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[1][TOP]
>UniRef100_Q9ZQM0 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=Q9ZQM0_ARATH
Length = 1044
Score = 175 bits (443), Expect = 2e-42
Identities = 83/83 (100%), Positives = 83/83 (100%)
Frame = -2
Query: 540 LSWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGS 361
LSWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGS
Sbjct: 695 LSWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGS 754
Query: 360 GLDTLVWNEPWLSLSTSSTPMGP 292
GLDTLVWNEPWLSLSTSSTPMGP
Sbjct: 755 GLDTLVWNEPWLSLSTSSTPMGP 777
[2][TOP]
>UniRef100_Q9SZ87 RNA-directed DNA polymerase-like protein n=1 Tax=Arabidopsis thaliana
RepID=Q9SZ87_ARATH
Length = 1274
Score = 159 bits (403), Expect = 9e-38
Identities = 96/236 (40%), Positives = 115/236 (48%), Gaps = 56/236 (23%)
Frame = -2
Query: 540 LSWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAA-SSHGWRGICTGKDLIKSQLGKVIG 364
LSWRI++ P +L R+LLGKYC TSSF+DCS + + +SHGWRGI G+DL++ LG IG
Sbjct: 803 LSWRILKEPHSLLSRVLLGKYCNTSSFMDCSASPSFASHGWRGILAGRDLLRKGLGWSIG 862
Query: 363 SGLDTLVWNEPWLSLSTSSTPMGP--NKTRDYSV-------------------------- 268
G VW E WLS S+ TP+GP +D SV
Sbjct: 863 QGDSINVWTEAWLSPSSPQTPIGPPTETNKDLSVHDLICHDVKSWNVEAIRKHLPQYEDQ 922
Query: 267 ---------------------------KTGYHAADALSHQGTQLEEPPLDFN*NKEIWTK 169
KTGY A S +Q LDFN K IW
Sbjct: 923 IRKITINALPLQDSLVWLPVKSGEYTTKTGYALAKLNSFPASQ-----LDFNWQKNIWKI 977
Query: 168 HCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCDEAESILHLLFLCPFASK 1
H PK+K FLWKAMK ALPVGE L R I C C + ES LHL+ LCP+A K
Sbjct: 978 HTSPKVKHFLWKAMKGALPVGEALSRRNIEAEVTCKRCGQTESSLHLMLLCPYAKK 1033
[3][TOP]
>UniRef100_Q9ASV1 At1g09870 n=1 Tax=Arabidopsis thaliana RepID=Q9ASV1_ARATH
Length = 201
Score = 131 bits (330), Expect = 3e-29
Identities = 64/140 (45%), Positives = 91/140 (65%), Gaps = 19/140 (13%)
Frame = -2
Query: 540 LSWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGS 361
+SWR++ PS +L ++LLGKYC++SSFLDC V+ +SHGWRGIC G+DL+K+QLG+ IG+
Sbjct: 35 VSWRLLTKPSSMLAKVLLGKYCQSSