S + SP +GG SP+S SP Y+P+SPG+SPTSP YSPTSP ++
Sbjct: 1664 SPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFAG 1723
Query: 481 -------PTSPGYSPTSPTYSP 525
PTSPGYSPTSPT++P
Sbjct: 1724 SPTSPGGPTSPGYSPTSPTFNP 1745
Score = 68.6 bits (166), Expect = 3e-10
Identities = 48/105 (45%), Positives = 59/105 (56%), Gaps = 14/105 (13%)
Frame = +1
Query: 253 TPARSPVS-GTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
+PA SP S G + SP+Y SP + S + SP +FSP+S P +SP+S
Sbjct: 1618 SPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSP-----SFSPAS-PAFSPTS 1671
Query: 427 PGYSPTSPGY-----------SPTSPGYSPTSPGYSPTSP-TYSP 525
P YSPTSP SPTSP Y+PTSPG+SPTSP YSP
Sbjct: 1672 PSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSP 1716
Score = 58.5 bits (140), Expect = 3e-07
Identities = 39/89 (43%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDA--QFSPYVGGMAFSPSSSPGYSPSS 426
+PA S T SP + LSP S +++P G +SP+S YSP+S
Sbjct: 1661 SPASPAFSPTSPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPG--WSPTSPEAYSPTS 1718
Query: 427 PGY--SPTSPGYSPTSPGYSPTSPGYSPT 507
P + SPTSPG PTSPGYSPTSP ++PT
Sbjct: 1719 PNFAGSPTSPG-GPTSPGYSPTSPTFNPT 1746
[125][TOP]
>UniRef100_UPI000186D846 predicted protein n=1 Tax=Pediculus humanus corporis
RepID=UPI000186D846
Length = 1885
Score = 153 bits (387), Expect = 6e-36
Identities = 98/239 (41%), Positives = 120/239 (50%), Gaps = 64/239 (26%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAA++AE D +RGV+ENI++GQL +GT C+ +
Sbjct: 1400 RHGINRQDTGALMRCSFEETVDVLMDAASHAELDPMRGVSENIIMGQLPRMGTDKCKAGI 1459
Query: 181 N-------------DEMLKNAIELQLPSYMDGLEFGMTPAR------------------- 264
M NA+ + M G TPA
Sbjct: 1460 EIPMSIGHGMMSSVGMMFGNAVTPSMSPQMTPWNQGETPAYVSAWSPHAGSGMTPGGPSF 1519
Query: 265 ------------------SPVSGTPYHEGMMSPNYLLSPNMRLSPM---SDAQFSPYVGG 381
SP G+P G + Y+ SP +SP S F+P
Sbjct: 1520 SPSGSSDASGLSPGYSPWSPQPGSPSSPGPSNSPYVPSPGGGMSPSYSPSSPAFAPTSPS 1579
Query: 382 MA-----FSPS------SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
M +SP+ SSP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1580 MTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1638
Score = 92.8 bits (229), Expect = 1e-17
Identities = 51/92 (55%), Positives = 58/92 (63%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
MTP S S T SPNY SPN + +SP ++SP+S P YSP+SP
Sbjct: 1580 MTPTSSNYSPTSPSYSPSSPNY--SPNSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSP 1634
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1635 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1666
Score = 81.3 bits (199), Expect = 4e-14
Identities = 46/90 (51%), Positives = 57/90 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1619 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1670
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSP YSPTSP+YS
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1700
Score = 80.5 bits (197), Expect = 7e-14
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1626 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1677
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YS TSP+YSP
Sbjct: 1678 YSPTSPSYSPTSPSYSPTSPSYSRTSPSYSP 1708
Score = 80.5 bits (197), Expect = 7e-14
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1633 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1684
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YS TSP YSPTSP+YSP
Sbjct: 1685 YSPTSPSYSPTSPSYSRTSPSYSPTSPSYSP 1715
Score = 78.2 bits (191), Expect = 3e-13
Identities = 48/91 (52%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TPA S T SP+ SP R SP S + +SP G +SP+S P YSP+SP
Sbjct: 1721 TPASPSFSPT-------SPSLYSSP--RYSPASPS-YSP--GSPKYSPTS-PSYSPTSPS 1767
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+ SP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 1768 YASVSPQYTPTSPQYSPTSPTYSPTSPSYSP 1798
Score = 77.4 bits (189), Expect = 6e-13
Identities = 44/91 (48%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1640 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1691
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YS TSP YSPTSP YSP+SP Y+P
Sbjct: 1692 YSPTSPSYSRTSPSYSPTSPSYSPSSPNYTP 1722
Score = 77.4 bits (189), Expect = 6e-13
Identities = 50/99 (50%), Positives = 59/99 (59%), Gaps = 8/99 (8%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SPNY SP+ SP S + +S +SP+S P YSP SP
Sbjct: 1703 SPSYSPTSPS---YSPSSPNYTPASPSF--SPTSPSLYS----SPRYSPAS-PSYSPGSP 1752
Query: 430 GYSPTSPGYSPTSPG-------YSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSPTYSP
Sbjct: 1753 KYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSPTYSP 1791
Score = 74.3 bits (181), Expect = 5e-12
Identities = 42/91 (46%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1647 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1698
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YS TSP YSPTSP YSP+SP Y+P SP++SP
Sbjct: 1699 YSRTSPSYSPTSPSYSPSSPNYTPASPSFSP 1729
Score = 72.0 bits (175), Expect = 2e-11
Identities = 46/99 (46%), Positives = 59/99 (59%), Gaps = 8/99 (8%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S + SP++ + R SP S ++SP +++SP+S P YSPSS
Sbjct: 1786 SPTYSPTSPS---YSPSSPSHTPGASTRYSPTSP-KYSPT--SLSYSPAS-PQYSPSSSK 1838
Query: 433 YSPTSPGYSPTSPGYSPTS--------PGYSPTSPTYSP 525
YSPTSP Y+PTSP YS +S P YSPTSPTYSP
Sbjct: 1839 YSPTSPTYTPTSPDYSASSPTYSPTGPPSYSPTSPTYSP 1877
Score = 71.2 bits (173), Expect = 4e-11
Identities = 46/106 (43%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
PSY G +P S T +SP Y + + + SP S SPS
Sbjct: 1745 PSYSPGSP-KYSPTSPSYSPTSPSYASVSPQYTPT-SPQYSPTSPTYSPTSPSYSPSSPS 1802
Query: 400 SSPG----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+PG YSP+SP YSPTS YSP SP YSP+S YSPTSPTY+P
Sbjct: 1803 HTPGASTRYSPTSPKYSPTSLSYSPASPQYSPSSSKYSPTSPTYTP 1848
Score = 69.7 bits (169), Expect = 1e-10
Identities = 44/94 (46%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSP---GYSPS 423
+P SP S T SP+Y S +P + ++SP SP SP YSP+
Sbjct: 1779 SPQYSPTSPT---YSPTSPSYSPSSPSH-TPGASTRYSPT------SPKYSPTSLSYSPA 1828
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSP+S YSPTSP Y+PTSP YS +SPTYSP
Sbjct: 1829 SPQYSPSSSKYSPTSPTYTPTSPDYSASSPTYSP 1862
Score = 68.9 bits (167), Expect = 2e-10
Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ +P + T Y SP Y SP + Q+SP +SP+S P Y+P+SP
Sbjct: 1800 SPSHTPGASTRYSP--TSPKY--SPTSLSYSPASPQYSP--SSSKYSPTS-PTYTPTSPD 1852
Query: 433 YSPTSPGYSPTSP-GYSPTSPGYSPTSPTY 519
YS +SP YSPT P YSPTSP YSPTSP Y
Sbjct: 1853 YSASSPTYSPTGPPSYSPTSPTYSPTSPEY 1882
Score = 67.8 bits (164), Expect = 4e-10
Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YS +SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSRTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPT------YSP 525
YSPTSP YSP+SP Y+P SP +SPTSP+ YSP
Sbjct: 1706 YSPTSPSYSPSSPNYTPASPSFSPTSPSLYSSPRYSP 1742
Score = 61.2 bits (147), Expect = 4e-08
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 14/105 (13%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SP+ + S ++ SP ++SP+S P YSPSSP
Sbjct: 1668 SPSYSPTSPS---YSPTSPSYSPTSPSYSPTSPSYSRTSP-----SYSPTS-PSYSPSSP 1718
Query: 430 GYSPTSPGYSPTSPG------YSPTSPGYS-------PTSPTYSP 525
Y+P SP +SPTSP YSP SP YS PTSP+YSP
Sbjct: 1719 NYTPASPSFSPTSPSLYSSPRYSPASPSYSPGSPKYSPTSPSYSP 1763
[126][TOP]
>UniRef100_C5FCL2 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FCL2_NANOT
Length = 1748
Score = 153 bits (386), Expect = 8e-36
Identities = 101/241 (41%), Positives = 122/241 (50%), Gaps = 66/241 (27%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILLDAAA+AE D RGV+EN++LGQ+AP GTG+ ++YL
Sbjct: 1414 RHGINRADTGALMRCSFEETVEILLDAAAFAELDDCRGVSENLILGQMAPAGTGEFDVYL 1473
Query: 181 NDEMLKNAIELQLP-SYMDGLEFGMT---PARSPVSGTPYHEGM---------------- 300
+ ML + + G GM A SG+P E M
Sbjct: 1474 DQSMLMGVVSNNAGLGAVGGEHKGMLSDGAATQYDSGSPMQENMYISSPDPDSQFSPVRQ 1533
Query: 301 -------------------MSPNYLLSPNMRLSPMSDAQFSP----YVGGMAFSPSS--- 402
SP+ SP SP S SP Y +SP+S
Sbjct: 1534 AGSENAVGFADYQPPSYGGFSPHEPRSPGGGYSPSSPFNTSPTSPAYSPSSGYSPTSPGM 1593
Query: 403 ----------------SPGYSPSSPGYSPTSPGY----SPTSPGYSPTSPGYSPTSPTYS 522
SP ++P+SP YSPTSPGY SPTSP YSPTSPG+SPTSP+YS
Sbjct: 1594 SITSPRFISSPAFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYS 1653
Query: 523 P 525
P
Sbjct: 1654 P 1654
Score = 88.2 bits (217), Expect = 3e-16
Identities = 52/100 (52%), Positives = 63/100 (63%), Gaps = 9/100 (9%)
Frame = +1
Query: 253 TPARSPVSG-TPYHEGMM--SPNYLLSPNMRLSPMSDAQFSPYVG------GMAFSPSSS 405
+PA SP SG +P GM SP ++ SP + S A SP G A SP+S
Sbjct: 1577 SPAYSPSSGYSPTSPGMSITSPRFISSPAFSPASPSFAPTSPAYSPTSPGYGQAQSPTS- 1635
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP
Sbjct: 1636 PSYSPTSPGFSPTSPSYSPTSPSFSPASPVFSPTSPSYSP 1675
Score = 70.9 bits (172), Expect = 5e-11
Identities = 42/81 (51%), Positives = 52/81 (64%), Gaps = 13/81 (16%)
Frame = +1
Query: 322 SPNMRLSPMSDAQFSPYVGGMA--FSPSS--SPGYSPSSPGYSPTSP-GYSPTSPGYS-- 480
SP + S + SP +GG SP+S SP Y+P+SPG+SPTSP YSPTSP +S
Sbjct: 1663 SPVFSPTSPSYSPTSPALGGTGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFSGS 1722
Query: 481 ------PTSPGYSPTSPTYSP 525
PTSPGYSPTSPT++P
Sbjct: 1723 PTSPGGPTSPGYSPTSPTFNP 1743
Score = 67.8 bits (164), Expect = 4e-10
Identities = 48/104 (46%), Positives = 59/104 (56%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVS-GTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
+PA SP S G + SP+Y SP + S + SP +FSP+S P +SP+S
Sbjct: 1617 SPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSP-----SFSPAS-PVFSPTS 1670
Query: 427 PGYSPTSPGY----------SPTSPGYSPTSPGYSPTSP-TYSP 525
P YSPTSP SPTSP Y+PTSPG+SPTSP YSP
Sbjct: 1671 PSYSPTSPALGGTGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSP 1714
Score = 63.2 bits (152), Expect = 1e-08
Identities = 43/93 (46%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Frame = +1
Query: 253 TPARSPVS----GTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSP 420
+P+ SP S GT H LSP SP +++P G +SP+S YSP
Sbjct: 1670 SPSYSPTSPALGGTGRH---------LSPTSPTSP----KYTPTSPG--WSPTSPEAYSP 1714
Query: 421 SSPGYS--PTSPGYSPTSPGYSPTSPGYSPTSP 513
+SP +S PTSPG PTSPGYSPTSP ++PTSP
Sbjct: 1715 TSPNFSGSPTSPG-GPTSPGYSPTSPTFNPTSP 1746
[127][TOP]
>UniRef100_P16356 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
elegans RepID=RPB1_CAEEL
Length = 1852
Score = 153 bits (386), Expect = 8e-36
Identities = 103/225 (45%), Positives = 126/225 (56%), Gaps = 50/225 (22%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR + G LMRCSFEETVDIL++AA +AE D ++GV+ENIMLGQLA GTG +L L
Sbjct: 1404 RHGINRQEVGALMRCSFEETVDILMEAAVHAEEDPVKGVSENIMLGQLARCGTGCFDLVL 1463
Query: 181 NDEMLKNAIELQLPSYMDGLEFG----------MTPARSPVSG--TPYHEGM-------- 300
+ E K +E+ M G +G +PA SP + TP + G
Sbjct: 1464 DVEKCKYGMEIPQNVVMGGGFYGSFAGSPSNREFSPAHSPWNSGVTPTYAGAAWSPTTGG 1523
Query: 301 MSPNYLLSP----NMRLSPMSDAQFS---------------PYVGGMA---FSPSS---- 402
MSP SP + SP ++ +S P GGM+ +SPSS
Sbjct: 1524 MSPGAGFSPAGNTDGGASPFNEGGWSPASPGDPLGALSPRTPSYGGMSPGVYSPSSPQFS 1583
Query: 403 --SPGYSPSSPGYSPTSP--GYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSP+SP YSPTSP G SP SP YSPTSP YSPTSP+YSP
Sbjct: 1584 MTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSP 1628
Score = 90.1 bits (222), Expect = 8e-17
Identities = 56/110 (50%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
Frame = +1
Query: 202 AIELQLPSYMDGLEFGMTPARSP-VSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYV 375
A+ + PSY G+ G+ SP S T H SP+Y SP SP+S + +SP
Sbjct: 1559 ALSPRTPSY-GGMSPGVYSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPS-YSPT- 1615
Query: 376 GGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
++SP+S P YSP+SP YSPTSP YSPTSP YSPTSP YSP+SP+YSP
Sbjct: 1616 -SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSP 1663
Score = 85.9 bits (211), Expect = 2e-15
Identities = 51/91 (56%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S T SP Y SP SP Y G +SPSS P YSPSSP
Sbjct: 1679 SPTYSPTSPT---YSPTSPTY--SPT---SPTYSPTSPSYESGGGYSPSS-PKYSPSSPT 1729
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SPTY+P
Sbjct: 1730 YSPTSPSYSPTSPQYSPTSPQYSPSSPTYTP 1760
Score = 85.5 bits (210), Expect = 2e-15
Identities = 50/91 (54%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SPSS P YSPSSP
Sbjct: 1623 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSP--SSPSYSPSS-PSYSPSSPR 1674
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1675 YSPTSPTYSPTSPTYSPTSPTYSPTSPTYSP 1705
Score = 79.0 bits (193), Expect = 2e-13
Identities = 47/89 (52%), Positives = 56/89 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP S +SP ++SPSS P YSP+SP
Sbjct: 1630 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPSSPSYSP--SSPSYSPSS-PRYSPTSPT 1681
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTY 519
YSPTSP YSPTSP YSPTSP YSPTSP+Y
Sbjct: 1682 YSPTSPTYSPTSPTYSPTSPTYSPTSPSY 1710
Score = 76.6 bits (187), Expect = 1e-12
Identities = 51/109 (46%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
Frame = +1
Query: 220 PSYMDGLEFG-MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSP 396
PSY G + +P SP S T SP+Y SP + Q+SP ++P
Sbjct: 1708 PSYESGGGYSPSSPKYSPSSPT---YSPTSPSY--SPTSPQYSPTSPQYSP--SSPTYTP 1760
Query: 397 SSSPGYSP------SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SS P Y+P SSP YSPTSP YSPTSP Y+P+SP YSPTSPTY+P
Sbjct: 1761 SS-PTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTP 1808
Score = 71.2 bits (173), Expect = 4e-11
Identities = 44/96 (45%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNY-----LLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYS 417
TP+ SP G SP Y SP S Q+SP SPS PG
Sbjct: 1759 TPS-SPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPG-- 1815
Query: 418 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S YSPTSP YSP+SP YSP SP YSP+SPTY P
Sbjct: 1816 -TSAQYSPTSPTYSPSSPTYSPASPSYSPSSPTYDP 1850
Score = 56.6 bits (135), Expect = 1e-06
Identities = 31/62 (50%), Positives = 37/62 (59%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSP 483
SP Y SP+ + P + AQ+SP +SP YSPSSP YSP SP YSP+SP Y P
Sbjct: 1803 SPTYTPSPSEQ--PGTSAQYSP----------TSPTYSPSSPTYSPASPSYSPSSPTYDP 1850
Query: 484 TS 489
S
Sbjct: 1851 NS 1852
[128][TOP]
>UniRef100_A7S8F9 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7S8F9_NEMVE
Length = 1929
Score = 152 bits (384), Expect = 1e-35
Identities = 102/244 (41%), Positives = 130/244 (53%), Gaps = 69/244 (28%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR + G LMR SFEETVD+L+DAAA+AETD LRGV+E I++G+L IGTG +L L
Sbjct: 1411 RHGINRQEVGALMRSSFEETVDVLMDAAAHAETDYLRGVSECIIMGKLPRIGTGSFDLML 1470
Query: 181 NDEMLKNAIEL---------------------------------------QLPSYMD--- 234
+ E K+ +E+ P+YM+
Sbjct: 1471 DAEKCKHGMEIPTNIMGPGMGGAMAAIGVFFGAAGSPSAMSPQMTPWNMGATPAYMEAWS 1530
Query: 235 -GLEFGMTPARSPVSGTPYHE------GMMSPNYLLSPNMRLSPMSDAQFSPYVGGMA-- 387
G+ GMTP + S + + G SP++ +SP SP+S SPY+ A
Sbjct: 1531 PGMGSGMTPGAASFSPSAASDASGMSPGGFSPSW-MSPTPG-SPVSPGPTSPYIPSPAAA 1588
Query: 388 ---FSPSS-------------SPGYSPSSPGYSPTSP--GYSPTSPGYSPTSPGYSPTSP 513
+SPSS SP YSP+SPGYSP+SP GYSP SP YSPTSP YSPTSP
Sbjct: 1589 SPGYSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSP 1648
Query: 514 TYSP 525
+YSP
Sbjct: 1649 SYSP 1652
Score = 87.0 bits (214), Expect = 7e-16
Identities = 48/93 (51%), Positives = 57/93 (61%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +PA S T SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 1628 GYSPASPSYSPTSPSYSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1682
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1683 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1715
Score = 85.1 bits (209), Expect = 3e-15
Identities = 48/98 (48%), Positives = 57/98 (58%), Gaps = 6/98 (6%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
M+PA S T SP+ SP + +SP ++SP+S SP
Sbjct: 1606 MSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPT--SPSYSPTSPSYSPTSPS 1663
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1664 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1701
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1654 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1705
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1706 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1736
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1661 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1712
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1713 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1743
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1668 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1719
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1720 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1750
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1675 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1726
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1727 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1757
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1682 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1733
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1734 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1764
Score = 82.4 bits (202), Expect = 2e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1689 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1740
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP+YSP
Sbjct: 1741 YSPTSPSYSPTSPSYSPTSPSYSPSSPSYSP 1771
Score = 82.4 bits (202), Expect = 2e-14
Identities = 51/115 (44%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Frame = +1
Query: 214 QLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYV-----G 378
Q PSY +PA S T SPNY SP S ++SP
Sbjct: 1779 QSPSYASPSSPKYSPASPSYSPTSPKYSPTSPNY--SPASPSYSPSSPKYSPTSPSYTPA 1836
Query: 379 GMAFSPSS------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
++SP+S SP YSPSSP Y+PTSP YSPTSP YSP SP YSPT+P+Y+P
Sbjct: 1837 SPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSPTTPSYTP 1891
Score = 81.3 bits (199), Expect = 4e-14
Identities = 45/91 (49%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP+ S +SP +++ SSP YSP+SP
Sbjct: 1745 SPSYSPTSPS---YSPTSPSY--SPSSPSYSPSSPSYSPQ--SPSYASPSSPKYSPASPS 1797
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP SP YSP+SP YSP
Sbjct: 1798 YSPTSPKYSPTSPNYSPASPSYSPSSPKYSP 1828
Score = 80.9 bits (198), Expect = 5e-14
Identities = 45/91 (49%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1696 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1747
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+SP YSP+SP+YSP
Sbjct: 1748 YSPTSPSYSPTSPSYSPSSPSYSPSSPSYSP 1778
Score = 74.7 bits (182), Expect = 4e-12
Identities = 42/90 (46%), Positives = 56/90 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1703 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1754
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
YSPTSP YSP+SP YSP+SP YSP SP+Y+
Sbjct: 1755 YSPTSPSYSPSSPSYSPSSPSYSPQSPSYA 1784
[129][TOP]
>UniRef100_UPI000179348F PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179348F
Length = 1862
Score = 152 bits (383), Expect = 2e-35
Identities = 112/276 (40%), Positives = 130/276 (47%), Gaps = 101/276 (36%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+LLDAA++AE D +RGV+ENI++GQL +GTG +L L
Sbjct: 1411 RHGINRQDTGALMRCSFEETVDVLLDAASHAEVDPMRGVSENIIMGQLPRMGTGCFDLLL 1470
Query: 181 NDEMLKNAIELQL---------------------------------PSYMD----GLEFG 249
+ E K+ IE+ + P Y + LE G
Sbjct: 1471 DAEKAKDGIEIPMDNGYMGMGGGGMFMAAGTPSMSPAMTPWDQTSTPMYQNNWSSSLETG 1530
Query: 250 MTP--------ARSPVSGT-------------PYHEGM-----------MSPNY------ 315
MTP S SGT P GM MSPNY
Sbjct: 1531 MTPGGPGFSPAGSSEASGTSPFWMSSGGTPGSPGSPGMATSPYVPSPSSMSPNYNYPSSP 1590
Query: 316 ---LLSPNM---RLSPMSD------------AQFSPYVGGMAFSPSSSP--------GYS 417
LSP+M SP S + SP SPS SP YS
Sbjct: 1591 QFGSLSPSMTPTNYSPTSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPTSPSYSHTSYS 1650
Query: 418 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1686
Score = 92.0 bits (227), Expect = 2e-17
Identities = 55/110 (50%), Positives = 65/110 (59%), Gaps = 9/110 (8%)
Frame = +1
Query: 223 SYMDGLEFG-----MTPAR-SPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQF--SPYV 375
+Y +FG MTP SP S +P Y +SPN SP S + SP
Sbjct: 1585 NYPSSPQFGSLSPSMTPTNYSPTSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPTSPSY 1644
Query: 376 GGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
++SP+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1645 SHTSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1693
Score = 86.3 bits (212), Expect = 1e-15
Identities = 45/91 (49%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + H + SP + +SP ++SP+S P YSP+SP
Sbjct: 1634 SPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1690
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1721
Score = 85.9 bits (211), Expect = 2e-15
Identities = 50/102 (49%), Positives = 61/102 (59%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
PSY +P+ SP S + SP+Y SP + +SP ++SP+
Sbjct: 1642 PSYSHTSYSPTSPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPT 1694
Query: 400 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1695 S-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1735
Score = 68.9 bits (167), Expect = 2e-10
Identities = 50/108 (46%), Positives = 57/108 (52%), Gaps = 22/108 (20%)
Frame = +1
Query: 265 SPVSGTP-YHEGMMSPNYLLSPNMR-LSPM----------SDAQFSPYVGGMAFSPS--- 399
S SGT Y SP+ +SP SPM S Q +P GG ++ S
Sbjct: 1750 SATSGTSNYKYSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSLQHTPNAGGTQYNQSYSP 1809
Query: 400 SSPGYSPS-----SPGYSPTSPGYSPT--SPGYSPTSPGYSPTSPTYS 522
SSP YSP+ SP YSPTSP YSP SP YSP+SP YSPTSP YS
Sbjct: 1810 SSPVYSPTNFSMASPRYSPTSPTYSPGVGSPHYSPSSPSYSPTSPNYS 1857
Score = 63.2 bits (152), Expect = 1e-08
Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 19/110 (17%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1674 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1725
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPT-------------------SPTYSP 525
YSPTSP YSP+SP Y+ +SP Y+P+ SPTYSP
Sbjct: 1726 YSPTSPSYSPSSPQYAASSPSYTPSATSGTSNYKYSPTSPSLAVSPTYSP 1775
Score = 56.6 bits (135), Expect = 1e-06
Identities = 45/116 (38%), Positives = 58/116 (50%), Gaps = 25/116 (21%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S P + SP+Y S S S+ ++SP +A SP+ YSP+SP
Sbjct: 1730 SPSYSPSS--PQYAAS-SPSYTPSAT---SGTSNYKYSPTSPSLAVSPT----YSPTSPM 1779
Query: 433 YSPT--------------------SPGYSPTSPGYSPT-----SPGYSPTSPTYSP 525
YSP+ + YSP+SP YSPT SP YSPTSPTYSP
Sbjct: 1780 YSPSNASYSPSSLQHTPNAGGTQYNQSYSPSSPVYSPTNFSMASPRYSPTSPTYSP 1835
[130][TOP]
>UniRef100_A9V5W6 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9V5W6_MONBE
Length = 1307
Score = 152 bits (383), Expect = 2e-35
Identities = 94/216 (43%), Positives = 120/216 (55%), Gaps = 41/216 (18%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR +TG LM+ SFEETVDILL+AAA+ ETD L+GV+ENIMLGQ+ P GTG +L L
Sbjct: 900 RHGVNRQNTGVLMKASFEETVDILLEAAAHGETDYLKGVSENIMLGQVIPGGTGCFDLLL 959
Query: 181 NDEMLKNAIELQLPSY-----MDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP 345
+ + L++A+ ++ P G G + TP+ G M+P SP +
Sbjct: 960 DQDRLQHAVPVE-PGLGGLFAKGGDANGAATPWGEGNATPFGMGGMTPQNASSPYLGAGQ 1018
Query: 346 MSDAQFSPYV------------GGMA-----------------------FSPSSSPGYSP 420
FSP V GG+A + PSS GYSP
Sbjct: 1019 TPIGGFSPVVAGAFSPGGMLSPGGIAQSPGGAMSPGGAMSPGVVSASPFYDPSSPAGYSP 1078
Query: 421 SSPGYSPTSPGYSPTSPGYSPTSP-GYSPTSPTYSP 525
+SP YSPTSPG SPTSPG+SP SP G++PTSP YSP
Sbjct: 1079 TSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSP 1114
Score = 88.2 bits (217), Expect = 3e-16
Identities = 55/108 (50%), Positives = 64/108 (59%), Gaps = 17/108 (15%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMR-LSPMSDAQFSPYVG-GMAFSPSS------- 402
+P+ SP S P G SP+Y SP+ SP +AQ Y ++SP+S
Sbjct: 1116 SPSYSPTS--PNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPT 1173
Query: 403 -------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPGYSPSSP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1174 SPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSP 1221
Score = 87.4 bits (215), Expect = 5e-16
Identities = 49/75 (65%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Frame = +1
Query: 304 SPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYS 480
SP+Y SPN++ SP S +SP G +SPSS P YSP+SP YSPTSP YSPTSP YS
Sbjct: 1159 SPSYSPTSPNVK-SPTSPG-YSPTSPG--YSPSS-PSYSPTSPNYSPTSPSYSPTSPNYS 1213
Query: 481 PTSPGYSPTSPTYSP 525
PTSP YSPTSP YSP
Sbjct: 1214 PTSPSYSPTSPNYSP 1228
Score = 87.4 bits (215), Expect = 5e-16
Identities = 49/96 (51%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVG--GMAFSPSSSPGYS 417
G +P+ S T + SP+Y SPN + S + SP ++SP+S P YS
Sbjct: 1183 GYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTS-PNYS 1241
Query: 418 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1242 PTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSP 1277
Score = 86.3 bits (212), Expect = 1e-15
Identities = 54/111 (48%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Frame = +1
Query: 202 AIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVG 378
A Q P+Y +P+ SP S P + SP Y SP S S + SP
Sbjct: 1147 AYNAQSPAYSP-----TSPSYSPTS--PNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYS 1199
Query: 379 --GMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
++SP+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1200 PTSPSYSPTS-PNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSP 1249
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/93 (50%), Positives = 56/93 (60%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S + SPNY SP + +SP ++SP+S P YSP+S
Sbjct: 1176 GYSPTSPGYSPSSPSYSPTSPNY--SPTSPSYSPTSPNYSPT--SPSYSPTS-PNYSPTS 1230
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1231 PSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSP 1263
Score = 84.0 bits (206), Expect = 6e-15
Identities = 50/120 (41%), Positives = 58/120 (48%), Gaps = 18/120 (15%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
P + G TP S T SPN + + SP S + A SP+
Sbjct: 1095 PGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPA 1154
Query: 400 ------------------SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SPGYSP+SPGYSP+SP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1155 YSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSP 1214
Score = 80.9 bits (198), Expect = 5e-14
Identities = 47/88 (53%), Positives = 53/88 (60%), Gaps = 14/88 (15%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SPNY SP + +SP ++SP+S SP YSP+SP YSPTSP YSPT
Sbjct: 1223 SPNY--SPTSPSYSPTSPNYSPT--SPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1278
Query: 466 --------SPGYSPTSPGYSPTSPTYSP 525
SPGYSPTSPGYSPTSP YSP
Sbjct: 1279 ANGTSGPTSPGYSPTSPGYSPTSPGYSP 1306
Score = 71.6 bits (174), Expect = 3e-11
Identities = 41/76 (53%), Positives = 48/76 (63%), Gaps = 8/76 (10%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPT--------SPGYS 459
SPNY SP + +SP ++SP+S P YSP+SP YSPT SPGYS
Sbjct: 1237 SPNY--SPTSPSYSPTSPNYSPT--SPSYSPTS-PNYSPTSPSYSPTANGTSGPTSPGYS 1291
Query: 460 PTSPGYSPTSPGYSPT 507
PTSPGYSPTSPGYSP+
Sbjct: 1292 PTSPGYSPTSPGYSPS 1307
[131][TOP]
>UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CBQ3_YARLI
Length = 1750
Score = 151 bits (382), Expect = 2e-35
Identities = 106/238 (44%), Positives = 123/238 (51%), Gaps = 63/238 (26%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILL+AAA AE D RGV+ENIMLGQLAP+GTG+ + L
Sbjct: 1392 RHGINRADTGALMRCSFEETVEILLEAAAVAELDDCRGVSENIMLGQLAPLGTGNFGVML 1451
Query: 181 NDEMLK--------------------------NAIELQLPSYMDGLEF--GMTPARSPV- 273
+++ L + P+Y D L+ G SP+
Sbjct: 1452 DEDQLSTLPADYSKTAGIAAGHGEMGSADGAATPYDSSSPAY-DALQARGGGDVIFSPIG 1510
Query: 274 -SGTPYHEGMMS-----------------PNYLLSPNMRLSP---MSDAQFSPYVGGM-- 384
SG P G S P S SP + +SP GM
Sbjct: 1511 TSGAPEMSGGFSEYGGFGHGGDGSGSAYTPTSPFSSFGAASPGFAATSPSYSPSSPGMGL 1570
Query: 385 -----AFSPSS------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+FSPSS SP YSPSSP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1571 GAASPSFSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1628
Score = 85.1 bits (209), Expect = 3e-15
Identities = 48/97 (49%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S G SP++ SP+ + +SP ++SP+S SP Y
Sbjct: 1558 SPSYSP-SSPGMGLGAASPSF--SPSSPAFAATSPSYSP--SSPSYSPTSPSYSPTSPSY 1612
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1613 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1649
Score = 83.6 bits (205), Expect = 8e-15
Identities = 45/91 (49%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ + T SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1578 SPSSPAFAATSPSYSPSSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1632
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1633 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1663
Score = 79.0 bits (193), Expect = 2e-13
Identities = 50/99 (50%), Positives = 60/99 (60%), Gaps = 8/99 (8%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP- 429
+P+ SP S +P SP+Y SP S + +SP ++SP+S P YSPSSP
Sbjct: 1658 SPSYSPTSYSP-----TSPSY--------SPTSPS-YSPT--SPSYSPTS-PSYSPSSPK 1700
Query: 430 -------GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1701 FNAGASTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1739
Score = 77.0 bits (188), Expect = 7e-13
Identities = 43/79 (54%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSP 483
SP+Y SP + +SP ++SP+S P YSP+SP YSPTSP YSPTSP YSP
Sbjct: 1602 SPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYSP 1656
Query: 484 TSP-----GYSPTSPTYSP 525
TSP YSPTSP+YSP
Sbjct: 1657 TSPSYSPTSYSPTSPSYSP 1675
[132][TOP]
>UniRef100_Q9BMP3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=Q9BMP3_MONBE
Length = 1743
Score = 151 bits (381), Expect = 3e-35
Identities = 94/216 (43%), Positives = 119/216 (55%), Gaps = 41/216 (18%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR +TG LM+ SFEETVDILL+AAA+ ETD L+GV+ENIMLGQ+ P GTG +L L
Sbjct: 1336 RHGVNRQNTGVLMKASFEETVDILLEAAAHGETDYLKGVSENIMLGQVIPGGTGCFDLLL 1395
Query: 181 NDEMLKNAIELQLPSY-----MDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP 345
+ + L++A+ ++ P G G + TP+ G M+P SP
Sbjct: 1396 DQDRLQHAVPVE-PGLGGLFAKGGDANGAATPWGEGNATPFGMGGMTPQNASSPYFGAGQ 1454
Query: 346 MSDAQFSPYV------------GGMA-----------------------FSPSSSPGYSP 420
FSP V GG+A + PSS GYSP
Sbjct: 1455 TPIGGFSPVVAGAFSPGGMLSPGGIAQSPGGAMSPGGAMSPGVVSASPFYDPSSPAGYSP 1514
Query: 421 SSPGYSPTSPGYSPTSPGYSPTSP-GYSPTSPTYSP 525
+SP YSPTSPG SPTSPG+SP SP G++PTSP YSP
Sbjct: 1515 TSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYSP 1550
Score = 88.2 bits (217), Expect = 3e-16
Identities = 55/108 (50%), Positives = 64/108 (59%), Gaps = 17/108 (15%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMR-LSPMSDAQFSPYVG-GMAFSPSS------- 402
+P+ SP S P G SP+Y SP+ SP +AQ Y ++SP+S
Sbjct: 1552 SPSYSPTS--PNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPT 1609
Query: 403 -------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPGYSPSSP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1610 SPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSP 1657
Score = 87.4 bits (215), Expect = 5e-16
Identities = 49/75 (65%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Frame = +1
Query: 304 SPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYS 480
SP+Y SPN++ SP S +SP G +SPSS P YSP+SP YSPTSP YSPTSP YS
Sbjct: 1595 SPSYSPTSPNVK-SPTSPG-YSPTSPG--YSPSS-PSYSPTSPNYSPTSPSYSPTSPNYS 1649
Query: 481 PTSPGYSPTSPTYSP 525
PTSP YSPTSP YSP
Sbjct: 1650 PTSPSYSPTSPNYSP 1664
Score = 87.4 bits (215), Expect = 5e-16
Identities = 49/96 (51%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVG--GMAFSPSSSPGYS 417
G +P+ S T + SP+Y SPN + S + SP ++SP+S P YS
Sbjct: 1619 GYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTS-PNYS 1677
Query: 418 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1678 PTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSP 1713
Score = 86.3 bits (212), Expect = 1e-15
Identities = 54/111 (48%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Frame = +1
Query: 202 AIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVG 378
A Q P+Y +P+ SP S P + SP Y SP S S + SP
Sbjct: 1583 AYNAQSPAYSP-----TSPSYSPTS--PNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYS 1635
Query: 379 --GMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
++SP+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1636 PTSPSYSPTS-PNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSP 1685
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/93 (50%), Positives = 56/93 (60%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P S + SPNY SP + +SP ++SP+S P YSP+S
Sbjct: 1612 GYSPTSPGYSPSSPSYSPTSPNY--SPTSPSYSPTSPNYSPT--SPSYSPTS-PNYSPTS 1666
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1667 PSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSP 1699
Score = 84.0 bits (206), Expect = 6e-15
Identities = 50/120 (41%), Positives = 58/120 (48%), Gaps = 18/120 (15%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
P + G TP S T SPN + + SP S + A SP+
Sbjct: 1531 PGFSPASPAGFTPTSPHYSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPA 1590
Query: 400 ------------------SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SPGYSP+SPGYSP+SP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1591 YSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSP 1650
Score = 80.9 bits (198), Expect = 5e-14
Identities = 47/88 (53%), Positives = 53/88 (60%), Gaps = 14/88 (15%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SPNY SP + +SP ++SP+S SP YSP+SP YSPTSP YSPT
Sbjct: 1659 SPNY--SPTSPSYSPTSPNYSPT--SPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1714
Query: 466 --------SPGYSPTSPGYSPTSPTYSP 525
SPGYSPTSPGYSPTSP YSP
Sbjct: 1715 ANGTSGPTSPGYSPTSPGYSPTSPGYSP 1742
Score = 71.6 bits (174), Expect = 3e-11
Identities = 41/76 (53%), Positives = 48/76 (63%), Gaps = 8/76 (10%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPT--------SPGYS 459
SPNY SP + +SP ++SP+S P YSP+SP YSPT SPGYS
Sbjct: 1673 SPNY--SPTSPSYSPTSPNYSPT--SPSYSPTS-PNYSPTSPSYSPTANGTSGPTSPGYS 1727
Query: 460 PTSPGYSPTSPGYSPT 507
PTSPGYSPTSPGYSP+
Sbjct: 1728 PTSPGYSPTSPGYSPS 1743
[133][TOP]
>UniRef100_O96446 DNA-directed RNA polymerase n=1 Tax=Vairimorpha necatrix
RepID=O96446_9MICR
Length = 1605
Score = 148 bits (373), Expect = 3e-34
Identities = 94/177 (53%), Positives = 106/177 (59%), Gaps = 2/177 (1%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+N+ G R SFEETVDILLDAA AE +G TENIM+G LAP+GTG L L
Sbjct: 1349 RHGVNKVGFGCTKRASFEETVDILLDAALVAEKYVTKGYTENIMMGHLAPLGTGIGNLLL 1408
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTP-ARSPVS-GTPYHEGMMSPNYLLSPNMRLSPMSD 354
+ L AI L P Y E TP SPVS G SP YL+ N R +P +
Sbjct: 1409 DVSKLDKAIPLSKPEY--NYEEVDTPFIHSPVSENLSISSGNWSPAYLVEGN-RYAPKTS 1465
Query: 355 AQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 1466 L----------YSPTS-PTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSP 1511
Score = 85.1 bits (209), Expect = 3e-15
Identities = 48/91 (52%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S T SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1499 SPTYSPTSPT---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1550
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1551 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1581
Score = 72.4 bits (176), Expect = 2e-11
Identities = 42/85 (49%), Positives = 52/85 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 1513 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 1564
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPT 507
YSPTSP YSPTSP YSPTSP YSPT
Sbjct: 1565 YSPTSPSYSPTSPSYSPTSPSYSPT 1589
[134][TOP]
>UniRef100_B4NDK9 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4NDK9_DROWI
Length = 1890
Score = 147 bits (372), Expect = 3e-34
Identities = 104/243 (42%), Positives = 122/243 (50%), Gaps = 68/243 (27%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 1408 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 1467
Query: 181 NDEMLKNAIEL----------------------------------QLPSYM--DGLEFGM 252
+ E + IE+ P Y G M
Sbjct: 1468 DAEKCRFGIEIPNTLGSAMMGGAAMFIGGGSTPSMTPPMTPWVNCNTPRYFSPQGHASSM 1527
Query: 253 TP--------ARSPVSG-----TPYHEGM--MSPNYLLSPNMRLSPMSDAQFSPYVGG-M 384
TP A S SG +P H G SP +SP SP +SP
Sbjct: 1528 TPGGPSFSPAAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPTSPSVSPSYSPTSPNYT 1587
Query: 385 AFSPS--SSPGYSPSSPGYSPTSPGYSPTSP--------------GYSPTSPGYSPTSPT 516
A SPS +SP YSPSSP YSPTSP Y+ TSP GYSP+S GYSPTSP
Sbjct: 1588 ASSPSGGASPNYSPSSPNYSPTSPLYAATSPRYASTTPNFNLQSTGYSPSSSGYSPTSPV 1647
Query: 517 YSP 525
YSP
Sbjct: 1648 YSP 1650
Score = 87.0 bits (214), Expect = 7e-16
Identities = 50/100 (50%), Positives = 61/100 (61%), Gaps = 7/100 (7%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSDAQFSPYVGGMAFSPSSS------ 405
G +P+ S S T SP Y + N + SP + + + Y G A+SPSSS
Sbjct: 1633 GYSPSSSGYSPT-------SPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYTPNS 1685
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP Y+P
Sbjct: 1686 PSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP 1725
Score = 79.0 bits (193), Expect = 2e-13
Identities = 46/97 (47%), Positives = 56/97 (57%), Gaps = 7/97 (7%)
Frame = +1
Query: 253 TPARSPVSG---TPYHEG----MMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPG 411
+P SP S +P G M SP SP+ + +SP ++SPSS P
Sbjct: 1645 SPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYTPNSPSYSPT--SPSYSPSS-PS 1701
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
YSP+SP YSPTSP YSPTSP Y+P +P YSPTSP YS
Sbjct: 1702 YSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS 1738
Score = 71.6 bits (174), Expect = 3e-11
Identities = 47/100 (47%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+TP+ SP S PNY SP+ SP S A G+ +SP+S SP
Sbjct: 1726 VTPSYSPTS----------PNYSASPHY--SPASPAYSQT---GVKYSPTSPTYSPPSPS 1770
Query: 412 Y--SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y SP SP Y+P SP YSP SP YSPTSP YSP+SP +SP
Sbjct: 1771 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSP 1810
Score = 70.9 bits (172), Expect = 5e-11
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S P H SP+ SP + ++SP + +SPSS+ YSP+SP
Sbjct: 1798 SPLYSPSS--PQH----SPSNQYSPTGSTYSATSPRYSPNMS--IYSPSSTK-YSPTSPT 1848
Query: 433 YSPTSPGYSPTSPGYSPTSPG-YSPTSPTYSP 525
Y+PT+ YSPTSP YSPT+P YSPTSP YSP
Sbjct: 1849 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1880
Score = 69.3 bits (168), Expect = 2e-10
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPG-YS 480
SP Y SPNM + S ++SP +SP Y+P++ YSPTSP YSPT+P YS
Sbjct: 1825 SPRY--SPNMSIYSPSSTKYSP----------TSPTYTPTARNYSPTSPMYSPTAPSHYS 1872
Query: 481 PTSPGYSPTSPTY 519
PTSP YSP+SPT+
Sbjct: 1873 PTSPAYSPSSPTF 1885
Score = 67.4 bits (163), Expect = 6e-10
Identities = 48/122 (39%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Frame = +1
Query: 259 ARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYS 438
A SP G + SPNY SP SP+ A Y S GYSPSS GYS
Sbjct: 1588 ASSPSGGASPNYSPSSPNY--SPT---SPLYAATSPRYASTTPNFNLQSTGYSPSSSGYS 1642
Query: 439 PTSPGYSPT---------------------------------SPGYSPTSPGYSPTSPTY 519
PTSP YSPT SP YSPTSP YSP+SP+Y
Sbjct: 1643 PTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYTPNSPSYSPTSPSYSPSSPSY 1702
Query: 520 SP 525
SP
Sbjct: 1703 SP 1704
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS------SSPGYSPSSPGYSPTSPGYSPT 465
SP Y SP L S Q SP +SP+ +SP YSP+ YSP+S YSPT
Sbjct: 1791 SPKY--SPTSPLYSPSSPQHSP---SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 1845
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP Y+PT+ YSPTSP YSP
Sbjct: 1846 SPTYTPTARNYSPTSPMYSP 1865
Score = 61.6 bits (148), Expect = 3e-08
Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLL-SPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA S T SP Y SP+ SP S Q++P G +SP+S P YSP+SP
Sbjct: 1744 SPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSP-QYTP--GSPQYSPAS-PKYSPTSP 1799
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP +SP++ YSPT YS TSP YSP
Sbjct: 1800 LYSPSSPQHSPSNQ-YSPTGSTYSATSPRYSP 1830
Score = 60.5 bits (145), Expect = 7e-08
Identities = 44/95 (46%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSP-YVGGMAFSPSSSPGYSPSS 426
+P+ SP S P + SP+Y SPN S + SP Y +SP+S P YS +
Sbjct: 1699 SPSYSPTS--PCYSPT-SPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPAS-PAYSQTG 1754
Query: 427 PGYSPTSPGYSPTSPGY--SPTSPGYSPTSPTYSP 525
YSPTSP YSP SP Y SP SP Y+P SP YSP
Sbjct: 1755 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1789
[135][TOP]
>UniRef100_B4MAN9 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4MAN9_DROVI
Length = 1889
Score = 147 bits (372), Expect = 3e-34
Identities = 102/242 (42%), Positives = 122/242 (50%), Gaps = 67/242 (27%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 1408 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 1467
Query: 181 NDEMLKNAIEL----------------------------------QLPSYM--DGLEFGM 252
+ E + IE+ P Y G GM
Sbjct: 1468 DAEKCRFGIEIPNSLGSSMLGGAAIFMGGGSTPSMTPPMTPWVNCHTPRYFSPSGHVSGM 1527
Query: 253 TP--------ARSPVSG-----TPYHEGM--MSPNYLLSPNMRLSPMSDAQFSPYVGG-M 384
TP A S SG +P H G SP +SP+ SP +SP
Sbjct: 1528 TPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPHFSTSPSVSPSYSPTSPNYT 1587
Query: 385 AFSP-SSSPGYSPSSPGYSPTS--------------PGYSPTSPGYSPTSPGYSPTSPTY 519
A SP +SP YSPSSP YSPTS P ++P S GYSP+S GYSPTSP Y
Sbjct: 1588 ASSPGGASPNYSPSSPNYSPTSPLYTATSLRYASATPNFNPQSTGYSPSSSGYSPTSPVY 1647
Query: 520 SP 525
SP
Sbjct: 1648 SP 1649
Score = 86.3 bits (212), Expect = 1e-15
Identities = 50/100 (50%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSDAQFSPYVGGMAFSPSSS------ 405
G +P+ S S T SP Y + N + SP + + + Y G A+SPSSS
Sbjct: 1632 GYSPSSSGYSPT-------SPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSSNS 1684
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP SP YSP+SP YSPTSP YSPTSP YSPTSP Y+P
Sbjct: 1685 PSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP 1724
Score = 79.7 bits (195), Expect = 1e-13
Identities = 48/96 (50%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Frame = +1
Query: 253 TPARSPVSG---TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS---SSPGY 414
+P SP S +P G S Y SP SP S S SPS SSP Y
Sbjct: 1644 SPVYSPTSNFQSSPSFAGSGSNMY--SPGNAYSPSSSNYSSNSPSYSPMSPSYSPSSPSY 1701
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
SP+SP YSPTSP YSPTSP Y+P +P YSPTSP YS
Sbjct: 1702 SPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYS 1737
Score = 73.9 bits (180), Expect = 6e-12
Identities = 50/104 (48%), Positives = 60/104 (57%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVS-----GTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS----- 402
+P+ SP S TP + SPNY SP+ SP S A G+ +SP+S
Sbjct: 1712 SPSYSPTSPNYTPATPSYSPT-SPNYSASPHY--SPASPAYSQT---GVKYSPTSPTYSP 1765
Query: 403 -SPGY--SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP Y SP SP Y+P SP YSPTSP YSPTSP YSP+SP +SP
Sbjct: 1766 PSPSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSP 1809
Score = 70.9 bits (172), Expect = 5e-11
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S P H SP+ SP + ++SP + +SPSS+ YSP+SP
Sbjct: 1797 SPLYSPSS--PQH----SPSNQYSPTGSTYSATSPRYSPNMS--IYSPSSTK-YSPTSPT 1847
Query: 433 YSPTSPGYSPTSPGYSPTSPG-YSPTSPTYSP 525
Y+PT+ YSPTSP YSPT+P YSPTSP YSP
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Score = 69.3 bits (168), Expect = 2e-10
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPG-YS 480
SP Y SPNM + S ++SP +SP Y+P++ YSPTSP YSPT+P YS
Sbjct: 1824 SPRY--SPNMSIYSPSSTKYSP----------TSPTYTPTARNYSPTSPMYSPTAPSHYS 1871
Query: 481 PTSPGYSPTSPTY 519
PTSP YSP+SPT+
Sbjct: 1872 PTSPAYSPSSPTF 1884
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS------SSPGYSPSSPGYSPTSPGYSPT 465
SP Y SP L S Q SP +SP+ +SP YSP+ YSP+S YSPT
Sbjct: 1790 SPKY--SPTSPLYSPSSPQHSP---SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 1844
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP Y+PT+ YSPTSP YSP
Sbjct: 1845 SPTYTPTARNYSPTSPMYSP 1864
Score = 61.6 bits (148), Expect = 3e-08
Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLL-SPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA S T SP Y SP+ SP S Q++P G +SP+S P YSP+SP
Sbjct: 1743 SPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSP-QYTP--GSPQYSPTS-PKYSPTSP 1798
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP +SP++ YSPT YS TSP YSP
Sbjct: 1799 LYSPSSPQHSPSNQ-YSPTGSTYSATSPRYSP 1829
[136][TOP]
>UniRef100_Q1WKU3 Putative RNA polymerase II 215 kD subunit (Fragment) n=1
Tax=Drosophila orena RepID=Q1WKU3_DROOR
Length = 750
Score = 146 bits (369), Expect = 8e-34
Identities = 97/210 (46%), Positives = 125/210 (59%), Gaps = 35/210 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 550 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 609
Query: 181 NDEMLKNAIEL--QLPSYMDG-----LEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRL 339
+ E + IE+ L S M G + G TP+ +P TP+ + +P Y SP +
Sbjct: 610 DAEKCRFGIEIPNTLGSSMLGGAAMFIGGGSTPSMTPPM-TPW-DNCNTPRY-FSPPGHV 666
Query: 340 SPMSDAQFSPYVGGMAFSPSS-------SPGYSPSSPGYSPTSPG--------------- 453
S M+ GG +FSPS+ SP +SP+ PG SP+SPG
Sbjct: 667 SAMTP-------GGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 719
Query: 454 -YSPTSPGYSPTSPG-----YSPTSPTYSP 525
YSPTSP Y+ +SPG YSP+SP YSP
Sbjct: 720 SYSPTSPNYTASSPGGASPNYSPSSPNYSP 749
[137][TOP]
>UniRef100_B4L732 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4L732_DROMO
Length = 1889
Score = 146 bits (369), Expect = 8e-34
Identities = 97/210 (46%), Positives = 125/210 (59%), Gaps = 35/210 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 1408 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 1467
Query: 181 NDEMLKNAIEL--QLPSYMDG-----LEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRL 339
+ E + IE+ L S M G + G TP+ +P TP+ +P Y SP+ +
Sbjct: 1468 DAEKCRFGIEIPNSLGSSMLGGAAIFMGGGSTPSMTPPM-TPW-VNCHTPRY-FSPSGHV 1524
Query: 340 SPMSDAQFSPYVGGMAFSPSS-------SPGYSPSSPGYSPTSPG--------------- 453
S M+ GG +FSPS+ SP +SP+ PG SP+SPG
Sbjct: 1525 SAMTP-------GGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577
Query: 454 -YSPTSPGYSPTSPG-----YSPTSPTYSP 525
YSPTSP Y+ +SPG YSP+SP YSP
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSP 1607
Score = 84.3 bits (207), Expect = 5e-15
Identities = 50/107 (46%), Positives = 61/107 (57%), Gaps = 14/107 (13%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSDAQFSPYVGGMAFSPSSS------ 405
G +P+ S S T SP Y + N + SP + + + Y G A+SPSSS
Sbjct: 1632 GYSPSSSGYSPT-------SPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNS 1684
Query: 406 -------PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPSSP YSPTSP YSPTSP YSPTSP Y+P +P+YSP
Sbjct: 1685 PSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSP 1731
Score = 79.3 bits (194), Expect = 1e-13
Identities = 46/97 (47%), Positives = 56/97 (57%), Gaps = 7/97 (7%)
Frame = +1
Query: 253 TPARSPVSG---TPYHEG----MMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPG 411
+P SP S +P G M SP SP+ + +SP ++SPSS P
Sbjct: 1644 SPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSPM--SPSYSPSS-PS 1700
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
YSP+SP YSPTSP YSPTSP Y+P +P YSPTSP YS
Sbjct: 1701 YSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS 1737
Score = 71.6 bits (174), Expect = 3e-11
Identities = 47/100 (47%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+TP+ SP S PNY SP+ SP S A G+ +SP+S SP
Sbjct: 1725 VTPSYSPTS----------PNYSASPHY--SPASPAYSQT---GVKYSPTSPTYSPPSPS 1769
Query: 412 Y--SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y SP SP Y+P SP YSP SP YSPTSP YSP+SP +SP
Sbjct: 1770 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSP 1809
Score = 70.9 bits (172), Expect = 5e-11
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S P H SP+ SP + ++SP + +SPSS+ YSP+SP
Sbjct: 1797 SPLYSPSS--PQH----SPSNQYSPTGSTYSATSPRYSPNMS--IYSPSSTK-YSPTSPT 1847
Query: 433 YSPTSPGYSPTSPGYSPTSPG-YSPTSPTYSP 525
Y+PT+ YSPTSP YSPT+P YSPTSP YSP
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Score = 69.3 bits (168), Expect = 2e-10
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPG-YS 480
SP Y SPNM + S ++SP +SP Y+P++ YSPTSP YSPT+P YS
Sbjct: 1824 SPRY--SPNMSIYSPSSTKYSP----------TSPTYTPTARNYSPTSPMYSPTAPSHYS 1871
Query: 481 PTSPGYSPTSPTY 519
PTSP YSP+SPT+
Sbjct: 1872 PTSPAYSPSSPTF 1884
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS------SSPGYSPSSPGYSPTSPGYSPT 465
SP Y SP L S Q SP +SP+ +SP YSP+ YSP+S YSPT
Sbjct: 1790 SPKY--SPTSPLYSPSSPQHSP---SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 1844
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP Y+PT+ YSPTSP YSP
Sbjct: 1845 SPTYTPTARNYSPTSPMYSP 1864
Score = 61.6 bits (148), Expect = 3e-08
Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLL-SPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA S T SP Y SP+ SP S Q++P G +SP+S P YSP+SP
Sbjct: 1743 SPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSP-QYTP--GSPQYSPAS-PKYSPTSP 1798
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP +SP++ YSPT YS TSP YSP
Sbjct: 1799 LYSPSSPQHSPSNQ-YSPTGSTYSATSPRYSP 1829
Score = 60.8 bits (146), Expect = 5e-08
Identities = 45/100 (45%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Frame = +1
Query: 250 MTPARSP----VSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSP-YVGGMAFSPSSSPG 411
M+P+ SP S T SP+Y SPN S + SP Y +SP+S P
Sbjct: 1690 MSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPAS-PA 1748
Query: 412 YSPSSPGYSPTSPGYSPTSPGY--SPTSPGYSPTSPTYSP 525
YS + YSPTSP YSP SP Y SP SP Y+P SP YSP
Sbjct: 1749 YSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1788
[138][TOP]
>UniRef100_B4JXA6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4JXA6_DROGR
Length = 1889
Score = 146 bits (368), Expect = 1e-33
Identities = 102/242 (42%), Positives = 123/242 (50%), Gaps = 67/242 (27%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 1408 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 1467
Query: 181 NDEMLKNAIEL--QLPSYMDG-----LEFGMTPARSP----------------------- 270
+ E + IE+ L S M G + G TP+ +P
Sbjct: 1468 DAEKCRFGIEIPNSLGSSMLGGAAIFMGGGSTPSMTPPMTPWVNCHTPRYFSPPGHVSAM 1527
Query: 271 -------------------VSGTPYHEGM--MSPNYLLSPNMRLSPMSDAQFSPYVGG-M 384
S +P H G SP +SP SP +SP
Sbjct: 1528 TPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYT 1587
Query: 385 AFSP-SSSPGYSPSSPGYSPTSPGYSPTSP--------------GYSPTSPGYSPTSPTY 519
A SP +SP YSPSSP YSPTSP Y+ TSP GYSP+S GYSPTSP Y
Sbjct: 1588 ASSPGGASPNYSPSSPNYSPTSPLYTATSPRYASATPNFNAQSTGYSPSSSGYSPTSPVY 1647
Query: 520 SP 525
SP
Sbjct: 1648 SP 1649
Score = 85.1 bits (209), Expect = 3e-15
Identities = 49/94 (52%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSDAQFSPYVGGMAFSPSSSPGYSPS 423
G +P+ S S T SP Y + N + SP + + + Y G A+SPSSS YSP+
Sbjct: 1632 GYSPSSSGYSPT-------SPVYSPTSNFQSSPSFAGSGSNLYSPGNAYSPSSS-NYSPN 1683
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSP SP YSP+SP YSPTSP YSPTSP+YSP
Sbjct: 1684 SPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSP 1717
Score = 75.5 bits (184), Expect = 2e-12
Identities = 48/97 (49%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Frame = +1
Query: 253 TPARSPVSG---TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMA-FSPS---SSPG 411
+P SP S +P G S + L SP SP S + +SP + SPS SSP
Sbjct: 1644 SPVYSPTSNFQSSPSFAG--SGSNLYSPGNAYSP-SSSNYSPNSPSYSPMSPSYSPSSPS 1700
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
YSP+SP YSPTSP YSPTSP Y+ +P YSPTSP YS
Sbjct: 1701 YSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYS 1737
Score = 71.6 bits (174), Expect = 3e-11
Identities = 47/100 (47%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+TP+ SP S PNY SP+ SP S A G+ +SP+S SP
Sbjct: 1725 VTPSYSPTS----------PNYSASPHY--SPASPAYSQT---GVKYSPTSPTYSPPSPS 1769
Query: 412 Y--SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y SP SP Y+P SP YSP SP YSPTSP YSP+SP +SP
Sbjct: 1770 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSP 1809
Score = 70.9 bits (172), Expect = 5e-11
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S P H SP+ SP + ++SP + +SPSS+ YSP+SP
Sbjct: 1797 SPLYSPSS--PQH----SPSNQYSPTGSTYSATSPRYSPNMS--IYSPSSTK-YSPTSPT 1847
Query: 433 YSPTSPGYSPTSPGYSPTSPG-YSPTSPTYSP 525
Y+PT+ YSPTSP YSPT+P YSPTSP YSP
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Score = 69.3 bits (168), Expect = 2e-10
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPG-YS 480
SP Y SPNM + S ++SP +SP Y+P++ YSPTSP YSPT+P YS
Sbjct: 1824 SPRY--SPNMSIYSPSSTKYSP----------TSPTYTPTARNYSPTSPMYSPTAPSHYS 1871
Query: 481 PTSPGYSPTSPTY 519
PTSP YSP+SPT+
Sbjct: 1872 PTSPAYSPSSPTF 1884
Score = 68.9 bits (167), Expect = 2e-10
Identities = 50/115 (43%), Positives = 57/115 (49%), Gaps = 23/115 (20%)
Frame = +1
Query: 250 MTPARSPVSG--TPYHEGMMSPNYL-LSPNMR-LSPMSDAQFSPYVGGMAFSPSSSPGYS 417
++P+ SP S T G SPNY SPN SP+ A Y + S GYS
Sbjct: 1575 VSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSPRYASATPNFNAQSTGYS 1634
Query: 418 PSSPGYSPTSPGYSPT-----------------SPG--YSPTSPGYSPTSPTYSP 525
PSS GYSPTSP YSPT SPG YSP+S YSP SP+YSP
Sbjct: 1635 PSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNLYSPGNAYSPSSSNYSPNSPSYSP 1689
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS------SSPGYSPSSPGYSPTSPGYSPT 465
SP Y SP L S Q SP +SP+ +SP YSP+ YSP+S YSPT
Sbjct: 1790 SPKY--SPTSPLYSPSSPQHSP---SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 1844
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP Y+PT+ YSPTSP YSP
Sbjct: 1845 SPTYTPTARNYSPTSPMYSP 1864
Score = 61.6 bits (148), Expect = 3e-08
Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLL-SPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA S T SP Y SP+ SP S Q++P G +SP+S P YSP+SP
Sbjct: 1743 SPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSP-QYTP--GSPQYSPAS-PKYSPTSP 1798
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP +SP++ YSPT YS TSP YSP
Sbjct: 1799 LYSPSSPQHSPSNQ-YSPTGSTYSATSPRYSP 1829
Score = 59.3 bits (142), Expect = 2e-07
Identities = 44/100 (44%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Frame = +1
Query: 250 MTPARSP----VSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSP-YVGGMAFSPSSSPG 411
M+P+ SP S T SP+Y SP S + SP Y +SP+S P
Sbjct: 1690 MSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYSASPHYSPAS-PA 1748
Query: 412 YSPSSPGYSPTSPGYSPTSPGY--SPTSPGYSPTSPTYSP 525
YS + YSPTSP YSP SP Y SP SP Y+P SP YSP
Sbjct: 1749 YSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1788
[139][TOP]
>UniRef100_B3MQ29 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MQ29_DROAN
Length = 1889
Score = 146 bits (368), Expect = 1e-33
Identities = 103/242 (42%), Positives = 121/242 (50%), Gaps = 67/242 (27%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 1408 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 1467
Query: 181 NDEMLKNAIEL----------------------------------QLPSYMD--GLEFGM 252
+ E + IE+ P Y G M
Sbjct: 1468 DAEKCRFGIEIPNTLGSSMLGGAAMFIGGGSTPSMTPPMTPWVNCNTPRYFSPPGHVSAM 1527
Query: 253 TP--------ARSPVSG-----TPYHEGM--MSPNYLLSPNMRLSPMSDAQFSPYVGG-M 384
TP A S SG +P H G SP +SP SP +SP
Sbjct: 1528 TPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYT 1587
Query: 385 AFSP-SSSPGYSPSSPGYSPTSPGYSPTSP--------------GYSPTSPGYSPTSPTY 519
A SP +SP YSPSSP YSPTSP Y+ TSP GYSP+S GYSPTSP Y
Sbjct: 1588 ASSPGGASPNYSPSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVY 1647
Query: 520 SP 525
SP
Sbjct: 1648 SP 1649
Score = 86.7 bits (213), Expect = 9e-16
Identities = 50/100 (50%), Positives = 61/100 (61%), Gaps = 7/100 (7%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSDAQFSPYVGGMAFSPSSS------ 405
G +P+ S S T SP Y + N + SP + + + Y G A+SPSSS
Sbjct: 1632 GYSPSSSGYSPT-------SPVYSPTSNYQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNS 1684
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP Y+P
Sbjct: 1685 PSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP 1724
Score = 84.0 bits (206), Expect = 6e-15
Identities = 49/94 (52%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSG---TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPS 423
+P SP S +P G S Y SP SP S + +SP ++SP+S P YSPS
Sbjct: 1644 SPVYSPTSNYQSSPSFAGSGSNMY--SPGNAYSP-SSSNYSP--NSPSYSPTS-PSYSPS 1697
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP YSPTSP Y+P +P+YSP
Sbjct: 1698 SPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSP 1731
Score = 71.6 bits (174), Expect = 3e-11
Identities = 47/100 (47%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+TP+ SP S PNY SP+ SP S A G+ +SP+S SP
Sbjct: 1725 VTPSYSPTS----------PNYSASPHY--SPASPAYSQT---GVKYSPTSPTYSPPSPS 1769
Query: 412 Y--SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y SP SP Y+P SP YSP SP YSPTSP YSP+SP +SP
Sbjct: 1770 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSP 1809
Score = 70.9 bits (172), Expect = 5e-11
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S P H SP+ SP + ++SP + +SPSS+ YSP+SP
Sbjct: 1797 SPLYSPSS--PQH----SPSNQYSPTGSTYSATSPRYSPNMS--IYSPSSTK-YSPTSPT 1847
Query: 433 YSPTSPGYSPTSPGYSPTSPG-YSPTSPTYSP 525
Y+PT+ YSPTSP YSPT+P YSPTSP YSP
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Score = 69.3 bits (168), Expect = 2e-10
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPG-YS 480
SP Y SPNM + S ++SP +SP Y+P++ YSPTSP YSPT+P YS
Sbjct: 1824 SPRY--SPNMSIYSPSSTKYSP----------TSPTYTPTARNYSPTSPMYSPTAPSHYS 1871
Query: 481 PTSPGYSPTSPTY 519
PTSP YSP+SPT+
Sbjct: 1872 PTSPAYSPSSPTF 1884
Score = 66.6 bits (161), Expect = 1e-09
Identities = 42/93 (45%), Positives = 50/93 (53%), Gaps = 19/93 (20%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
S NY SPN + +SP ++SP+S SP YSP+SP Y+P +P YSPT
Sbjct: 1677 SSNY--SPNSPSYSPTSPSYSP--SSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPT 1732
Query: 466 SPG------YSPTSPG-------YSPTSPTYSP 525
SP YSP SP YSPTSPTYSP
Sbjct: 1733 SPNYSASPHYSPASPAYSQTGVKYSPTSPTYSP 1765
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS------SSPGYSPSSPGYSPTSPGYSPT 465
SP Y SP L S Q SP +SP+ +SP YSP+ YSP+S YSPT
Sbjct: 1790 SPKY--SPTSPLYSPSSPQHSP---SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 1844
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP Y+PT+ YSPTSP YSP
Sbjct: 1845 SPTYTPTARNYSPTSPMYSP 1864
Score = 61.6 bits (148), Expect = 3e-08
Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLL-SPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA S T SP Y SP+ SP S Q++P G +SP+S P YSP+SP
Sbjct: 1743 SPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSP-QYTP--GSPQYSPAS-PKYSPTSP 1798
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP +SP++ YSPT YS TSP YSP
Sbjct: 1799 LYSPSSPQHSPSNQ-YSPTGSTYSATSPRYSP 1829
Score = 60.5 bits (145), Expect = 7e-08
Identities = 44/95 (46%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSP-YVGGMAFSPSSSPGYSPSS 426
+P+ SP S P + SP+Y SPN S + SP Y +SP+S P YS +
Sbjct: 1698 SPSYSPTS--PCYSPT-SPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPAS-PAYSQTG 1753
Query: 427 PGYSPTSPGYSPTSPGY--SPTSPGYSPTSPTYSP 525
YSPTSP YSP SP Y SP SP Y+P SP YSP
Sbjct: 1754 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1788
[140][TOP]
>UniRef100_A6SI63 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10
RepID=A6SI63_BOTFB
Length = 1742
Score = 145 bits (367), Expect = 1e-33
Identities = 97/219 (44%), Positives = 123/219 (56%), Gaps = 44/219 (20%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILL+AAA E D RG++EN+MLGQLAP+GTG+ ++ L
Sbjct: 1409 RHGINRADTGALMRCSFEETVEILLEAAAVGELDDCRGISENVMLGQLAPMGTGEMDVLL 1468
Query: 181 NDEMLKNAIE------LQLPSYMDGLEFGMTPARSPVSG-TPYHEGMMSPNYLLSPN--M 333
+ +ML+ I L + G E G A +P G +P +EG YL +P+
Sbjct: 1469 DPKMLETVISDNSRMGLMAGIPVKGSEGG---AATPYDGQSPLNEG----GYLGTPDYGA 1521
Query: 334 RLSPMSDA----------------QFSPYVGGM-----AFSPSSSPGYSPSSPGYSPTSP 450
+ SP+ A SPY G +SP+S SPSSP +SP+SP
Sbjct: 1522 QFSPIQSAGSDTPSGFATEYSGLGGMSPYAAGSRSPGGGYSPTSPFNASPSSPNFSPSSP 1581
Query: 451 GYSPT--------SPGY------SPTSPGYSPTSPTYSP 525
GYSPT SPGY SP SP ++PTSP YSP
Sbjct: 1582 GYSPTSPMMGGGASPGYAVSPRFSPVSPAFTPTSPAYSP 1620
Score = 87.8 bits (216), Expect = 4e-16
Identities = 55/100 (55%), Positives = 62/100 (62%), Gaps = 9/100 (9%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS-------SPG 411
+P SP S P G SP Y +SP R SP+S A F+P A+SP+S SP
Sbjct: 1580 SPGYSPTS--PMMGGGASPGYAVSP--RFSPVSPA-FTPT--SPAYSPTSPSFVSPTSPS 1632
Query: 412 YSPSSPGYSPTSPGY--SPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSP SPTSP YSPTSP YSPTSP YSP
Sbjct: 1633 YSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSP 1672
Score = 71.2 bits (173), Expect = 4e-11
Identities = 53/122 (43%), Positives = 59/122 (48%), Gaps = 31/122 (25%)
Frame = +1
Query: 253 TPARSP-----VSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQF----------------S 366
+PA SP VS T SPNY SPN+ SP S + S
Sbjct: 1615 SPAYSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTS 1674
Query: 367 PYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSP---------TSPGYSPTSPGYSPTSPTY 519
P G SP S G SP+SP YSPTSP +SP TSP YSPTSP YSPTSP +
Sbjct: 1675 PNYAGNKVSPGS--GLSPTSPVYSPTSPNWSPSSPQHQGNSTSPKYSPTSPSYSPTSPNF 1732
Query: 520 SP 525
SP
Sbjct: 1733 SP 1734
[141][TOP]
>UniRef100_Q1WKU4 Putative RNA polymerase II 215 kD subunit (Fragment) n=1
Tax=Drosophila erecta RepID=Q1WKU4_DROER
Length = 760
Score = 145 bits (366), Expect = 2e-33
Identities = 97/210 (46%), Positives = 124/210 (59%), Gaps = 35/210 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 550 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 609
Query: 181 NDEMLKNAIEL--QLPSYMDG-----LEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRL 339
+ E + IE+ L S M G + G TP+ +P TP+ +P Y SP +
Sbjct: 610 DAEKCRFGIEIPNTLGSSMLGGAAMFIGGGSTPSMTPPM-TPW-ANCNTPRY-FSPPGHV 666
Query: 340 SPMSDAQFSPYVGGMAFSPSS-------SPGYSPSSPGYSPTSPG--------------- 453
S M+ GG +FSPS+ SP +SP+ PG SP+SPG
Sbjct: 667 SAMTP-------GGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 719
Query: 454 -YSPTSPGYSPTSPG-----YSPTSPTYSP 525
YSPTSP Y+ +SPG YSP+SP YSP
Sbjct: 720 SYSPTSPNYTASSPGGASPNYSPSSPNYSP 749
[142][TOP]
>UniRef100_B3NUC1 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NUC1_DROER
Length = 1889
Score = 145 bits (366), Expect = 2e-33
Identities = 97/210 (46%), Positives = 124/210 (59%), Gaps = 35/210 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 1408 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 1467
Query: 181 NDEMLKNAIEL--QLPSYMDG-----LEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRL 339
+ E + IE+ L S M G + G TP+ +P TP+ +P Y SP +
Sbjct: 1468 DAEKCRFGIEIPNTLGSSMLGGAAMFIGGGSTPSMTPPM-TPW-ANCNTPRY-FSPPGHV 1524
Query: 340 SPMSDAQFSPYVGGMAFSPSS-------SPGYSPSSPGYSPTSPG--------------- 453
S M+ GG +FSPS+ SP +SP+ PG SP+SPG
Sbjct: 1525 SAMTP-------GGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577
Query: 454 -YSPTSPGYSPTSPG-----YSPTSPTYSP 525
YSPTSP Y+ +SPG YSP+SP YSP
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSP 1607
Score = 85.9 bits (211), Expect = 2e-15
Identities = 49/99 (49%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNY------LLSPNMRLSPMSDAQFSPYVGGMAFSPSSSP 408
G +P S TP+ + SP++ + SP SP S A +SP ++SP+S P
Sbjct: 1639 GYSPTSPVYSPTPHFQS--SPSFAGSGSNIYSPANAYSP-SSANYSP--NSPSYSPTS-P 1692
Query: 409 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPSSP YSPTSP YSPTSP YSPTSP Y+P +P+YSP
Sbjct: 1693 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSP 1731
Score = 85.5 bits (210), Expect = 2e-15
Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 7/100 (7%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSDAQFSPYVGGMAFSPSS------S 405
G +P+ S S T SP Y +P+ + SP + + + Y A+SPSS S
Sbjct: 1632 GYSPSSSGYSPT-------SPVYSPTPHFQSSPSFAGSGSNIYSPANAYSPSSANYSPNS 1684
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP Y+P
Sbjct: 1685 PSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP 1724
Score = 71.6 bits (174), Expect = 3e-11
Identities = 47/100 (47%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+TP+ SP S PNY SP+ SP S A G+ +SP+S SP
Sbjct: 1725 VTPSYSPTS----------PNYSASPHY--SPASPAYSQT---GVKYSPTSPTYSPPSPS 1769
Query: 412 Y--SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y SP SP Y+P SP YSP SP YSPTSP YSP+SP +SP
Sbjct: 1770 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSP 1809
Score = 70.9 bits (172), Expect = 5e-11
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S P H SP+ SP + ++SP + +SPSS+ YSP+SP
Sbjct: 1797 SPLYSPSS--PQH----SPSNQYSPTGSTYSATSPRYSPNMS--IYSPSSTK-YSPTSPT 1847
Query: 433 YSPTSPGYSPTSPGYSPTSPG-YSPTSPTYSP 525
Y+PT+ YSPTSP YSPT+P YSPTSP YSP
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Score = 69.3 bits (168), Expect = 2e-10
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPG-YS 480
SP Y SPNM + S ++SP +SP Y+P++ YSPTSP YSPT+P YS
Sbjct: 1824 SPRY--SPNMSIYSPSSTKYSP----------TSPTYTPTARNYSPTSPMYSPTAPSHYS 1871
Query: 481 PTSPGYSPTSPTY 519
PTSP YSP+SPT+
Sbjct: 1872 PTSPAYSPSSPTF 1884
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS------SSPGYSPSSPGYSPTSPGYSPT 465
SP Y SP L S Q SP +SP+ +SP YSP+ YSP+S YSPT
Sbjct: 1790 SPKY--SPTSPLYSPSSPQHSP---SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 1844
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP Y+PT+ YSPTSP YSP
Sbjct: 1845 SPTYTPTARNYSPTSPMYSP 1864
Score = 61.6 bits (148), Expect = 3e-08
Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLL-SPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA S T SP Y SP+ SP S Q++P G +SP+S P YSP+SP
Sbjct: 1743 SPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSP-QYTP--GSPQYSPAS-PKYSPTSP 1798
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP +SP++ YSPT YS TSP YSP
Sbjct: 1799 LYSPSSPQHSPSNQ-YSPTGSTYSATSPRYSP 1829
Score = 60.5 bits (145), Expect = 7e-08
Identities = 44/95 (46%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSP-YVGGMAFSPSSSPGYSPSS 426
+P+ SP S P + SP+Y SPN S + SP Y +SP+S P YS +
Sbjct: 1698 SPSYSPTS--PCYSPT-SPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPAS-PAYSQTG 1753
Query: 427 PGYSPTSPGYSPTSPGY--SPTSPGYSPTSPTYSP 525
YSPTSP YSP SP Y SP SP Y+P SP YSP
Sbjct: 1754 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1788
[143][TOP]
>UniRef100_A7EKT1 DNA-directed RNA polymerase n=2 Tax=Sclerotinia sclerotiorum
RepID=A7EKT1_SCLS1
Length = 1746
Score = 145 bits (366), Expect = 2e-33
Identities = 102/241 (42%), Positives = 124/241 (51%), Gaps = 66/241 (27%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILL+AAA E D RG++EN+MLGQLAP+GTG+ ++ L
Sbjct: 1409 RHGINRADTGALMRCSFEETVEILLEAAAVGELDDCRGISENVMLGQLAPMGTGEMDVLL 1468
Query: 181 NDEMLKNAIE-----------------------------LQLPSYMDGLEFG--MTPARS 267
+ +ML+ I L Y+ ++G +P +S
Sbjct: 1469 DPKMLETVISDNSRMGLMAGIPVKGGEGGAATPYDGQSPLNEGGYLGTPDYGAAFSPIQS 1528
Query: 268 PVSGT-------------------PYHEGMMSPNYLLSPN--MRLSPMSDAQFSPYVGGM 384
S T PY G SP SP SP S QFSP G
Sbjct: 1529 AGSETPSGFATEYGGSLGFGGGMSPYGAGSRSPGGGYSPTSPFNASPTS-PQFSPSSPG- 1586
Query: 385 AFSPSS-------SPGY------SPSSPGYSPTSPGYSPTSPGY-SPTSPGYSPTSPTYS 522
+SP+S SPGY SP SP ++PTSP YSPTSP + SPTSP YSPTSP YS
Sbjct: 1587 -YSPTSPMMGGGASPGYSVSPRFSPVSPAFTPTSPAYSPTSPSFVSPTSPSYSPTSPNYS 1645
Query: 523 P 525
P
Sbjct: 1646 P 1646
Score = 87.4 bits (215), Expect = 5e-16
Identities = 55/100 (55%), Positives = 62/100 (62%), Gaps = 9/100 (9%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS-------SPG 411
+P SP S P G SP Y +SP R SP+S A F+P A+SP+S SP
Sbjct: 1584 SPGYSPTS--PMMGGGASPGYSVSP--RFSPVSPA-FTPT--SPAYSPTSPSFVSPTSPS 1636
Query: 412 YSPSSPGYSPTSPGY--SPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSP SPTSP YSPTSP YSPTSP YSP
Sbjct: 1637 YSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSP 1676
Score = 71.2 bits (173), Expect = 4e-11
Identities = 53/122 (43%), Positives = 59/122 (48%), Gaps = 31/122 (25%)
Frame = +1
Query: 253 TPARSP-----VSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQF----------------S 366
+PA SP VS T SPNY SPN+ SP S + S
Sbjct: 1619 SPAYSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTS 1678
Query: 367 PYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSP---------TSPGYSPTSPGYSPTSPTY 519
P G SP S G SP+SP YSPTSP +SP TSP YSPTSP YSPTSP +
Sbjct: 1679 PNYAGNKVSPGS--GLSPTSPVYSPTSPNWSPSSPQHQGNNTSPKYSPTSPSYSPTSPNF 1736
Query: 520 SP 525
SP
Sbjct: 1737 SP 1738
[144][TOP]
>UniRef100_Q1WKU0 Putative RNA polymerase II 215 kD subunit (Fragment) n=2
Tax=melanogaster subgroup RepID=Q1WKU0_DROYA
Length = 766
Score = 145 bits (365), Expect = 2e-33
Identities = 97/210 (46%), Positives = 124/210 (59%), Gaps = 35/210 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 550 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 609
Query: 181 NDEMLKNAIEL--QLPSYMDG-----LEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRL 339
+ E + IE+ L S M G + G TP+ +P TP+ +P Y SP +
Sbjct: 610 DAEKCRFGIEIPNTLGSSMLGGAAMFIGGGSTPSMTPPM-TPW-VNCNTPRY-FSPPGHV 666
Query: 340 SPMSDAQFSPYVGGMAFSPSS-------SPGYSPSSPGYSPTSPG--------------- 453
S M+ GG +FSPS+ SP +SP+ PG SP+SPG
Sbjct: 667 SAMTP-------GGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 719
Query: 454 -YSPTSPGYSPTSPG-----YSPTSPTYSP 525
YSPTSP Y+ +SPG YSP+SP YSP
Sbjct: 720 SYSPTSPNYTASSPGGASPNYSPSSPNYSP 749
[145][TOP]
>UniRef100_B4PY98 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PY98_DROYA
Length = 1889
Score = 145 bits (365), Expect = 2e-33
Identities = 97/210 (46%), Positives = 124/210 (59%), Gaps = 35/210 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 1408 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 1467
Query: 181 NDEMLKNAIEL--QLPSYMDG-----LEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRL 339
+ E + IE+ L S M G + G TP+ +P TP+ +P Y SP +
Sbjct: 1468 DAEKCRFGIEIPNTLGSSMLGGAAMFIGGGSTPSMTPPM-TPW-VNCNTPRY-FSPPGHV 1524
Query: 340 SPMSDAQFSPYVGGMAFSPSS-------SPGYSPSSPGYSPTSPG--------------- 453
S M+ GG +FSPS+ SP +SP+ PG SP+SPG
Sbjct: 1525 SAMTP-------GGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577
Query: 454 -YSPTSPGYSPTSPG-----YSPTSPTYSP 525
YSPTSP Y+ +SPG YSP+SP YSP
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSP 1607
Score = 89.7 bits (221), Expect = 1e-16
Identities = 51/100 (51%), Positives = 62/100 (62%), Gaps = 7/100 (7%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSDAQFSPYVGGMAFSPSSS------ 405
G +P+ S S T SP Y +PN + SP + + + Y G A+SPSSS
Sbjct: 1632 GYSPSSSGYSPT-------SPVYSPTPNFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNS 1684
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP Y+P
Sbjct: 1685 PSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP 1724
Score = 71.6 bits (174), Expect = 3e-11
Identities = 47/100 (47%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+TP+ SP S PNY SP+ SP S A G+ +SP+S SP
Sbjct: 1725 VTPSYSPTS----------PNYSASPHY--SPASPAYSQT---GVKYSPTSPTYSPPSPS 1769
Query: 412 Y--SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y SP SP Y+P SP YSP SP YSPTSP YSP+SP +SP
Sbjct: 1770 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSP 1809
Score = 70.9 bits (172), Expect = 5e-11
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S P H SP+ SP + ++SP + +SPSS+ YSP+SP
Sbjct: 1797 SPLYSPSS--PQH----SPSNQYSPTGSTYSATSPRYSPNMS--IYSPSSTK-YSPTSPT 1847
Query: 433 YSPTSPGYSPTSPGYSPTSPG-YSPTSPTYSP 525
Y+PT+ YSPTSP YSPT+P YSPTSP YSP
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Score = 70.1 bits (170), Expect = 9e-11
Identities = 47/110 (42%), Positives = 59/110 (53%), Gaps = 17/110 (15%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNY------LLSPNMRLSPMSDAQFSPYVGGMA-----FS 393
G +P S TP + SP++ + SP SP S + +SP + +S
Sbjct: 1639 GYSPTSPVYSPTPNFQS--SPSFAGSGSNIYSPGNAYSP-SSSNYSPNSPSYSPTSPSYS 1695
Query: 394 PSS------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
PSS SP YSP+SP YSPTSP Y+P +P YSPTSP YS SP YSP
Sbjct: 1696 PSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPHYSP 1744
Score = 69.3 bits (168), Expect = 2e-10
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPG-YS 480
SP Y SPNM + S ++SP +SP Y+P++ YSPTSP YSPT+P YS
Sbjct: 1824 SPRY--SPNMSIYSPSSTKYSP----------TSPTYTPTARNYSPTSPMYSPTAPSHYS 1871
Query: 481 PTSPGYSPTSPTY 519
PTSP YSP+SPT+
Sbjct: 1872 PTSPAYSPSSPTF 1884
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS------SSPGYSPSSPGYSPTSPGYSPT 465
SP Y SP L S Q SP +SP+ +SP YSP+ YSP+S YSPT
Sbjct: 1790 SPKY--SPTSPLYSPSSPQHSP---SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 1844
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP Y+PT+ YSPTSP YSP
Sbjct: 1845 SPTYTPTARNYSPTSPMYSP 1864
Score = 61.6 bits (148), Expect = 3e-08
Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLL-SPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA S T SP Y SP+ SP S Q++P G +SP+S P YSP+SP
Sbjct: 1743 SPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSP-QYTP--GSPQYSPAS-PKYSPTSP 1798
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP +SP++ YSPT YS TSP YSP
Sbjct: 1799 LYSPSSPQHSPSNQ-YSPTGSTYSATSPRYSP 1829
Score = 60.5 bits (145), Expect = 7e-08
Identities = 44/95 (46%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSP-YVGGMAFSPSSSPGYSPSS 426
+P+ SP S P + SP+Y SPN S + SP Y +SP+S P YS +
Sbjct: 1698 SPSYSPTS--PCYSPT-SPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPAS-PAYSQTG 1753
Query: 427 PGYSPTSPGYSPTSPGY--SPTSPGYSPTSPTYSP 525
YSPTSP YSP SP Y SP SP Y+P SP YSP
Sbjct: 1754 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1788
[146][TOP]
>UniRef100_B6H9U6 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6H9U6_PENCW
Length = 1733
Score = 145 bits (365), Expect = 2e-33
Identities = 94/224 (41%), Positives = 116/224 (51%), Gaps = 49/224 (21%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D G LMRCSFEETV+ILL+AAA+ E D RGV+EN++LGQ+AP GTG+ ++YL
Sbjct: 1407 RHGINRADNGALMRCSFEETVEILLEAAAFGELDDCRGVSENLILGQMAPAGTGEFDVYL 1466
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEG--MMSPNYLL--SPNMRLSPM 348
+ +L + + G S + T Y G M S Y+ PN SPM
Sbjct: 1467 DQSLLNTVVSNNARYGLMGAVGAKDAIISDGAATQYDTGSPMASSPYMAGGDPNSTFSPM 1526
Query: 349 SDAQFSPYVGGM-----------AFSPS-----------------SSPGYSPS------- 423
P GG+ FSP+ +SPGYSPS
Sbjct: 1527 HQIGQEP-TGGLTEYQATTSTFGGFSPAARSPGGYSPTSPFNTSPTSPGYSPSSSYSPTS 1585
Query: 424 -------SPGYSPTSPGYSPTSPGYSPTSPGY---SPTSPTYSP 525
SPG+SP SP + PTSP YSPTSP Y SPTSP+YSP
Sbjct: 1586 PGIGMMTSPGFSPASPTFQPTSPAYSPTSPAYGQASPTSPSYSP 1629
Score = 83.2 bits (204), Expect = 1e-14
Identities = 51/118 (43%), Positives = 64/118 (54%), Gaps = 25/118 (21%)
Frame = +1
Query: 247 GMTPARSPVSG----TPYHEGMMSPNYLLSPNMRLSP-------MSDAQFSP-----YVG 378
G +PA G +P++ SP Y SP+ SP M+ FSP
Sbjct: 1549 GFSPAARSPGGYSPTSPFNTSPTSPGY--SPSSSYSPTSPGIGMMTSPGFSPASPTFQPT 1606
Query: 379 GMAFSPSS---------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
A+SP+S SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP
Sbjct: 1607 SPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSP 1664
Score = 73.2 bits (178), Expect = 1e-11
Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMA-FSPS---SSPG 411
G +P+ S +P M SP + SP + + + + SP G + SPS +SPG
Sbjct: 1574 GYSPSSSYSPTSPGIGMMTSPGFSPASPTFQPTSPAYSPTSPAYGQASPTSPSYSPTSPG 1633
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP 513
+SP+SP YSPTSP +SP SP +SPTSP YSPTSP
Sbjct: 1634 FSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSP 1667
Score = 73.2 bits (178), Expect = 1e-11
Identities = 52/113 (46%), Positives = 62/113 (54%), Gaps = 19/113 (16%)
Frame = +1
Query: 244 FGMTPARSPVSGTPYHEGMM--SPNYL--------LSPNMRLSPMSDAQFSPYVGGMA-F 390
+G SP S +P G SPNY SP + S + SP +GG
Sbjct: 1617 YGQASPTSP-SYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGARHL 1675
Query: 391 SPSS--SPGYSPSSPGYSPTSP-GYSPTSPGYS-----PTSPGYSPTSPTYSP 525
SP+S SP Y+P+SPG+SPTSP YSPTSP +S PTSP YSPTSP YSP
Sbjct: 1676 SPTSPTSPKYTPTSPGWSPTSPQSYSPTSPNFSGSPTSPTSPAYSPTSPAYSP 1728
Score = 56.6 bits (135), Expect = 1e-06
Identities = 47/114 (41%), Positives = 57/114 (50%), Gaps = 17/114 (14%)
Frame = +1
Query: 235 GLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPG 411
G+ +P SP S T SP Y SP + + +SP G FSP+S P
Sbjct: 1587 GIGMMTSPGFSPASPTFQPT---SPAYSPTSPAYGQASPTSPSYSPTSPG--FSPTS-PN 1640
Query: 412 YSPSSP-------GYSPTSPGYSPTSPGY---------SPTSPGYSPTSPTYSP 525
YSP+SP +SPTSP YSPTSP SPTSP Y+PTSP +SP
Sbjct: 1641 YSPTSPSFSPASPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYTPTSPGWSP 1694
Score = 55.8 bits (133), Expect = 2e-06
Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Frame = +1
Query: 319 LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYS-----PTSPGYSPTSPGYSP 483
LSP SP +++P G +SP+S YSP+SP +S PTSP YSPTSP YSP
Sbjct: 1675 LSPTSPTSP----KYTPTSPG--WSPTSPQSYSPTSPNFSGSPTSPTSPAYSPTSPAYSP 1728
Query: 484 TSP 492
TSP
Sbjct: 1729 TSP 1731
[147][TOP]
>UniRef100_A9UNH9 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster
RepID=A9UNH9_DROME
Length = 1887
Score = 144 bits (364), Expect = 3e-33
Identities = 101/240 (42%), Positives = 120/240 (50%), Gaps = 65/240 (27%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 1408 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 1467
Query: 181 NDEMLKNAIEL----------------------------------QLPSYMD--GLEFGM 252
+ E + IE+ P Y G M
Sbjct: 1468 DAEKCRFGIEIPNTLGNSMLGGAAMFIGGGSTPSMTPPMTPWANCNTPRYFSPPGHVSAM 1527
Query: 253 TP--------ARSPVSG-----TPYHEGM--MSPNYLLSPNMRLSPMSDAQFSPYVGG-M 384
TP A S SG +P H G SP +SP SP +SP
Sbjct: 1528 TPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYT 1587
Query: 385 AFSP-SSSPGYSPSSPGYSPTS------------PGYSPTSPGYSPTSPGYSPTSPTYSP 525
A SP +SP YSPSSP YSPTS P ++P S GYSP+S GYSPTSP YSP
Sbjct: 1588 ASSPGGASPNYSPSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSP 1647
Score = 84.0 bits (206), Expect = 6e-15
Identities = 49/100 (49%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSDAQFSPYVGGMAFSPSSS------ 405
G +P+ S S T SP Y + + SP + + + Y G A+SPSSS
Sbjct: 1630 GYSPSSSGYSPT-------SPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNS 1682
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP Y+P
Sbjct: 1683 PSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP 1722
Score = 78.6 bits (192), Expect = 3e-13
Identities = 44/101 (43%), Positives = 57/101 (56%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
P Y ++F +P+ + Y SP SP+ + +SP ++SPS
Sbjct: 1643 PVYSPTVQFQSSPSFAGSGSNIY-----SPGNAYSPSSSNYSPNSPSYSPT--SPSYSPS 1695
Query: 400 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
S P YSP+SP YSPTSP YSPTSP Y+P +P YSPTSP YS
Sbjct: 1696 S-PSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS 1735
Score = 71.6 bits (174), Expect = 3e-11
Identities = 47/100 (47%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+TP+ SP S PNY SP + SP S A G+ +SP+S SP
Sbjct: 1723 VTPSYSPTS----------PNYSASP--QYSPASPAYSQT---GVKYSPTSPTYSPPSPS 1767
Query: 412 Y--SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y SP SP Y+P SP YSP SP YSPTSP YSP+SP +SP
Sbjct: 1768 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSP 1807
Score = 68.9 bits (167), Expect = 2e-10
Identities = 43/92 (46%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S P H SP+ SP + ++SP + +SPSS+ YSP+SP
Sbjct: 1795 SPLYSPSS--PQH----SPSNQYSPTGSTYSATSPRYSPNMS--IYSPSSTK-YSPTSPT 1845
Query: 433 YSPTSPGYSPTSPGYSPTSPG-YSPTSPTYSP 525
Y+PT+ YSPT P YSPT+P YSPTSP YSP
Sbjct: 1846 YTPTARNYSPTPPMYSPTAPSHYSPTSPAYSP 1877
Score = 67.4 bits (163), Expect = 6e-10
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPG-YS 480
SP Y SPNM + S ++SP +SP Y+P++ YSPT P YSPT+P YS
Sbjct: 1822 SPRY--SPNMSIYSPSSTKYSP----------TSPTYTPTARNYSPTPPMYSPTAPSHYS 1869
Query: 481 PTSPGYSPTSPTY 519
PTSP YSP+SPT+
Sbjct: 1870 PTSPAYSPSSPTF 1882
Score = 62.8 bits (151), Expect = 1e-08
Identities = 38/80 (47%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS------SSPGYSPSSPGYSPTSPGYSPT 465
SP Y SP L S Q SP +SP+ +SP YSP+ YSP+S YSPT
Sbjct: 1788 SPKY--SPTSPLYSPSSPQHSP---SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 1842
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP Y+PT+ YSPT P YSP
Sbjct: 1843 SPTYTPTARNYSPTPPMYSP 1862
Score = 62.0 bits (149), Expect = 2e-08
Identities = 45/103 (43%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLL-SPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y ++ +PA S T SP Y SP+ SP S Q++P G +SP
Sbjct: 1732 PNYSASPQY--SPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSP-QYTP--GSPQYSP 1786
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSP+SP +SP++ YSPT YS TSP YSP
Sbjct: 1787 AS-PKYSPTSPLYSPSSPQHSPSNQ-YSPTGSTYSATSPRYSP 1827
Score = 60.8 bits (146), Expect = 5e-08
Identities = 44/95 (46%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSP-YVGGMAFSPSSSPGYSPSS 426
+P+ SP S P + SP+Y SPN S + SP Y +SP+S P YS +
Sbjct: 1696 SPSYSPTS--PCYSPT-SPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPAS-PAYSQTG 1751
Query: 427 PGYSPTSPGYSPTSPGY--SPTSPGYSPTSPTYSP 525
YSPTSP YSP SP Y SP SP Y+P SP YSP
Sbjct: 1752 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1786
[148][TOP]
>UniRef100_Q9C428 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis
macrandra RepID=Q9C428_9FUNG
Length = 1603
Score = 144 bits (364), Expect = 3e-33
Identities = 98/239 (41%), Positives = 123/239 (51%), Gaps = 64/239 (26%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR + G L R SFEETV+IL+DAA ETD RGV+ENI+LGQLAP+GTG+ ++ L
Sbjct: 1337 RHGINRTENGALARSSFEETVEILMDAAGSGETDICRGVSENIILGQLAPLGTGEFDVLL 1396
Query: 181 NDEMLK-NAIE----LQLPSYMDGLEFGMTP-ARSPVS------------GTPYHE---- 294
++++L+ NA L SY G TP R+P+S G PY
Sbjct: 1397 DEQVLEANARSATGGLYTNSYTADFSGGKTPDHRAPMSPSGAQFYPASPGGAPYENYPGD 1456
Query: 295 -------------------------------------GMMSPNYLLSPNMRLSPMSDAQF 363
+M+ L SP+ + M A F
Sbjct: 1457 QPMFSPIGVDSGRDTGRWTPGMSGGQSPYASTHRCDPRLMNKRSLRSPSSPVYSMWLASF 1516
Query: 364 ---SPYVGGMAFSPSS--SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P++ F S SPGYSP+SP YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 1517 GLLQPFLIVRCFGVISPTSPGYSPTSPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSP 1575
Score = 82.4 bits (202), Expect = 2e-14
Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 6/83 (7%)
Frame = +1
Query: 295 GMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGY 456
G++ P ++ +SP S +SP ++SP+S SP YSP+SP YSPTSP Y
Sbjct: 1517 GLLQPFLIVRCFGVISPTSPG-YSPT--SPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSY 1573
Query: 457 SPTSPGYSPTSPGYSPTSPTYSP 525
SPTSP YSPTSP YSPTSP+YSP
Sbjct: 1574 SPTSPSYSPTSPSYSPTSPSYSP 1596
Score = 82.0 bits (201), Expect = 2e-14
Identities = 44/75 (58%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = +1
Query: 304 SPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYS 480
SP Y SP+ + S SP ++SP+S P YSP+SP YSPTSP YSPTSP YS
Sbjct: 1535 SPGYSPTSPSYSPTSPSYTPTSP-----SYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1588
Query: 481 PTSPGYSPTSPTYSP 525
PTSP YSPTSP+YSP
Sbjct: 1589 PTSPSYSPTSPSYSP 1603
[149][TOP]
>UniRef100_P04052 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Drosophila
melanogaster RepID=RPB1_DROME
Length = 1887
Score = 144 bits (364), Expect = 3e-33
Identities = 101/240 (42%), Positives = 120/240 (50%), Gaps = 65/240 (27%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 1408 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 1467
Query: 181 NDEMLKNAIEL----------------------------------QLPSYMD--GLEFGM 252
+ E + IE+ P Y G M
Sbjct: 1468 DAEKCRFGIEIPNTLGNSMLGGAAMFIGGGSTPSMTPPMTPWANCNTPRYFSPPGHVSAM 1527
Query: 253 TP--------ARSPVSG-----TPYHEGM--MSPNYLLSPNMRLSPMSDAQFSPYVGG-M 384
TP A S SG +P H G SP +SP SP +SP
Sbjct: 1528 TPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYT 1587
Query: 385 AFSP-SSSPGYSPSSPGYSPTS------------PGYSPTSPGYSPTSPGYSPTSPTYSP 525
A SP +SP YSPSSP YSPTS P ++P S GYSP+S GYSPTSP YSP
Sbjct: 1588 ASSPGGASPNYSPSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSP 1647
Score = 84.0 bits (206), Expect = 6e-15
Identities = 49/100 (49%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSDAQFSPYVGGMAFSPSSS------ 405
G +P+ S S T SP Y + + SP + + + Y G A+SPSSS
Sbjct: 1630 GYSPSSSGYSPT-------SPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNS 1682
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP Y+P
Sbjct: 1683 PSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP 1722
Score = 78.6 bits (192), Expect = 3e-13
Identities = 44/101 (43%), Positives = 57/101 (56%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
P Y ++F +P+ + Y SP SP+ + +SP ++SPS
Sbjct: 1643 PVYSPTVQFQSSPSFAGSGSNIY-----SPGNAYSPSSSNYSPNSPSYSPT--SPSYSPS 1695
Query: 400 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
S P YSP+SP YSPTSP YSPTSP Y+P +P YSPTSP YS
Sbjct: 1696 S-PSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS 1735
Score = 71.6 bits (174), Expect = 3e-11
Identities = 47/100 (47%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+TP+ SP S PNY SP + SP S A G+ +SP+S SP
Sbjct: 1723 VTPSYSPTS----------PNYSASP--QYSPASPAYSQT---GVKYSPTSPTYSPPSPS 1767
Query: 412 Y--SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y SP SP Y+P SP YSP SP YSPTSP YSP+SP +SP
Sbjct: 1768 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSP 1807
Score = 70.9 bits (172), Expect = 5e-11
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S P H SP+ SP + ++SP + +SPSS+ YSP+SP
Sbjct: 1795 SPLYSPSS--PQH----SPSNQYSPTGSTYSATSPRYSPNMS--IYSPSSTK-YSPTSPT 1845
Query: 433 YSPTSPGYSPTSPGYSPTSPG-YSPTSPTYSP 525
Y+PT+ YSPTSP YSPT+P YSPTSP YSP
Sbjct: 1846 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1877
Score = 69.3 bits (168), Expect = 2e-10
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPG-YS 480
SP Y SPNM + S ++SP +SP Y+P++ YSPTSP YSPT+P YS
Sbjct: 1822 SPRY--SPNMSIYSPSSTKYSP----------TSPTYTPTARNYSPTSPMYSPTAPSHYS 1869
Query: 481 PTSPGYSPTSPTY 519
PTSP YSP+SPT+
Sbjct: 1870 PTSPAYSPSSPTF 1882
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS------SSPGYSPSSPGYSPTSPGYSPT 465
SP Y SP L S Q SP +SP+ +SP YSP+ YSP+S YSPT
Sbjct: 1788 SPKY--SPTSPLYSPSSPQHSP---SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 1842
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP Y+PT+ YSPTSP YSP
Sbjct: 1843 SPTYTPTARNYSPTSPMYSP 1862
Score = 62.0 bits (149), Expect = 2e-08
Identities = 45/103 (43%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLL-SPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y ++ +PA S T SP Y SP+ SP S Q++P G +SP
Sbjct: 1732 PNYSASPQY--SPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSP-QYTP--GSPQYSP 1786
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSP+SP +SP++ YSPT YS TSP YSP
Sbjct: 1787 AS-PKYSPTSPLYSPSSPQHSPSNQ-YSPTGSTYSATSPRYSP 1827
Score = 60.8 bits (146), Expect = 5e-08
Identities = 44/95 (46%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSP-YVGGMAFSPSSSPGYSPSS 426
+P+ SP S P + SP+Y SPN S + SP Y +SP+S P YS +
Sbjct: 1696 SPSYSPTS--PCYSPT-SPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPAS-PAYSQTG 1751
Query: 427 PGYSPTSPGYSPTSPGY--SPTSPGYSPTSPTYSP 525
YSPTSP YSP SP Y SP SP Y+P SP YSP
Sbjct: 1752 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1786
[150][TOP]
>UniRef100_Q9HGZ5 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=Q9HGZ5_ASPOR
Length = 1748
Score = 144 bits (363), Expect = 4e-33
Identities = 101/250 (40%), Positives = 123/250 (49%), Gaps = 75/250 (30%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D G LMRCSFEETV+ILL+AAA+ E D RGV+EN++LGQ+AP GTG+ ++YL
Sbjct: 1412 RHGINRADNGALMRCSFEETVEILLEAAAFGELDDCRGVSENLILGQMAPAGTGEFDIYL 1471
Query: 181 NDEMLKNAI-------------------------ELQLPSYMDGLEFGMTP--------- 258
+ ML + + S M + TP
Sbjct: 1472 DQNMLNTVVSNNARFGVMGAIGAKDAIISDGASTQYDTGSPMQDNAYIGTPDPESNFSPI 1531
Query: 259 ----ARSPVSGTPYHE-----GMMSP------NYLLSPNMRLSPMS-----DAQFSPYVG 378
A SP T Y G SP Y S +P S + +SP
Sbjct: 1532 RQAGAESPGGFTEYQPTGGFGGGFSPAATSPAGYSPSSPFSANPTSPGYSPSSSYSPTSP 1591
Query: 379 GMA------------FSPSS------SPGYSPSSPGY---SPTSPGYSPTSPGYSPTSPG 495
GMA FSP+S SP YSP+SP Y SPTSP YSPTSPG+SPTSP
Sbjct: 1592 GMAMTSPRFSMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPN 1651
Query: 496 YSPTSPTYSP 525
YSPTSP++SP
Sbjct: 1652 YSPTSPSFSP 1661
Score = 82.0 bits (201), Expect = 2e-14
Identities = 50/104 (48%), Positives = 62/104 (59%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVSG-TPYHEGMM--SPNY-LLSPNMRLSPMSDAQFSPYVGGMAFSPSS------ 402
+P SP S +P GM SP + + SP + S A SP A+SP+S
Sbjct: 1577 SPGYSPSSSYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSP-----AYSPTSPAYGQA 1631
Query: 403 ---SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP
Sbjct: 1632 SPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSP 1675
Score = 72.4 bits (176), Expect = 2e-11
Identities = 52/117 (44%), Positives = 64/117 (54%), Gaps = 23/117 (19%)
Frame = +1
Query: 244 FGMTPARSPVSGTPYHEGMM--SPNYL--------LSPNMRLSPMSDAQFSPYVGGMA-- 387
+G SP S +P G SPNY SP + S + SP +GG A
Sbjct: 1628 YGQASPTSP-SYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAARH 1686
Query: 388 FSPSS--SPGYSPSSPGYSPTSPG-YSPTSPGYS--------PTSPGYSPTSPTYSP 525
SP+S SP Y+P+SPG+SPTSP YSPTSP ++ PTSPGYSPTSP +SP
Sbjct: 1687 LSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSP 1743
Score = 71.2 bits (173), Expect = 4e-11
Identities = 47/102 (46%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP+Y SP + +SP +FSP+S P +SP+SP
Sbjct: 1618 SPAYSPTSPAYGQASPTSPSY--SPTSPGFSPTSPNYSPT--SPSFSPAS-PAFSPTSPS 1672
Query: 433 YSPTSPGY----------SPTSPGYSPTSPGYSPTSP-TYSP 525
YSPTSP SPTSP Y+PTSPG+SPTSP TYSP
Sbjct: 1673 YSPTSPAIGGAARHLSPTSPTSPKYTPTSPGWSPTSPQTYSP 1714
Score = 67.0 bits (162), Expect = 8e-10
Identities = 45/103 (43%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +PA + T SP Y + SP S + +SP G FSP+S P YSP+S
Sbjct: 1606 GFSPASPSFAPTSPAYSPTSPAY-----GQASPTSPS-YSPTSPG--FSPTS-PNYSPTS 1656
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGY----------SPTSPTYSP 525
P +SP SP +SPTSP YSPTSP SPTSP Y+P
Sbjct: 1657 PSFSPASPAFSPTSPSYSPTSPAIGGAARHLSPTSPTSPKYTP 1699
[151][TOP]
>UniRef100_Q9XZU9 DNA-directed RNA polymerase n=1 Tax=Drosophila subobscura
RepID=Q9XZU9_DROSU
Length = 1889
Score = 144 bits (362), Expect = 5e-33
Identities = 99/209 (47%), Positives = 122/209 (58%), Gaps = 35/209 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 1408 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 1467
Query: 181 NDEMLKNAIEL--QLPSYMDG-----LEFGMTPARSP------------VSGTPYHEGMM 303
+ E + IE+ L S M G + G TP+ +P P H M
Sbjct: 1468 DAEKCRFGIEIPNTLGSSMLGGTAMFIGGGSTPSMTPPMTPWVNCNTPRYFSPPGHVSAM 1527
Query: 304 SPNYLLSPNMRLSPMSDA-----QFSPYVGGMAFS---PSSSPGY--SPS-SPGYSPTSP 450
+P P+ S SDA +SP G + S PS SP Y SPS SP YSPTSP
Sbjct: 1528 TPG---GPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPSYSPTSP 1584
Query: 451 GYSPTSPG-----YSPTSPGYSPTSPTYS 522
Y+ +SPG YSP+SP YSPTSP Y+
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTSPLYA 1613
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/100 (49%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSDAQFSPYVGGMAFSPSS------S 405
G +P+ S S T SP Y + N SP + + + Y G A+SPSS S
Sbjct: 1632 GYSPSASGYSPT-------SPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNS 1684
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SP YSP+SP YSPTSP YSP+SP YSPTSP Y+P
Sbjct: 1685 PSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTP 1724
Score = 83.6 bits (205), Expect = 8e-15
Identities = 46/92 (50%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMM-SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P SP S P S + + SP SP S +SP ++SP+S P YSPSSP
Sbjct: 1644 SPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSP-SSTNYSP--NSPSYSPTS-PSYSPSSP 1699
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+SP YSPTSP Y+P +P+YSP
Sbjct: 1700 SYSPTSPCYSPSSPSYSPTSPNYTPATPSYSP 1731
Score = 71.2 bits (173), Expect = 4e-11
Identities = 49/104 (47%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVS-----GTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS----- 402
+P+ SP S TP + SPNY SP+ SP S A G +SP+S
Sbjct: 1712 SPSYSPTSPNYTPATPSYSPT-SPNYSASPHY--SPASPAYSQT---GAKYSPTSPTYSP 1765
Query: 403 -SPGY--SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP Y SP SP Y+P SP YSP SP YSPTSP YSP+SP +SP
Sbjct: 1766 PSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSP 1809
Score = 70.9 bits (172), Expect = 5e-11
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S P H SP+ SP + ++SP + +SPSS+ YSP+SP
Sbjct: 1797 SPLYSPSS--PQH----SPSNQYSPTGSTYSATSPRYSPNMS--IYSPSSTK-YSPTSPT 1847
Query: 433 YSPTSPGYSPTSPGYSPTSPG-YSPTSPTYSP 525
Y+PT+ YSPTSP YSPT+P YSPTSP YSP
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Score = 69.3 bits (168), Expect = 2e-10
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPG-YS 480
SP Y SPNM + S ++SP +SP Y+P++ YSPTSP YSPT+P YS
Sbjct: 1824 SPRY--SPNMSIYSPSSTKYSP----------TSPTYTPTARNYSPTSPMYSPTAPSHYS 1871
Query: 481 PTSPGYSPTSPTY 519
PTSP YSP+SPT+
Sbjct: 1872 PTSPAYSPSSPTF 1884
Score = 67.8 bits (164), Expect = 4e-10
Identities = 48/125 (38%), Positives = 59/125 (47%), Gaps = 23/125 (18%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMM----SPNYLLSPNMRLSPMSDAQFSPYVGGMA 387
P Y F +P+ + Y G S NY SPN + +SP +
Sbjct: 1645 PVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNY--SPNSPSYSPTSPSYSP--SSPS 1700
Query: 388 FSPSS------SPGYSPSSPGYSPTSPGYSPTSPG------YSPTSPG-------YSPTS 510
+SP+S SP YSP+SP Y+P +P YSPTSP YSP SP YSPTS
Sbjct: 1701 YSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTS 1760
Query: 511 PTYSP 525
PTYSP
Sbjct: 1761 PTYSP 1765
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS------SSPGYSPSSPGYSPTSPGYSPT 465
SP Y SP L S Q SP +SP+ +SP YSP+ YSP+S YSPT
Sbjct: 1790 SPKY--SPTSPLYSPSSPQHSP---SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 1844
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP Y+PT+ YSPTSP YSP
Sbjct: 1845 SPTYTPTARNYSPTSPMYSP 1864
Score = 61.2 bits (147), Expect = 4e-08
Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLL-SPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA S T SP Y SP+ SP S Q++P G +SP+S P YSP+SP
Sbjct: 1743 SPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSP-QYTP--GSPQYSPAS-PKYSPTSP 1798
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP +SP++ YSPT YS TSP YSP
Sbjct: 1799 LYSPSSPQHSPSNQ-YSPTGSTYSATSPRYSP 1829
[152][TOP]
>UniRef100_Q9XZU8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila
pseudoobscura pseudoobscura RepID=Q9XZU8_DROPS
Length = 1811
Score = 144 bits (362), Expect = 5e-33
Identities = 99/209 (47%), Positives = 122/209 (58%), Gaps = 35/209 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 1330 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 1389
Query: 181 NDEMLKNAIEL--QLPSYMDG-----LEFGMTPARSP------------VSGTPYHEGMM 303
+ E + IE+ L S M G + G TP+ +P P H M
Sbjct: 1390 DAEKCRFGIEIPNTLGSSMLGGTAMFIGGGSTPSMTPPMTPWVNCNTPRYFSPPGHVSAM 1449
Query: 304 SPNYLLSPNMRLSPMSDA-----QFSPYVGGMAFS---PSSSPGY--SPS-SPGYSPTSP 450
+P P+ S SDA +SP G + S PS SP Y SPS SP YSPTSP
Sbjct: 1450 TPG---GPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSP 1506
Query: 451 GYSPTSPG-----YSPTSPGYSPTSPTYS 522
Y+ +SPG YSP+SP YSPTSP Y+
Sbjct: 1507 NYTASSPGGASPNYSPSSPNYSPTSPLYA 1535
Score = 85.9 bits (211), Expect = 2e-15
Identities = 50/100 (50%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSDAQFSPYVGGMAFSPSS------S 405
G +P+ S S T SP Y + N SP + + + Y G A+SPSS S
Sbjct: 1554 GYSPSASGYSPT-------SPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNS 1606
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP Y+P
Sbjct: 1607 PSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP 1646
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/92 (51%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMM-SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P SP S P S + + SP SP S +SP ++SP+S P YSPSSP
Sbjct: 1566 SPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSP-SSTNYSP--NSPSYSPTS-PSYSPSSP 1621
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+P +P+YSP
Sbjct: 1622 SYSPTSPCYSPTSPSYSPTSPNYTPATPSYSP 1653
Score = 71.2 bits (173), Expect = 4e-11
Identities = 49/104 (47%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVS-----GTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS----- 402
+P+ SP S TP + SPNY SP+ SP S A G +SP+S
Sbjct: 1634 SPSYSPTSPNYTPATPSYSPT-SPNYSASPHY--SPASPAYSQT---GAKYSPTSPTYSP 1687
Query: 403 -SPGY--SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP Y SP SP Y+P SP YSP SP YSPTSP YSP+SP +SP
Sbjct: 1688 PSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSP 1731
Score = 70.9 bits (172), Expect = 5e-11
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S P H SP+ SP + ++SP + +SPSS+ YSP+SP
Sbjct: 1719 SPLYSPSS--PQH----SPSNQYSPTGSTYSATSPRYSPNMS--IYSPSSTK-YSPTSPT 1769
Query: 433 YSPTSPGYSPTSPGYSPTSPG-YSPTSPTYSP 525
Y+PT+ YSPTSP YSPT+P YSPTSP YSP
Sbjct: 1770 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1801
Score = 69.3 bits (168), Expect = 2e-10
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPG-YS 480
SP Y SPNM + S ++SP +SP Y+P++ YSPTSP YSPT+P YS
Sbjct: 1746 SPRY--SPNMSIYSPSSTKYSP----------TSPTYTPTARNYSPTSPMYSPTAPSHYS 1793
Query: 481 PTSPGYSPTSPTY 519
PTSP YSP+SPT+
Sbjct: 1794 PTSPAYSPSSPTF 1806
Score = 67.8 bits (164), Expect = 4e-10
Identities = 48/125 (38%), Positives = 59/125 (47%), Gaps = 23/125 (18%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMM----SPNYLLSPNMRLSPMSDAQFSPYVGGMA 387
P Y F +P+ + Y G S NY SPN + +SP +
Sbjct: 1567 PVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNY--SPNSPSYSPTSPSYSP--SSPS 1622
Query: 388 FSPSS------SPGYSPSSPGYSPTSPGYSPTSPG------YSPTSPG-------YSPTS 510
+SP+S SP YSP+SP Y+P +P YSPTSP YSP SP YSPTS
Sbjct: 1623 YSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTS 1682
Query: 511 PTYSP 525
PTYSP
Sbjct: 1683 PTYSP 1687
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS------SSPGYSPSSPGYSPTSPGYSPT 465
SP Y SP L S Q SP +SP+ +SP YSP+ YSP+S YSPT
Sbjct: 1712 SPKY--SPTSPLYSPSSPQHSP---SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 1766
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP Y+PT+ YSPTSP YSP
Sbjct: 1767 SPTYTPTARNYSPTSPMYSP 1786
Score = 61.2 bits (147), Expect = 4e-08
Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLL-SPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA S T SP Y SP+ SP S Q++P G +SP+S P YSP+SP
Sbjct: 1665 SPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSP-QYTP--GSPQYSPAS-PKYSPTSP 1720
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP +SP++ YSPT YS TSP YSP
Sbjct: 1721 LYSPSSPQHSPSNQ-YSPTGSTYSATSPRYSP 1751
[153][TOP]
>UniRef100_Q9XZS2 DNA-directed RNA polymerase n=1 Tax=Drosophila madeirensis
RepID=Q9XZS2_DROMD
Length = 1889
Score = 144 bits (362), Expect = 5e-33
Identities = 99/209 (47%), Positives = 122/209 (58%), Gaps = 35/209 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 1408 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 1467
Query: 181 NDEMLKNAIEL--QLPSYMDG-----LEFGMTPARSP------------VSGTPYHEGMM 303
+ E + IE+ L S M G + G TP+ +P P H M
Sbjct: 1468 DAEKCRFGIEIPNTLGSSMLGGTAMFIGGGSTPSMTPPMTPWVNCNTPRYFSPPGHVSAM 1527
Query: 304 SPNYLLSPNMRLSPMSDA-----QFSPYVGGMAFS---PSSSPGY--SPS-SPGYSPTSP 450
+P P+ S SDA +SP G + S PS SP Y SPS SP YSPTSP
Sbjct: 1528 TPG---GPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPSYSPTSP 1584
Query: 451 GYSPTSPG-----YSPTSPGYSPTSPTYS 522
Y+ +SPG YSP+SP YSPTSP Y+
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTSPLYA 1613
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/100 (49%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSDAQFSPYVGGMAFSPSS------S 405
G +P+ S S T SP Y + N SP + + + Y G A+SPSS S
Sbjct: 1632 GYSPSASGYSPT-------SPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNS 1684
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SP YSP+SP YSPTSP YSP+SP YSPTSP Y+P
Sbjct: 1685 PSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTP 1724
Score = 83.6 bits (205), Expect = 8e-15
Identities = 46/92 (50%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMM-SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P SP S P S + + SP SP S +SP ++SP+S P YSPSSP
Sbjct: 1644 SPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSP-SSTNYSP--NSPSYSPTS-PSYSPSSP 1699
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+SP YSPTSP Y+P +P+YSP
Sbjct: 1700 SYSPTSPCYSPSSPSYSPTSPNYTPATPSYSP 1731
Score = 71.2 bits (173), Expect = 4e-11
Identities = 49/104 (47%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVS-----GTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS----- 402
+P+ SP S TP + SPNY SP+ SP S A G +SP+S
Sbjct: 1712 SPSYSPTSPNYTPATPSYSPT-SPNYSASPHY--SPASPAYSQT---GAKYSPTSPTYSP 1765
Query: 403 -SPGY--SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP Y SP SP Y+P SP YSP SP YSPTSP YSP+SP +SP
Sbjct: 1766 PSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSP 1809
Score = 70.9 bits (172), Expect = 5e-11
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S P H SP+ SP + ++SP + +SPSS+ YSP+SP
Sbjct: 1797 SPLYSPSS--PQH----SPSNQYSPTGSTYSATSPRYSPNMS--IYSPSSTK-YSPTSPT 1847
Query: 433 YSPTSPGYSPTSPGYSPTSPG-YSPTSPTYSP 525
Y+PT+ YSPTSP YSPT+P YSPTSP YSP
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Score = 69.3 bits (168), Expect = 2e-10
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPG-YS 480
SP Y SPNM + S ++SP +SP Y+P++ YSPTSP YSPT+P YS
Sbjct: 1824 SPRY--SPNMSIYSPSSTKYSP----------TSPTYTPTARNYSPTSPMYSPTAPSHYS 1871
Query: 481 PTSPGYSPTSPTY 519
PTSP YSP+SPT+
Sbjct: 1872 PTSPAYSPSSPTF 1884
Score = 67.8 bits (164), Expect = 4e-10
Identities = 48/125 (38%), Positives = 59/125 (47%), Gaps = 23/125 (18%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMM----SPNYLLSPNMRLSPMSDAQFSPYVGGMA 387
P Y F +P+ + Y G S NY SPN + +SP +
Sbjct: 1645 PVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNY--SPNSPSYSPTSPSYSP--SSPS 1700
Query: 388 FSPSS------SPGYSPSSPGYSPTSPGYSPTSPG------YSPTSPG-------YSPTS 510
+SP+S SP YSP+SP Y+P +P YSPTSP YSP SP YSPTS
Sbjct: 1701 YSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTS 1760
Query: 511 PTYSP 525
PTYSP
Sbjct: 1761 PTYSP 1765
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS------SSPGYSPSSPGYSPTSPGYSPT 465
SP Y SP L S Q SP +SP+ +SP YSP+ YSP+S YSPT
Sbjct: 1790 SPKY--SPTSPLYSPSSPQHSP---SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 1844
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP Y+PT+ YSPTSP YSP
Sbjct: 1845 SPTYTPTARNYSPTSPMYSP 1864
Score = 61.2 bits (147), Expect = 4e-08
Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLL-SPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA S T SP Y SP+ SP S Q++P G +SP+S P YSP+SP
Sbjct: 1743 SPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSP-QYTP--GSPQYSPAS-PKYSPTSP 1798
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP +SP++ YSPT YS TSP YSP
Sbjct: 1799 LYSPSSPQHSPSNQ-YSPTGSTYSATSPRYSP 1829
[154][TOP]
>UniRef100_Q9XZS1 DNA-directed RNA polymerase n=1 Tax=Drosophila guanche
RepID=Q9XZS1_DROGU
Length = 1889
Score = 144 bits (362), Expect = 5e-33
Identities = 99/209 (47%), Positives = 122/209 (58%), Gaps = 35/209 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 1408 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 1467
Query: 181 NDEMLKNAIEL--QLPSYMDG-----LEFGMTPARSP------------VSGTPYHEGMM 303
+ E + IE+ L S M G + G TP+ +P P H M
Sbjct: 1468 DAEKCRFGIEIPNTLGSSMLGGTAMFIGGGSTPSMTPPMTPWVNCNTPRYFSPPGHVSAM 1527
Query: 304 SPNYLLSPNMRLSPMSDA-----QFSPYVGGMAFS---PSSSPGY--SPS-SPGYSPTSP 450
+P P+ S SDA +SP G + S PS SP Y SPS SP YSPTSP
Sbjct: 1528 TPG---GPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSP 1584
Query: 451 GYSPTSPG-----YSPTSPGYSPTSPTYS 522
Y+ +SPG YSP+SP YSPTSP Y+
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTSPLYA 1613
Score = 85.9 bits (211), Expect = 2e-15
Identities = 50/100 (50%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSDAQFSPYVGGMAFSPSS------S 405
G +P+ S S T SP Y + N SP + + + Y G A+SPSS S
Sbjct: 1632 GYSPSASGYSPT-------SPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNS 1684
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP Y+P
Sbjct: 1685 PSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP 1724
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/92 (51%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMM-SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P SP S P S + + SP SP S +SP ++SP+S P YSPSSP
Sbjct: 1644 SPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSP-SSTNYSP--NSPSYSPTS-PSYSPSSP 1699
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+P +P+YSP
Sbjct: 1700 SYSPTSPCYSPTSPSYSPTSPNYTPATPSYSP 1731
Score = 71.2 bits (173), Expect = 4e-11
Identities = 49/104 (47%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVS-----GTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS----- 402
+P+ SP S TP + SPNY SP+ SP S A G +SP+S
Sbjct: 1712 SPSYSPTSPNYTPATPSYSPT-SPNYSASPHY--SPASPAYSQT---GAKYSPTSPTYSP 1765
Query: 403 -SPGY--SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP Y SP SP Y+P SP YSP SP YSPTSP YSP+SP +SP
Sbjct: 1766 PSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSP 1809
Score = 70.9 bits (172), Expect = 5e-11
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S P H SP+ SP + ++SP + +SPSS+ YSP+SP
Sbjct: 1797 SPLYSPSS--PQH----SPSNQYSPTGSTYSATSPRYSPNMS--IYSPSSTK-YSPTSPT 1847
Query: 433 YSPTSPGYSPTSPGYSPTSPG-YSPTSPTYSP 525
Y+PT+ YSPTSP YSPT+P YSPTSP YSP
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Score = 69.3 bits (168), Expect = 2e-10
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPG-YS 480
SP Y SPNM + S ++SP +SP Y+P++ YSPTSP YSPT+P YS
Sbjct: 1824 SPRY--SPNMSIYSPSSTKYSP----------TSPTYTPTARNYSPTSPMYSPTAPSHYS 1871
Query: 481 PTSPGYSPTSPTY 519
PTSP YSP+SPT+
Sbjct: 1872 PTSPAYSPSSPTF 1884
Score = 67.8 bits (164), Expect = 4e-10
Identities = 48/125 (38%), Positives = 59/125 (47%), Gaps = 23/125 (18%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMM----SPNYLLSPNMRLSPMSDAQFSPYVGGMA 387
P Y F +P+ + Y G S NY SPN + +SP +
Sbjct: 1645 PVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNY--SPNSPSYSPTSPSYSP--SSPS 1700
Query: 388 FSPSS------SPGYSPSSPGYSPTSPGYSPTSPG------YSPTSPG-------YSPTS 510
+SP+S SP YSP+SP Y+P +P YSPTSP YSP SP YSPTS
Sbjct: 1701 YSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTS 1760
Query: 511 PTYSP 525
PTYSP
Sbjct: 1761 PTYSP 1765
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS------SSPGYSPSSPGYSPTSPGYSPT 465
SP Y SP L S Q SP +SP+ +SP YSP+ YSP+S YSPT
Sbjct: 1790 SPKY--SPTSPLYSPSSPQHSP---SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 1844
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP Y+PT+ YSPTSP YSP
Sbjct: 1845 SPTYTPTARNYSPTSPMYSP 1864
Score = 61.2 bits (147), Expect = 4e-08
Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLL-SPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA S T SP Y SP+ SP S Q++P G +SP+S P YSP+SP
Sbjct: 1743 SPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSP-QYTP--GSPQYSPAS-PKYSPTSP 1798
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP +SP++ YSPT YS TSP YSP
Sbjct: 1799 LYSPSSPQHSPSNQ-YSPTGSTYSATSPRYSP 1829
[155][TOP]
>UniRef100_Q29IN2 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q29IN2_DROPS
Length = 1889
Score = 144 bits (362), Expect = 5e-33
Identities = 99/209 (47%), Positives = 122/209 (58%), Gaps = 35/209 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 1408 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 1467
Query: 181 NDEMLKNAIEL--QLPSYMDG-----LEFGMTPARSP------------VSGTPYHEGMM 303
+ E + IE+ L S M G + G TP+ +P P H M
Sbjct: 1468 DAEKCRFGIEIPNTLGSSMLGGTAMFIGGGSTPSMTPPMTPWVNCNTPRYFSPPGHVSAM 1527
Query: 304 SPNYLLSPNMRLSPMSDA-----QFSPYVGGMAFS---PSSSPGY--SPS-SPGYSPTSP 450
+P P+ S SDA +SP G + S PS SP Y SPS SP YSPTSP
Sbjct: 1528 TPG---GPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSP 1584
Query: 451 GYSPTSPG-----YSPTSPGYSPTSPTYS 522
Y+ +SPG YSP+SP YSPTSP Y+
Sbjct: 1585 NYTASSPGGASPNYSPSSPNYSPTSPLYA 1613
Score = 85.9 bits (211), Expect = 2e-15
Identities = 50/100 (50%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSDAQFSPYVGGMAFSPSS------S 405
G +P+ S S T SP Y + N SP + + + Y G A+SPSS S
Sbjct: 1632 GYSPSASGYSPT-------SPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNS 1684
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP Y+P
Sbjct: 1685 PSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP 1724
Score = 85.1 bits (209), Expect = 3e-15
Identities = 47/92 (51%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMM-SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P SP S P S + + SP SP S +SP ++SP+S P YSPSSP
Sbjct: 1644 SPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSP-SSTNYSP--NSPSYSPTS-PSYSPSSP 1699
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+P +P+YSP
Sbjct: 1700 SYSPTSPCYSPTSPSYSPTSPNYTPATPSYSP 1731
Score = 71.2 bits (173), Expect = 4e-11
Identities = 49/104 (47%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVS-----GTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS----- 402
+P+ SP S TP + SPNY SP+ SP S A G +SP+S
Sbjct: 1712 SPSYSPTSPNYTPATPSYSPT-SPNYSASPHY--SPASPAYSQT---GAKYSPTSPTYSP 1765
Query: 403 -SPGY--SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP Y SP SP Y+P SP YSP SP YSPTSP YSP+SP +SP
Sbjct: 1766 PSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSP 1809
Score = 70.9 bits (172), Expect = 5e-11
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S P H SP+ SP + ++SP + +SPSS+ YSP+SP
Sbjct: 1797 SPLYSPSS--PQH----SPSNQYSPTGSTYSATSPRYSPNMS--IYSPSSTK-YSPTSPT 1847
Query: 433 YSPTSPGYSPTSPGYSPTSPG-YSPTSPTYSP 525
Y+PT+ YSPTSP YSPT+P YSPTSP YSP
Sbjct: 1848 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1879
Score = 69.3 bits (168), Expect = 2e-10
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPG-YS 480
SP Y SPNM + S ++SP +SP Y+P++ YSPTSP YSPT+P YS
Sbjct: 1824 SPRY--SPNMSIYSPSSTKYSP----------TSPTYTPTARNYSPTSPMYSPTAPSHYS 1871
Query: 481 PTSPGYSPTSPTY 519
PTSP YSP+SPT+
Sbjct: 1872 PTSPAYSPSSPTF 1884
Score = 67.8 bits (164), Expect = 4e-10
Identities = 48/125 (38%), Positives = 59/125 (47%), Gaps = 23/125 (18%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMM----SPNYLLSPNMRLSPMSDAQFSPYVGGMA 387
P Y F +P+ + Y G S NY SPN + +SP +
Sbjct: 1645 PVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNY--SPNSPSYSPTSPSYSP--SSPS 1700
Query: 388 FSPSS------SPGYSPSSPGYSPTSPGYSPTSPG------YSPTSPG-------YSPTS 510
+SP+S SP YSP+SP Y+P +P YSPTSP YSP SP YSPTS
Sbjct: 1701 YSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPTS 1760
Query: 511 PTYSP 525
PTYSP
Sbjct: 1761 PTYSP 1765
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS------SSPGYSPSSPGYSPTSPGYSPT 465
SP Y SP L S Q SP +SP+ +SP YSP+ YSP+S YSPT
Sbjct: 1790 SPKY--SPTSPLYSPSSPQHSP---SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 1844
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP Y+PT+ YSPTSP YSP
Sbjct: 1845 SPTYTPTARNYSPTSPMYSP 1864
Score = 61.2 bits (147), Expect = 4e-08
Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLL-SPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA S T SP Y SP+ SP S Q++P G +SP+S P YSP+SP
Sbjct: 1743 SPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSP-QYTP--GSPQYSPAS-PKYSPTSP 1798
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP +SP++ YSPT YS TSP YSP
Sbjct: 1799 LYSPSSPQHSPSNQ-YSPTGSTYSATSPRYSP 1829
[156][TOP]
>UniRef100_B4R347 RNA polymerase II 215kD subunit n=1 Tax=Drosophila simulans
RepID=B4R347_DROSI
Length = 552
Score = 144 bits (362), Expect = 5e-33
Identities = 96/210 (45%), Positives = 124/210 (59%), Gaps = 35/210 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 73 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 132
Query: 181 NDEMLKNAIEL--QLPSYMDG-----LEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRL 339
+ E + IE+ L + M G + G TP+ +P TP+ +P Y SP +
Sbjct: 133 DAEKCRFGIEIPNTLGNSMLGGAAMFIGGGSTPSMTPPM-TPW-VNCNTPRY-FSPPGHV 189
Query: 340 SPMSDAQFSPYVGGMAFSPSS-------SPGYSPSSPGYSPTSPG--------------- 453
S M+ GG +FSPS+ SP +SP+ PG SP+SPG
Sbjct: 190 SAMTP-------GGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 242
Query: 454 -YSPTSPGYSPTSPG-----YSPTSPTYSP 525
YSPTSP Y+ +SPG YSP+SP YSP
Sbjct: 243 SYSPTSPNYTASSPGGASPNYSPSSPNYSP 272
Score = 85.5 bits (210), Expect = 2e-15
Identities = 49/100 (49%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSDAQFSPYVGGMAFSPSSS------ 405
G +P+ S S T SP Y + + SP + + + Y G A+SPSSS
Sbjct: 295 GYSPSSSGYSPT-------SPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNS 347
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP Y+P
Sbjct: 348 PSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP 387
Score = 72.4 bits (176), Expect = 2e-11
Identities = 45/106 (42%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMM----SPNYLLSPNMRLSPMSDAQFSPYVGGMA 387
P Y +F +P+ + Y G S NY SPN + +SP +
Sbjct: 308 PGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNY--SPNSPSYSPTSPSYSP--SSPS 363
Query: 388 FSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP+S P YSP+SP YSPTSP Y+P +P YSPTSP YS SP YSP
Sbjct: 364 YSPTS-PCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSP 407
Score = 71.6 bits (174), Expect = 3e-11
Identities = 47/100 (47%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+TP+ SP S PNY SP + SP S A G+ +SP+S SP
Sbjct: 388 VTPSYSPTS----------PNYSASP--QYSPASPAYSQT---GVKYSPTSPTYSPPSPS 432
Query: 412 Y--SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y SP SP Y+P SP YSP SP YSPTSP YSP+SP +SP
Sbjct: 433 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSP 472
Score = 68.6 bits (166), Expect = 3e-10
Identities = 43/92 (46%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S P H SP+ SP + ++SP + +SPSS+ YSP+SP
Sbjct: 460 SPLYSPSS--PQH----SPSNQYSPTGSTYSATSPRYSPNMS--IYSPSSTK-YSPTSPT 510
Query: 433 YSPTSPGYSPTSPGYSPTSPG-YSPTSPTYSP 525
Y+PT+ YSPTSP YSPT+P YSP SP YSP
Sbjct: 511 YTPTARNYSPTSPMYSPTAPSHYSPKSPAYSP 542
Score = 67.0 bits (162), Expect = 8e-10
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPG-YS 480
SP Y SPNM + S ++SP +SP Y+P++ YSPTSP YSPT+P YS
Sbjct: 487 SPRY--SPNMSIYSPSSTKYSP----------TSPTYTPTARNYSPTSPMYSPTAPSHYS 534
Query: 481 PTSPGYSPTSPTY 519
P SP YSP+SPT+
Sbjct: 535 PKSPAYSPSSPTF 547
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS------SSPGYSPSSPGYSPTSPGYSPT 465
SP Y SP L S Q SP +SP+ +SP YSP+ YSP+S YSPT
Sbjct: 453 SPKY--SPTSPLYSPSSPQHSP---SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 507
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP Y+PT+ YSPTSP YSP
Sbjct: 508 SPTYTPTARNYSPTSPMYSP 527
Score = 62.0 bits (149), Expect = 2e-08
Identities = 45/103 (43%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLL-SPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y ++ +PA S T SP Y SP+ SP S Q++P G +SP
Sbjct: 397 PNYSASPQY--SPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSP-QYTP--GSPQYSP 451
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSP+SP +SP++ YSPT YS TSP YSP
Sbjct: 452 AS-PKYSPTSPLYSPSSPQHSPSNQ-YSPTGSTYSATSPRYSP 492
Score = 60.8 bits (146), Expect = 5e-08
Identities = 44/95 (46%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSP-YVGGMAFSPSSSPGYSPSS 426
+P+ SP S P + SP+Y SPN S + SP Y +SP+S P YS +
Sbjct: 361 SPSYSPTS--PCYSPT-SPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPAS-PAYSQTG 416
Query: 427 PGYSPTSPGYSPTSPGY--SPTSPGYSPTSPTYSP 525
YSPTSP YSP SP Y SP SP Y+P SP YSP
Sbjct: 417 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 451
[157][TOP]
>UniRef100_B4IK28 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
RepID=B4IK28_DROSE
Length = 1887
Score = 144 bits (362), Expect = 5e-33
Identities = 96/210 (45%), Positives = 124/210 (59%), Gaps = 35/210 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 1408 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 1467
Query: 181 NDEMLKNAIEL--QLPSYMDG-----LEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRL 339
+ E + IE+ L + M G + G TP+ +P TP+ +P Y SP +
Sbjct: 1468 DAEKCRFGIEIPNTLGNSMLGGAAMFIGGGSTPSMTPPM-TPW-VNCNTPRY-FSPPGHV 1524
Query: 340 SPMSDAQFSPYVGGMAFSPSS-------SPGYSPSSPGYSPTSPG--------------- 453
S M+ GG +FSPS+ SP +SP+ PG SP+SPG
Sbjct: 1525 SAMTP-------GGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 1577
Query: 454 -YSPTSPGYSPTSPG-----YSPTSPTYSP 525
YSPTSP Y+ +SPG YSP+SP YSP
Sbjct: 1578 SYSPTSPNYTASSPGGASPNYSPSSPNYSP 1607
Score = 85.5 bits (210), Expect = 2e-15
Identities = 49/100 (49%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSP-MSDAQFSPYVGGMAFSPSSS------ 405
G +P+ S S T SP Y + + SP + + + Y G A+SPSSS
Sbjct: 1630 GYSPSSSGYSPT-------SPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNS 1682
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP Y+P
Sbjct: 1683 PSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP 1722
Score = 72.4 bits (176), Expect = 2e-11
Identities = 45/106 (42%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMM----SPNYLLSPNMRLSPMSDAQFSPYVGGMA 387
P Y +F +P+ + Y G S NY SPN + +SP +
Sbjct: 1643 PGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNY--SPNSPSYSPTSPSYSP--SSPS 1698
Query: 388 FSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP+S P YSP+SP YSPTSP Y+P +P YSPTSP YS SP YSP
Sbjct: 1699 YSPTS-PCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSP 1742
Score = 71.6 bits (174), Expect = 3e-11
Identities = 47/100 (47%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+TP+ SP S PNY SP + SP S A G+ +SP+S SP
Sbjct: 1723 VTPSYSPTS----------PNYSASP--QYSPASPAYSQT---GVKYSPTSPTYSPPSPS 1767
Query: 412 Y--SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y SP SP Y+P SP YSP SP YSPTSP YSP+SP +SP
Sbjct: 1768 YDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSP 1807
Score = 70.9 bits (172), Expect = 5e-11
Identities = 44/92 (47%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP S P H SP+ SP + ++SP + +SPSS+ YSP+SP
Sbjct: 1795 SPLYSPSS--PQH----SPSNQYSPTGSTYSATSPRYSPNMS--IYSPSSTK-YSPTSPT 1845
Query: 433 YSPTSPGYSPTSPGYSPTSPG-YSPTSPTYSP 525
Y+PT+ YSPTSP YSPT+P YSPTSP YSP
Sbjct: 1846 YTPTARNYSPTSPMYSPTAPSHYSPTSPAYSP 1877
Score = 69.3 bits (168), Expect = 2e-10
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPG-YS 480
SP Y SPNM + S ++SP +SP Y+P++ YSPTSP YSPT+P YS
Sbjct: 1822 SPRY--SPNMSIYSPSSTKYSP----------TSPTYTPTARNYSPTSPMYSPTAPSHYS 1869
Query: 481 PTSPGYSPTSPTY 519
PTSP YSP+SPT+
Sbjct: 1870 PTSPAYSPSSPTF 1882
Score = 64.7 bits (156), Expect = 4e-09
Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS------SSPGYSPSSPGYSPTSPGYSPT 465
SP Y SP L S Q SP +SP+ +SP YSP+ YSP+S YSPT
Sbjct: 1788 SPKY--SPTSPLYSPSSPQHSP---SNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 1842
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP Y+PT+ YSPTSP YSP
Sbjct: 1843 SPTYTPTARNYSPTSPMYSP 1862
Score = 62.0 bits (149), Expect = 2e-08
Identities = 45/103 (43%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLL-SPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y ++ +PA S T SP Y SP+ SP S Q++P G +SP
Sbjct: 1732 PNYSASPQY--SPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSP-QYTP--GSPQYSP 1786
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSP+SP +SP++ YSPT YS TSP YSP
Sbjct: 1787 AS-PKYSPTSPLYSPSSPQHSPSNQ-YSPTGSTYSATSPRYSP 1827
Score = 60.8 bits (146), Expect = 5e-08
Identities = 44/95 (46%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSP-YVGGMAFSPSSSPGYSPSS 426
+P+ SP S P + SP+Y SPN S + SP Y +SP+S P YS +
Sbjct: 1696 SPSYSPTS--PCYSPT-SPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPAS-PAYSQTG 1751
Query: 427 PGYSPTSPGYSPTSPGY--SPTSPGYSPTSPTYSP 525
YSPTSP YSP SP Y SP SP Y+P SP YSP
Sbjct: 1752 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSP 1786
[158][TOP]
>UniRef100_Q2HDK0 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2HDK0_CHAGB
Length = 1756
Score = 144 bits (362), Expect = 5e-33
Identities = 97/239 (40%), Positives = 119/239 (49%), Gaps = 64/239 (26%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILL+AAA E D RG++EN+MLGQ+AP+GTG ++ L
Sbjct: 1411 RHGINRADTGALMRCSFEETVEILLEAAAVGELDDCRGISENVMLGQMAPMGTGHFDVLL 1470
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSG------TPY----------HEGMMSPN 312
+ +ML+ I D G+ P + G TPY H G SP
Sbjct: 1471 DPKMLETVIS-------DNSRMGLMPNMTIKGGQLEGAATPYDTGSPMADNGHLGSYSPT 1523
Query: 313 ---------------------------------YLLSPNMRLSPMSDAQFSPYVGGMAFS 393
Y SP SP S + SP+ G +S
Sbjct: 1524 MGNFSPIQGAGSDSPNGFGTEYGGGFGSSTVNPYATSPR-ATSPFSTSPTSPFSYGGGYS 1582
Query: 394 PSSSPGYSP------------SSPGYSPTSPGYSPTSPGY---SPTSPGYSPTSPTYSP 525
P+S GYSP SSP +SP+SP +SPTSP SPTSP YSPTSP+YSP
Sbjct: 1583 PTSPAGYSPTSPLLDAGGRYASSPQFSPSSPSFSPTSPMLRPGSPTSPNYSPTSPSYSP 1641
Score = 70.5 bits (171), Expect = 7e-11
Identities = 43/94 (45%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMR-LSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
+P+ SP S SPNY SP+ SP + +SP F+ +SP YSP+S
Sbjct: 1612 SPSFSPTSPMLRPGSPTSPNYSPTSPSYSPASPAATRHYSP-TSPQQFNSPTSPSYSPTS 1670
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSP-TYSP 525
P YSP SP TSP YSP SP +SPTSP YSP
Sbjct: 1671 PSYSPASPNLHATSPSYSPASPTWSPTSPDAYSP 1704
Score = 64.3 bits (155), Expect = 5e-09
Identities = 40/90 (44%), Positives = 50/90 (55%), Gaps = 19/90 (21%)
Frame = +1
Query: 304 SPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGY--------SPTSPGY 456
SP+Y SPN+ + S + SP +SP+S YSP+SP + SPTSPGY
Sbjct: 1670 SPSYSPASPNLHATSPSYSPASP-----TWSPTSPDAYSPTSPSFHRSPGQQMSPTSPGY 1724
Query: 457 SPTSPGYSPTSPG----------YSPTSPT 516
SPTSP +SP +PG YSPTSPT
Sbjct: 1725 SPTSPSFSPRTPGRGPSGGSGDQYSPTSPT 1754
Score = 62.8 bits (151), Expect = 1e-08
Identities = 43/105 (40%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
Frame = +1
Query: 253 TPARSPVS-GTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGM-AFSPS---SSPGYS 417
+P+ SP S H SP SP + +SP + A SPS +SP +S
Sbjct: 1636 SPSYSPASPAATRHYSPTSPQQFNSPTSPSYSPTSPSYSPASPNLHATSPSYSPASPTWS 1695
Query: 418 PSSP-GYSPTSPGY--------SPTSPGYSPTSPGYSPTSPTYSP 525
P+SP YSPTSP + SPTSPGYSPTSP +SP +P P
Sbjct: 1696 PTSPDAYSPTSPSFHRSPGQQMSPTSPGYSPTSPSFSPRTPGRGP 1740
[159][TOP]
>UniRef100_Q0D054 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0D054_ASPTN
Length = 1742
Score = 144 bits (362), Expect = 5e-33
Identities = 96/244 (39%), Positives = 122/244 (50%), Gaps = 69/244 (28%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D G LMRCSFEETV+ILL+AAA+ E D RGV+EN++LGQ+AP GTG+ ++YL
Sbjct: 1413 RHGINRADNGALMRCSFEETVEILLEAAAFGELDDCRGVSENLILGQMAPAGTGEFDIYL 1472
Query: 181 NDEMLK------------NAIELQLPSYMDG----LEFGMTPARSPVSGTPYHEGMMSP- 309
+ +L AI + DG + G S GTP + SP
Sbjct: 1473 DQNLLNTVVSNNARYGVMGAIGAKDAIISDGAATQYDTGSPMQESAYIGTPDPDSNFSPI 1532
Query: 310 ----------------------NYLLSPNMRLSPMSDAQFSPYVGGM---AFSPSS---- 402
+ +P SP+ + SP+ GG ++SPSS
Sbjct: 1533 RQAGAESPGGFTEYQPTAGFGGGFSPAPT---SPLGYSPGSPFSGGATSPSYSPSSSYSP 1589
Query: 403 -------------SPGYSPSSPGYSPTSPGY----------SPTSPGYSPTSPGYSPTSP 513
SPG+SP+SP + PTSP Y SPTSP YSPTSPG+SPTSP
Sbjct: 1590 TSPGMGITSPRMTSPGFSPASPAFGPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSP 1649
Query: 514 TYSP 525
YSP
Sbjct: 1650 NYSP 1653
Score = 66.2 bits (160), Expect = 1e-09
Identities = 54/115 (46%), Positives = 63/115 (54%), Gaps = 25/115 (21%)
Frame = +1
Query: 244 FGMTPARSPVSGTPYHEGMM--SPNYL-LSPNMR-----LSPMSDAQF--SPYVG-GMAF 390
+G SP S +P G SPNY SPN+ SP S + SP +G G
Sbjct: 1627 YGQASPTSP-SYSPTSPGFSPTSPNYSPTSPNLSPASPVFSPTSPSYSPTSPALGAGRNM 1685
Query: 391 SPSS--SPGYSPSSPGYSPTSP----------GYSPTSPG--YSPTSPGYSPTSP 513
SP+S SP Y+P+SPG+SPTSP G SPTSPG YSPTSP YSPTSP
Sbjct: 1686 SPTSPTSPKYTPTSPGWSPTSPQSYSPTSPNIGGSPTSPGGAYSPTSPTYSPTSP 1740
Score = 65.9 bits (159), Expect = 2e-09
Identities = 51/126 (40%), Positives = 61/126 (48%), Gaps = 32/126 (25%)
Frame = +1
Query: 244 FGMT-PARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMA--FSPSSSPG 411
FG T PA SP S SP+Y SP + + + SP + + FSP+S P
Sbjct: 1613 FGPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPNLSPASPVFSPTS-PS 1671
Query: 412 YSPSSPGY---------SPTSPGYSPTSPGYSPTSP-------------------GYSPT 507
YSP+SP SPTSP Y+PTSPG+SPTSP YSPT
Sbjct: 1672 YSPTSPALGAGRNMSPTSPTSPKYTPTSPGWSPTSPQSYSPTSPNIGGSPTSPGGAYSPT 1731
Query: 508 SPTYSP 525
SPTYSP
Sbjct: 1732 SPTYSP 1737
[160][TOP]
>UniRef100_C8VQG7 DNA-directed RNA polymerase (EC 2.7.7.6)
[Source:UniProtKB/TrEMBL;Acc:Q873Q6] n=2 Tax=Emericella
nidulans RepID=C8VQG7_EMENI
Length = 1745
Score = 144 bits (362), Expect = 5e-33
Identities = 90/210 (42%), Positives = 114/210 (54%), Gaps = 35/210 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D G LMRCSFEETV+ILL+AAA+ E D RGV+EN++LGQ+AP GTG+ ++YL
Sbjct: 1412 RHGINRADNGALMRCSFEETVEILLEAAAFGELDDCRGVSENLILGQMAPAGTGEFDIYL 1471
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEG--MMSPNYL--LSPNMRLSPM 348
+ ML + + G S + T Y G M Y+ P+ SP+
Sbjct: 1472 DQNMLNTVVSNNARYGVMGALGAKDAIISDGAATQYDTGSPMQESAYIGTPDPDSNFSPI 1531
Query: 349 SDA---------QFSPYVGGMAFSP--SSSPGYSPSSP-GYSPTSPGYSP---------- 462
A ++ P G FSP +S GYSPSSP +PTSPGYSP
Sbjct: 1532 RQAGAETPGGFTEYQPSGGFGGFSPAATSPAGYSPSSPFSANPTSPGYSPTSSYSPTSPG 1591
Query: 463 ---------TSPGYSPTSPGYSPTSPTYSP 525
TSPG+SP SP ++PTSP YSP
Sbjct: 1592 MGITSPRFMTSPGFSPASPSFAPTSPAYSP 1621
Score = 89.4 bits (220), Expect = 1e-16
Identities = 50/103 (48%), Positives = 62/103 (60%), Gaps = 12/103 (11%)
Frame = +1
Query: 253 TPARSPVSG---TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------- 402
+P SP S T G+ SP ++ SP + S A SP A+SP+S
Sbjct: 1576 SPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSP-----AYSPTSPAYGQAS 1630
Query: 403 --SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSP+SPG+SPTSP YSPTSP +SPTSP +SPTSP+YSP
Sbjct: 1631 PTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSYSP 1673
Score = 70.9 bits (172), Expect = 5e-11
Identities = 51/116 (43%), Positives = 63/116 (54%), Gaps = 22/116 (18%)
Frame = +1
Query: 244 FGMTPARSPVSGTPYHEGMM--SPNYL--------LSPNMRLSPMSDAQFSPYVGGMA-F 390
+G SP S +P G SPNY SP + S + SP +GG
Sbjct: 1626 YGQASPTSP-SYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSYSPTSPAIGGARHL 1684
Query: 391 SPSS--SPGYSPSSPGYSPTSPG-YSPTSPGYS--------PTSPGYSPTSPTYSP 525
SP+S SP Y+P+SPG+SPTSP YSPTSP ++ PTSPGYSPTSP +SP
Sbjct: 1685 SPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSP 1740
Score = 68.6 bits (166), Expect = 3e-10
Identities = 48/108 (44%), Positives = 57/108 (52%), Gaps = 17/108 (15%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP+Y SP S FSP +SP+S P +SP+SP
Sbjct: 1616 SPAYSPTSPAYGQASPTSPSY--------SPTSPG-FSPTSPN--YSPTS-PSFSPTSPA 1663
Query: 433 YSPTSPGYSPTSPG----------------YSPTSPGYSPTSP-TYSP 525
+SPTSP YSPTSP Y+PTSPG+SPTSP TYSP
Sbjct: 1664 FSPTSPSYSPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQTYSP 1711
Score = 53.5 bits (127), Expect = 9e-06
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 8/66 (12%)
Frame = +1
Query: 319 LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYS--------PTSPGYSPTSPG 474
LSP SP +++P G +SP+S YSP+SP ++ PTSPGYSPTSP
Sbjct: 1684 LSPTSPTSP----KYTPTSPG--WSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPA 1737
Query: 475 YSPTSP 492
+SPTSP
Sbjct: 1738 FSPTSP 1743
[161][TOP]
>UniRef100_B0XMU6 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
RepID=B0XMU6_ASPFC
Length = 1750
Score = 143 bits (361), Expect = 6e-33
Identities = 97/249 (38%), Positives = 119/249 (47%), Gaps = 74/249 (29%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D G LMRCSFEETV+ILL+AAA+ E D RGV+EN++LGQ+AP GTG+ +LYL
Sbjct: 1412 RHGINRADNGALMRCSFEETVEILLEAAAFGELDDCRGVSENLILGQMAPAGTGEFDLYL 1471
Query: 181 NDEMLKNAIELQLPSYMDG----------------LEFGMTPARSPVSGTPYHEGMMSP- 309
+ +L + + G + G S GTP E SP
Sbjct: 1472 DQNLLNTVVSNNARFGVMGTIGAKDAIISDGAATQYDTGSPMQESAFIGTPDPESAFSPI 1531
Query: 310 --------------------------------NYLLSPNMRLSPMS-----DAQFSPYVG 378
Y S +P S + +SP
Sbjct: 1532 RQAGAESPGGFTEYQPTGGFGGGFSPAATSPAGYSPSSPFSANPTSPGYSPTSSYSPTSP 1591
Query: 379 GM-----------AFSPSS------SPGYSPSSPGY---SPTSPGYSPTSPGYSPTSPGY 498
GM FSP+S SP YSP+SP Y SPTSP YSPTSPG+SPTSP Y
Sbjct: 1592 GMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNY 1651
Query: 499 SPTSPTYSP 525
SPTSP++SP
Sbjct: 1652 SPTSPSFSP 1660
Score = 87.4 bits (215), Expect = 5e-16
Identities = 49/103 (47%), Positives = 61/103 (59%), Gaps = 12/103 (11%)
Frame = +1
Query: 253 TPARSPVSG---TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------- 402
+P SP S T G+ SP ++ SP + S A SP A+SP+S
Sbjct: 1577 SPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSP-----AYSPTSPAYGQAS 1631
Query: 403 --SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP
Sbjct: 1632 PTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSP 1674
Score = 70.9 bits (172), Expect = 5e-11
Identities = 51/117 (43%), Positives = 63/117 (53%), Gaps = 23/117 (19%)
Frame = +1
Query: 244 FGMTPARSPVSGTPYHEGMM--SPNYL--------LSPNMRLSPMSDAQFSPYVGGMA-- 387
+G SP S +P G SPNY SP + S + SP +GG
Sbjct: 1627 YGQASPTSP-SYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRH 1685
Query: 388 FSPSS--SPGYSPSSPGYSPTSPG-YSPTSPGYS--------PTSPGYSPTSPTYSP 525
SP+S SP Y+P+SPG+SPTSP YSPTSP ++ PTSPGYSPTSP +SP
Sbjct: 1686 LSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSP 1742
Score = 68.2 bits (165), Expect = 3e-10
Identities = 48/109 (44%), Positives = 57/109 (52%), Gaps = 18/109 (16%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP+Y SP S FSP +SP+S P +SP+SP
Sbjct: 1617 SPAYSPTSPAYGQASPTSPSY--------SPTSPG-FSPTSPN--YSPTS-PSFSPASPA 1664
Query: 433 YSPTSPGYSPTSPG-----------------YSPTSPGYSPTSP-TYSP 525
+SPTSP YSPTSP Y+PTSPG+SPTSP TYSP
Sbjct: 1665 FSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSP 1713
[162][TOP]
>UniRef100_A2QAT7 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QAT7_ASPNC
Length = 1747
Score = 143 bits (361), Expect = 6e-33
Identities = 99/250 (39%), Positives = 122/250 (48%), Gaps = 75/250 (30%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D G LMRCSFEETV+ILL+AAA+ E D RGV+EN++LGQ+AP GTG+ ++YL
Sbjct: 1411 RHGINRADNGALMRCSFEETVEILLEAAAFGELDDCRGVSENLILGQMAPAGTGEFDIYL 1470
Query: 181 NDEMLK------------NAIELQLPSYMDG----LEFGMTPARSPVSGTPYHEGMMSP- 309
+ ++ AI + DG + G S GTP E SP
Sbjct: 1471 DQNLMNTVVSNNARFGVMGAIGAKDAIISDGAATQYDTGSPMQESAYIGTPDPESNFSPI 1530
Query: 310 --------------------------------NYLLSPNMRLSPMS-----DAQFSPYVG 378
Y S +P S + +SP
Sbjct: 1531 RQAGAETPGGFTEYQPTGGFGGGFSPAATSPAGYSPSSPFSANPTSPGYSPTSSYSPTSP 1590
Query: 379 GMA------------FSPSS------SPGYSPSSPGY---SPTSPGYSPTSPGYSPTSPG 495
GMA FSP+S SP YSP+SP Y SPTSP YSPTSPG+SPTSP
Sbjct: 1591 GMAITSPRFMSTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPN 1650
Query: 496 YSPTSPTYSP 525
YSPTSP++SP
Sbjct: 1651 YSPTSPSFSP 1660
Score = 82.8 bits (203), Expect = 1e-14
Identities = 50/104 (48%), Positives = 62/104 (59%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVSG-TPYHEGMM--SPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSS------ 402
+P SP S +P GM SP ++ SP + S A SP A+SP+S
Sbjct: 1576 SPGYSPTSSYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSP-----AYSPTSPAYGQA 1630
Query: 403 ---SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP
Sbjct: 1631 SPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSP 1674
Score = 72.0 bits (175), Expect = 2e-11
Identities = 52/117 (44%), Positives = 64/117 (54%), Gaps = 23/117 (19%)
Frame = +1
Query: 244 FGMTPARSPVSGTPYHEGMM--SPNYL--------LSPNMRLSPMSDAQFSPYVGGMA-- 387
+G SP S +P G SPNY SP + S + SP VGG+
Sbjct: 1627 YGQASPTSP-SYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAVGGVGRH 1685
Query: 388 FSPSS--SPGYSPSSPGYSPTSPG-YSPTSPGYS--------PTSPGYSPTSPTYSP 525
SP+S SP Y+P+SPG+SPTSP YSPTSP ++ PTSPGYSPTSP +SP
Sbjct: 1686 LSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSP 1742
Score = 71.2 bits (173), Expect = 4e-11
Identities = 47/102 (46%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP+Y SP + +SP +FSP+S P +SP+SP
Sbjct: 1617 SPAYSPTSPAYGQASPTSPSY--SPTSPGFSPTSPNYSPT--SPSFSPAS-PAFSPTSPS 1671
Query: 433 YSPTSPGY----------SPTSPGYSPTSPGYSPTSP-TYSP 525
YSPTSP SPTSP Y+PTSPG+SPTSP TYSP
Sbjct: 1672 YSPTSPAVGGVGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSP 1713
Score = 67.0 bits (162), Expect = 8e-10
Identities = 45/103 (43%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +PA + T SP Y + SP S + +SP G FSP+S P YSP+S
Sbjct: 1605 GFSPASPSFAPTSPAYSPTSPAY-----GQASPTSPS-YSPTSPG--FSPTS-PNYSPTS 1655
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGY----------SPTSPTYSP 525
P +SP SP +SPTSP YSPTSP SPTSP Y+P
Sbjct: 1656 PSFSPASPAFSPTSPSYSPTSPAVGGVGRHLSPTSPTSPKYTP 1698
Score = 65.1 bits (157), Expect = 3e-09
Identities = 43/91 (47%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Frame = +1
Query: 253 TPARSPVSGT--PYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
+PA SP S + P + LSP SP +++P G +SP+S YSP+S
Sbjct: 1662 SPAFSPTSPSYSPTSPAVGGVGRHLSPTSPTSP----KYTPTSPG--WSPTSPQTYSPTS 1715
Query: 427 PGY--SPTSPGYSPTSPGYSPTSPGYSPTSP 513
P + SPTSPG PTSPGYSPTSP +SPTSP
Sbjct: 1716 PNFAGSPTSPG-GPTSPGYSPTSPAFSPTSP 1745
[163][TOP]
>UniRef100_A1D1U9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D1U9_NEOFI
Length = 1750
Score = 143 bits (361), Expect = 6e-33
Identities = 97/249 (38%), Positives = 119/249 (47%), Gaps = 74/249 (29%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D G LMRCSFEETV+ILL+AAA+ E D RGV+EN++LGQ+AP GTG+ +LYL
Sbjct: 1412 RHGINRADNGALMRCSFEETVEILLEAAAFGELDDCRGVSENLILGQMAPAGTGEFDLYL 1471
Query: 181 NDEMLKNAIELQLPSYMDG----------------LEFGMTPARSPVSGTPYHEGMMSP- 309
+ +L + + G + G S GTP E SP
Sbjct: 1472 DQNLLSTVVSNNARFGVMGTIGAKDAIISDGAATQYDTGSPMQESAYIGTPDPESAFSPI 1531
Query: 310 --------------------------------NYLLSPNMRLSPMS-----DAQFSPYVG 378
Y S +P S + +SP
Sbjct: 1532 RQAGAESPGGFTEYQPTGGFGGGFSPAATSPAGYSPSSPFSANPTSPGYSPTSSYSPTSP 1591
Query: 379 GM-----------AFSPSS------SPGYSPSSPGY---SPTSPGYSPTSPGYSPTSPGY 498
GM FSP+S SP YSP+SP Y SPTSP YSPTSPG+SPTSP Y
Sbjct: 1592 GMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNY 1651
Query: 499 SPTSPTYSP 525
SPTSP++SP
Sbjct: 1652 SPTSPSFSP 1660
Score = 87.4 bits (215), Expect = 5e-16
Identities = 49/103 (47%), Positives = 61/103 (59%), Gaps = 12/103 (11%)
Frame = +1
Query: 253 TPARSPVSG---TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------- 402
+P SP S T G+ SP ++ SP + S A SP A+SP+S
Sbjct: 1577 SPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSP-----AYSPTSPAYGQAS 1631
Query: 403 --SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP
Sbjct: 1632 PTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSP 1674
Score = 70.9 bits (172), Expect = 5e-11
Identities = 51/117 (43%), Positives = 63/117 (53%), Gaps = 23/117 (19%)
Frame = +1
Query: 244 FGMTPARSPVSGTPYHEGMM--SPNYL--------LSPNMRLSPMSDAQFSPYVGGMA-- 387
+G SP S +P G SPNY SP + S + SP +GG
Sbjct: 1627 YGQASPTSP-SYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRH 1685
Query: 388 FSPSS--SPGYSPSSPGYSPTSPG-YSPTSPGYS--------PTSPGYSPTSPTYSP 525
SP+S SP Y+P+SPG+SPTSP YSPTSP ++ PTSPGYSPTSP +SP
Sbjct: 1686 LSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSP 1742
Score = 68.2 bits (165), Expect = 3e-10
Identities = 48/109 (44%), Positives = 57/109 (52%), Gaps = 18/109 (16%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP+Y SP S FSP +SP+S P +SP+SP
Sbjct: 1617 SPAYSPTSPAYGQASPTSPSY--------SPTSPG-FSPTSPN--YSPTS-PSFSPASPA 1664
Query: 433 YSPTSPGYSPTSPG-----------------YSPTSPGYSPTSP-TYSP 525
+SPTSP YSPTSP Y+PTSPG+SPTSP TYSP
Sbjct: 1665 FSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSP 1713
[164][TOP]
>UniRef100_B0DB45 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0DB45_LACBS
Length = 1742
Score = 142 bits (358), Expect = 1e-32
Identities = 100/250 (40%), Positives = 123/250 (49%), Gaps = 75/250 (30%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+IL++AAA E D GV EN+M GQ+AP+GTG E+ L
Sbjct: 1397 RHGINRADTGALMRCSFEETVEILMEAAAVGEKDDCHGVAENVMFGQMAPMGTGAFEVAL 1456
Query: 181 NDEMLKNAI-------ELQLPSYMDGLEFGMTPARSPVSGTPY-------HEGMMS---P 309
+ +MLK+AI + L + +DG GMTP + V+ TPY H+ +
Sbjct: 1457 DIDMLKDAIVDHRLPVQSMLAAQIDG---GMTPGQ--VAMTPYDTNSPVWHDNLFKGDPA 1511
Query: 310 NYLLSP---------------NMRLSPMSDAQFSPYVGGMAFSPSS-------------- 402
+ SP SP+ SP GG +SPSS
Sbjct: 1512 SASFSPLASNGGEDAANFQYLGFGQSPLGAGGMSP--GGPGYSPSSPNVYSPTSPSFVPQ 1569
Query: 403 -----------------------------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPG 495
SP YSP+SP + TSPGYSPTSP YSPTSP
Sbjct: 1570 SPFGGATSPFGTSPYAASPYYDPSARNPTSPTYSPTSPALNLTSPGYSPTSPRYSPTSPS 1629
Query: 496 YSPTSPTYSP 525
+SPTSP YSP
Sbjct: 1630 FSPTSPRYSP 1639
[165][TOP]
>UniRef100_B2AA31 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2AA31_PODAN
Length = 1748
Score = 140 bits (354), Expect = 4e-32
Identities = 98/235 (41%), Positives = 124/235 (52%), Gaps = 60/235 (25%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILL+AAA E D RG++EN+MLGQ+AP+GTG E+ L
Sbjct: 1411 RHGINRADTGALMRCSFEETVEILLEAAAVGELDDCRGISENVMLGQMAPMGTGHFEVLL 1470
Query: 181 NDEMLKNAI----ELQLPSYM----DGLEFGMTP--ARSPVSGTPYHEGMMSPN------ 312
+ +ML+ I + L + M + LE TP SP++ Y G SP
Sbjct: 1471 DPKMLETVISDNSRMGLMAGMTIKGNQLEGAATPYDTGSPMADNGYLGGSYSPTMGNFSP 1530
Query: 313 ----------------------------YLLSPNMRLSPMSDAQFSPYVGGMAFSPSS-S 405
Y SP SP + + SP+ G +SP+S +
Sbjct: 1531 IVGNESGGPPGFASEYGGGGYGSSSVNPYATSPGRPTSPFTTSPTSPFSYG--YSPTSPA 1588
Query: 406 PGYSP------------SSPGYSPTSPGYSPTSPGY---SPTSPGYSPTSPTYSP 525
GYSP SSP +SP+SP +SPTSP SPTSP YSPTSP+YSP
Sbjct: 1589 AGYSPTSPLIDAGGRFASSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSP 1643
Score = 70.9 bits (172), Expect = 5e-11
Identities = 45/101 (44%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Frame = +1
Query: 253 TPARSPVS-GTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S H SP SP + +SP AF ++SP YSP+SP
Sbjct: 1638 SPSYSPASPAATRHYSPTSPAQFQSPTSPSYSPTSPSYSP--ASPAFQ-ATSPSYSPASP 1694
Query: 430 GYSPTSP-GYSPTSPGY--------SPTSPGYSPTSPTYSP 525
+SPTSP YSPTSP + SPTSPGYSPTSP++SP
Sbjct: 1695 NWSPTSPDAYSPTSPTFQRSPGQQMSPTSPGYSPTSPSFSP 1735
Score = 70.5 bits (171), Expect = 7e-11
Identities = 43/92 (46%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P P S T SP+Y SP SP + +SP SP+S P YSP+SP
Sbjct: 1621 SPMLRPGSPTSPSYSPTSPSY--SP---ASPAATRHYSPTSPAQFQSPTS-PSYSPTSPS 1674
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSP-TYSP 525
YSP SP + TSP YSP SP +SPTSP YSP
Sbjct: 1675 YSPASPAFQATSPSYSPASPNWSPTSPDAYSP 1706
Score = 66.2 bits (160), Expect = 1e-09
Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Frame = +1
Query: 235 GLEFGMTPARSPVSGT-PYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPG 411
G F +P SP S + M+ P SP+ + S + SP +SP+S
Sbjct: 1601 GGRFASSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASP-AATRHYSPTSPAQ 1659
Query: 412 Y-SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+ SP+SP YSPTSP YSP SP + TSP YSP SP +SP
Sbjct: 1660 FQSPTSPSYSPTSPSYSPASPAFQATSPSYSPASPNWSP 1698
[166][TOP]
>UniRef100_UPI000023F34A hypothetical protein FG00916.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023F34A
Length = 1758
Score = 140 bits (353), Expect = 5e-32
Identities = 98/248 (39%), Positives = 119/248 (47%), Gaps = 73/248 (29%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILL+AAA E D RG++EN+MLGQ+AP+GTG+ ++ L
Sbjct: 1409 RHGINRADTGALMRCSFEETVEILLEAAATGELDDCRGISENVMLGQMAPMGTGNFDVLL 1468
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSG--TPYHEG--MMSPNYL---------- 318
+ +ML+ I + GL GM + G TPY G M YL
Sbjct: 1469 DPKMLETVIS---DNSRMGLMAGMPTKSGDIEGAATPYDTGSPMADSGYLSMSSPAAGNF 1525
Query: 319 --------------------------------------LSPNMRLSPMSDAQFSPYVGGM 384
SP SP S +SP M
Sbjct: 1526 SPIQGAGSDTPAGFDTVYGGGSVGFGGTTPMSPYNRGAASPFSSTSPTSPFSYSPTSPNM 1585
Query: 385 AFSPSS--------------SPGYSPSSPGYSPTSP---GYSPTSPGYSPTSPGYSPTSP 513
+SP+S SP +SPSSP +SPTSP SP SP YSPTSP YSPTSP
Sbjct: 1586 GYSPTSPLIDGGGMGRYGPTSPSFSPSSPSFSPTSPMLRPTSPASPSYSPTSPSYSPTSP 1645
Query: 514 T----YSP 525
+ YSP
Sbjct: 1646 SSPRHYSP 1653
Score = 70.1 bits (170), Expect = 9e-11
Identities = 45/98 (45%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMR-LSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
+P+ SP S SP+Y SP+ SP S +SP F+ +SP YSP+S
Sbjct: 1613 SPSFSPTSPMLRPTSPASPSYSPTSPSYSPTSPSSPRHYSP-TSPAQFNSPTSPSYSPAS 1671
Query: 427 PGYSPTSPGY----SPTSPGYSPTSPGYSPTSP-TYSP 525
P YSPTSP PTSP YSP SP +SPTSP YSP
Sbjct: 1672 PNYSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAYSP 1709
Score = 69.7 bits (169), Expect = 1e-10
Identities = 50/104 (48%), Positives = 59/104 (56%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVS-GTPYHEGMMSPNYLLSPNM-RLSPMSD--AQFSPYVGGMAFSPSSSPGYSP 420
+P+ SP S +P H SP SP SP S + SP V G A P+S P YSP
Sbjct: 1637 SPSYSPTSPSSPRHYSPTSPAQFNSPTSPSYSPASPNYSPTSPNVHG-AGGPTS-PSYSP 1694
Query: 421 SSPGYSPTSP-GYSPTSPGY--------SPTSPGYSPTSPTYSP 525
+SP +SPTSP YSPTSP + SPTSP YSPTSP +SP
Sbjct: 1695 ASPSWSPTSPEAYSPTSPTFQRSPTTQQSPTSPSYSPTSPAFSP 1738
[167][TOP]
>UniRef100_B8M2Y2 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500
RepID=B8M2Y2_TALSN
Length = 1755
Score = 140 bits (353), Expect = 5e-32
Identities = 88/210 (41%), Positives = 114/210 (54%), Gaps = 35/210 (16%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D G LMRCSFEETV+ILL+AAA+ E D RGV+EN++LGQLAP GTG+ ++YL
Sbjct: 1413 RHGINRADNGALMRCSFEETVEILLEAAAFGELDDCRGVSENLILGQLAPAGTGEFDVYL 1472
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPY--HEGMMSPNYL--LSPNMRLSPM 348
+ ML + + G + + T Y + MM Y+ P+ + SP+
Sbjct: 1473 DQNMLNTVVSSNTGIGLMGGLGAKDAMINDGAATQYDNNSPMMENGYIGTPDPDAKFSPI 1532
Query: 349 SDA-----------QFSPYVGGMAFSPSSSPGYSPSSP-GYSPTSPGYSP---------- 462
A Q S +GG + +P S GYSP+SP SP SPGYSP
Sbjct: 1533 RQAGSETPAGFTSYQPSQGLGGFSPAPQSPGGYSPTSPFNTSPVSPGYSPSSSYSPASPG 1592
Query: 463 ---------TSPGYSPTSPGYSPTSPTYSP 525
TSPG+SP+SP + TSP YSP
Sbjct: 1593 MSITSPRFVTSPGFSPSSPNFQTTSPAYSP 1622
Score = 76.3 bits (186), Expect = 1e-12
Identities = 46/101 (45%), Positives = 60/101 (59%), Gaps = 9/101 (8%)
Frame = +1
Query: 250 MTPARSPVSG-TPYHEGMM--SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------ 402
++P SP S +P GM SP ++ SP S + SP A+SP+S
Sbjct: 1576 VSPGYSPSSSYSPASPGMSITSPRFVTSPGFSPSSPNFQTTSP-----AYSPTSPSYQQA 1630
Query: 403 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSP+SP +SP+SP YSP+SP S +SP +SPTSPTYSP
Sbjct: 1631 SPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSP 1671
Score = 68.9 bits (167), Expect = 2e-10
Identities = 53/121 (43%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLS-----PMSD--AQFSPYV 375
PSY +P+ SP S SPNY SPNM LS P S + SP +
Sbjct: 1625 PSYQQA-----SPSYSPTSP---RFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAI 1676
Query: 376 GGMA-FSPSSSPGYSPSSPGYSPTSPGY----------SPTSPGYSPTSPGYSPTSPTYS 522
GG FS +SP YSP+SP +SPTSP SPTSP TSP YSPTSP Y+
Sbjct: 1677 GGTRQFSSPTSPKYSPASPAWSPTSPEIYSPTSPNIHGSPTSPARGGTSPSYSPTSPQYN 1736
Query: 523 P 525
P
Sbjct: 1737 P 1737
Score = 66.6 bits (161), Expect = 1e-09
Identities = 49/100 (49%), Positives = 58/100 (58%), Gaps = 9/100 (9%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNM-RLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+PA SP S + Y + SP+Y SP R SP S +SP M+ S SP +SP+SP
Sbjct: 1617 SPAYSPTSPS-YQQA--SPSY--SPTSPRFSP-SSPNYSPSSPNMSLS---SPAFSPTSP 1667
Query: 430 GYSPTSPGY-------SPTSPGYSPTSPGYSPTSP-TYSP 525
YSPTSP SPTSP YSP SP +SPTSP YSP
Sbjct: 1668 TYSPTSPAIGGTRQFSSPTSPKYSPASPAWSPTSPEIYSP 1707
[168][TOP]
>UniRef100_Q7SDN0 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q7SDN0_NEUCR
Length = 1752
Score = 139 bits (350), Expect = 1e-31
Identities = 101/236 (42%), Positives = 127/236 (53%), Gaps = 61/236 (25%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILL+AAA E D RG++EN+MLGQ+AP+GTG +++L
Sbjct: 1414 RHGINRADTGALMRCSFEETVEILLEAAAVGELDDCRGISENVMLGQMAPMGTGAFDVFL 1473
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSG--TPYHEG--MMSPNYL--LSPNM-RL 339
+ +ML+ I + GL GMT S + G TPY G M +L SP M
Sbjct: 1474 DPKMLETVIS---DNSRMGLMPGMTVKGSQLDGAATPYDTGSPMADSGFLGSYSPTMGNF 1530
Query: 340 SPMSDA-QFSP--------------YVGGMAFSPSSSP---------------GYSPSSP 429
SP+ A SP Y G ++S ++SP GYSPSSP
Sbjct: 1531 SPIQGAGSDSPTNNGFGTDYGGVGGYGSGTSYSSATSPRATSPFTPTSPFSYGGYSPSSP 1590
Query: 430 --GYSP------------TSPGYSPTSPGY----------SPTSPGYSPTSPTYSP 525
GYSP +SP +SP+SP + SPTSP YSPTSP+YSP
Sbjct: 1591 AAGYSPSSPLLDSAGRFASSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSP 1646
Score = 74.7 bits (182), Expect = 4e-12
Identities = 43/93 (46%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S SP+Y SP+ + + A++SP FSP+S P YSP+SP
Sbjct: 1617 SPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAAARYSPTSPAQQFSPTS-PSYSPTSP 1675
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSP-TYSP 525
YSP SP + TSP YSP SP +SPTSP YSP
Sbjct: 1676 SYSPASPAFQATSPSYSPASPTWSPTSPDAYSP 1708
Score = 74.3 bits (181), Expect = 5e-12
Identities = 51/112 (45%), Positives = 62/112 (55%), Gaps = 23/112 (20%)
Frame = +1
Query: 259 ARSPVSGT-PYHEGMMSPNYLLSPNMRLSPMSDA--------QFSPYVGGMAFSPSS--- 402
A SP + T P+ G SP+ + SP+ D+ QFSP +FSP+S
Sbjct: 1570 ATSPFTPTSPFSYGGYSPSSPAAGYSPSSPLLDSAGRFASSPQFSP--SSPSFSPTSPML 1627
Query: 403 ------SPGYSPSSPGYSPTSPG---YSPTSPG--YSPTSPGYSPTSPTYSP 525
SP YSP+SP YSP SP YSPTSP +SPTSP YSPTSP+YSP
Sbjct: 1628 RPGSPTSPSYSPTSPSYSPASPAAARYSPTSPAQQFSPTSPSYSPTSPSYSP 1679
Score = 67.8 bits (164), Expect = 4e-10
Identities = 45/101 (44%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S SP SP + +SP AF ++SP YSP+SP
Sbjct: 1641 SPSYSPASPAAARYSPTSPAQQFSPTSPSYSPTSPSYSP--ASPAFQ-ATSPSYSPASPT 1697
Query: 433 YSPTSP-GYSPTSPGY--------SPTSP-GYSPTSPTYSP 525
+SPTSP YSPTSP + SPTSP GYSPTSP YSP
Sbjct: 1698 WSPTSPDAYSPTSPSFQRSPGQQLSPTSPTGYSPTSPQYSP 1738
[169][TOP]
>UniRef100_A1CNZ4 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CNZ4_ASPCL
Length = 1765
Score = 139 bits (350), Expect = 1e-31
Identities = 90/215 (41%), Positives = 115/215 (53%), Gaps = 40/215 (18%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D G LMRCSFEETV+ILL+AAA+ E D RGV+EN++LGQ+AP GTG+ +LYL
Sbjct: 1415 RHGINRADNGALMRCSFEETVEILLEAAAFGELDDCRGVSENLILGQMAPAGTGEFDLYL 1474
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEG--MMSPNYL--LSPNMRLSPM 348
+ +L + + G S + T Y G M Y+ P+ SP+
Sbjct: 1475 DQTLLNTVVSNNARFGVMGAIGAKDAIISDGAATQYDTGSPMQESAYIGTPDPDSAFSPI 1534
Query: 349 SDA---------QFSPYVG-GMAFSP--SSSPGYSPSSP-GYSPTSPGYSP--------- 462
A ++ P G G FSP +S GYSP+SP +PTSPGYSP
Sbjct: 1535 GQAGAETPGGFTEYQPTGGFGGGFSPAATSPAGYSPTSPFSANPTSPGYSPTTSYSPIAP 1594
Query: 463 --------------TSPGYSPTSPGYSPTSPTYSP 525
TSPG+SP SP ++PTSP YSP
Sbjct: 1595 GITSPRFNTSPGFMTSPGFSPVSPSFAPTSPAYSP 1629
Score = 86.7 bits (213), Expect = 9e-16
Identities = 49/106 (46%), Positives = 61/106 (57%), Gaps = 15/106 (14%)
Frame = +1
Query: 253 TPARSPVSG-TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMA-----FSPSS---- 402
+P SP + +P G+ SP + SP SP FSP A +SP+S
Sbjct: 1580 SPGYSPTTSYSPIAPGITSPRFNTSPGFMTSP----GFSPVSPSFAPTSPAYSPTSPAYG 1635
Query: 403 -----SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP
Sbjct: 1636 QASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSP 1681
Score = 70.9 bits (172), Expect = 5e-11
Identities = 51/117 (43%), Positives = 63/117 (53%), Gaps = 23/117 (19%)
Frame = +1
Query: 244 FGMTPARSPVSGTPYHEGMM--SPNYL--------LSPNMRLSPMSDAQFSPYVGGMA-- 387
+G SP S +P G SPNY SP + S + SP +GG
Sbjct: 1634 YGQASPTSP-SYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRH 1692
Query: 388 FSPSS--SPGYSPSSPGYSPTSPG-YSPTSPGYS--------PTSPGYSPTSPTYSP 525
SP+S SP Y+P+SPG+SPTSP YSPTSP ++ PTSPGYSPTSP +SP
Sbjct: 1693 LSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSP 1749
Score = 68.2 bits (165), Expect = 3e-10
Identities = 48/109 (44%), Positives = 57/109 (52%), Gaps = 18/109 (16%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP+Y SP S FSP +SP+S P +SP+SP
Sbjct: 1624 SPAYSPTSPAYGQASPTSPSY--------SPTSPG-FSPTSPN--YSPTS-PSFSPASPA 1671
Query: 433 YSPTSPGYSPTSPG-----------------YSPTSPGYSPTSP-TYSP 525
+SPTSP YSPTSP Y+PTSPG+SPTSP TYSP
Sbjct: 1672 FSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSP 1720
[170][TOP]
>UniRef100_Q5KGG3 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KGG3_CRYNE
Length = 1786
Score = 139 bits (349), Expect = 2e-31
Identities = 92/230 (40%), Positives = 117/230 (50%), Gaps = 55/230 (23%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D G L R +FEETV+ILL+AAA + D +GV EN++LGQ+AP+GTG ++ L
Sbjct: 1399 RHGINRTDAGALSRAAFEETVEILLEAAAVGDVDDCKGVAENVLLGQMAPMGTGAFDVSL 1458
Query: 181 NDEMLKNAI-ELQLP---SYMDGLEFGMTP------------------------ARSPVS 276
+ MLK+ I + +LP G+ GMTP A SP+
Sbjct: 1459 DMNMLKDVIVDHRLPVQNMMAGGMAGGMTPGGAMTPYDNLSPMWGGDKGALGHAAFSPIQ 1518
Query: 277 G----------------TPYHEGMMSPNYLLSPNMRLSPMSD--------AQFSPYVGGM 384
+P H GM Y S SP S + SP+ G
Sbjct: 1519 SSANDEGGNFAYMGYGQSPMHGGMSPAGYSPSSPAGYSPTSPFAVTSPAYSPTSPFAGAA 1578
Query: 385 AFSPS---SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
A + S GY +SP YSPTSP YSPTSP +SPTSP +SP+SPTYSP
Sbjct: 1579 AGAASPWVGRGGYGATSPAYSPTSPQYSPTSPQFSPTSPSFSPSSPTYSP 1628
Score = 81.3 bits (199), Expect = 4e-14
Identities = 54/106 (50%), Positives = 61/106 (57%), Gaps = 15/106 (14%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNM-RLSPMSDAQFSPYVGGMAFSPSS--------- 402
+PA SP S G+ SP Y SP R SP S A FSP ++SP+S
Sbjct: 1649 SPAYSPTSPMG---GITSPQY--SPTSPRYSPTSPA-FSPT--SPSYSPTSPAPFQATSP 1700
Query: 403 -----SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP +SP+SP YSP SP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1701 RYSPTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPAYSPTSPAYSP 1746
Score = 80.9 bits (198), Expect = 5e-14
Identities = 49/89 (55%), Positives = 54/89 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S + Y +P SP R SP S QFSP +SP YSP+SP
Sbjct: 1677 SPAFSPTSPS-YSPTSPAPFQATSP--RYSPTSP-QFSP----------TSPTYSPASPA 1722
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTY 519
YSPTSP YSPTSP YSPTSP YSPTSP Y
Sbjct: 1723 YSPTSPQYSPTSPAYSPTSPAYSPTSPAY 1751
Score = 75.1 bits (183), Expect = 3e-12
Identities = 46/98 (46%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S P + SP+ S + + SP GG +SP YSP+SP
Sbjct: 1595 SPAYSPTS--PQYSPTSPQFSPTSPSFSPSSPTYSPASPAYGGAGAGNRASP-YSPTSPA 1651
Query: 433 YSPTSP-------GYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP +SPTSP+YSP
Sbjct: 1652 YSPTSPMGGITSPQYSPTSPRYSPTSPAFSPTSPSYSP 1689
Score = 60.8 bits (146), Expect = 5e-08
Identities = 36/80 (45%), Positives = 45/80 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S P+ SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1684 SPSYSPTSPAPFQA--TSPRY--SPTSPQFSPTSPTYSP--ASPAYSPTS-PQYSPTSPA 1736
Query: 433 YSPTSPGYSPTSPGYSPTSP 492
YSPTSP YSPTSP Y +P
Sbjct: 1737 YSPTSPAYSPTSPAYGGAAP 1756
[171][TOP]
>UniRef100_Q1WKU2 Putative RNA polymerase II 215 kD subunit (Fragment) n=1
Tax=Drosophila simulans RepID=Q1WKU2_DROSI
Length = 746
Score = 138 bits (347), Expect = 3e-31
Identities = 90/190 (47%), Positives = 116/190 (61%), Gaps = 16/190 (8%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETVD+L+DAAA+AETD +RGV+ENI++GQL +GTG +L L
Sbjct: 550 RHGINRQDTGALMRCSFEETVDVLMDAAAHAETDPMRGVSENIIMGQLPKMGTGCFDLLL 609
Query: 181 NDEMLKNAIEL--QLPSYMDG-----LEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRL 339
+ E + IE+ L + M G + G TP+ +P TP+ +P Y SP +
Sbjct: 610 DAEKCRFGIEIPNTLGNSMLGGAAMFIGGGSTPSMTPPM-TPW-VNCNTPRY-FSPPGHV 666
Query: 340 SPMSDAQFSPYVGGMAFSPSS-------SPGYSPSSPGYSPTSPG--YSPTSPGYSPTSP 492
S M+ GG +FSPS+ SP +SP+ PG SP+SPG SP P SP
Sbjct: 667 SAMTP-------GGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSP 719
Query: 493 GYSPTSPTYS 522
YSPTSP Y+
Sbjct: 720 SYSPTSPNYT 729
[172][TOP]
>UniRef100_A4RMP1 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4RMP1_MAGGR
Length = 1757
Score = 137 bits (346), Expect = 4e-31
Identities = 97/235 (41%), Positives = 121/235 (51%), Gaps = 60/235 (25%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILL+AAA E D RG++EN+MLGQLAP+GTG E+ L
Sbjct: 1408 RHGINRADTGALMRCSFEETVEILLEAAAIGELDDCRGISENVMLGQLAPMGTGAFEVLL 1467
Query: 181 NDEMLKNAIELQL-PSYMDGL-------EFGMTP--ARSPVSGTPYHEGMMSPNY-LLSP 327
+ +ML+ + M GL E TP SP+ + Y+ GM SP SP
Sbjct: 1468 DPKMLETVVSNNARMGLMPGLTVKGSSAEGAATPYDTGSPMGDSGYNLGMASPTMGNFSP 1527
Query: 328 NMR--------------------------------LSPMSDAQFSPYVGGM-AFSPSS-S 405
M SP S + SP+ G ++SP+S
Sbjct: 1528 IMSGGSDTPTGFATEYGGGSLGSMNPYGSGTSPRPTSPFSTSPTSPFSAGYGSYSPTSPM 1587
Query: 406 PGYSPSSP-----GYSPTSPGYSPTSPGYSPTSP----------GYSPTSPTYSP 525
GYSP+SP Y +SP +SP+SP + PTSP GYSPTSPTY P
Sbjct: 1588 AGYSPTSPMMDGGRYGASSPSFSPSSPSFQPTSPIMRHGAGDSMGYSPTSPTYQP 1642
Score = 60.1 bits (144), Expect = 9e-08
Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Frame = +1
Query: 241 EFGMTPAR---SPVSGTPYHEGMMSPNYLLSPNMRLSPMS-DAQFSPYVGGMAFSPSSSP 408
+FG +P SP S + G SP Y + SP S +A +SP SP+ +
Sbjct: 1659 QFGASPTSPLYSPASPSFSPGGATSPMYYVGSPQHASPTSPNAHYSPTSPSFQRSPAQA- 1717
Query: 409 GYSPSSPG-YSPTSPGYSPTSPGYSPTSPG---YSPTSPTY 519
SP+SPG YSPTSP +SP SPG + S G YSPTSP++
Sbjct: 1718 --SPTSPGPYSPTSPSFSPRSPGRNNRSGGQDSYSPTSPSH 1756
Score = 55.8 bits (133), Expect = 2e-06
Identities = 48/113 (42%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
P+Y G G SP S + SP Y SP S + FSP GG +
Sbjct: 1638 PTYQPGSPTGGDNHYSPTSPAQFGASPTSPLY--------SPASPS-FSP--GG-----A 1681
Query: 400 SSPGYSPSSPGY-SPTSPG--YSPTSPGY-------SPTSPG-YSPTSPTYSP 525
+SP Y SP + SPTSP YSPTSP + SPTSPG YSPTSP++SP
Sbjct: 1682 TSPMYYVGSPQHASPTSPNAHYSPTSPSFQRSPAQASPTSPGPYSPTSPSFSP 1734
[173][TOP]
>UniRef100_C9SR21 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SR21_9PEZI
Length = 1756
Score = 137 bits (345), Expect = 5e-31
Identities = 100/254 (39%), Positives = 121/254 (47%), Gaps = 79/254 (31%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILL+AAA E D RG++EN+MLGQ+AP+GTG E+ L
Sbjct: 1406 RHGINRADTGALMRCSFEETVEILLEAAAVGELDDCRGISENVMLGQMAPMGTGHFEVLL 1465
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSG-------TPY----------------- 288
+ +ML+ I D G+ P PV G TPY
Sbjct: 1466 DPKMLETVIS-------DNSRMGLVPG-MPVKGGEMGGAATPYDTGSPLDSGYLSLGSPS 1517
Query: 289 -HEGMMSP-----------------------------------NYLLSPNMRLSPMSDA- 357
+EG SP + SP S + A
Sbjct: 1518 SNEGNFSPIVGAGSDDNTGFGTEYGGTYGGFGGASPGRAGATSPFTTSPTSPFSSFAGAG 1577
Query: 358 QFSPYVGGMAFSPSS-----------SPGYSPSSPGYSPTSPGY---SPTSPGYSPTSPG 495
+SP G +SP+S SP +SPSSP +SPTSP + SP SP YSPTSP
Sbjct: 1578 GYSPTSPGGGYSPTSPLMDGGARYATSPQFSPSSPSFSPTSPVHRPTSPASPNYSPTSPS 1637
Query: 496 YSPTSPT----YSP 525
YSPTSPT YSP
Sbjct: 1638 YSPTSPTSPRHYSP 1651
Score = 75.1 bits (183), Expect = 3e-12
Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Frame = +1
Query: 253 TPARSPVSGT-PYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S T P H SP SP + +SP + + +SP YSP+SP
Sbjct: 1635 SPSYSPTSPTSPRHYSPTSPAQFNSPTSPSYSPASPSYSPTSPNLHGAGPTSPSYSPASP 1694
Query: 430 GYSPTSP--GYSPTSPGY-------SPTSPGYSPTSPTYSP 525
+SPTSP YSPTSP + SPTSP YSPTSP++SP
Sbjct: 1695 SWSPTSPEHSYSPTSPSFQRPAMQQSPTSPNYSPTSPSFSP 1735
Score = 60.5 bits (145), Expect = 7e-08
Identities = 38/65 (58%), Positives = 43/65 (66%), Gaps = 9/65 (13%)
Frame = +1
Query: 358 QFSPYVGGMAFSPSSSPGYS---PSSPGYSPTSPGYSPTSP----GYSPTSPGY--SPTS 510
QFSP +FSP+S P + P+SP YSPTSP YSPTSP YSPTSP SPTS
Sbjct: 1606 QFSP--SSPSFSPTS-PVHRPTSPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTS 1662
Query: 511 PTYSP 525
P+YSP
Sbjct: 1663 PSYSP 1667
[174][TOP]
>UniRef100_B6QAY2 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224
RepID=B6QAY2_PENMQ
Length = 1744
Score = 137 bits (345), Expect = 5e-31
Identities = 87/211 (41%), Positives = 114/211 (54%), Gaps = 36/211 (17%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D G LMRCSFEETV+ILL+AAA+ E D RGV+EN++LGQLAP GTG+ ++YL
Sbjct: 1413 RHGINRADNGALMRCSFEETVEILLEAAAFGELDDCRGVSENLILGQLAPAGTGEFDVYL 1472
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPY--HEGMMSPNYL--LSPNMRLSPM 348
+ +L + + G + + T Y + MM Y+ P+ + SP+
Sbjct: 1473 DQSLLNTVVSSNTGIGLMGGLGAKDAMINDGAATQYDNNSPMMENGYIGTPDPDAKFSPI 1532
Query: 349 SDA-----------QFSPYVGGMAFSPSSSPGYSPSSP-GYSPTSPGYSP---------- 462
A Q S +GG + +P S GYSP+SP SP SPGYSP
Sbjct: 1533 RQAGAETPGGFTAYQPSGGLGGFSPAPQSPGGYSPTSPFNTSPVSPGYSPSSSYSPSSPN 1592
Query: 463 ----------TSPGYSPTSPGYSPTSPTYSP 525
TSPG+SP SP ++ TSP YSP
Sbjct: 1593 MSVTSPRFMSTSPGFSPQSPAFAITSPAYSP 1623
Score = 73.6 bits (179), Expect = 8e-12
Identities = 44/87 (50%), Positives = 51/87 (58%), Gaps = 13/87 (14%)
Frame = +1
Query: 304 SPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSS--SPGYSPSSPGYSPTSPGY------ 456
SPN+ SP S + + SP +GG FSPSS SP YSP+SPG+SPTSP
Sbjct: 1653 SPNFSPASPAFSPSSPTYSPTSPAIGGRQFSPSSPSSPKYSPASPGWSPTSPEIYSPTSP 1712
Query: 457 ----SPTSPGYSPTSPGYSPTSPTYSP 525
SPTSP TSP YSPTSP Y+P
Sbjct: 1713 NIHGSPTSPARGATSPSYSPTSPQYNP 1739
Score = 66.2 bits (160), Expect = 1e-09
Identities = 41/83 (49%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
Frame = +1
Query: 304 SPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYS 480
SP Y SP+ + + S + SP FSPSS P YSPSSP +SP SP +SP+SP YS
Sbjct: 1618 SPAYSPTSPSFQATSPSYSPTSP-----RFSPSS-PNYSPSSPNFSPASPAFSPSSPTYS 1671
Query: 481 PTSPGY--------SPTSPTYSP 525
PTSP SP+SP YSP
Sbjct: 1672 PTSPAIGGRQFSPSSPSSPKYSP 1694
[175][TOP]
>UniRef100_C7YI77 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YI77_NECH7
Length = 1750
Score = 135 bits (340), Expect = 2e-30
Identities = 95/240 (39%), Positives = 120/240 (50%), Gaps = 65/240 (27%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+ILL+AAA E D RG++EN+MLGQ+AP+GTG+ ++ L
Sbjct: 1405 RHGINRADTGALMRCSFEETVEILLEAAASGELDDCRGISENVMLGQMAPMGTGNFDVLL 1464
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSG-------TPYHEG--MMSPNYL----- 318
+ +ML+ I D G+ P PV G TPY G M YL
Sbjct: 1465 DPKMLETVIS-------DNSRMGLMPG-MPVKGGEIEGAATPYDTGSPMADSGYLSLSSP 1516
Query: 319 -------------------------------LSP-NMR--LSPMSDAQFSPYVGGMAFSP 396
+SP MR SP + + SP+ G +SP
Sbjct: 1517 AAGNFSPIQGAGSDTPAGFGNTEYGFGGSTAMSPYAMRGGTSPFTTSPTSPFGPGGGYSP 1576
Query: 397 SSSPGYSP--------------SSPGYSPTSPGYSPTSP---GYSPTSPGYSPTSPTYSP 525
+S YSP +SP +SP+SP +SPTSP SP SP YSP+SP YSP
Sbjct: 1577 TSPNAYSPTSPLVDGGMGGRYATSPSFSPSSPSFSPTSPMVRPTSPASPNYSPSSPNYSP 1636
Score = 70.5 bits (171), Expect = 7e-11
Identities = 43/100 (43%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Frame = +1
Query: 253 TPARSPVS-GTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P SP S +P H SP SP + +SP + ++SP YSP+SP
Sbjct: 1631 SPNYSPASPSSPRHYSPTSPAQFNSPTSPNYSPASPNYSPASPNLHAGGTTSPSYSPASP 1690
Query: 430 GYSPTSP-GYSPTSP-------GYSPTSPGYSPTSPTYSP 525
+SPTSP YSPTSP SPTSP YSPTSP +SP
Sbjct: 1691 TWSPTSPEAYSPTSPYQRSPGAQQSPTSPSYSPTSPAFSP 1730
Score = 68.2 bits (165), Expect = 3e-10
Identities = 49/95 (51%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Frame = +1
Query: 259 ARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGY- 435
A SP S P +G M Y SP+ S S + SP V SP+S P YSPSSP Y
Sbjct: 1581 AYSPTS--PLVDGGMGGRYATSPSFSPSSPSFSPTSPMV--RPTSPAS-PNYSPSSPNYS 1635
Query: 436 --SPTSP-GYSPTSPGY--SPTSPGYSPTSPTYSP 525
SP+SP YSPTSP SPTSP YSP SP YSP
Sbjct: 1636 PASPSSPRHYSPTSPAQFNSPTSPNYSPASPNYSP 1670
Score = 61.2 bits (147), Expect = 4e-08
Identities = 37/86 (43%), Positives = 46/86 (53%), Gaps = 15/86 (17%)
Frame = +1
Query: 304 SPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP-------GYSPTSPGYS 459
SPNY SPN+ + +SP +SP+S YSP+SP SPTSP YS
Sbjct: 1665 SPNYSPASPNLHAGGTTSPSYSP--ASPTWSPTSPEAYSPTSPYQRSPGAQQSPTSPSYS 1722
Query: 460 PTSPGYSPTSPG-------YSPTSPT 516
PTSP +SP +PG YSP SP+
Sbjct: 1723 PTSPAFSPRTPGPGSSGNQYSPNSPS 1748
[176][TOP]
>UniRef100_O09451 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bonnemaisonia hamifera
RepID=O09451_9FLOR
Length = 1732
Score = 134 bits (337), Expect = 4e-30
Identities = 89/198 (44%), Positives = 107/198 (54%), Gaps = 24/198 (12%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFE T DILL+AA + E D LRGVTENIMLGQLAPIGTG L L
Sbjct: 1342 RHGVNRVDTGPLMKCSFEGTTDILLEAAMWGERDGLRGVTENIMLGQLAPIGTGSFRLLL 1401
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPAR----------SPVSG--TP----YHEGMMSPN 312
N++MLK+AIE + + G +PA SP G TP + +P
Sbjct: 1402 NEKMLKDAIEPESIDAQASMGLGQSPAGNRTYEGASVWSPARGDATPGRKKAFDARATPG 1461
Query: 313 YLLSPNMRLSPMS-------DAQFSPYVGGMAFSPS-SSPGYSPSSPGYSPTSPGYSPTS 468
L SP +P+ D Q SP G AFSP+ +PG + G +P SP
Sbjct: 1462 LLYSPAAWGTPLRPRTEQGLDQQMSPSADGAAFSPTPMTPGGAGGGGGMGGLTPLQSPGR 1521
Query: 469 PGYSPTSPGYSPTSPTYS 522
P SPG TSP YS
Sbjct: 1522 EYTVPLSPGGGGTSPFYS 1539
Score = 57.0 bits (136), Expect = 8e-07
Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 15/108 (13%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSP--NYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS--SPGY 414
G + + SP S + G SP NY+ + + SP S +SP AFSPSS + GY
Sbjct: 1626 GASRSYSPSSPSYNGRGAASPGANYVAA-SPGYSPSSPGAYSPS-SPAAFSPSSPAAGGY 1683
Query: 415 SPSSPGYSPT----------SPGYSPT-SPGYSPTSPGYSPTSPTYSP 525
SPS+P Y+ SP Y P+ + G SP+SP YSP+SP YSP
Sbjct: 1684 SPSTPAYTANAAANQYSYARSPRYPPSYANGTSPSSPQYSPSSPQYSP 1731
Score = 55.1 bits (131), Expect = 3e-06
Identities = 42/101 (41%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSD---AQFSPYVGGMAFSPSSSPGYSPS 423
+PA P S P SP SP ++ SP Q +P A +S YSPS
Sbjct: 1577 SPAYRPTSPGPSPYAAQSPAQ--SPGVQYSPDKSRVQVQRAPPTAPSAAGGGASRSYSPS 1634
Query: 424 SPGYS---PTSPG--YSPTSPGYSPTSPG-YSPTSP-TYSP 525
SP Y+ SPG Y SPGYSP+SPG YSP+SP +SP
Sbjct: 1635 SPSYNGRGAASPGANYVAASPGYSPSSPGAYSPSSPAAFSP 1675
[177][TOP]
>UniRef100_A8Q5I6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8Q5I6_MALGO
Length = 1607
Score = 134 bits (337), Expect = 4e-30
Identities = 95/269 (35%), Positives = 124/269 (46%), Gaps = 94/269 (34%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR + G LMRC+FEETV+IL++AA+ + D +GV +N++LGQ+AP+GTG +L L
Sbjct: 1193 RHGINRTNQGALMRCTFEETVEILMEAASMGDMDDCKGVGQNVLLGQMAPMGTGSFDLNL 1252
Query: 181 NDEMLKNAIELQLPSYMD------GLEFGMTPARSPVSGTPYHEG--------------- 297
+ +MLK+ I + SY + G++ AR+P TPY G
Sbjct: 1253 DVDMLKDVIVNRDQSYANLWVSKLGMDSDDLGARTPGGMTPYDSGSPNIDDDFRVQQQAS 1312
Query: 298 ------------------------MMSPNYLLSPNMRLSPMSD----------------A 357
M +P SP +P S
Sbjct: 1313 FSPLVQVGGDEGGYGEYLSAGQSPMRTPLGAQSPGYGFAPTSPGYVPTSPAYNATSPALG 1372
Query: 358 QFSPYVGGM-----AFSPSS--------SPGYSPSSPGYSPT------------------ 444
SP+VG A+SP+S SP YSP+SP YSP+
Sbjct: 1373 AMSPWVGAAGATSPAYSPTSPRIFAGATSPSYSPTSPSYSPSSPVIDASNARSTYTSRMS 1432
Query: 445 --SPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1433 PASPNYSPTSPVYSPTSPAYSPTSPQYSP 1461
Score = 81.3 bits (199), Expect = 4e-14
Identities = 51/102 (50%), Positives = 56/102 (54%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
P Y G R SG Y SP Y SP + Q+SP +SP+
Sbjct: 1457 PQYSPTSPAGPRGRRLGASGPKYSP--TSPQY--SPTSPQYSPTSPQYSPT--SPQYSPT 1510
Query: 400 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1511 S-PQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1551
Score = 80.9 bits (198), Expect = 5e-14
Identities = 48/91 (52%), Positives = 54/91 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP P R S ++SP +SP+S P YSP+SP
Sbjct: 1449 SPAYSPTSP------QYSPTSPAGPRGRRLGASGPKYSPT--SPQYSPTS-PQYSPTSPQ 1499
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1500 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1530
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/91 (51%), Positives = 53/91 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T SP Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1480 SPTSPQYSPTSPQYSPTSPQY--SPTSPQYSPTSPQYSPT--SPQYSPTS-PQYSPTSPQ 1534
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1535 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1565
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/91 (51%), Positives = 53/91 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T SP Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1487 SPTSPQYSPTSPQYSPTSPQY--SPTSPQYSPTSPQYSPT--SPQYSPTS-PQYSPTSPQ 1541
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1542 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1572
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/91 (51%), Positives = 53/91 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T SP Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1494 SPTSPQYSPTSPQYSPTSPQY--SPTSPQYSPTSPQYSPT--SPQYSPTS-PQYSPTSPQ 1548
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1549 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1579
Score = 79.7 bits (195), Expect = 1e-13
Identities = 46/90 (51%), Positives = 52/90 (57%), Gaps = 16/90 (17%)
Frame = +1
Query: 304 SPNY-----LLSPNMRLSPMSDAQFSPY-----------VGGMAFSPSSSPGYSPSSPGY 435
SPNY + SP + Q+SP G +SP+S P YSP+SP Y
Sbjct: 1435 SPNYSPTSPVYSPTSPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTS-PQYSPTSPQY 1493
Query: 436 SPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1494 SPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1523
Score = 67.8 bits (164), Expect = 4e-10
Identities = 41/85 (48%), Positives = 48/85 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T SP Y SP + Q+SP +SP+S P YSP+SP
Sbjct: 1501 SPTSPQYSPTSPQYSPTSPQY--SPTSPQYSPTSPQYSPT--SPQYSPTS-PQYSPTSPQ 1555
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPT 507
YSPTSP YSPTSP YSPTSP YSP+
Sbjct: 1556 YSPTSPQYSPTSPQYSPTSPQYSPS 1580
[178][TOP]
>UniRef100_A8N128 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130
RepID=A8N128_COPC7
Length = 1642
Score = 134 bits (337), Expect = 4e-30
Identities = 98/264 (37%), Positives = 126/264 (47%), Gaps = 89/264 (33%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTG LMRCSFEETV+IL++AAA E D G+ EN+M GQ+AP+GTG ++ L
Sbjct: 1344 RHGINRADTGALMRCSFEETVEILMEAAAVGEKDDCHGIAENVMFGQMAPMGTGAFDVAL 1403
Query: 181 NDEMLKNAI-------ELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL------- 318
+ +MLK+AI + L + +DG MTP + V+ TPY SP+++
Sbjct: 1404 DIDMLKDAIVDHRLPVQSMLAAQIDG---AMTPGQ--VAITPY--ATNSPDWIQDEFFKG 1456
Query: 319 -----------------------------------LSPNMRLSPMSDAQFSPYVGGM--- 384
+SP SP S +SP GM
Sbjct: 1457 DSGPSAFSPLASNGAEDTANFQYMSFPQSPHGAGGMSPGPGYSPSSPNAYSPTSPGMVPR 1516
Query: 385 -----------------------------AFSPSS------SPGYSPSSPGYSPTSP-GY 456
+SP+S SP YSP+SPG+SPTSP GY
Sbjct: 1517 SPYGAPTSPFSNQYATSPFYDSRRQATSPTYSPTSPIAGLTSPAYSPTSPGFSPTSPNGY 1576
Query: 457 SPTSPGY-SPTSPGYSPTSPTYSP 525
SP SP + SP SP YSP SP+YSP
Sbjct: 1577 SPQSPNFGSPASPNYSPASPSYSP 1600
Score = 73.2 bits (178), Expect = 1e-11
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMM---SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPS 423
+P + + +P+++ SP Y SP ++ ++ +SP G FSP+S GYSP
Sbjct: 1524 SPFSNQYATSPFYDSRRQATSPTY--SPTSPIAGLTSPAYSPTSPG--FSPTSPNGYSPQ 1579
Query: 424 SPGY-SPTSPGYSPTSPGYSPT--SPGYSPTSPTYSP 525
SP + SP SP YSP SP YSP SP YSP+SPT+SP
Sbjct: 1580 SPNFGSPASPNYSPASPSYSPAPASPNYSPSSPTWSP 1616
Score = 61.6 bits (148), Expect = 3e-08
Identities = 41/100 (41%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Frame = +1
Query: 226 YMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSS 402
+ D +P SP S G+ SP Y SP SP S +SP F +
Sbjct: 1535 FYDSRRQATSPTYSPTSPIA---GLTSPAYSPTSPGF--SPTSPNGYSPQSPN--FGSPA 1587
Query: 403 SPGYSPSSPGYSPT--SPGYSPTSPGYSPTSPGYSPTSPT 516
SP YSP+SP YSP SP YSP+SP +SPTSP + PT
Sbjct: 1588 SPNYSPASPSYSPAPASPNYSPSSPTWSPTSPAHDQNGPT 1627
[179][TOP]
>UniRef100_Q4P7Q0 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4P7Q0_USTMA
Length = 1774
Score = 133 bits (334), Expect = 9e-30
Identities = 89/231 (38%), Positives = 116/231 (50%), Gaps = 56/231 (24%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR + G LMRC+FEETV++L++AA+ + D +GV +N++LGQ+AP+GTG +L L
Sbjct: 1400 RHGINRTNQGALMRCTFEETVELLIEAASMGDVDDCKGVAQNVLLGQMAPMGTGAFDLNL 1459
Query: 181 NDEMLKNAI---ELQLPSYMDGLEFGMTPARSPVSGTPY--------------HEGMMSP 309
+ EMLK+ I L + + ++P + TPY + M SP
Sbjct: 1460 DLEMLKDTIVNHALPYDTLLASRSLDAAGGKTPGAMTPYDSSSPASDDAFRVHEQAMFSP 1519
Query: 310 ------------NYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYS----- 438
+YLLS SPM + G FSP SPGY P+SPGY+
Sbjct: 1520 LAQTGGDEGGYNDYLLSGT---SPMRTPLGAQSPAGYGFSP-VSPGYVPTSPGYATSPAG 1575
Query: 439 -------------PTSPGYSP---------TSPGYSPTSPGYSPTSPTYSP 525
TSP YSP TSP YSPTSP YSP SP YSP
Sbjct: 1576 ALGGMSPWTGNMGATSPAYSPTSPRIFGGATSPSYSPTSPSYSPASPNYSP 1626
Score = 79.7 bits (195), Expect = 1e-13
Identities = 47/91 (51%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA S T + SP Y + + SP S A + GG FSP+S P YSP+SP
Sbjct: 1652 SPASPKFSPTSPNYSPASPAYTPTSPV-YSPTSPAM-AGRGGGKGFSPTS-PAYSPTSPQ 1708
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP SP +SPTSP YSP SP YSPTSP YSP
Sbjct: 1709 YSPASPAFSPTSPQYSPASPQYSPTSPQYSP 1739
Score = 77.8 bits (190), Expect = 4e-13
Identities = 44/95 (46%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL--------LSPNMRLSPMSDAQFSPYVGGMAFSPSSSP 408
+PA SP S + G SP+Y SPN S + A +SP + ++SP
Sbjct: 1591 SPAYSPTSPRIFG-GATSPSYSPTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSP 1649
Query: 409 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP 513
YSP+SP +SPTSP YSP SP Y+PTSP YSPTSP
Sbjct: 1650 QYSPASPKFSPTSPNYSPASPAYTPTSPVYSPTSP 1684
Score = 73.9 bits (180), Expect = 6e-12
Identities = 66/193 (34%), Positives = 78/193 (40%), Gaps = 43/193 (22%)
Frame = +1
Query: 76 DAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYLNDEMLKNAIELQLP-SYMDGLEFGM 252
D+++ A D R V E M LA TG E ND +L ++ P +G
Sbjct: 1499 DSSSPASDDAFR-VHEQAMFSPLAQ--TGGDEGGYNDYLLSGTSPMRTPLGAQSPAGYGF 1555
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSD------------AQFSPYVGGMAFSP 396
+P T SP Y SP L MS + SP + G A SP
Sbjct: 1556 SPVSPGYVPT-------SPGYATSPAGALGGMSPWTGNMGATSPAYSPTSPRIFGGATSP 1608
Query: 397 SSSP--------------------GYSPSSPG----------YSPTSPGYSPTSPGYSPT 486
S SP GYSPSSP YSP SP +SPTSP YSP
Sbjct: 1609 SYSPTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSPQYSPASPKFSPTSPNYSPA 1668
Query: 487 SPGYSPTSPTYSP 525
SP Y+PTSP YSP
Sbjct: 1669 SPAYTPTSPVYSP 1681
[180][TOP]
>UniRef100_Q4UCP5 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4UCP5_THEAN
Length = 1678
Score = 130 bits (327), Expect = 6e-29
Identities = 94/240 (39%), Positives = 116/240 (48%), Gaps = 65/240 (27%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D GPL++CSFEET++ LL AA + E D L+GVTEN+++GQL+P GTG ++ +
Sbjct: 1400 RHGINRADRGPLIKCSFEETLETLLTAAVFGEVDHLKGVTENVIVGQLSPYGTGAFDIMI 1459
Query: 181 NDEMLKNAIELQLPSYMDGLEF---------GMTPAR------------------SPVSG 279
++ L++A + + D L TPA SPV G
Sbjct: 1460 DEVKLRDANQTNAINVADTLGLVSPDSSPLSPSTPATKQTMSPMAFSPTYTSLMMSPVGG 1519
Query: 280 T---PYHEGMMSPNYLL----SPNMRLSPMSDAQ----FSPYVGGMAFSPSSSPGYSPSS 426
P G+M Y L SP SPMS SP A SP SP YSP+S
Sbjct: 1520 IGMGPSTPGLMVDTYALGGSFSPTSPTSPMSPTSPMSPTSPMSPTSAISPVYSPAYSPTS 1579
Query: 427 P--------GYSPTSPGYSPT-----------------SPGYSPTSP--GYSPTSPTYSP 525
P SPTSP YSP SP YSPTSP GY+PTSP YSP
Sbjct: 1580 PMSPTSPTSALSPTSPVYSPAYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPTSPVYSP 1639
Score = 62.0 bits (149), Expect = 2e-08
Identities = 41/94 (43%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS---SPGYSPS 423
T A SP S P + SP S SP+ +SP + ++P+S SP YSP+
Sbjct: 1587 TSALSPTS--PVYSPAYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPTSPVYSPAYSPT 1644
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+P Y GYSPTSP SPTSP YSPT P +SP
Sbjct: 1645 TPNY-----GYSPTSP-LSPTSPAYSPTDP-FSP 1671
[181][TOP]
>UniRef100_Q5CUJ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cryptosporidium parvum
Iowa II RepID=Q5CUJ2_CRYPV
Length = 1902
Score = 130 bits (326), Expect = 7e-29
Identities = 95/254 (37%), Positives = 120/254 (47%), Gaps = 79/254 (31%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D GPL +CSFEETV++L+DAA + ETD L GV+EN+MLGQLAP GT ++ +
Sbjct: 1459 RHGINRVDKGPLQKCSFEETVEVLMDAAMFGETDYLNGVSENVMLGQLAPYGTACFDVLI 1518
Query: 181 NDEMLKN-AIELQL-----------------PSYMDGLEFGMTPARSPVSG--------- 279
+ + L++ A L++ SY D F SP+S
Sbjct: 1519 DPDKLRDTATHLEIHGEFAKLGKFSTLSQTTRSYSDSGAFESDSFESPMSPLSPMSPLYQ 1578
Query: 280 -----TPYHEGMMSPNYL--------LSPNMRLSPMSDAQFSPYVGGMAFSP------SS 402
+P G SP + +SP SP+ + SP M ++P +S
Sbjct: 1579 SYEPMSPMISGQFSPVQMTPRSPMSPVSPGGIFSPVPYSPMSPSSPLMDYTPTSPIYAAS 1638
Query: 403 SP---------------------GYSPS------------SPGYSPTSPGYSPTSPGYSP 483
SP YSPS SP SPTSP YSPTSP YSP
Sbjct: 1639 SPTYNTEVSERARKKYKVNNTLSSYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSP 1698
Query: 484 TSPGYSPTSPTYSP 525
TSP YSPTSP YSP
Sbjct: 1699 TSPHYSPTSPHYSP 1712
Score = 80.9 bits (198), Expect = 5e-14
Identities = 47/92 (51%), Positives = 55/92 (59%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
++P S T H SP+Y SP + +SP +SP+S P YSP+SP
Sbjct: 1682 LSPTSPHYSPTSPHYSPTSPHY--SPTSPHYSPTSPHYSPT--SPHYSPTS-PHYSPTSP 1736
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1737 HYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSP 1768
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/91 (51%), Positives = 54/91 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T H SP+Y SP + +SP +SP+S P YSP+SP
Sbjct: 1697 SPTSPHYSPTSPHYSPTSPHY--SPTSPHYSPTSPHYSPT--SPHYSPTS-PHYSPTSPH 1751
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1752 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSP 1782
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/91 (51%), Positives = 54/91 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T H SP+Y SP + +SP +SP+S P YSP+SP
Sbjct: 1704 SPTSPHYSPTSPHYSPTSPHY--SPTSPHYSPTSPHYSPT--SPHYSPTS-PHYSPTSPH 1758
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1759 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSP 1789
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/91 (51%), Positives = 54/91 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T H SP+Y SP + +SP +SP+S P YSP+SP
Sbjct: 1711 SPTSPHYSPTSPHYSPTSPHY--SPTSPHYSPTSPHYSPT--SPHYSPTS-PHYSPTSPH 1765
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1766 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSP 1796
Score = 79.7 bits (195), Expect = 1e-13
Identities = 50/102 (49%), Positives = 58/102 (56%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
P D ++P SP S H SP+Y SP + +SP +SP+
Sbjct: 1668 PLNSDNKISNISPDLSPTSP---HYSPTSPHY--SPTSPHYSPTSPHYSPT--SPHYSPT 1720
Query: 400 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1721 S-PHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSP 1761
Score = 79.0 bits (193), Expect = 2e-13
Identities = 46/91 (50%), Positives = 54/91 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T H SP+Y SP + +SP +SP+S P YSP+SP
Sbjct: 1725 SPTSPHYSPTSPHYSPTSPHY--SPTSPHYSPTSPHYSPT--SPHYSPTS-PHYSPTSPH 1779
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+SP YSPTSP YSP
Sbjct: 1780 YSPTSPHYSPTSPHYSPSSPHYSPTSPQYSP 1810
Score = 78.2 bits (191), Expect = 3e-13
Identities = 45/91 (49%), Positives = 54/91 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T H SP+Y SP + +SP +SP+S P YSP+SP
Sbjct: 1732 SPTSPHYSPTSPHYSPTSPHY--SPTSPHYSPTSPHYSPT--SPHYSPTS-PHYSPTSPH 1786
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+SP YSPTSP YSPTSP Y+P
Sbjct: 1787 YSPTSPHYSPSSPHYSPTSPQYSPTSPNYNP 1817
Score = 77.0 bits (188), Expect = 7e-13
Identities = 43/76 (56%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSD--AQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGY 477
SP+ L+ + ++S +S + SP+ +SP+S P YSP+SP YSPTSP YSPTSP Y
Sbjct: 1664 SPSSPLNSDNKISNISPDLSPTSPH-----YSPTS-PHYSPTSPHYSPTSPHYSPTSPHY 1717
Query: 478 SPTSPGYSPTSPTYSP 525
SPTSP YSPTSP YSP
Sbjct: 1718 SPTSPHYSPTSPHYSP 1733
Score = 77.0 bits (188), Expect = 7e-13
Identities = 44/91 (48%), Positives = 53/91 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T H SP+Y SP + +SP +SP+S P YSP+SP
Sbjct: 1739 SPTSPHYSPTSPHYSPTSPHY--SPTSPHYSPTSPHYSPT--SPHYSPTS-PHYSPTSPH 1793
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSP YSPTSP Y+P SP YSP
Sbjct: 1794 YSPSSPHYSPTSPQYSPTSPNYNPASPNYSP 1824
Score = 73.2 bits (178), Expect = 1e-11
Identities = 47/104 (45%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T H SP+Y SP + +SP +SP+S P YSPSSP
Sbjct: 1746 SPTSPHYSPTSPHYSPTSPHY--SPTSPHYSPTSPHYSPT--SPHYSPTS-PHYSPSSPH 1800
Query: 433 YSPTSPGYSPTSPG-------------YSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP YSP
Sbjct: 1801 YSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPNYSP 1844
Score = 66.6 bits (161), Expect = 1e-09
Identities = 42/97 (43%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGM-AFSPSSSPG--YSPS 423
+P S T H SP+Y SP+ + Q+SP SP+ SP YSP+
Sbjct: 1774 SPTSPHYSPTSPHYSPTSPHY--SPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPT 1831
Query: 424 SPGYSPTSPGYSPTSPGY---SPTSPGYSPTSPTYSP 525
SP Y+PTSP YSP+SP Y + SPGYSP+SP Y P
Sbjct: 1832 SPNYNPTSPNYSPSSPNYISNNSGSPGYSPSSPQYDP 1868
Score = 55.5 bits (132), Expect = 2e-06
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T + SPNY SP SP S ++P +SP YSPSSP
Sbjct: 1802 SPTSPQYSPTSPNYNPASPNY--SPTSHYSPTSP-NYNP----------TSPNYSPSSPN 1848
Query: 433 Y---SPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
Y + SPGYSP+SP Y P + P SP+YS
Sbjct: 1849 YISNNSGSPGYSPSSPQYDPIAVASVPRSPSYS 1881
[182][TOP]
>UniRef100_Q5CH45 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium hominis
RepID=Q5CH45_CRYHO
Length = 1895
Score = 130 bits (326), Expect = 7e-29
Identities = 95/254 (37%), Positives = 120/254 (47%), Gaps = 79/254 (31%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D GPL +CSFEETV++L+DAA + ETD L GV+EN+MLGQLAP GT ++ +
Sbjct: 1452 RHGINRVDKGPLQKCSFEETVEVLMDAAMFGETDYLNGVSENVMLGQLAPYGTACFDVLI 1511
Query: 181 NDEMLKN-AIELQL-----------------PSYMDGLEFGMTPARSPVSG--------- 279
+ + L++ A L++ SY D F SP+S
Sbjct: 1512 DPDKLRDTATHLEIHGEFTKIGKFSTLSQTTRSYSDSGAFESDSFESPMSPLSPMSPLYQ 1571
Query: 280 -----TPYHEGMMSPNYL--------LSPNMRLSPMSDAQFSPYVGGMAFSP------SS 402
+P G SP + +SP SP+ + SP M ++P +S
Sbjct: 1572 SYEPMSPMISGQFSPVQMTPRSPMSPVSPGGIFSPVPYSPMSPSSPLMDYTPTSPIYAAS 1631
Query: 403 SP---------------------GYSPS------------SPGYSPTSPGYSPTSPGYSP 483
SP YSPS SP SPTSP YSPTSP YSP
Sbjct: 1632 SPTYNTEVSERARKKYKVNNTLSSYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSP 1691
Query: 484 TSPGYSPTSPTYSP 525
TSP YSPTSP YSP
Sbjct: 1692 TSPHYSPTSPHYSP 1705
Score = 80.9 bits (198), Expect = 5e-14
Identities = 47/92 (51%), Positives = 55/92 (59%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
++P S T H SP+Y SP + +SP +SP+S P YSP+SP
Sbjct: 1675 LSPTSPHYSPTSPHYSPTSPHY--SPTSPHYSPTSPHYSPT--SPHYSPTS-PHYSPTSP 1729
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1730 HYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSP 1761
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/91 (51%), Positives = 54/91 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T H SP+Y SP + +SP +SP+S P YSP+SP
Sbjct: 1690 SPTSPHYSPTSPHYSPTSPHY--SPTSPHYSPTSPHYSPT--SPHYSPTS-PHYSPTSPH 1744
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1745 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSP 1775
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/91 (51%), Positives = 54/91 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T H SP+Y SP + +SP +SP+S P YSP+SP
Sbjct: 1697 SPTSPHYSPTSPHYSPTSPHY--SPTSPHYSPTSPHYSPT--SPHYSPTS-PHYSPTSPH 1751
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1752 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSP 1782
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/91 (51%), Positives = 54/91 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T H SP+Y SP + +SP +SP+S P YSP+SP
Sbjct: 1704 SPTSPHYSPTSPHYSPTSPHY--SPTSPHYSPTSPHYSPT--SPHYSPTS-PHYSPTSPH 1758
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1759 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSP 1789
Score = 79.7 bits (195), Expect = 1e-13
Identities = 50/102 (49%), Positives = 58/102 (56%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS 399
P D ++P SP S H SP+Y SP + +SP +SP+
Sbjct: 1661 PLNSDNKISNISPDLSPTSP---HYSPTSPHY--SPTSPHYSPTSPHYSPT--SPHYSPT 1713
Query: 400 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1714 S-PHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSP 1754
Score = 79.0 bits (193), Expect = 2e-13
Identities = 46/91 (50%), Positives = 54/91 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T H SP+Y SP + +SP +SP+S P YSP+SP
Sbjct: 1718 SPTSPHYSPTSPHYSPTSPHY--SPTSPHYSPTSPHYSPT--SPHYSPTS-PHYSPTSPH 1772
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+SP YSPTSP YSP
Sbjct: 1773 YSPTSPHYSPTSPHYSPSSPHYSPTSPQYSP 1803
Score = 78.2 bits (191), Expect = 3e-13
Identities = 45/91 (49%), Positives = 54/91 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T H SP+Y SP + +SP +SP+S P YSP+SP
Sbjct: 1725 SPTSPHYSPTSPHYSPTSPHY--SPTSPHYSPTSPHYSPT--SPHYSPTS-PHYSPTSPH 1779
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+SP YSPTSP YSPTSP Y+P
Sbjct: 1780 YSPTSPHYSPSSPHYSPTSPQYSPTSPNYNP 1810
Score = 77.0 bits (188), Expect = 7e-13
Identities = 43/76 (56%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSD--AQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGY 477
SP+ L+ + ++S +S + SP+ +SP+S P YSP+SP YSPTSP YSPTSP Y
Sbjct: 1657 SPSSPLNSDNKISNISPDLSPTSPH-----YSPTS-PHYSPTSPHYSPTSPHYSPTSPHY 1710
Query: 478 SPTSPGYSPTSPTYSP 525
SPTSP YSPTSP YSP
Sbjct: 1711 SPTSPHYSPTSPHYSP 1726
Score = 77.0 bits (188), Expect = 7e-13
Identities = 44/91 (48%), Positives = 53/91 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T H SP+Y SP + +SP +SP+S P YSP+SP
Sbjct: 1732 SPTSPHYSPTSPHYSPTSPHY--SPTSPHYSPTSPHYSPT--SPHYSPTS-PHYSPTSPH 1786
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSPTSP YSPTSP Y+P SP YSP
Sbjct: 1787 YSPSSPHYSPTSPQYSPTSPNYNPASPNYSP 1817
Score = 73.2 bits (178), Expect = 1e-11
Identities = 47/104 (45%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T H SP+Y SP + +SP +SP+S P YSPSSP
Sbjct: 1739 SPTSPHYSPTSPHYSPTSPHY--SPTSPHYSPTSPHYSPT--SPHYSPTS-PHYSPSSPH 1793
Query: 433 YSPTSPGYSPTSPG-------------YSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP YSP
Sbjct: 1794 YSPTSPQYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPNYSP 1837
Score = 66.6 bits (161), Expect = 1e-09
Identities = 42/97 (43%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGM-AFSPSSSPG--YSPS 423
+P S T H SP+Y SP+ + Q+SP SP+ SP YSP+
Sbjct: 1767 SPTSPHYSPTSPHYSPTSPHY--SPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSPT 1824
Query: 424 SPGYSPTSPGYSPTSPGY---SPTSPGYSPTSPTYSP 525
SP Y+PTSP YSP+SP Y + SPGYSP+SP Y P
Sbjct: 1825 SPNYNPTSPNYSPSSPNYISNNSGSPGYSPSSPQYDP 1861
Score = 54.7 bits (130), Expect = 4e-06
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T + SPNY SP SP S ++P +SP YSPSSP
Sbjct: 1795 SPTSPQYSPTSPNYNPASPNY--SPTSHYSPTSP-NYNP----------TSPNYSPSSPN 1841
Query: 433 Y---SPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
Y + SPGYSP+SP Y P + P SP+YS
Sbjct: 1842 YISNNSGSPGYSPSSPQYDPIAVTSVPRSPSYS 1874
[183][TOP]
>UniRef100_Q4N0F9 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4N0F9_THEPA
Length = 1681
Score = 130 bits (326), Expect = 7e-29
Identities = 94/243 (38%), Positives = 117/243 (48%), Gaps = 68/243 (27%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D GPL++CSFEET++ LL AA + E D L+GVTEN+++GQL+P GTG ++ +
Sbjct: 1400 RHGINRADRGPLIKCSFEETLETLLTAAVFGEVDHLKGVTENVIVGQLSPYGTGAFDIMI 1459
Query: 181 NDEMLKNAIELQLPSYMDGLEF---------GMTPA------------------RSPVSG 279
++ L++A + + D L TPA SPV G
Sbjct: 1460 DEVKLRDANQTNAINVADTLGLVSPDSSPLSPSTPATKQTMSPMAFSPTYTSLMMSPVGG 1519
Query: 280 T---PYHEGMMSPNYLL----SPNMRLSPMS-------DAQFSPYVGGMAFSPSSSPGYS 417
P G+M Y L SP SPMS + SP A SP SP YS
Sbjct: 1520 IGMGPSTPGLMVDTYALGGSFSPTSPTSPMSPTSPMSPTSPMSPMSPTSAMSPVYSPAYS 1579
Query: 418 PSSP--------GYSPTSPGYSPT-----------------SPGYSPTSP--GYSPTSPT 516
P+SP SPTSP YSP SP YSPTSP GY+PTSP
Sbjct: 1580 PTSPMSPTSPANALSPTSPVYSPAYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPTSPV 1639
Query: 517 YSP 525
YSP
Sbjct: 1640 YSP 1642
Score = 62.4 bits (150), Expect = 2e-08
Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS---SPGYSPS 423
+PA + +P + SP S SP+ +SP + ++P+S SP YSP+
Sbjct: 1588 SPANALSPTSPVYSPAYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPTSPVYSPAYSPT 1647
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP Y GYSPTSP SPTSP YSPT P +SP
Sbjct: 1648 SPNY-----GYSPTSP-LSPTSPAYSPTDP-FSP 1674
[184][TOP]
>UniRef100_Q84KP6 DNA-directed RNA polymerase n=1 Tax=Cyanidioschyzon merolae
RepID=Q84KP6_CYAME
Length = 1819
Score = 128 bits (322), Expect = 2e-28
Identities = 99/259 (38%), Positives = 117/259 (45%), Gaps = 84/259 (32%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
R GINR +TGPLMRC+FEETV+IL AA + D GV++ ++LGQ A +GTG L L
Sbjct: 1436 RFGINRLETGPLMRCTFEETVEILATAATFGVRDACEGVSQAVILGQRAKVGTGAFSLTL 1495
Query: 181 NDEMLKNA-IELQLPSYMDGLEFGM---------------TPARSPVSGTPYHEGMMSPN 312
++ +L A E + + D G+ TPA +P TP GM S
Sbjct: 1496 DESVLNQAETETSVAAVRDAHVGGVFAKAYAAADVDADHWTPAYTP-GATP---GMASDG 1551
Query: 313 Y---------LLSPNMRLSPMSDAQFSP----YVGG------------------------ 381
+ L SP SP FSP YVGG
Sbjct: 1552 FAAPWTPSLNLASPYGSFSPA--VGFSPATSTYVGGDAMKDAGRYGLGGTSPFASFSASA 1609
Query: 382 -----------------MAFSPSS--------------SPGYSPSSPGYSPTSPGYSPTS 468
AFSPSS SP YSP+SP YSPTSP YSPTS
Sbjct: 1610 TTPNWAPSPAGGGTGTLGAFSPSSPAYSPTSPRLVSPTSPAYSPTSPAYSPTSPAYSPTS 1669
Query: 469 PGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSP
Sbjct: 1670 PAYSPTSPAYSPTSPAYSP 1688
Score = 86.3 bits (212), Expect = 1e-15
Identities = 51/89 (57%), Positives = 55/89 (61%)
Frame = +1
Query: 259 ARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYS 438
A SP G G SP+ SP SP S SP A+SP+S P YSP+SP YS
Sbjct: 1615 APSPAGGGTGTLGAFSPS---SP--AYSPTSPRLVSPT--SPAYSPTS-PAYSPTSPAYS 1666
Query: 439 PTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
PTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1667 PTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1695
Score = 69.7 bits (169), Expect = 1e-10
Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 7/75 (9%)
Frame = +1
Query: 322 SPNMRLSPMS-DAQFSPYVGGMAFSPSS-SPGYSPSSP-GYSPTSPG--YSPTSPG--YS 480
SPN+ SP S + +SP +A+SPSS + YSPSSP YSP+SP YSP+SP YS
Sbjct: 1742 SPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSSPNVAYSPSSPNVAYS 1801
Query: 481 PTSPGYSPTSPTYSP 525
P+SP +SP+SP YSP
Sbjct: 1802 PSSPAFSPSSPVYSP 1816
Score = 66.6 bits (161), Expect = 1e-09
Identities = 47/97 (48%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S P SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 1633 SPAYSPTS--PRLVSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 1685
Query: 433 YSPTSPGYSPTSP--GYSPTSP--GYSPTSP--TYSP 525
YSPTSP YSP+SP YSP+SP YSP+SP YSP
Sbjct: 1686 YSPTSPAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSP 1722
Score = 62.8 bits (151), Expect = 1e-08
Identities = 50/105 (47%), Positives = 62/105 (59%), Gaps = 14/105 (13%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSP---NMRLSPMS-DAQFSPYVGGMAFSPSS-SPGYS 417
+PA SP S + SPN SP N+ SP S + +SP +A+SPSS + YS
Sbjct: 1690 SPAYSPSSPNVAYSPS-SPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYS 1748
Query: 418 PSSPG--YSPTSP--GYSPTSP--GYSPTSP-GYSPTSP--TYSP 525
PSSP YSP+SP YSP+SP YSP+SP YSP+SP YSP
Sbjct: 1749 PSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSSPNVAYSP 1793
Score = 57.0 bits (136), Expect = 8e-07
Identities = 46/102 (45%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS-SPGYSPSSP 429
+PA SP S SP Y SP + +SP +A+SPSS + YSPSSP
Sbjct: 1662 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPSSPNVAYSPSSPNVAYSPSSP 1716
Query: 430 G--YSPTSP--GYSPTSP--GYSPTSP--GYSPTSP--TYSP 525
YSP+SP YSP+SP YSP+SP YSP+SP YSP
Sbjct: 1717 NVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSP 1758
[185][TOP]
>UniRef100_B6AG69 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AG69_9CRYT
Length = 1927
Score = 128 bits (321), Expect = 3e-28
Identities = 91/256 (35%), Positives = 121/256 (47%), Gaps = 81/256 (31%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR D GPL +CSFEETV+IL+DAA + ETD L GV+EN+M+GQL+P GT +L +
Sbjct: 1460 RHGMNRVDRGPLQKCSFEETVEILMDAAMFGETDYLNGVSENVMVGQLSPYGTACFDLLV 1519
Query: 181 NDEMLKNA---IELQLPSYMDGLEFGMTPARSPVSGT--PYHEGM----MSPNYLLSP-- 327
+ + L++ +++ S G ++ A + V T Y+ G MSP +SP
Sbjct: 1520 DSDKLRDTATHLDIHGNSQKSGFISDISQASTGVFSTNKGYNSGTFDSPMSPLSPMSPLY 1579
Query: 328 --NMRLSPMSDAQFSP----------------YVGGMAFSPSS----------------- 402
+ +SPM QFSP + M +SP+S
Sbjct: 1580 STHEPMSPMISGQFSPVQMTPRSPMSPVSPSGILSPMPYSPASPTSPLIDYTPTSPIYAV 1639
Query: 403 ----------------------SPGYSPSSPGY-------------SPTSPGYSPTSPGY 477
+ YSP+SP Y SPTSPG P SP Y
Sbjct: 1640 RSPAYGHETEERTKKRYKANIATSAYSPTSPVYSGDKDGDSSSPFMSPTSPGVEPLSPNY 1699
Query: 478 SPTSPGYSPTSPTYSP 525
SPTSP YSPTSP YSP
Sbjct: 1700 SPTSPNYSPTSPNYSP 1715
Score = 85.1 bits (209), Expect = 3e-15
Identities = 50/103 (48%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Frame = +1
Query: 226 YMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMA--FSP 396
+M G+ P S T + SPNY SPN + + SP+ + +SP
Sbjct: 1684 FMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSP 1743
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1744 TS-PHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSP 1785
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/91 (51%), Positives = 54/91 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T H SP+Y SP + +SP +SP+S P YSP+SP
Sbjct: 1714 SPTSPNYSPTSPHYSPTSPHY--SPTSPHYSPTSPHYSPTSPN--YSPTS-PHYSPTSPN 1768
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1769 YSPTSPHYSPTSPNYSPTSPHYSPTSPNYSP 1799
Score = 81.3 bits (199), Expect = 4e-14
Identities = 46/92 (50%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P S T H SP+Y SP+ + + + SP+ +SP+S P YSP+SP
Sbjct: 1721 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPH-----YSPTS-PNYSPTSP 1774
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP YSP
Sbjct: 1775 HYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSP 1806
Score = 80.9 bits (198), Expect = 5e-14
Identities = 49/92 (53%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P S T H SP+Y SPN SP S +SP +SP+S P YSP+SP
Sbjct: 1728 SPTSPHYSPTSPHYSPTSPHYSPTSPNY--SPTSP-HYSPTSPN--YSPTS-PHYSPTSP 1781
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+SP YSPTSP+Y+P
Sbjct: 1782 NYSPTSPHYSPTSPNYSPSSPHYSPTSPSYNP 1813
Score = 80.9 bits (198), Expect = 5e-14
Identities = 45/92 (48%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P S T H SPNY SP+ + + + SP+ +SP+S P YSP+SP
Sbjct: 1735 SPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPH-----YSPTS-PNYSPTSP 1788
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+SP YSPTSP Y+P SP YSP
Sbjct: 1789 HYSPTSPNYSPSSPHYSPTSPSYNPASPNYSP 1820
Score = 79.0 bits (193), Expect = 2e-13
Identities = 44/92 (47%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P S T H SPNY SP+ + + + SP+ +SP+S P YSPSSP
Sbjct: 1749 SPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPH-----YSPTS-PNYSPSSP 1802
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP Y+P SP YSP+SP Y+P SP YSP
Sbjct: 1803 HYSPTSPSYNPASPNYSPSSPHYNPASPNYSP 1834
Score = 77.4 bits (189), Expect = 6e-13
Identities = 45/88 (51%), Positives = 47/88 (53%)
Frame = +1
Query: 262 RSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSP 441
RSP G HE N+ S S SP G SSSP SP+SPG P
Sbjct: 1640 RSPAYG---HETEERTKKRYKANIATSAYSPT--SPVYSGDKDGDSSSPFMSPTSPGVEP 1694
Query: 442 TSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1695 LSPNYSPTSPNYSPTSPNYSPTSPNYSP 1722
Score = 74.7 bits (182), Expect = 4e-12
Identities = 41/91 (45%), Positives = 53/91 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T H SPNY SP+ + ++P +SPSS P Y+P+SP
Sbjct: 1777 SPTSPNYSPTSPHYSPTSPNY--SPSSPHYSPTSPSYNP--ASPNYSPSS-PHYNPASPN 1831
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP Y+P P YSP+SP Y+PTSP YSP
Sbjct: 1832 YSPSSPQYNPALPNYSPSSPQYNPTSPNYSP 1862
Score = 56.2 bits (134), Expect = 1e-06
Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Frame = +1
Query: 256 PARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGY 435
PA S + H SPNY SP S Q++P + +SPSS P Y+P+SP Y
Sbjct: 1813 PASPNYSPSSPHYNPASPNY--------SP-SSPQYNPALPN--YSPSS-PQYNPTSPNY 1860
Query: 436 SPTSPGY------------SPTSPGYSPTSPGYSPTSPTYS 522
SP+SP Y SP+SP Y + Y PTSP+Y+
Sbjct: 1861 SPSSPNYVLSNGNIDSPQYSPSSPHYDQSVAAYHPTSPSYT 1901
[186][TOP]
>UniRef100_Q010D7 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
RepID=Q010D7_OSTTA
Length = 1673
Score = 125 bits (313), Expect = 2e-27
Identities = 83/180 (46%), Positives = 102/180 (56%), Gaps = 12/180 (6%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR +TG LMRCSFEETVDIL++AAA++E D + G +ENIMLGQ PIGTG+ +L+L
Sbjct: 1402 RHGINRAETGALMRCSFEETVDILMEAAAFSERDNMTGPSENIMLGQFCPIGTGEFKLHL 1461
Query: 181 NDEMLKNAIELQL--PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSP-NMRLSPMS 351
+ EML +A+EL L + G MTP R GTP + G SP++LLSP +SP
Sbjct: 1462 DQEMLLDAVELDLFETARTPGHYGSMTPGR---EGTPGY-GAKSPSFLLSPGGAMMSPFD 1517
Query: 352 DAQ-FSPYV-GGMAFSPSSSPGYSPSSPG-------YSPTSPGYSPTSPGYSPTSPGYSP 504
+ FSPY GGMA S P G P G P G P G P
Sbjct: 1518 TSMAFSPYSDGGMARLLSDESSILPDLAGVLSDLSCVLPDESGILPDESGILPDESGILP 1577
[187][TOP]
>UniRef100_O04142 DNA-directed RNA polymerase (Fragment) n=1 Tax=Porphyra yezoensis
RepID=O04142_PORYE
Length = 1685
Score = 124 bits (312), Expect = 3e-27
Identities = 90/244 (36%), Positives = 111/244 (45%), Gaps = 69/244 (28%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR + LM+CSFEET DILLDAA + ETD L GV+E+IMLGQLAP+GTG L+L
Sbjct: 1368 RHGINRVSSSALMKCSFEETSDILLDAAMHGETDTLTGVSESIMLGQLAPLGTGSFGLFL 1427
Query: 181 NDEMLKNAIELQLPS----------YMDGLEFGMTPARSPVSGTP--YHEGMMSPNYLLS 324
ND L +A+E + + M E G TP R TP + M+P Y S
Sbjct: 1428 NDAALTDAVEPETDAAASARIARSPAMPESERGYTPGREG-QRTPGRAFDAAMTPTYAYS 1486
Query: 325 PNMRLSPMSDAQFSPYVGGMAFSP------------------------------------ 396
P +P A Y G FSP
Sbjct: 1487 PARARTPGGTAFSPAYTGPGGFSPINATASFSPIMSSADAAGRATPGRMTPGRSPAGRFT 1546
Query: 397 ----SSSPGYSPSSP---------------GYSPTSPGYSPTSP--GYSPTSPGYSPTSP 513
+SPGY+ SP Y+P SP Y TSP GYSP++P + +SP
Sbjct: 1547 PRMSPASPGYAAMSPRFGGGLCGGPAGGAGAYAPASPAYMATSPGMGYSPSTPALAVSSP 1606
Query: 514 TYSP 525
YSP
Sbjct: 1607 GYSP 1610
Score = 60.5 bits (145), Expect = 7e-08
Identities = 53/136 (38%), Positives = 58/136 (42%), Gaps = 44/136 (32%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYL-LSPNM-------------RLSPMSDAQFSPYVGGMA 387
MTP RSP SP Y +SP +P S A + G M
Sbjct: 1535 MTPGRSPAGRFTPRMSPASPGYAAMSPRFGGGLCGGPAGGAGAYAPASPAYMATSPG-MG 1593
Query: 388 FSPS------SSPGYSPSSPGYSPTSP----------GY-SPTSPGYSPTSPG------- 495
+SPS SSPGYSP GYSPTSP GY SP SPGY PTSP
Sbjct: 1594 YSPSTPALAVSSPGYSP---GYSPTSPSVGARGGPAAGYASPQSPGYVPTSPAYARPGTV 1650
Query: 496 ------YSPTSPTYSP 525
YSP+SP YSP
Sbjct: 1651 VAAANVYSPSSPAYSP 1666
Score = 54.3 bits (129), Expect = 5e-06
Identities = 41/103 (39%), Positives = 48/103 (46%), Gaps = 29/103 (28%)
Frame = +1
Query: 304 SPNYLL-SPNMRLSPMSDAQFSPYVGGMAFSPSSSP-------------GY-SPSSPGYS 438
SP Y+ SP M SP + A V +SP SP GY SP SPGY
Sbjct: 1582 SPAYMATSPGMGYSPSTPALA---VSSPGYSPGYSPTSPSVGARGGPAAGYASPQSPGYV 1638
Query: 439 PTSPGY-------------SPTSPGYSPTSPGY-SPTSPTYSP 525
PTSP Y SP+SP YSP+SP Y + +SP Y P
Sbjct: 1639 PTSPAYARPGTVVAAANVYSPSSPAYSPSSPNYAAASSPAYQP 1681
[188][TOP]
>UniRef100_Q9AXN1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Botryocladia
uvarioides RepID=Q9AXN1_9FLOR
Length = 1712
Score = 120 bits (302), Expect = 4e-26
Identities = 95/274 (34%), Positives = 123/274 (44%), Gaps = 100/274 (36%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTGPLM+CSFEET DILL+AA + D L+GV+ENI+LGQLAP+GTG ++ L
Sbjct: 1347 RHGINRVDTGPLMKCSFEETTDILLEAATFGMRDNLQGVSENIVLGQLAPVGTGSFKMML 1406
Query: 181 NDEMLKNAIELQLPSYMDGLEFGM------------TPARS--------PVSG--TP--- 285
N++ML+ AIE + P+ D + M +PAR P+ G TP
Sbjct: 1407 NEKMLQQAIETE-PAQQDAADGAMDQSGTNSFDMAWSPARGDATPGLHRPMDGRTTPGLR 1465
Query: 286 -YHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS--------------------- 399
+ M +P+ + S S + QFSP +FSPS
Sbjct: 1466 TGYTPMWAPSRMGSTRGGPSAFNVQQFSPSADEASFSPSPATPGNFGQNANAYTPLQSPR 1525
Query: 400 ----------------------------SSPGYSPSSP-------GYSPTSPGYSPTSPG 474
+SP Y P SP G++P SP Y TSP
Sbjct: 1526 GDYMPPMSPGGAASPYVSASPGRASPYATSPAY-PQSPGSYNAGSGFAPASPAYKVTSPA 1584
Query: 475 ------------------YSPTSPGYSPTSPTYS 522
YSPTSP ++PTSP YS
Sbjct: 1585 PGGYGGAYQSPARSPGAQYSPTSPAFTPTSPGYS 1618
Score = 56.6 bits (135), Expect = 1e-06
Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Frame = +1
Query: 265 SPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYV----------GGMAFSPSSSPG- 411
SP +PY SP Y SP + A SP GG SP+ SPG
Sbjct: 1545 SPGRASPY---ATSPAYPQSPGSYNAGSGFAPASPAYKVTSPAPGGYGGAYQSPARSPGA 1601
Query: 412 -YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
YSP+SP ++PTSPGYS + P + YSPT P+Y+
Sbjct: 1602 QYSPTSPAFTPTSPGYSSATGPGRPGTGAYSPTGPSYN 1639
[189][TOP]
>UniRef100_B9PMD7 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii
RepID=B9PMD7_TOXGO
Length = 1892
Score = 119 bits (298), Expect = 1e-25
Identities = 101/282 (35%), Positives = 124/282 (43%), Gaps = 107/282 (37%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D GPLM+CSFEETV+IL++AA +AE D LRGVTENIM+GQL P+GTG ++ +
Sbjct: 1423 RHGINRIDKGPLMKCSFEETVEILMEAAVFAEADHLRGVTENIMMGQLCPLGTGYFDVLI 1482
Query: 181 NDEMLKNAIELQLPSYMDGL----EFGMTPARSPVSG-------------TPYHEGMMSP 309
++E LK+A +DGL EF SP S +P+ + SP
Sbjct: 1483 DEEKLKDA-----SHNLDGLGGAGEFDGGVGTSPTSSDPLVITPDGSFTPSPHLNSVFSP 1537
Query: 310 --------NYLLSPNMRLSPMS-------DAQ-------------------------FSP 369
++ SP LSP + D Q FSP
Sbjct: 1538 MPFSTVYSSFAASPANPLSPTTLGTNAGVDTQQLGGKFSPTQQTPRSPTSPLSPLSCFSP 1597
Query: 370 YVGGMAFSPSSSPG--YSP-----------SSPGYSPTSP-------------------- 450
SPS PG +SP SSP YSP+SP
Sbjct: 1598 RNPLSPLSPSGPPGGVFSPTSPILGSALETSSPSYSPSSPQSAYFQNDGSSSAVDMVISP 1657
Query: 451 ------------GYSPT----SPGYSPTS-PGYSPTSPTYSP 525
YSPT SP YSP+S P YSPTSP YSP
Sbjct: 1658 GGVGSDGRGRGGSYSPTSPTLSPSYSPSSPPSYSPTSPAYSP 1699
Score = 63.2 bits (152), Expect = 1e-08
Identities = 50/115 (43%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGG------MAFSPSSSP- 408
++P+ SP S Y SP Y SP LS S P VGG FSPS++P
Sbjct: 1678 LSPSYSPSSPPSYSP--TSPAY--SPTSALSIASPV---PGVGGDGRTPLSPFSPSNNPM 1730
Query: 409 --------GYSPSSPGY--------SPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP SP SP YSPTSP YSPTSP YSPT YSP
Sbjct: 1731 SPHFSASTSYSPTSPVQQSNPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSP 1785
Score = 62.4 bits (150), Expect = 2e-08
Identities = 40/86 (46%), Positives = 48/86 (55%)
Frame = +1
Query: 262 RSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSP 441
R+P+S MSP++ S + SP S Q S +P+S SP SP YSP
Sbjct: 1717 RTPLSPFSPSNNPMSPHF--SASTSYSPTSPVQQS--------NPTSPT--SPYSPAYSP 1764
Query: 442 TSPGYSPTSPGYSPTSPGYSPTSPTY 519
TSP YSPTSP YSPT YSP SP+Y
Sbjct: 1765 TSPRYSPTSPMYSPTFAPYSPQSPSY 1790
[190][TOP]
>UniRef100_B6KEC6 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
RepID=B6KEC6_TOXGO
Length = 1892
Score = 118 bits (295), Expect = 3e-25
Identities = 87/218 (39%), Positives = 115/218 (52%), Gaps = 43/218 (19%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D GPLM+CSFEETV+IL++AA +AE D LRGVTENIM+GQL P+GTG ++ +
Sbjct: 1423 RHGINRIDKGPLMKCSFEETVEILMEAAVFAEADHLRGVTENIMMGQLCPLGTGYFDVLI 1482
Query: 181 NDEMLKNAIELQLPSYMDGL----EFGMTPARSPVSG-------------TPYHEGMMSP 309
++E LK+A +DGL EF SP S +P+ + SP
Sbjct: 1483 DEEKLKDA-----SHNLDGLGGAGEFDGGVGTSPTSSDPLVITPDGSFTPSPHLNSVFSP 1537
Query: 310 --------NYLLSPNMRLSPM---SDAQFSPYVGGMAFSPSSSPGYSPSSP-----GYSP 441
++ SP LSP ++A G FSP+ SP+SP +SP
Sbjct: 1538 MPFSTVYSSFAASPANPLSPTTLGTNAGVDTQQLGGKFSPTQQTPRSPTSPLSPLSCFSP 1597
Query: 442 TSPGYSPTSPG------YSPTSP----GYSPTSPTYSP 525
+P SP SP +SPTSP +SP+YSP
Sbjct: 1598 RNP-LSPLSPSGPPGGVFSPTSPILGSALETSSPSYSP 1634
Score = 62.4 bits (150), Expect = 2e-08
Identities = 40/86 (46%), Positives = 48/86 (55%)
Frame = +1
Query: 262 RSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSP 441
R+P+S MSP++ S + SP S Q S +P+S SP SP YSP
Sbjct: 1717 RTPLSPFSPSNNPMSPHF--SASTSYSPTSPVQQS--------NPTSPT--SPYSPAYSP 1764
Query: 442 TSPGYSPTSPGYSPTSPGYSPTSPTY 519
TSP YSPTSP YSPT YSP SP+Y
Sbjct: 1765 TSPRYSPTSPMYSPTFAPYSPQSPSY 1790
Score = 62.0 bits (149), Expect = 2e-08
Identities = 49/115 (42%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGG------MAFSPSSSP- 408
++P+ SP + Y SP Y SP LS S P VGG FSPS++P
Sbjct: 1678 LSPSYSPSAPPSYSP--TSPAY--SPTSALSIASPV---PGVGGDGRTPLSPFSPSNNPM 1730
Query: 409 --------GYSPSSPGY--------SPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP SP SP YSPTSP YSPTSP YSPT YSP
Sbjct: 1731 SPHFSASTSYSPTSPVQQSNPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSP 1785
[191][TOP]
>UniRef100_Q9BMP2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stylonychia mytilus
RepID=Q9BMP2_STYMT
Length = 1678
Score = 113 bits (282), Expect = 9e-24
Identities = 85/245 (34%), Positives = 120/245 (48%), Gaps = 70/245 (28%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D+ PL +CSFEETV+ILL+AA +AETD L+G+TENI++GQLAP GTG E+ +
Sbjct: 1300 RHGINRVDSSPLRKCSFEETVEILLEAAVFAETDPLKGITENIIMGQLAPFGTGCFEITI 1359
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSG--------------------------- 279
+ ++L+ +++ P D + G TP + +S
Sbjct: 1360 DPQVLQENAQIK-PEEEDYIG-GFTPIQDEMSNGNGLEMYGINTPLVMNTPHNDYGGAST 1417
Query: 280 ----TPYHEGMMSPN--------------------YLLSPNMRL--SPMSDAQFSPYVGG 381
TP ++G SP+ ++ SPN R SP+ +A SP
Sbjct: 1418 HSMWTPGNQGSFSPSPGVYSPGYAQSPGYMSPGQQFMGSPNYRAVQSPIYNAIQSPIYHA 1477
Query: 382 MAFSPSSSPGYSPSSPGYSPTSPG-------YSPTSPGY-----SPTSPGYSPT-----S 510
P SP + +SP YSPT+ Y+ SPGY + +SP YS T S
Sbjct: 1478 TEGGPGRSPTGNQASPIYSPTTQNNRMSPSYYNSVSPGYYRTPGASSSPVYSQTLGSHQS 1537
Query: 511 PTYSP 525
P+YSP
Sbjct: 1538 PSYSP 1542
[192][TOP]
>UniRef100_B8BQ02 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BQ02_THAPS
Length = 1627
Score = 112 bits (279), Expect = 2e-23
Identities = 76/202 (37%), Positives = 101/202 (50%), Gaps = 38/202 (18%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR ++GPL+RCSFEETVD+L DAA +AE + LRGVTENIM+GQLA +GTGD +L L
Sbjct: 1420 RHGINRVESGPLLRCSFEETVDMLNDAACFAEEEVLRGVTENIMMGQLARVGTGDMDLLL 1479
Query: 181 NDEMLKNAIELQ-----------------LPSYM-------------DGLEFGMTPARSP 270
+++ + ++L+ LP + L G +P
Sbjct: 1480 DEQKVLLWMDLRQTRNWGSWAALVCQHRMLPLHSRLLKCLHLLMLVDSVLRLGDSPLVHT 1539
Query: 271 VSGTPYHEGMMSPNYLLSP------NMRLSPMSDAQFSPYVGGMAFS--PSSSPGYSPSS 426
+ ++ P + LS +R + FS F+ P P Y
Sbjct: 1540 ATSGKLNDSWYIPRHALSSFFVSNLLLRCPSLQTGIFSNSNKSCIFTNKPCLQP-YVTCV 1598
Query: 427 PGYSPTSPGYSPTSPGYSPTSP 492
Y PTSP YSPTSP YSPTSP
Sbjct: 1599 QSYDPTSPAYSPTSPAYSPTSP 1620
[193][TOP]
>UniRef100_Q4XE57 Putative uncharacterized protein (Fragment) n=1 Tax=Plasmodium
chabaudi RepID=Q4XE57_PLACH
Length = 871
Score = 112 bits (279), Expect = 2e-23
Identities = 81/202 (40%), Positives = 109/202 (53%), Gaps = 31/202 (15%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D GPL++CSFEETV+ILL+AAA+A+ D LRG+TENIMLGQL IGTG ++ +
Sbjct: 578 RHGINRVDKGPLIKCSFEETVEILLEAAAFAQVDNLRGITENIMLGQLCRIGTGVFDIII 637
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQ 360
+++ L +A + L + D G T S SG+ ++G+++P+ L SP + S
Sbjct: 638 DNQKLNDANQ-NLETIQDITSAGFTTPDS--SGSNNNQGIITPDGLQSPLGINTISSPLP 694
Query: 361 FSPYVGGMAFSPS-------------SSPGYSPS--SPG----------------YSPTS 447
FSP SP+ P YS + SP +SPT
Sbjct: 695 FSPTYNSNLLSPTLPIDNMNNILSPQCLPNYSDNIMSPSKNNDFNNLDTLQLGGKFSPTQ 754
Query: 448 PGYSPTSPGYSPTSPGYSPTSP 513
SP SP SPTS +SP SP
Sbjct: 755 SPRSPLSP-TSPTSVIHSPFSP 775
[194][TOP]
>UniRef100_O77375 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=O77375_PLAF7
Length = 2457
Score = 110 bits (276), Expect = 5e-23
Identities = 78/195 (40%), Positives = 105/195 (53%), Gaps = 24/195 (12%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D GPL++CSFEETV+ILL+AAA+A+ D LRG+TENIMLGQL IGTG ++ +
Sbjct: 1994 RHGINRVDKGPLIKCSFEETVEILLEAAAFAQVDNLRGITENIMLGQLCKIGTGSFDIII 2053
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQ 360
+++ L +A + L + D G T TP +++P+ L SP + S
Sbjct: 2054 DNQKLNDANQ-NLETIQDLTSAGFT--------TPDSLHVITPDGLQSPVAINTINSPLP 2104
Query: 361 FSPYVGGMAFSPSS---------SPGYSPSSPG---YSPTSPG------------YSPTS 468
FSP SP++ SP Y+ + G SPTS +SPT
Sbjct: 2105 FSPTYNANLLSPTAPIDNVNNLLSPQYNLQNYGDNVMSPTSKDINNLDTLKLGGKFSPTQ 2164
Query: 469 PGYSPTSPGYSPTSP 513
SPTS +SP SP
Sbjct: 2165 SPKSPTSVMHSPFSP 2179
Score = 79.3 bits (194), Expect = 1e-13
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = +1
Query: 298 MMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGY 477
+MSP Y ++ + + SP S ++SP +SP+S P YSP+SP YSPTSP YSPTSP Y
Sbjct: 2283 VMSPVYSVT-SPKYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPTSPKY 2337
Query: 478 SPTSPGYSPTSPTYSP 525
SPTSP YSPTSP YSP
Sbjct: 2338 SPTSPKYSPTSPKYSP 2353
Score = 77.0 bits (188), Expect = 7e-13
Identities = 48/95 (50%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSGT-PYHEGMMSPNYLLSPNMRLSPMSDAQ-FSPY--VGGMAFSPSSSPGYSP 420
+P+ SP S T + SP + N +++ S SP V +SP+S P YSP
Sbjct: 2246 SPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTS-PKYSP 2304
Query: 421 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 2305 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 2339
Score = 64.3 bits (155), Expect = 5e-09
Identities = 39/75 (52%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSP 483
SP Y SP + ++SP +SP+S P YSP+SP YSPTSP YSPTSP YSP
Sbjct: 2299 SPKY--SPTSPKYSPTSPKYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPTSPKYSP 2353
Query: 484 TSP-GYSPTSPTYSP 525
TSP + SP YSP
Sbjct: 2354 TSPVAQNIASPNYSP 2368
Score = 56.6 bits (135), Expect = 1e-06
Identities = 38/90 (42%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSP---- 471
SP Y SP + ++SP +SP+S P YSP+SP YSPTSP YSPTSP
Sbjct: 2306 SPKY--SPTSPKYSPTSPKYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPTSPVAQN 2360
Query: 472 --------------GYSPTSPGYSPTSPTY 519
+SPTSP YS +SP Y
Sbjct: 2361 IASPNYSPYSITSPKFSPTSPAYSISSPVY 2390
[195][TOP]
>UniRef100_P14248 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Plasmodium
falciparum CDC/Honduras RepID=RPB1_PLAFD
Length = 2452
Score = 110 bits (276), Expect = 5e-23
Identities = 78/195 (40%), Positives = 105/195 (53%), Gaps = 24/195 (12%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D GPL++CSFEETV+ILL+AAA+A+ D LRG+TENIMLGQL IGTG ++ +
Sbjct: 1996 RHGINRVDKGPLIKCSFEETVEILLEAAAFAQVDNLRGITENIMLGQLCKIGTGSFDIII 2055
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQ 360
+++ L +A + L + D G T TP +++P+ L SP + S
Sbjct: 2056 DNQKLNDANQ-NLETIQDLTSAGFT--------TPDSLHVITPDGLQSPVAINTINSPLP 2106
Query: 361 FSPYVGGMAFSPSS---------SPGYSPSSPG---YSPTSPG------------YSPTS 468
FSP SP++ SP Y+ + G SPTS +SPT
Sbjct: 2107 FSPTYNANLLSPTAPIDNVNNLLSPQYNLQNYGDNVMSPTSKDINNLDTLKLGGKFSPTQ 2166
Query: 469 PGYSPTSPGYSPTSP 513
SPTS +SP SP
Sbjct: 2167 SPKSPTSVMHSPFSP 2181
Score = 77.4 bits (189), Expect = 6e-13
Identities = 43/76 (56%), Positives = 52/76 (68%)
Frame = +1
Query: 298 MMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGY 477
+MSP Y ++ + + SP S ++SP +SP YSP+SP YSPTSP YSPTSP Y
Sbjct: 2285 VMSPVYSVT-SPKYSPTSP-KYSP----------TSPKYSPTSPKYSPTSPKYSPTSPKY 2332
Query: 478 SPTSPGYSPTSPTYSP 525
SPTSP YSPTSP YSP
Sbjct: 2333 SPTSPKYSPTSPKYSP 2348
Score = 77.0 bits (188), Expect = 7e-13
Identities = 48/95 (50%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Frame = +1
Query: 253 TPARSPVSGT-PYHEGMMSPNYLLSPNMRLSPMSDAQ-FSPY--VGGMAFSPSSSPGYSP 420
+P+ SP S T + SP + N +++ S SP V +SP+S P YSP
Sbjct: 2248 SPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTS-PKYSP 2306
Query: 421 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 2307 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 2341
Score = 62.0 bits (149), Expect = 2e-08
Identities = 41/84 (48%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPT------ 465
SP Y SP + ++SP +SP+S P YSP+SP YSPTSP YSPT
Sbjct: 2301 SPKY--SPTSPKYSPTSPKYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPTSPVAQN 2355
Query: 466 --SPGYSP---TSPGYSPTSPTYS 522
SP YSP TSP +SPTSP YS
Sbjct: 2356 IASPNYSPYSITSPKFSPTSPAYS 2379
[196][TOP]
>UniRef100_Q7RJS0 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RJS0_PLAYO
Length = 2312
Score = 108 bits (270), Expect = 2e-22
Identities = 78/202 (38%), Positives = 107/202 (52%), Gaps = 31/202 (15%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D GPL++CSFEETV+ILL+AAA+A+ D LRG+TENIMLGQL IGTG ++ +
Sbjct: 1883 RHGINRVDKGPLIKCSFEETVEILLEAAAFAQVDNLRGITENIMLGQLCKIGTGVFDIII 1942
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQ 360
+++ L +A + L + D G T S +G+ ++G+++P+ L SP + S
Sbjct: 1943 DNQKLNDANQ-NLETIQDITSAGFTTPDS--NGSSSNQGIITPDGLQSPLGINTISSPLP 1999
Query: 361 FSPYVGGMAFSPS------------------SSPGYSPSSPG-------------YSPTS 447
FSP SP+ S SPS +SPT
Sbjct: 2000 FSPTYNSNLLSPTLPIDNVNNILSPQCLQNYSDNIMSPSKNNDFNNLDTLQLGGKFSPTQ 2059
Query: 448 PGYSPTSPGYSPTSPGYSPTSP 513
+P SP SPTS +SP SP
Sbjct: 2060 SPRAPLSP-TSPTSVIHSPFSP 2080
Score = 60.8 bits (146), Expect = 5e-08
Identities = 40/85 (47%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDA-QFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSP--- 471
SP Y + N SP S Q S +GG SP YS +SP YSPTSP YSP+SP
Sbjct: 2156 SPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSSPVPN 2215
Query: 472 --------GYSPTSPGYSPTSPTYS 522
YS TSP +SPTSP YS
Sbjct: 2216 NPSSPQYSPYSITSPKFSPTSPAYS 2240
[197][TOP]
>UniRef100_B3L428 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3L428_PLAKH
Length = 2353
Score = 106 bits (265), Expect = 9e-22
Identities = 76/195 (38%), Positives = 104/195 (53%), Gaps = 24/195 (12%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D GPL++CSFEETV+ILL+AAA+A+ D L+G+TENIMLGQL IGTG ++ +
Sbjct: 1870 RHGINRVDRGPLVKCSFEETVEILLEAAAFAQVDNLKGITENIMLGQLCKIGTGVFDIII 1929
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL--------LSPNMR 336
+++ L +A + L + MD G T S TP +G+ SP + SP
Sbjct: 1930 DNQKLSDANQ-NLETMMDITSAGFTTPDSHHGITP--DGLQSPVAINTLNSPLPFSPTYN 1986
Query: 337 LSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG----YSPTSPG------------YSPTS 468
++ +S V G+ SP Y+ S G SP+ +SPT
Sbjct: 1987 VNLLSPTAPLDSVNGI-LSPQCLQNYADGSAGGENIMSPSKNDFNNLDTLKLGGKFSPTQ 2045
Query: 469 PGYSPTSPGYSPTSP 513
SPTS +SP SP
Sbjct: 2046 SPRSPTSVIHSPFSP 2060
Score = 77.0 bits (188), Expect = 7e-13
Identities = 42/76 (55%), Positives = 50/76 (65%)
Frame = +1
Query: 298 MMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGY 477
MM + +LSP ++ + SP +SP+S P Y P+SP YSPTSP YSPTSP Y
Sbjct: 2180 MMKYHSVLSPAYAVTSPKYSPTSP-----KYSPTS-PKYMPTSPKYSPTSPKYSPTSPKY 2233
Query: 478 SPTSPGYSPTSPTYSP 525
SPTSP YSPTSP YSP
Sbjct: 2234 SPTSPKYSPTSPQYSP 2249
Score = 75.9 bits (185), Expect = 2e-12
Identities = 46/104 (44%), Positives = 55/104 (52%), Gaps = 13/104 (12%)
Frame = +1
Query: 253 TPARSPVSGTPYH----------EGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS- 399
+P+ SP S T YH G+ SP + M + + SP+
Sbjct: 2133 SPSYSPTSPT-YHLSSNVNAGGSSGLNDTKAFYSPTSPKNQMDEMNPNMMKYHSVLSPAY 2191
Query: 400 --SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP YSP+SP YSPTSP Y PTSP YSPTSP YSPTSP YSP
Sbjct: 2192 AVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSP 2235
Score = 68.9 bits (167), Expect = 2e-10
Identities = 43/84 (51%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Frame = +1
Query: 286 YHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS---SSPGYSPSSPGYSPTSPGY 456
YH ++SP Y ++ + + SP S M SP +SP YSP+SP YSPTSP Y
Sbjct: 2183 YHS-VLSPAYAVT-SPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKY 2240
Query: 457 SPTSPGYSPTSP-GYSPTSPTYSP 525
SPTSP YSPTSP SP+SP YSP
Sbjct: 2241 SPTSPQYSPTSPVPNSPSSPHYSP 2264
Score = 58.2 bits (139), Expect = 4e-07
Identities = 52/163 (31%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Frame = +1
Query: 85 AYAETDCLRGVTENIMLGQLAPIGTGDCELYLNDEMLKNAIELQLPSYMDGLEFGMTPAR 264
+Y+ T ++ N+ G + G D + + + KN ++ P+ M ++PA
Sbjct: 2135 SYSPTSPTYHLSSNVNAGGSS--GLNDTKAFYSPTSPKNQMDEMNPNMMK-YHSVLSPAY 2191
Query: 265 SPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPT 444
+ V+ Y SP Y SP + ++SP +SP+S P YSP+SP YSPT
Sbjct: 2192 A-VTSPKYSP--TSPKY--SPTSPKYMPTSPKYSPT--SPKYSPTS-PKYSPTSPKYSPT 2243
Query: 445 SPGYSPTSP------------------GYSPTSPGYSPTSPTY 519
SP YSPTSP +SPTSP YS +SP Y
Sbjct: 2244 SPQYSPTSPVPNSPSSPHYSPYAIASPKFSPTSPAYSISSPVY 2286
[198][TOP]
>UniRef100_B8BAW1 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
RepID=B8BAW1_ORYSI
Length = 1449
Score = 106 bits (264), Expect = 1e-21
Identities = 52/66 (78%), Positives = 57/66 (86%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRNDTGPLMRCSFEETVDILLDAA YAE+D LRGV+ENIMLGQLAPIGTG +L
Sbjct: 1376 RHGINRNDTGPLMRCSFEETVDILLDAAVYAESDYLRGVSENIMLGQLAPIGTGGFDLSC 1435
Query: 181 NDEMLK 198
+ +K
Sbjct: 1436 FERRVK 1441
[199][TOP]
>UniRef100_A5K7P4 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5K7P4_PLAVI
Length = 2379
Score = 106 bits (264), Expect = 1e-21
Identities = 77/195 (39%), Positives = 103/195 (52%), Gaps = 24/195 (12%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D GPL++CSFEETV+ILL+AAA+A+ D L+G+TENIMLGQL IGTG ++ +
Sbjct: 1902 RHGINRVDRGPLVKCSFEETVEILLEAAAFAQVDNLKGITENIMLGQLCKIGTGVFDIII 1961
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL--------LSPNMR 336
+++ L +A + L + MD G T S TP +G+ SP + SP
Sbjct: 1962 DNQKLSDANQ-NLETLMDITSAGFTTPDSHHGITP--DGLQSPVAINTLNSPLPFSPTYN 2018
Query: 337 LSPMSDAQFSPYVGGMAFSPSSSPGYSP-SSPGYSPTSPG---------------YSPTS 468
++ +S V G+ SP Y S G S SP +SPT
Sbjct: 2019 VNLLSPTAPLDSVNGI-LSPQCLQNYGDGSGGGESIMSPSKNDFNNLDTLKLGGKFSPTQ 2077
Query: 469 PGYSPTSPGYSPTSP 513
SPTS +SP SP
Sbjct: 2078 SPKSPTSVIHSPFSP 2092
Score = 77.0 bits (188), Expect = 7e-13
Identities = 48/95 (50%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
Frame = +1
Query: 265 SPVSGTPYHEGMMSPNYLL---SPNMR-----LSPMSDAQFSPYVGGMAFSPSSSPGYSP 420
S ++GT + SP L +PNM +SP+ Y SP+S P YSP
Sbjct: 2188 SGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKY------SPTS-PKYSP 2240
Query: 421 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 2241 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSP 2275
Score = 66.2 bits (160), Expect = 1e-09
Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Frame = +1
Query: 286 YHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPT 465
YH ++SP Y ++ + + SP S ++SP +SP+S P YSP+SP YSPTSP YSPT
Sbjct: 2216 YHS-VVSPVYSVT-SPKYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPT 2269
Query: 466 SPGYSPTSP-GYSPTSPTYSP 525
SP YSP+SP +P+SP YSP
Sbjct: 2270 SPQYSPSSPVPNNPSSPHYSP 2290
[200][TOP]
>UniRef100_UPI0000D9E5AB PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) n=1 Tax=Macaca mulatta
RepID=UPI0000D9E5AB
Length = 259
Score = 103 bits (257), Expect = 7e-21
Identities = 58/122 (47%), Positives = 80/122 (65%), Gaps = 11/122 (9%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTGPLM+CSFEETVD+L++AAA+ E+D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 138 RHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLL 197
Query: 181 NDEMLKNAIEL--QLPSY----MDGLEFGMTPARSPVSG-----TPYHEGMMSPNYLLSP 327
+ E K +E+ +P G+ FG P SP+ G TP+++G SP
Sbjct: 198 DAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAP--SPMGGISPAMTPWNQGATPAYGAWSP 255
Query: 328 NM 333
++
Sbjct: 256 SV 257
[201][TOP]
>UniRef100_Q4SF83 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon nigroviridis
RepID=Q4SF83_TETNG
Length = 1745
Score = 101 bits (252), Expect = 3e-20
Identities = 58/122 (47%), Positives = 79/122 (64%), Gaps = 11/122 (9%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR DTGPLM+CSFEETVD+L++A+++ E D ++GV+ENIMLGQLAP GTG +L L
Sbjct: 1329 RHGINRQDTGPLMKCSFEETVDVLMEASSHGECDPMKGVSENIMLGQLAPAGTGCFDLLL 1388
Query: 181 NDEMLKNAIEL--QLPSY----MDGLEFGMTPARSPVSG-----TPYHEGMMSPNYLLSP 327
+ E K +E+ +P G+ FG P SP+SG TP++ G SP
Sbjct: 1389 DAEKCKYGMEIPTNIPGISVAGSTGMFFGSAP--SPMSGMSPAMTPWNTGATPAYGAWSP 1446
Query: 328 NM 333
++
Sbjct: 1447 SV 1448
[202][TOP]
>UniRef100_C6F1F7 DNA-directed RNA polymerase n=1 Tax=Plasmodium gallinaceum
RepID=C6F1F7_PLAGA
Length = 2200
Score = 101 bits (251), Expect = 4e-20
Identities = 76/189 (40%), Positives = 103/189 (54%), Gaps = 18/189 (9%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D GPL++CSFEETV+ILL+AAA+A+ D L+G+TENIMLGQL IGTG ++ +
Sbjct: 1793 RHGINRVDKGPLIKCSFEETVEILLEAAAFAQVDHLKGITENIMLGQLCKIGTGAFDIII 1852
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSP---NYLLSPNMRLSPMS 351
+++ L +A + L + D G T + TP +G+ SP N L SP + SP
Sbjct: 1853 DNQKLNDANQ-NLETIQDITSAGFTTPDTYHGITP--DGLQSPIPINTLNSP-LPFSPTY 1908
Query: 352 DAQ-FSPYVG----GMAFSPSSSPGY-----SPSSPGYS-----PTSPGYSPTSPGYSPT 486
++ SP SP Y SPS ++ +SPT SPT
Sbjct: 1909 NSNLLSPTAPIDNVNNILSPQCLQNYPDNIMSPSKNDFNNLDTLKLGGKFSPTHSPKSPT 1968
Query: 487 SPGYSPTSP 513
S +SP SP
Sbjct: 1969 SIVHSPFSP 1977
Score = 55.5 bits (132), Expect = 2e-06
Identities = 38/88 (43%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Frame = +1
Query: 274 SGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS-SSPGYSPSSPGYSPTSP 450
S +P + N SP + M D + + M+ S +SP YSP SP YSPTSP
Sbjct: 2042 SYSPTSPSYNADNVYYSPTSPKNQMDDVKSNIKYNVMSPVYSVTSPKYSPMSPQYSPTSP 2101
Query: 451 -GYSPTSPGYSP---TSPGYSPTSPTYS 522
+P SP YSP TSP +SPTSP YS
Sbjct: 2102 VANNPGSPHYSPYSITSPKFSPTSPAYS 2129
[203][TOP]
>UniRef100_P11414 DNA-directed RNA polymerase II subunit RPB1 (Fragment) n=1
Tax=Cricetulus griseus RepID=RPB1_CRIGR
Length = 467
Score = 99.4 bits (246), Expect = 1e-19
Identities = 53/97 (54%), Positives = 61/97 (62%)
Frame = +1
Query: 235 GLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGY 414
G G +PA SP G+P G SP Y+ SP +SP +SP A+ P S GY
Sbjct: 53 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSP----SYSPT--SPAYEPRSPGGY 105
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 106 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 142
Score = 89.7 bits (221), Expect = 1e-16
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 PSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSP 396
P+Y G TP S T SP+Y SPN + S + SP ++SP
Sbjct: 95 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP-----SYSP 149
Query: 397 SSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 150 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 191
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 137 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 188
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 189 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 219
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 144 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 195
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 196 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 226
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 151 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 202
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 203 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 233
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 158 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 209
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 210 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 240
Score = 83.6 bits (205), Expect = 8e-15
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 165 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 216
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 217 YSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP 247
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 179 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 230
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP Y+PTSP+YSP
Sbjct: 231 YSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 261
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 186 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 237
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP Y+PTSP YSPTSP+YSP
Sbjct: 238 YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 268
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SP+Y SPN + + SP ++SP+S P YSP+SP
Sbjct: 221 SPSYSPTSPS---YSPTSPSYSPTSPNYSPTSPNYTPTSP-----SYSPTS-PSYSPTSP 271
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 272 NYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 303
Score = 82.8 bits (203), Expect = 1e-14
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S + SPNY SPN + S + SP ++SP+S P Y+P+SP
Sbjct: 228 SPSYSPTSPS---YSPTSPNYSPTSPNYTPTSPSYSPTSP-----SYSPTS-PNYTPTSP 278
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP Y+P
Sbjct: 279 NYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTP 310
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/97 (50%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP Y +P S +SP ++SP+S SP Y
Sbjct: 291 SPSYSPTSPS---YSPSSPRY--TPQSPTYTPSSPSYSP--SSPSYSPTSPKYTPTSPSY 343
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 344 SPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP 380
Score = 81.3 bits (199), Expect = 4e-14
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP +SP+S SP Y
Sbjct: 207 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPTSPN--YSPTSPNYTPTSPSY 259
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP Y+PTSP YSPTSP YSPTSP+YSP
Sbjct: 260 SPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 296
Score = 80.1 bits (196), Expect = 9e-14
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP+ + +++P ++SPSS SP YSP+SP YSPTSP YSPT
Sbjct: 319 SPSY--SPSSPSYSPTSPKYTPT--SPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 374
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSPT+P YSPTSPTYSP
Sbjct: 375 SPTYSPTTPKYSPTSPTYSP 394
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 351 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 398
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 399 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 429
Score = 74.7 bits (182), Expect = 4e-12
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
TP S T SPNY SPN SP S + +SP+S P YSP+SP
Sbjct: 253 TPTSPSYSPTSPSYSPTSPNYTPTSPNY--SPTSPS----------YSPTS-PSYSPTSP 299
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP Y+P SP Y+P+SP YSP+SP+YSP
Sbjct: 300 SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSP 331
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 375 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 419
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 420 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 452
Score = 55.8 bits (133), Expect = 2e-06
Identities = 34/83 (40%), Positives = 38/83 (45%), Gaps = 33/83 (39%)
Frame = +1
Query: 376 GGMAFSPSSSPGYSPSSPGYSPT-------------------------SPGYSPTSP--- 471
G FSPS++ S SPGYSP SP YSPTSP
Sbjct: 39 GAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYE 98
Query: 472 -----GYSPTSPGYSPTSPTYSP 525
GY+P SP YSPTSP+YSP
Sbjct: 99 PRSPGGYTPQSPSYSPTSPSYSP 121
[204][TOP]
>UniRef100_Q0U9K8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q0U9K8_PHANO
Length = 1720
Score = 98.6 bits (244), Expect = 2e-19
Identities = 46/70 (65%), Positives = 57/70 (81%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINRNDTG LMRCSFEETV+ILL+AA + E D RGV+ENIMLGQLAP+GTG+ ++ +
Sbjct: 1413 RHGINRNDTGALMRCSFEETVEILLEAAGFGELDDCRGVSENIMLGQLAPMGTGEFDVVM 1472
Query: 181 NDEMLKNAIE 210
+ ML +E
Sbjct: 1473 DSSMLLTMVE 1482
[205][TOP]
>UniRef100_B9FZ52 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9FZ52_ORYSJ
Length = 208
Score = 98.2 bits (243), Expect = 3e-19
Identities = 47/51 (92%), Positives = 49/51 (96%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPI 153
RHGINRNDTGPLMRCSFEETVDILLDAA YAE+D LRGVTENIMLG+LAPI
Sbjct: 125 RHGINRNDTGPLMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGRLAPI 175
[206][TOP]
>UniRef100_C5LSN9 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5LSN9_9ALVE
Length = 1667
Score = 97.1 bits (240), Expect = 7e-19
Identities = 46/68 (67%), Positives = 57/68 (83%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR + GPLMR SFEE V++L+DAA YAETD +RGV+ENIMLGQLAPIGT +CEL +
Sbjct: 1443 RHGINRVERGPLMRSSFEEMVEMLMDAACYAETDHMRGVSENIMLGQLAPIGTAECELLI 1502
Query: 181 NDEMLKNA 204
+ + L +A
Sbjct: 1503 DTDKLVDA 1510
[207][TOP]
>UniRef100_C5LGU4 DNA-directed RNA polymerase II largest subunit, putative n=1
Tax=Perkinsus marinus ATCC 50983 RepID=C5LGU4_9ALVE
Length = 280
Score = 97.1 bits (240), Expect = 7e-19
Identities = 46/68 (67%), Positives = 57/68 (83%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR + GPLMR SFEE V++L+DAA YAETD +RGV+ENIMLGQLAPIGT +CEL +
Sbjct: 104 RHGINRVERGPLMRSSFEEMVEMLMDAACYAETDHMRGVSENIMLGQLAPIGTAECELLI 163
Query: 181 NDEMLKNA 204
+ + L +A
Sbjct: 164 DTDKLVDA 171
[208][TOP]
>UniRef100_C4QEL8 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
RepID=C4QEL8_SCHMA
Length = 1785
Score = 95.5 bits (236), Expect = 2e-18
Identities = 76/193 (39%), Positives = 99/193 (51%), Gaps = 26/193 (13%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTG L RCSFEETVDIL++AA ++E D + GV+E IMLGQLA IGTG +L L
Sbjct: 1306 RHGLNRLDTGALARCSFEETVDILMEAAIHSECDPMAGVSETIMLGQLARIGTGCFDLLL 1365
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSG-----TPYHEGMMSPNYLLSPNMR--- 336
+ + A + L + G+ P PV G TP+ + SP+ R
Sbjct: 1366 DSAKCQEAQPIPLGGVL-GMGLFNAPDGIPVLGDSGYHTPWDNAHSPVGSVDSPSYRGGL 1424
Query: 337 --LSPMSDAQFSPYVGGMAFSPSSSPGYSP--SSP----GYSP------TSP----GYSP 462
+ +A FSP M + S SPG SP SP +SP +SP G
Sbjct: 1425 GGATAPHNAMFSP---AMRYDSSLSPGRSPQLDSPRTPEAFSPAAYVGFSSPMSFMGTPQ 1481
Query: 463 TSPGYSPTSPGYS 501
T G +SPG+S
Sbjct: 1482 TELGSPGSSPGHS 1494
[209][TOP]
>UniRef100_Q5DD92 SJCHGC09439 protein n=1 Tax=Schistosoma japonicum
RepID=Q5DD92_SCHJA
Length = 503
Score = 94.0 bits (232), Expect = 6e-18
Identities = 71/181 (39%), Positives = 93/181 (51%), Gaps = 13/181 (7%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHG+NR DTG L RCSFEETVDIL++AA ++E D + GV+E IMLGQLA IGTG +L L
Sbjct: 5 RHGLNRLDTGALARCSFEETVDILMEAAIHSEYDPMAGVSETIMLGQLARIGTGCFDLLL 64
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQ 360
+ + A + L G GM + P EG+ + L SP + L+ +D
Sbjct: 65 DSAKCQEAQPIPL-----GGMLGM----GVLFNAPGFEGLAA---LASPGLGLTMNADG- 111
Query: 361 FSPYVGGMAFSPSSSPGYSP-----SSPGY--------SPTSPGYSPTSPGYSPTSPGYS 501
P +G + +SP SSP Y +P S +SP S SPG S
Sbjct: 112 -IPVLGDSGYHTPWDNAHSPVGSVDSSPSYRGVFGGATAPHSAMFSPAMRYDSSLSPGRS 170
Query: 502 P 504
P
Sbjct: 171 P 171
[210][TOP]
>UniRef100_UPI000051AA8E PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) n=1 Tax=Apis mellifera
RepID=UPI000051AA8E
Length = 452
Score = 91.3 bits (225), Expect = 4e-17
Identities = 49/96 (51%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPN---YLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYS 417
G++PA S S P G P+ Y +SP SP Y+ SSP YS
Sbjct: 95 GLSPAYSAYSPQPGSPGSPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSPSITPSSPNYS 154
Query: 418 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 155 PTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 190
Score = 87.0 bits (214), Expect = 7e-16
Identities = 48/92 (52%), Positives = 57/92 (61%)
Frame = +1
Query: 250 MTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+TP+ S T SPNY SP + +SP ++SP+S P YSP+SP
Sbjct: 146 ITPSSPNYSPTSPTYSPTSPNY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSP 200
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 201 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 232
Score = 86.7 bits (213), Expect = 9e-16
Identities = 49/94 (52%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Frame = +1
Query: 265 SPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPS 423
SP G SP YL SP++ S + + SP +SP+S SP YSP+
Sbjct: 123 SPAGGASPSYSPTSPAYLPTSPSITPSSPNYSPTSP-----TYSPTSPNYSPTSPSYSPT 177
Query: 424 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 178 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 211
Score = 86.3 bits (212), Expect = 1e-15
Identities = 50/97 (51%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Frame = +1
Query: 247 GMTPARSPVSGT--PYHEGMM--SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGY 414
G +P+ SP S P + SPNY SP + +SP ++SP+S P Y
Sbjct: 127 GASPSYSPTSPAYLPTSPSITPSSPNY--SPTSPTYSPTSPNYSPT--SPSYSPTS-PSY 181
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 182 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 218
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 171 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 222
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 223 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 253
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 178 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 229
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 230 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 260
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 185 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 236
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 237 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 267
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 192 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 243
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 244 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 274
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 199 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 250
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 251 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 281
Score = 80.9 bits (198), Expect = 5e-14
Identities = 64/178 (35%), Positives = 77/178 (43%), Gaps = 47/178 (26%)
Frame = +1
Query: 133 LGQLAPIGTGDCELYLNDEMLKNAIELQLPSYMD-----GLEFGM--TPARSPVSGTPYH 291
+GQL IGTG +L L+ E K IE+ + G+ FG TP+ SP
Sbjct: 1 MGQLPRIGTGCFDLLLDAEKCKVGIEIPMAVGAGVMGTAGMFFGSVATPSMSP------- 53
Query: 292 EGMMSPNYLLSPNMRLSPMSDAQFSPYV-GGMAFSPS----------------------- 399
M+P +P S MS A S GG FSPS
Sbjct: 54 --QMTPWMGATPGYGASSMSPALGSGMTPGGACFSPSGASDASGLSPAYSAYSPQPGSPG 111
Query: 400 ----------------SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP YSP+SP Y PTSP +P+SP YSPTSP YSPTSP YSP
Sbjct: 112 SPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSP 169
Score = 80.9 bits (198), Expect = 5e-14
Identities = 45/91 (49%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 206 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 257
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP+SP Y+P
Sbjct: 258 YSPTSPSYSPTSPSYSPTSPSYSPSSPNYTP 288
Score = 80.1 bits (196), Expect = 9e-14
Identities = 48/92 (52%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P+ SP S P H S Y SPN + + + SP +SPSS+ YSP+SP
Sbjct: 360 SPSYSPSS--PQHTASGSTRYSPSSPNYSPTSPTYSPTSPQ-----YSPSSTK-YSPTSP 411
Query: 430 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSP PGYSPTSPTYSP
Sbjct: 412 TYTPTSPSYSPTSPTYSPPVPGYSPTSPTYSP 443
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 213 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 264
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSP+SP Y+P SP+YSP
Sbjct: 265 YSPTSPSYSPTSPSYSPSSPNYTPASPSYSP 295
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/91 (48%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 220 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 271
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSP+SP Y+P SP YSPTSP+YSP
Sbjct: 272 YSPTSPSYSPSSPNYTPASPSYSPTSPSYSP 302
Score = 79.0 bits (193), Expect = 2e-13
Identities = 47/96 (48%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-----LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYS 417
+P+ SP S + SPNY SP S Q+SP ++SPSS P YS
Sbjct: 269 SPSYSPTSPS---YSPSSPNYTPASPSYSPTSPSYSPSSPQYSP--ASPSYSPSS-PKYS 322
Query: 418 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P+SP YSPTSP ++ TSP Y+P SP YSPTSPTYSP
Sbjct: 323 PTSPSYSPTSPSFAGTSPQYTPASPTYSPTSPTYSP 358
Score = 78.2 bits (191), Expect = 3e-13
Identities = 46/97 (47%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
+P+ SP S + SP+Y SP + +SP ++SPSS SP Y
Sbjct: 241 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPSSPNYTPASPSY 293
Query: 415 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP+SP YSP+SP YSP SP YSP+SP YSPTSP+YSP
Sbjct: 294 SPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSP 330
Score = 77.8 bits (190), Expect = 4e-13
Identities = 44/91 (48%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSPSSP
Sbjct: 234 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPSSPN 285
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+P SP YSPTSP YSP+SP YSP SP+YSP
Sbjct: 286 YTPASPSYSPTSPSYSPSSPQYSPASPSYSP 316
Score = 77.8 bits (190), Expect = 4e-13
Identities = 48/98 (48%), Positives = 59/98 (60%), Gaps = 7/98 (7%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPG 411
+P+ SP S + SP+Y SPN + S + SP ++SPSS SP
Sbjct: 262 SPSYSPTSPS---YSPTSPSYSPSSPNYTPASPSYSPTSP-----SYSPSSPQYSPASPS 313
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPSSP YSPTSP YSPTSP ++ TSP Y+P SPTYSP
Sbjct: 314 YSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPASPTYSP 351
Score = 75.5 bits (184), Expect = 2e-12
Identities = 40/72 (55%), Positives = 46/72 (63%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSP 483
SPNY SP + Q+SP +SP+S P Y+P+SP YSPTSP YSP PGYSP
Sbjct: 382 SPNY--SPTSPTYSPTSPQYSP--SSTKYSPTS-PTYTPTSPSYSPTSPTYSPPVPGYSP 436
Query: 484 TSPGYSPTSPTY 519
TSP YSP SP Y
Sbjct: 437 TSPTYSPASPAY 448
Score = 73.2 bits (178), Expect = 1e-11
Identities = 49/112 (43%), Positives = 57/112 (50%), Gaps = 21/112 (18%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGY 414
TPA S T SP Y SP S ++SP ++SP+S SP Y
Sbjct: 287 TPASPSYSPTSPSYSPSSPQY--SPASPSYSPSSPKYSPT--SPSYSPTSPSFAGTSPQY 342
Query: 415 SPSSPGYSPTSPGYSPTSPG---------------YSPTSPGYSPTSPTYSP 525
+P+SP YSPTSP YSPTSP YSP+SP YSPTSPTYSP
Sbjct: 343 TPASPTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSP 394
Score = 70.9 bits (172), Expect = 5e-11
Identities = 44/99 (44%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA S + SP+Y SP + Q++P +SP+S P YSP+SP
Sbjct: 308 SPASPSYSPSSPKYSPTSPSY--SPTSPSFAGTSPQYTP--ASPTYSPTS-PTYSPTSPS 362
Query: 433 YSPTSPG--------YSPTSPGYSPTSPGYSPTSPTYSP 525
YSP+SP YSP+SP YSPTSP YSPTSP YSP
Sbjct: 363 YSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSP 401
[211][TOP]
>UniRef100_C4Y5N3 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y5N3_CLAL4
Length = 281
Score = 87.0 bits (214), Expect = 7e-16
Identities = 55/107 (51%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Frame = +1
Query: 217 LPSYMDGLEFGMTPARSPVS---GTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGM 384
L SY G + MT SP S +P G SP Y SP + S + SP
Sbjct: 43 LTSY--GGQPSMTSPTSPFSYGGASPAFGGATSPGYGGTSPTYSPTSPSYSPTSP----- 95
Query: 385 AFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
++SP+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 96 SYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 141
Score = 85.5 bits (210), Expect = 2e-15
Identities = 48/93 (51%), Positives = 58/93 (62%)
Frame = +1
Query: 247 GMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSS 426
G +P SP S + SP+Y SP + +SP ++SP+S P YSP+S
Sbjct: 78 GTSPTYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 129
Query: 427 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 130 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 162
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 101 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 152
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 153 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 183
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 108 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 159
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 160 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 190
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 115 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 166
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 167 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 197
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 122 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 173
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 174 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 204
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 129 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 180
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 181 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 211
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 136 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 187
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 188 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 218
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 143 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 194
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 195 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 225
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 150 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 201
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 202 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 232
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 157 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 208
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 209 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 239
Score = 84.0 bits (206), Expect = 6e-15
Identities = 47/91 (51%), Positives = 58/91 (63%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 164 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 215
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 216 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 246
Score = 83.2 bits (204), Expect = 1e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 171 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 222
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 223 YSPTSPSYSPTSPSYSPTSPSYSPTSPQYSP 253
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 178 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 229
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 230 YSPTSPSYSPTSPSYSPTSPQYSPTSPQYSP 260
Score = 79.7 bits (195), Expect = 1e-13
Identities = 46/91 (50%), Positives = 57/91 (62%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 185 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 236
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP SP+YSP
Sbjct: 237 YSPTSPSYSPTSPQYSPTSPQYSPGSPSYSP 267
Score = 73.2 bits (178), Expect = 1e-11
Identities = 43/89 (48%), Positives = 54/89 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + +SP ++SP+S P YSP+SP
Sbjct: 192 SPSYSPTSPS---YSPTSPSY--SPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSPS 243
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTY 519
YSPTSP YSPTSP YSP SP YSP SP+Y
Sbjct: 244 YSPTSPQYSPTSPQYSPGSPSYSPRSPSY 272
[212][TOP]
>UniRef100_C5LSN8 P35 antigen, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC
50983 RepID=C5LSN8_9ALVE
Length = 170
Score = 84.7 bits (208), Expect = 4e-15
Identities = 49/91 (53%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 26 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 77
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 78 YSPTSPAYSPTSPAYSPTSPAYSPTSPSYSP 108
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 33 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 84
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 85 YSPTSPAYSPTSPAYSPTSPSYSPTSPAYSP 115
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 40 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 91
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 92 YSPTSPAYSPTSPSYSPTSPAYSPTSPAYSP 122
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 47 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPA 98
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 99 YSPTSPSYSPTSPAYSPTSPAYSPTSPAYSP 129
Score = 84.3 bits (207), Expect = 5e-15
Identities = 49/91 (53%), Positives = 55/91 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 54 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PAYSPTSPS 105
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 106 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 136
Score = 83.2 bits (204), Expect = 1e-14
Identities = 43/62 (69%), Positives = 47/62 (75%)
Frame = +1
Query: 340 SPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY 519
SP S A +SP A+SP+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP Y
Sbjct: 2 SPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 57
Query: 520 SP 525
SP
Sbjct: 58 SP 59
Score = 83.2 bits (204), Expect = 1e-14
Identities = 43/62 (69%), Positives = 47/62 (75%)
Frame = +1
Query: 340 SPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY 519
SP S A +SP A+SP+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP Y
Sbjct: 9 SPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 64
Query: 520 SP 525
SP
Sbjct: 65 SP 66
Score = 80.9 bits (198), Expect = 5e-14
Identities = 36/46 (78%), Positives = 39/46 (84%)
Frame = +1
Query: 388 FSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 1 YSPTS-PAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 45
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/89 (52%), Positives = 53/89 (59%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 61 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPAYSPT--SPAYSPTS-PSYSPTSPA 112
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTY 519
YSPTSP YSPTSP YSPTSP YSPTSP Y
Sbjct: 113 YSPTSPAYSPTSPAYSPTSPAYSPTSPAY 141
Score = 64.3 bits (155), Expect = 5e-09
Identities = 45/104 (43%), Positives = 52/104 (50%), Gaps = 16/104 (15%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+PA SP S SP Y SP + +SP A+SP+S P YSP+SP
Sbjct: 75 SPAYSPTSPA---YSPTSPAY--SPTSPAYSPTSPSYSPT--SPAYSPTS-PAYSPTSPA 126
Query: 433 YSPTSPGYSPTSPGY----------------SPTSPGYSPTSPT 516
YSPTSP YSPTSP Y SPTSP YS TSP+
Sbjct: 127 YSPTSPAYSPTSPAYYHPLVTSSDEGPVVRYSPTSPAYSNTSPS 170
[213][TOP]
>UniRef100_A5DCV1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DCV1_PICGU
Length = 224
Score = 82.0 bits (201), Expect = 2e-14
Identities = 44/85 (51%), Positives = 52/85 (61%)
Frame = +1
Query: 271 VSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSP 450
V+ P+H P +LLSP+ +SP+S P YSP+SP YSPTSP
Sbjct: 120 VTHQPHH-----PTHLLSPS-------------------YSPTS-PSYSPTSPSYSPTSP 154
Query: 451 GYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 155 SYSPTSPSYSPTSPSYSPTSPSYSP 179
[214][TOP]
>UniRef100_UPI000151A8B4 hypothetical protein PGUG_01106 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B4
Length = 224
Score = 80.5 bits (197), Expect = 7e-14
Identities = 44/85 (51%), Positives = 52/85 (61%)
Frame = +1
Query: 271 VSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSP 450
V+ P+H P +LLSP+ +SP+S P YSP+SP YSPTSP
Sbjct: 120 VTHQPHH-----PTHLLSPS-------------------YSPTS-PSYSPTSPSYSPTSP 154
Query: 451 GYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 155 LYSPTSPSYSPTSPSYSPTSPSYSP 179
[215][TOP]
>UniRef100_UPI00006A20E2 DNA-directed RNA polymerase II subunit RPB1 (EC 2.7.7.6) (RNA
polymerase II subunit B1) (DNA-directed RNA polymerase
II subunit A) (DNA-directed RNA polymerase III largest
subunit). n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A20E2
Length = 162
Score = 80.5 bits (197), Expect = 7e-14
Identities = 41/65 (63%), Positives = 46/65 (70%), Gaps = 6/65 (9%)
Frame = +1
Query: 349 SDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTS 510
S +SP ++SP+S SP YSPSSP Y+PTSP YSPTSP YSPTSP YSPTS
Sbjct: 13 SSPSYSP--SSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 70
Query: 511 PTYSP 525
PTYSP
Sbjct: 71 PTYSP 75
Score = 80.1 bits (196), Expect = 9e-14
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP+ + +++P ++SPSS SP YSP+SP YSPTSP YSPT
Sbjct: 14 SPSY--SPSSPSYSPTSPKYTPT--SPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 69
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSPT+P YSPTSPTYSP
Sbjct: 70 SPTYSPTTPKYSPTSPTYSP 89
Score = 78.6 bits (192), Expect = 3e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 46 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPV 93
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 94 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 124
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + + ++SP +SP YSP+SP
Sbjct: 70 SPTYSPT--TPKYSPT-SPTY--SPTSPVYTPTSPKYSP----------TSPTYSPTSPK 114
Query: 433 YSPTSPGYSPTSP---GYSPTSPGYSPTSPTYS 522
YSPTSP YSPTSP YSPTSPGYSPTSPTYS
Sbjct: 115 YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYS 147
Score = 73.2 bits (178), Expect = 1e-11
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +1
Query: 403 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP Y+PSSP YSP+SP YSPTSP Y+PTSP YSP+SP Y+P
Sbjct: 7 SPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTP 47
Score = 70.1 bits (170), Expect = 9e-11
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1
Query: 406 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
P Y+P SP Y+P+SP YSP+SP YSPTSP Y+PTSP+YSP
Sbjct: 1 PRYTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSP 40
[216][TOP]
>UniRef100_Q58EF0 Polr2a protein (Fragment) n=2 Tax=Danio rerio RepID=Q58EF0_DANRE
Length = 161
Score = 80.5 bits (197), Expect = 7e-14
Identities = 41/65 (63%), Positives = 46/65 (70%), Gaps = 6/65 (9%)
Frame = +1
Query: 349 SDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTS 510
S +SP ++SP+S SP YSPSSP Y+PTSP YSPTSP YSPTSP YSPTS
Sbjct: 14 SSPSYSP--SSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTS 71
Query: 511 PTYSP 525
PTYSP
Sbjct: 72 PTYSP 76
Score = 80.1 bits (196), Expect = 9e-14
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYSPT 465
SP+Y SP+ + +++P ++SPSS SP YSP+SP YSPTSP YSPT
Sbjct: 15 SPSY--SPSSPSYSPTSPKYTPT--SPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 70
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSPT+P YSPTSPTYSP
Sbjct: 71 SPTYSPTTPKYSPTSPTYSP 90
Score = 79.0 bits (193), Expect = 2e-13
Identities = 45/91 (49%), Positives = 51/91 (56%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
TP S T SP Y SP + ++SP +SP YSP+SP
Sbjct: 47 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSP----------TSPTYSPTSPT 94
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSPTSP YSPTSP YSPTSPTYSP
Sbjct: 95 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 125
Score = 73.2 bits (178), Expect = 1e-11
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = +1
Query: 379 GMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
G ++P S P Y+PSSP YSP+SP YSPTSP Y+PTSP YSP+SP Y+P
Sbjct: 1 GPRYTPQS-PTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTP 48
Score = 66.2 bits (160), Expect = 1e-09
Identities = 45/91 (49%), Positives = 53/91 (58%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P SP TP + SP Y SP + ++SP +SP+S P YSP+SP
Sbjct: 71 SPTYSPT--TPKYSPT-SPTY--SPTSPTYTPTSPKYSPT--SPTYSPTS-PKYSPTSPT 122
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP S YSPTSPGYSPTSPTYSP
Sbjct: 123 YSPTSPKGST----YSPTSPGYSPTSPTYSP 149
[217][TOP]
>UniRef100_Q5EXZ8 RNA polymerase II largest subunit (Fragment) n=1 Tax=Periplaneta
americana RepID=Q5EXZ8_PERAM
Length = 97
Score = 80.1 bits (196), Expect = 9e-14
Identities = 47/91 (51%), Positives = 56/91 (61%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S P H S Y SP+ + +SP +SPSSS YSP+SP
Sbjct: 5 SPSYSPSS--PQHTPSASTRY--SPSSPSYSPTSPTYSPT--SPQYSPSSSK-YSPTSPT 57
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+PTSP YSP+SP YSP PGYSPTSPTYSP
Sbjct: 58 YTPTSPNYSPSSPTYSPAVPGYSPTSPTYSP 88
Score = 77.8 bits (190), Expect = 4e-13
Identities = 43/89 (48%), Positives = 54/89 (60%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P +P + T Y SP+Y SP + Q+SP +SP+S P Y+P+SP
Sbjct: 12 SPQHTPSASTRYSPS--SPSY--SPTSPTYSPTSPQYSP--SSSKYSPTS-PTYTPTSPN 64
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTY 519
YSP+SP YSP PGYSPTSP YSPTSP Y
Sbjct: 65 YSPSSPTYSPAVPGYSPTSPTYSPTSPAY 93
Score = 65.5 bits (158), Expect = 2e-09
Identities = 32/47 (68%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Frame = +1
Query: 388 FSPSSSPGYSPSSPGYSPT-SPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP+S P YSPSSP ++P+ S YSP+SP YSPTSP YSPTSP YSP
Sbjct: 1 YSPTS-PSYSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSP 46
[218][TOP]
>UniRef100_A9CTJ8 DNA-directed RNA polymerase n=1 Tax=Enterocytozoon bieneusi H348
RepID=A9CTJ8_ENTBH
Length = 1541
Score = 80.1 bits (196), Expect = 9e-14
Identities = 67/192 (34%), Positives = 94/192 (48%), Gaps = 19/192 (9%)
Frame = +1
Query: 1 RHGINRN-DTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELY 177
RHG+NR L R SFEETVDILL+AAA AE + G+TENIM+GQLAP+GTG+ +L
Sbjct: 1292 RHGVNREIKASALKRASFEETVDILLEAAATAEENPAHGITENIMMGQLAPLGTGNIQLI 1351
Query: 178 LNDEML-------------KNAIELQLPSYMDGL---EFGMTPARSPVSGTPYHEGMMSP 309
L+ + L KN I L P++ + L + + +P HE +
Sbjct: 1352 LDIKKLDQIVNKAFINTVDKNLIMLNSPAFTEALLIEQENCILSEDIGLFSPEHEELSDF 1411
Query: 310 NYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYS--PTSPGYSP 483
N + P SP S+ P +P SS + +S Y+P S ++ P S +
Sbjct: 1412 NNIKIPEYNDSPNSE----PNTYNSLNTPISSEKVN-NSVMYTPNSFYFNQQPESIYFPG 1466
Query: 484 TSPGYSPTSPTY 519
T+ Y S Y
Sbjct: 1467 TNGSYFAASGEY 1478
[219][TOP]
>UniRef100_C6F0A2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0A2_PLAFA
Length = 223
Score = 79.3 bits (194), Expect = 1e-13
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = +1
Query: 298 MMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGY 477
+MSP Y ++ + + SP S ++SP +SP+S P YSP+SP YSPTSP YSPTSP Y
Sbjct: 35 VMSPVYSVT-SPKYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPTSPKY 89
Query: 478 SPTSPGYSPTSPTYSP 525
SPTSP YSPTSP YSP
Sbjct: 90 SPTSPKYSPTSPKYSP 105
Score = 77.8 bits (190), Expect = 4e-13
Identities = 43/74 (58%), Positives = 49/74 (66%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSP 483
SP Y SP + ++SP +SP+S P YSP+SP YSPTSP YSPTSP YSP
Sbjct: 51 SPKY--SPTSPKYSPTSPKYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPTSPKYSP 105
Query: 484 TSPGYSPTSPTYSP 525
TSP YSPTSP YSP
Sbjct: 106 TSPKYSPTSPKYSP 119
Score = 71.2 bits (173), Expect = 4e-11
Identities = 40/70 (57%), Positives = 46/70 (65%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSP 483
SP Y SP + ++SP +SP+S P YSP+SP YSPTSP YSPTSP YSP
Sbjct: 58 SPKY--SPTSPKYSPTSPKYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPTSPKYSP 112
Query: 484 TSPGYSPTSP 513
TSP YSPTSP
Sbjct: 113 TSPKYSPTSP 122
Score = 63.2 bits (152), Expect = 1e-08
Identities = 44/108 (40%), Positives = 52/108 (48%), Gaps = 18/108 (16%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T SP Y SP + ++SP +SP+S P YSP+SP
Sbjct: 48 SPTSPKYSPTSPKYSPTSPKY--SPTSPKYSPTSPKYSPT--SPKYSPTS-PKYSPTSPK 102
Query: 433 YSPTSPGYSPTSPGYSPTSP------------------GYSPTSPTYS 522
YSPTSP YSPTSP YSPTSP +SPTSP YS
Sbjct: 103 YSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYS 150
Score = 62.8 bits (151), Expect = 1e-08
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = +1
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+ SP YS TSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 33 YNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSP 70
Score = 57.0 bits (136), Expect = 8e-07
Identities = 41/107 (38%), Positives = 50/107 (46%), Gaps = 18/107 (16%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P S T SP Y SP + ++SP +SP+S P YSP+SP
Sbjct: 55 SPTSPKYSPTSPKYSPTSPKY--SPTSPKYSPTSPKYSPT--SPKYSPTS-PKYSPTSPK 109
Query: 433 YSPTSPGYSPTSP------------------GYSPTSPGYSPTSPTY 519
YSPTSP YSPTSP +SPTSP YS +SP Y
Sbjct: 110 YSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSPVY 156
[220][TOP]
>UniRef100_C6F1E9 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1E9_PLAVI
Length = 225
Score = 79.0 bits (193), Expect = 2e-13
Identities = 46/80 (57%), Positives = 57/80 (71%)
Frame = +1
Query: 286 YHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPT 465
YH ++SP Y ++ + + SP S ++SP +SP+S P YSP+SP YSPTSP YSPT
Sbjct: 48 YHS-VVSPVYSVT-SPKYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPT 101
Query: 466 SPGYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP YSP
Sbjct: 102 SPKYSPTSPKYSPTSPQYSP 121
Score = 78.2 bits (191), Expect = 3e-13
Identities = 46/95 (48%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Frame = +1
Query: 265 SPVSGTPYHEGMMSPNYLL---SPNMR-----LSPMSDAQFSPYVGGMAFSPSSSPGYSP 420
S ++GT + SP L +PNM +SP+ Y +SP YSP
Sbjct: 20 SGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSP 79
Query: 421 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 80 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 114
Score = 65.1 bits (157), Expect = 3e-09
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSP 483
SP Y SP + ++SP +SP+S P YSP+SP YSPTSP YSPTSP YSP
Sbjct: 67 SPKY--SPTSPKYSPTSPKYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPTSPQYSP 121
Query: 484 TSP-GYSPTSPTYSP 525
+SP +P+SP YSP
Sbjct: 122 SSPVPNNPSSPHYSP 136
[221][TOP]
>UniRef100_C6F1F0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F0_PLAVI
Length = 218
Score = 78.2 bits (191), Expect = 3e-13
Identities = 46/95 (48%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Frame = +1
Query: 265 SPVSGTPYHEGMMSPNYLL---SPNMR-----LSPMSDAQFSPYVGGMAFSPSSSPGYSP 420
S ++GT + SP L +PNM +SP+ Y +SP YSP
Sbjct: 20 SGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSP 79
Query: 421 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 80 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSP 114
Score = 70.9 bits (172), Expect = 5e-11
Identities = 42/76 (55%), Positives = 54/76 (71%)
Frame = +1
Query: 286 YHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPT 465
YH ++SP Y ++ + + SP S ++SP +SP+S P YSP+SP YSPTSP YSPT
Sbjct: 48 YHS-VVSPVYSVT-SPKYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPT 101
Query: 466 SPGYSPTSPGYSPTSP 513
SP YSPTSP YSP+SP
Sbjct: 102 SPKYSPTSPQYSPSSP 117
[222][TOP]
>UniRef100_C6F1F2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F2_9APIC
Length = 232
Score = 77.4 bits (189), Expect = 6e-13
Identities = 45/84 (53%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
Frame = +1
Query: 286 YHEGMMSPNYLLSPNMRLSPMSDAQFSP----YVGGMAFSPSSSPGYSPSSPGYSPTSPG 453
YH ++SP Y ++ + + SP S ++SP Y+ +SP YSP+SP YSPTSP
Sbjct: 48 YHS-VVSPVYSVT-SPKYSPTSP-KYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPK 104
Query: 454 YSPTSPGYSPTSPGYSPTSPTYSP 525
YSPTSP YSPTSP YSPTSP YSP
Sbjct: 105 YSPTSPKYSPTSPKYSPTSPQYSP 128
Score = 77.0 bits (188), Expect = 7e-13
Identities = 43/82 (52%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Frame = +1
Query: 298 MMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYS 459
MM + ++SP ++ + SP +SP+S SP YSP+SP YSPTSP YS
Sbjct: 45 MMKYHSVVSPVYSVTSPKYSPTSP-----KYSPTSPKYLPTSPKYSPTSPKYSPTSPKYS 99
Query: 460 PTSPGYSPTSPGYSPTSPTYSP 525
PTSP YSPTSP YSPTSP YSP
Sbjct: 100 PTSPKYSPTSPKYSPTSPKYSP 121
Score = 70.9 bits (172), Expect = 5e-11
Identities = 56/143 (39%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Frame = +1
Query: 88 YAETDCLRGVTENIMLGQLAPIGTGDCELYLNDEMLKNAIELQLPSYMDGLEFGMTPARS 267
Y+ T V+ N G + G D + + + KN + P+ M S
Sbjct: 1 YSPTSPTYHVSNNANAGGSS--GLNDTKAFYSPTSPKNQLSEMNPNMMK-----YHSVVS 53
Query: 268 PV-SGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPT 444
PV S T SP Y SP + ++SP +SP+S P YSP+SP YSPT
Sbjct: 54 PVYSVTSPKYSPTSPKY--SPTSPKYLPTSPKYSPT--SPKYSPTS-PKYSPTSPKYSPT 108
Query: 445 SPGYSPTSPGYSPTSPGYSPTSP 513
SP YSPTSP YSPTSP YSPTSP
Sbjct: 109 SPKYSPTSPKYSPTSPQYSPTSP 131
Score = 63.9 bits (154), Expect = 6e-09
Identities = 43/91 (47%), Positives = 52/91 (57%), Gaps = 18/91 (19%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSP 483
SP YL + + + SP S ++SP +SP+S P YSP+SP YSPTSP YSPTSP YSP
Sbjct: 74 SPKYLPT-SPKYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPTSPQYSP 128
Query: 484 TSP------------------GYSPTSPTYS 522
TSP +SPTSP YS
Sbjct: 129 TSPVPNNPSSPHYSPYAIASPKFSPTSPAYS 159
Score = 60.5 bits (145), Expect = 7e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +1
Query: 391 SPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+P+ +S SP YS TSP YSPTSP YSPTSP Y PTSP YSP
Sbjct: 42 NPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSP 86
[223][TOP]
>UniRef100_C6F0A4 RNA polymerase II (Fragment) n=2 Tax=Plasmodium (Laverania)
RepID=C6F0A4_PLAFA
Length = 202
Score = 77.4 bits (189), Expect = 6e-13
Identities = 43/76 (56%), Positives = 52/76 (68%)
Frame = +1
Query: 298 MMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGY 477
+MSP Y ++ + + SP S ++SP +SP YSP+SP YSPTSP YSPTSP Y
Sbjct: 35 VMSPVYSVT-SPKYSPTSP-KYSP----------TSPKYSPTSPKYSPTSPKYSPTSPKY 82
Query: 478 SPTSPGYSPTSPTYSP 525
SPTSP YSPTSP YSP
Sbjct: 83 SPTSPKYSPTSPKYSP 98
Score = 62.8 bits (151), Expect = 1e-08
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = +1
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+ SP YS TSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 33 YNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSP 70
Score = 62.0 bits (149), Expect = 2e-08
Identities = 41/84 (48%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPT------ 465
SP Y SP + ++SP +SP+S P YSP+SP YSPTSP YSPT
Sbjct: 51 SPKY--SPTSPKYSPTSPKYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPTSPVAQN 105
Query: 466 --SPGYSP---TSPGYSPTSPTYS 522
SP YSP TSP +SPTSP YS
Sbjct: 106 IASPNYSPYSITSPKFSPTSPAYS 129
[224][TOP]
>UniRef100_Q3SE61 DNA-directed RNA polymerase n=1 Tax=Paramecium tetraurelia
RepID=Q3SE61_PARTE
Length = 1751
Score = 77.0 bits (188), Expect = 7e-13
Identities = 70/206 (33%), Positives = 93/206 (45%), Gaps = 31/206 (15%)
Frame = +1
Query: 1 RHGINR-NDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELY 177
R+GINR + L + SFEETV+IL DAA ++E D +RG++ENI+ GQL P GTG EL
Sbjct: 1471 RNGINRIPEVSVLRKSSFEETVEILYDAAVFSEIDHMRGLSENIIFGQLCPHGTGCFELM 1530
Query: 178 LNDEMLKNAIELQLPS-----YMDGLEF----------GMTPARSPVSG----------- 279
+N KN E +L S + G E+ TP G
Sbjct: 1531 VN---AKNVKEFKLKSSHADKFTQGGEYLAEQSPYDQNQQTPLMLNTPGPGVSQGFIENS 1587
Query: 280 --TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSP--SSPGYSPTS 447
TPYH+ SP +P R + + SP+ P+ SP S G +
Sbjct: 1588 PYTPYHK---SPANFATPFGREYTPNSSHCSPFYPNTPLMPNDPYQLSPVGSDSGIQQSV 1644
Query: 448 PGYSPTSPGYSPTSPGYSPTSPTYSP 525
+ S +SP SP Y TS T SP
Sbjct: 1645 QKQANVSDSHSPGSPHY--TSHTNSP 1668
[225][TOP]
>UniRef100_C6F1F3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F3_9APIC
Length = 225
Score = 77.0 bits (188), Expect = 7e-13
Identities = 43/82 (52%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Frame = +1
Query: 298 MMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS------SPGYSPSSPGYSPTSPGYS 459
MM + ++SP ++ + SP +SP+S SP YSP+SP YSPTSP YS
Sbjct: 45 MMKYHSVVSPVYSVTSPKYSPTSP-----KYSPTSPKYLPTSPKYSPTSPKYSPTSPKYS 99
Query: 460 PTSPGYSPTSPGYSPTSPTYSP 525
PTSP YSPTSP YSPTSP YSP
Sbjct: 100 PTSPKYSPTSPKYSPTSPQYSP 121
Score = 70.9 bits (172), Expect = 5e-11
Identities = 42/80 (52%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
Frame = +1
Query: 286 YHEGMMSPNYLLSPNMRLSPMSDAQFSP----YVGGMAFSPSSSPGYSPSSPGYSPTSPG 453
YH ++SP Y ++ + + SP S ++SP Y+ +SP YSP+SP YSPTSP
Sbjct: 48 YHS-VVSPVYSVT-SPKYSPTSP-KYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPK 104
Query: 454 YSPTSPGYSPTSPGYSPTSP 513
YSPTSP YSPTSP YSPTSP
Sbjct: 105 YSPTSPKYSPTSPQYSPTSP 124
Score = 62.0 bits (149), Expect = 2e-08
Identities = 41/91 (45%), Positives = 49/91 (53%), Gaps = 18/91 (19%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSP 483
SP YL + + + SP S ++SP +SP YSP+SP YSPTSP YSPTSP YSP
Sbjct: 74 SPKYLPT-SPKYSPTSP-KYSP----------TSPKYSPTSPKYSPTSPKYSPTSPQYSP 121
Query: 484 TSP------------------GYSPTSPTYS 522
TSP +SPTSP YS
Sbjct: 122 TSPVPNNPSSPHYSPYAIASPKFSPTSPAYS 152
Score = 61.6 bits (148), Expect = 3e-08
Identities = 39/82 (47%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Frame = +1
Query: 304 SPNYLLSPNMRL---SPMSDAQF-----SPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYS 459
SP Y LS N S ++D + SP +P+ +S SP YS TSP YS
Sbjct: 5 SPTYHLSNNANAGGSSGLNDTKAFYSPTSPKNQLSEMNPNMMKYHSVVSPVYSVTSPKYS 64
Query: 460 PTSPGYSPTSPGYSPTSPTYSP 525
PTSP YSPTSP Y PTSP YSP
Sbjct: 65 PTSPKYSPTSPKYLPTSPKYSP 86
[226][TOP]
>UniRef100_C6F1F1 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F1_PLAVI
Length = 211
Score = 77.0 bits (188), Expect = 7e-13
Identities = 48/95 (50%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
Frame = +1
Query: 265 SPVSGTPYHEGMMSPNYLL---SPNMR-----LSPMSDAQFSPYVGGMAFSPSSSPGYSP 420
S ++GT + SP L +PNM +SP+ Y SP+S P YSP
Sbjct: 20 SGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKY------SPTS-PKYSP 72
Query: 421 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 73 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSP 107
Score = 66.2 bits (160), Expect = 1e-09
Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Frame = +1
Query: 286 YHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPT 465
YH ++SP Y ++ + + SP S ++SP +SP+S P YSP+SP YSPTSP YSPT
Sbjct: 48 YHS-VVSPVYSVT-SPKYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPT 101
Query: 466 SPGYSPTSP-GYSPTSPTYSP 525
SP YSP+SP +P+SP YSP
Sbjct: 102 SPQYSPSSPVPNNPSSPHYSP 122
[227][TOP]
>UniRef100_A0BYP5 DNA-directed RNA polymerase n=1 Tax=Paramecium tetraurelia
RepID=A0BYP5_PARTE
Length = 1750
Score = 77.0 bits (188), Expect = 7e-13
Identities = 70/206 (33%), Positives = 93/206 (45%), Gaps = 31/206 (15%)
Frame = +1
Query: 1 RHGINR-NDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELY 177
R+GINR + L + SFEETV+IL DAA ++E D +RG++ENI+ GQL P GTG EL
Sbjct: 1471 RNGINRIPEVSVLRKSSFEETVEILYDAAVFSEIDHMRGLSENIIFGQLCPHGTGCFELM 1530
Query: 178 LNDEMLKNAIELQLPS-----YMDGLEF----------GMTPARSPVSG----------- 279
+N KN E +L S + G E+ TP G
Sbjct: 1531 VN---AKNVKEFKLKSSHADKFTQGGEYLAEQSPYDQNQQTPLMLNTPGPGVSQGFIENS 1587
Query: 280 --TPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSP--SSPGYSPTS 447
TPYH+ SP +P R + + SP+ P+ SP S G +
Sbjct: 1588 PYTPYHK---SPANFATPFGREYTPNSSHCSPFYPNTPLMPNDPYQLSPVGSDSGIQQSV 1644
Query: 448 PGYSPTSPGYSPTSPGYSPTSPTYSP 525
+ S +SP SP Y TS T SP
Sbjct: 1645 QKQANVSDSHSPGSPHY--TSHTNSP 1668
[228][TOP]
>UniRef100_C6F0A3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0A3_PLAFA
Length = 195
Score = 76.6 bits (187), Expect = 1e-12
Identities = 36/46 (78%), Positives = 39/46 (84%)
Frame = +1
Query: 388 FSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 47 YSPTS-PKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 91
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = +1
Query: 400 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 43 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 84
Score = 71.6 bits (174), Expect = 3e-11
Identities = 33/41 (80%), Positives = 34/41 (82%)
Frame = +1
Query: 403 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YS +SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 37 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 77
Score = 70.9 bits (172), Expect = 5e-11
Identities = 40/72 (55%), Positives = 49/72 (68%)
Frame = +1
Query: 298 MMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGY 477
+MSP Y ++ + + SP S ++SP +SP YSP+SP YSPTSP YSPTSP Y
Sbjct: 35 VMSPVYSVT-SPKYSPTSP-KYSP----------TSPKYSPTSPKYSPTSPKYSPTSPKY 82
Query: 478 SPTSPGYSPTSP 513
SPTSP YSPTSP
Sbjct: 83 SPTSPKYSPTSP 94
Score = 62.8 bits (151), Expect = 1e-08
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = +1
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+ SP YS TSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 33 YNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSP 70
[229][TOP]
>UniRef100_Q584K3 DNA-directed RNA polymerase n=1 Tax=Trypanosoma brucei
RepID=Q584K3_9TRYP
Length = 1765
Score = 76.3 bits (186), Expect = 1e-12
Identities = 39/70 (55%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 RHGINRNDT-GPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELY 177
R GINR+DT GPLMRCSFEETV +L+ AA++ E D +RGV+ N++LG A +GTG +L
Sbjct: 1411 RSGINRSDTSGPLMRCSFEETVKVLMAAASFGECDPVRGVSANLVLGNQARVGTGLFDLV 1470
Query: 178 LNDEMLKNAI 207
LN L+ A+
Sbjct: 1471 LNMAALQQAV 1480
[230][TOP]
>UniRef100_Q57YU2 DNA-directed RNA polymerase n=1 Tax=Trypanosoma brucei
RepID=Q57YU2_9TRYP
Length = 1765
Score = 76.3 bits (186), Expect = 1e-12
Identities = 39/70 (55%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 RHGINRNDT-GPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELY 177
R GINR+DT GPLMRCSFEETV +L+ AA++ E D +RGV+ N++LG A +GTG +L
Sbjct: 1411 RSGINRSDTSGPLMRCSFEETVKVLMAAASFGECDPVRGVSANLVLGNQARVGTGLFDLV 1470
Query: 178 LNDEMLKNAI 207
LN L+ A+
Sbjct: 1471 LNMAALQQAV 1480
[231][TOP]
>UniRef100_Q26794 DNA-directed RNA polymerase n=1 Tax=Trypanosoma brucei
RepID=Q26794_9TRYP
Length = 1765
Score = 76.3 bits (186), Expect = 1e-12
Identities = 39/70 (55%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 RHGINRNDT-GPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELY 177
R GINR+DT GPLMRCSFEETV +L+ AA++ E D +RGV+ N++LG A +GTG +L
Sbjct: 1411 RSGINRSDTSGPLMRCSFEETVKVLMAAASFGECDPVRGVSANLVLGNQARVGTGLFDLV 1470
Query: 178 LNDEMLKNAI 207
LN L+ A+
Sbjct: 1471 LNMAALQQAV 1480
[232][TOP]
>UniRef100_C9ZMF2 RNA polymerase IIA largest subunit, putative n=3 Tax=Trypanosoma
brucei RepID=C9ZMF2_TRYBG
Length = 1765
Score = 76.3 bits (186), Expect = 1e-12
Identities = 39/70 (55%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 RHGINRNDT-GPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELY 177
R GINR+DT GPLMRCSFEETV +L+ AA++ E D +RGV+ N++LG A +GTG +L
Sbjct: 1411 RSGINRSDTSGPLMRCSFEETVKVLMAAASFGECDPVRGVSANLVLGNQARVGTGLFDLV 1470
Query: 178 LNDEMLKNAI 207
LN L+ A+
Sbjct: 1471 LNMAALQQAV 1480
[233][TOP]
>UniRef100_A4HJP9 DNA-directed RNA polymerase n=1 Tax=Leishmania braziliensis
RepID=A4HJP9_LEIBR
Length = 1662
Score = 76.3 bits (186), Expect = 1e-12
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 6/132 (4%)
Frame = +1
Query: 1 RHGINRNDT-GPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELY 177
R GINR++T GPLMRCSFEETV +L+ AAA+ E D +RGV+ N++LG A IGTG +L
Sbjct: 1385 RTGINRSETSGPLMRCSFEETVKVLMTAAAFGEKDPVRGVSANLVLGNQARIGTGLFDLM 1444
Query: 178 LNDEMLKNAIELQ-----LPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLS 342
L+ L++ + L S + + + P S + G PY E P + N L+
Sbjct: 1445 LDMSKLQHVVPLDKATEARTSNVYHTDTSVAPGSSTLQG-PYGE---LPPSTVHENSSLA 1500
Query: 343 PMSDAQFSPYVG 378
+ + + P+ G
Sbjct: 1501 AGTSSVYPPHRG 1512
[234][TOP]
>UniRef100_P17545 DNA-directed RNA polymerase II subunit RPB1-B n=1 Tax=Trypanosoma
brucei brucei RepID=RPB1B_TRYBB
Length = 1766
Score = 76.3 bits (186), Expect = 1e-12
Identities = 39/70 (55%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 RHGINRNDT-GPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELY 177
R GINR+DT GPLMRCSFEETV +L+ AA++ E D +RGV+ N++LG A +GTG +L
Sbjct: 1412 RSGINRSDTSGPLMRCSFEETVKVLMAAASFGECDPVRGVSANLVLGNQARVGTGLFDLV 1471
Query: 178 LNDEMLKNAI 207
LN L+ A+
Sbjct: 1472 LNMAALQQAV 1481
[235][TOP]
>UniRef100_P17546 DNA-directed RNA polymerase II subunit RPB1-A n=1 Tax=Trypanosoma
brucei brucei RepID=RPB1A_TRYBB
Length = 1766
Score = 76.3 bits (186), Expect = 1e-12
Identities = 39/70 (55%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 RHGINRNDT-GPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELY 177
R GINR+DT GPLMRCSFEETV +L+ AA++ E D +RGV+ N++LG A +GTG +L
Sbjct: 1412 RSGINRSDTSGPLMRCSFEETVKVLMAAASFGECDPVRGVSANLVLGNQARVGTGLFDLV 1471
Query: 178 LNDEMLKNAI 207
LN L+ A+
Sbjct: 1472 LNMAALQQAV 1481
[236][TOP]
>UniRef100_C6F1F6 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F6_PLAVI
Length = 211
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = +1
Query: 400 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 66 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSP 107
Score = 72.8 bits (177), Expect = 1e-11
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = +1
Query: 400 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP SP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 59 TSPKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 100
Score = 70.5 bits (171), Expect = 7e-11
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Frame = +1
Query: 265 SPVSGT----PYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
SP S T + MM + ++SP ++ + SP +SP+S P YSP+SP
Sbjct: 30 SPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKXSPTSP-----KYSPTS-PKYSPTSPK 83
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSP 513
YSPTSP YSPTSP YSPTSP YSP+SP
Sbjct: 84 YSPTSPKYSPTSPKYSPTSPQYSPSSP 110
Score = 68.9 bits (167), Expect = 2e-10
Identities = 33/48 (68%), Positives = 35/48 (72%)
Frame = +1
Query: 382 MAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
M + SP YS +SP SPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 46 MKYHSVVSPVYSVTSPKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 93
Score = 62.4 bits (150), Expect = 2e-08
Identities = 43/97 (44%), Positives = 56/97 (57%), Gaps = 18/97 (18%)
Frame = +1
Query: 286 YHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPT 465
YH ++SP Y ++ + + SP S ++SP +SP+S P YSP+SP YSPTSP YSPT
Sbjct: 48 YHS-VVSPVYSVT-SPKXSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPT 101
Query: 466 SPGYSPTSP------------------GYSPTSPTYS 522
SP YSP+SP +SPTSP YS
Sbjct: 102 SPQYSPSSPVPNNPSSPHYSPYAIASPKFSPTSPAYS 138
Score = 59.7 bits (143), Expect = 1e-07
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +1
Query: 391 SPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+P+ +S SP YS TSP SPTSP YSPTSP YSPTSP YSP
Sbjct: 42 NPNMMKYHSVVSPVYSVTSPKXSPTSPKYSPTSPKYSPTSPKYSP 86
[237][TOP]
>UniRef100_C6F1F5 RNA polymerase II (Fragment) n=1 Tax=Plasmodium fragile
RepID=C6F1F5_PLAFR
Length = 210
Score = 75.9 bits (185), Expect = 2e-12
Identities = 46/87 (52%), Positives = 54/87 (62%)
Frame = +1
Query: 265 SPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPT 444
SP S T G M+PN ++ + +SP+ Y SP+S P YSP+SP Y PT
Sbjct: 30 SPTSPTN-QLGEMNPN-MMKYHSVVSPVYSVTSPKY------SPTS-PKYSPTSPQYMPT 80
Query: 445 SPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 81 SPKYSPTSPKYSPTSPKYSPTSPQYSP 107
Score = 59.3 bits (142), Expect = 2e-07
Identities = 42/93 (45%), Positives = 51/93 (54%), Gaps = 14/93 (15%)
Frame = +1
Query: 286 YHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS---SSPGYSPSSPGYSPTSPGY 456
YH ++SP Y ++ + + SP S M SP +SP YSP+SP YSPTSP Y
Sbjct: 48 YHS-VVSPVYSVT-SPKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQY 105
Query: 457 SPT--------SPGYSP---TSPGYSPTSPTYS 522
SPT SP YSP SP +SPTSP YS
Sbjct: 106 SPTSPIPNNPSSPHYSPYAIASPKFSPTSPAYS 138
[238][TOP]
>UniRef100_C6F0B0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0B0_PLAFA
Length = 188
Score = 75.9 bits (185), Expect = 2e-12
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = +1
Query: 400 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 43 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 84
Score = 71.6 bits (174), Expect = 3e-11
Identities = 33/41 (80%), Positives = 34/41 (82%)
Frame = +1
Query: 403 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP YS +SP YSPTSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 37 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 77
Score = 70.1 bits (170), Expect = 9e-11
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +1
Query: 388 FSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP 513
+SP+S P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP
Sbjct: 47 YSPTS-PKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 87
Score = 63.5 bits (153), Expect = 8e-09
Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 11/86 (12%)
Frame = +1
Query: 298 MMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSP-- 471
+MSP Y ++ + + SP S ++SP +SP+S P YSP+SP YSPTSP YSPTSP
Sbjct: 35 VMSPVYSVT-SPKYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPTSPVA 89
Query: 472 ------GYSP---TSPGYSPTSPTYS 522
YSP TSP +SPTSP YS
Sbjct: 90 QNIASPNYSPYSITSPKFSPTSPAYS 115
Score = 62.8 bits (151), Expect = 1e-08
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = +1
Query: 412 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
Y+ SP YS TSP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 33 YNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSP 70
[239][TOP]
>UniRef100_A2DKT1 DNA-directed RNA polymerase n=1 Tax=Trichomonas vaginalis G3
RepID=A2DKT1_TRIVA
Length = 1661
Score = 75.5 bits (184), Expect = 2e-12
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 9/182 (4%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGIN+ TG LMR S+E T D+ DAA ++E D +R V+ NI+ G+ + GTG E+ +
Sbjct: 1403 RHGINKTPTGTLMRASYEMTNDVFFDAAVFSEIDYMRDVSSNIIAGKPSRAGTGIVEVLI 1462
Query: 181 NDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQ 360
N+++ L + +G E + PA + +P +G +S + +++ + P +D
Sbjct: 1463 NEDL------LPMTKGNNGGEDLIGPATPSMMISPVPQGYVSQDNIVTSPFQDMPTNDIV 1516
Query: 361 FSPY---------VGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP 513
SP + G A SP SP G + YS T P SP
Sbjct: 1517 QSPMSPVSPIESPLNGGALSPMLMDAQSPYLYGAENAASPIMTYKQNYSITMP-----SP 1571
Query: 514 TY 519
+Y
Sbjct: 1572 SY 1573
[240][TOP]
>UniRef100_Q95W43 DNA-directed RNA polymerase n=1 Tax=Trypanosoma cruzi
RepID=Q95W43_TRYCR
Length = 1731
Score = 75.1 bits (183), Expect = 3e-12
Identities = 44/100 (44%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Frame = +1
Query: 1 RHGINRND-TGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELY 177
R GINR++ +GPLMRCSFEETV +L+ AAA+ E D +RGV+ N++LG A IGTG +L
Sbjct: 1395 RVGINRSEMSGPLMRCSFEETVKVLMAAAAFGERDPVRGVSANLVLGNQARIGTGLFDLV 1454
Query: 178 LNDEMLKNAI---ELQLPSYMDGLEFGMTPARSPVSGTPY 288
LN L+ A+ + P + G+ ++ S PY
Sbjct: 1455 LNMAALQQAVPQEDAVAPGKEVNVYHGLASTQNLPSSMPY 1494
[241][TOP]
>UniRef100_Q8ISB0 DNA-directed RNA polymerase n=1 Tax=Trypanosoma cruzi
RepID=Q8ISB0_TRYCR
Length = 1731
Score = 75.1 bits (183), Expect = 3e-12
Identities = 44/100 (44%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Frame = +1
Query: 1 RHGINRND-TGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELY 177
R GINR++ +GPLMRCSFEETV +L+ AAA+ E D +RGV+ N++LG A IGTG +L
Sbjct: 1395 RVGINRSEMSGPLMRCSFEETVKVLMAAAAFGERDPVRGVSANLVLGNQARIGTGLFDLV 1454
Query: 178 LNDEMLKNAI---ELQLPSYMDGLEFGMTPARSPVSGTPY 288
LN L+ A+ + P + G+ ++ S PY
Sbjct: 1455 LNMAALQQAVPQEDAVAPGKEVNVYHGLASTQNLPSSMPY 1494
[242][TOP]
>UniRef100_Q54LJ4 Type A von Willebrand factor domain-containing protein n=1
Tax=Dictyostelium discoideum RepID=Q54LJ4_DICDI
Length = 2563
Score = 75.1 bits (183), Expect = 3e-12
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = +1
Query: 388 FSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
+SP+S P Y P+SP YSPTSP YSPTSP YSPTSP YSPTSP+YS
Sbjct: 1846 YSPTS-PFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1889
Score = 73.6 bits (179), Expect = 8e-12
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = +1
Query: 388 FSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
F +S P YSP+SP Y PTSP YSPTSP YSPTSP YSPTSP+YSP
Sbjct: 1839 FFQASQP-YSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1883
Score = 70.9 bits (172), Expect = 5e-11
Identities = 34/52 (65%), Positives = 37/52 (71%)
Frame = +1
Query: 367 PYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
PY F +SP YSP+SP YSPTSP YSPTSP YSPTSP YS TSP Y+
Sbjct: 1845 PYSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-TSPLYA 1895
Score = 63.2 bits (152), Expect = 1e-08
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +1
Query: 259 ARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGY 435
A P S T SP+Y SP+ + S + SP + S S+SP Y+ +S Y
Sbjct: 1842 ASQPYSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSY 1901
Query: 436 SPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 525
SP SP Y+PTS Y+PT P YSP SP+Y+P
Sbjct: 1902 SPVSPSYTPTSLLYAPTIPSYSPVSPSYAP 1931
Score = 61.2 bits (147), Expect = 4e-08
Identities = 34/77 (44%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSP---SSSPGYSPSSPGYSPTSPGYSPTSPG 474
SP+Y SP + +SP + SP S+S YSP SP Y+PTS Y+PT P
Sbjct: 1864 SPSY--SPTSPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSPSYTPTSLLYAPTIPS 1921
Query: 475 YSPTSPGYSPTSPTYSP 525
YSP SP Y+PT P+ P
Sbjct: 1922 YSPVSPSYAPTKPSKLP 1938
Score = 55.5 bits (132), Expect = 2e-06
Identities = 33/90 (36%), Positives = 49/90 (54%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPG 432
+P+ SP S + SP+Y SP + S + SP +++P+S Y+P+ P
Sbjct: 1871 SPSYSPTSPS---YSPTSPSYSTSPLYASTSQSYSPVSP-----SYTPTSLL-YAPTIPS 1921
Query: 433 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 522
YSP SP Y+PT P P YSP+SP++S
Sbjct: 1922 YSPVSPSYAPTKPSKLPVLTSYSPSSPSFS 1951
[243][TOP]
>UniRef100_Q4DDX5 DNA-directed RNA polymerase n=1 Tax=Trypanosoma cruzi
RepID=Q4DDX5_TRYCR
Length = 1731
Score = 75.1 bits (183), Expect = 3e-12
Identities = 44/100 (44%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Frame = +1
Query: 1 RHGINRND-TGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELY 177
R GINR++ +GPLMRCSFEETV +L+ AAA+ E D +RGV+ N++LG A IGTG +L
Sbjct: 1395 RVGINRSEMSGPLMRCSFEETVKVLMAAAAFGERDPVRGVSANLVLGNQARIGTGLFDLV 1454
Query: 178 LNDEMLKNAI---ELQLPSYMDGLEFGMTPARSPVSGTPY 288
LN L+ A+ + P + G+ ++ S PY
Sbjct: 1455 LNMAALQQAVPQEDAVAPGKEVNVYHGLASTQNLPSSMPY 1494
[244][TOP]
>UniRef100_Q4CPY8 RNA polymerase IIA largest subunit, putative (Fragment) n=1
Tax=Trypanosoma cruzi RepID=Q4CPY8_TRYCR
Length = 452
Score = 75.1 bits (183), Expect = 3e-12
Identities = 44/100 (44%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Frame = +1
Query: 1 RHGINRND-TGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELY 177
R GINR++ +GPLMRCSFEETV +L+ AAA+ E D +RGV+ N++LG A IGTG +L
Sbjct: 115 RVGINRSEMSGPLMRCSFEETVKVLMAAAAFGERDPVRGVSANLVLGNQARIGTGLFDLV 174
Query: 178 LNDEMLKNAI---ELQLPSYMDGLEFGMTPARSPVSGTPY 288
LN L+ A+ + P + G+ ++ S PY
Sbjct: 175 LNMAALQQAVPQEDAVAPGKEVNVYHGLASTQNLPSSMPY 214
[245][TOP]
>UniRef100_Q6ZJR1 DNA-directed RNA polymerase largest chain-like protein n=1
Tax=Oryza sativa Japonica Group RepID=Q6ZJR1_ORYSJ
Length = 138
Score = 74.7 bits (182), Expect = 4e-12
Identities = 47/92 (51%), Positives = 51/92 (55%), Gaps = 18/92 (19%)
Frame = +1
Query: 304 SPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPSS---------SPGYSPSSPGYSPTSPGY 456
SPNY SP S A++SP A+SPSS SP YSP+SP YSPTSP Y
Sbjct: 19 SPNY--SPTSPSYNPSSAKYSP---SHAYSPSSPRLSPYSQTSPNYSPTSPTYSPTSPSY 73
Query: 457 SPTSPGYSPT---------SPGYSPTSPTYSP 525
S SP YSPT SP YSPTSP YSP
Sbjct: 74 SQPSPSYSPTSPYTTSGGPSPDYSPTSPNYSP 105
Score = 64.7 bits (156), Expect = 4e-09
Identities = 45/90 (50%), Positives = 52/90 (57%), Gaps = 16/90 (17%)
Frame = +1
Query: 304 SPNYLLSPNM-RLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSP--- 471
SP++ SP+ RLSP S Q SP +SP+S P YSP+SP YS SP YSPTSP
Sbjct: 37 SPSHAYSPSSPRLSPYS--QTSPN-----YSPTS-PTYSPTSPSYSQPSPSYSPTSPYTT 88
Query: 472 ------GYSPTSP------GYSPTSPTYSP 525
YSPTSP YSPT+P YSP
Sbjct: 89 SGGPSPDYSPTSPNYSPSGSYSPTAPGYSP 118
Score = 60.1 bits (144), Expect = 9e-08
Identities = 30/57 (52%), Positives = 35/57 (61%), Gaps = 16/57 (28%)
Frame = +1
Query: 400 SSPGYSPSSPGYSPTSPGYSP----------------TSPGYSPTSPGYSPTSPTYS 522
+SP YSP+SP Y+P+S YSP TSP YSPTSP YSPTSP+YS
Sbjct: 18 TSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRLSPYSQTSPNYSPTSPTYSPTSPSYS 74
Score = 57.0 bits (136), Expect = 8e-07
Identities = 39/87 (44%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = +1
Query: 253 TPARSPVSGTPYHEGMMSPNYL-LSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSP 429
+P SP S T + SP Y SP+ S + SPY S SP YSP+SP
Sbjct: 46 SPRLSPYSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTT----SGGPSPDYSPTSP 101
Query: 430 GYSPTSPGYSPTSPGYSPTSPG--YSP 504
YSP S YSPT+PGYSP+S G +SP
Sbjct: 102 NYSP-SGSYSPTAPGYSPSSTGQQFSP 127
Score = 56.2 bits (134), Expect = 1e-06
Identities = 28/52 (53%), Positives = 31/52 (59%), Gaps = 16/52 (30%)
Frame = +1
Query: 418 PSSPGYSPTSPGYSPTSPGYSP----------------TSPGYSPTSPTYSP 525
P+SP YSPTSP Y+P+S YSP TSP YSPTSPTYSP
Sbjct: 17 PTSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRLSPYSQTSPNYSPTSPTYSP 68
[246][TOP]
>UniRef100_Q27095 DNA-directed RNA polymerase n=1 Tax=Trichomonas vaginalis
RepID=Q27095_TRIVA
Length = 1661
Score = 74.7 bits (182), Expect = 4e-12
Identities = 74/258 (28%), Positives = 108/258 (41%), Gaps = 83/258 (32%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGIN+ TG LMR S+E T D+ DAA ++E D +R V+ NI+ G+ + GTG E+ +
Sbjct: 1403 RHGINKTPTGTLMRASYEMTNDVFFDAAVFSEIDYMRDVSSNIIAGKPSRAGTGIVEVLI 1462
Query: 181 NDEML---------KNAIELQLPSYM-------------------------DGLEFGMTP 258
N+++L ++ I PS M D ++ M+P
Sbjct: 1463 NEDLLPMTKGNNGGEDLIGPATPSMMISPVPQGYVSQDNIVTSPFQDMLTNDIVQSPMSP 1522
Query: 259 A---RSPVSG-----------TPYHEG------------------MMSPNYLLSPNMRLS 342
SP++G +PY G M SP+Y + + +
Sbjct: 1523 VSPIESPLNGGALSPMLMDAQSPYLYGAENAASPIMTYKQNYSITMPSPSYQGNAQLLNT 1582
Query: 343 PMSDAQFSPYVGGMAFSPSS-SPGYSPSSPG--YSPT--SPG-------YSPTSP----- 471
++D +SP SP + SP SP Y PT SP Y+P SP
Sbjct: 1583 TITDHAYSPIAAASPLSPQAMGQSMSPLSPAQQYDPTNFSPAGGFFNTRYNPLSPQTRPM 1642
Query: 472 GYSPTSPGYSPTSPTYSP 525
YSP + +P SPTY P
Sbjct: 1643 TYSPNND--TPYSPTYEP 1658
[247][TOP]
>UniRef100_A9BLB7 DNA-directed RNA polymerase n=1 Tax=Cryptophyta RepID=A9BLB7_9CRYP
Length = 1464
Score = 73.9 bits (180), Expect = 6e-12
Identities = 31/60 (51%), Positives = 47/60 (78%)
Frame = +1
Query: 1 RHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYL 180
RHGINR D GP+ +CSFEET+++L AAA+ D L+GV+ +I++GQ++ +GTG +L+L
Sbjct: 1400 RHGINRTDIGPIAKCSFEETIEVLYQAAAFGVCDNLKGVSGSILVGQVSSLGTGKIDLFL 1459
[248][TOP]
>UniRef100_UPI00006CF1E9 RNA polymerase Rpb1, domain 2 family protein n=1 Tax=Tetrahymena
thermophila RepID=UPI00006CF1E9
Length = 1759
Score = 73.6 bits (179), Expect = 8e-12
Identities = 67/203 (33%), Positives = 91/203 (44%), Gaps = 30/203 (14%)
Frame = +1
Query: 1 RHGINR-NDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCEL- 174
R+GINR L + SFEETVDIL AA + E D L+GVTENI+ GQ IGTG +L
Sbjct: 1472 RNGINRIPGLSCLRKSSFEETVDILNTAAIFFEKDDLKGVTENIIFGQNCDIGTGCFDLL 1531
Query: 175 --------YLNDEMLKNAIELQLPSYMDGLEFGMTPARSPVSG------------TPYHE 294
+ ++ +E++ S + + TP+ G T H
Sbjct: 1532 VDLNKVGEFKTKRQVEQTLEMEDYSENESSRYENTPSHFQTPGPGLVSAYPNSIRTVQHA 1591
Query: 295 GMMSPN--YLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSP--TSPGYSP 462
G +P YL SP +S +P ++ + S YSP + SP SP YSP
Sbjct: 1592 GSFTPTTPYLNSPGYNMS-------TPISYSNTYNQTRSSQYSPQTGNNSPFVPSPNYSP 1644
Query: 463 TS--PGYSPTSPGYSP--TSPTY 519
S P S + SP +SP Y
Sbjct: 1645 PSHTPAGSTSPANASPYASSPQY 1667
[249][TOP]
>UniRef100_UPI00004C0623 PREDICTED: similar to zinc finger protein 239 (predicted) isoform 1
n=1 Tax=Canis lupus familiaris RepID=UPI00004C0623
Length = 554
Score = 73.2 bits (178), Expect = 1e-11
Identities = 51/131 (38%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Frame = +1
Query: 154 GTGDCELYLNDEMLKNAIELQLPSY---MDGLEFGMTPARSPVSGTPYHE----GMMSPN 312
GTGD E+ E + ++ Q P + G E +P P S P E G + P+
Sbjct: 45 GTGDYEV----EEIPFGLDPQSPGFEPQSPGFE-SQSPRFEPES--PGFESRSPGFVPPS 97
Query: 313 YLLSPNMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSP 492
+P SP SD+Q + SPGY P SPGY P SPGY P SPGY P SP
Sbjct: 98 PEFAPR---SPDSDSQSPEFEPQSPRYEPQSPGYEPRSPGYEPKSPGYEPKSPGYEPRSP 154
Query: 493 GYSPTSPTYSP 525
GY SP Y P
Sbjct: 155 GYESQSPGYEP 165
[250][TOP]
>UniRef100_Q9NJR9 DNA-directed RNA polymerase n=1 Tax=Leishmania donovani
RepID=Q9NJR9_LEIDO
Length = 1665
Score = 72.8 bits (177), Expect = 1e-11
Identities = 38/72 (52%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 RHGINRNDT-GPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELY 177
R GINR++T GPLMRCSFEETV +L+ AAA+ E D +RGV+ +++LG A IGTG +L
Sbjct: 1386 RTGINRSETSGPLMRCSFEETVKVLMTAAAFGEKDPVRGVSASLVLGNQARIGTGLFDLL 1445
Query: 178 LNDEMLKNAIEL 213
L+ L++ + L
Sbjct: 1446 LDMSKLQHVVPL 1457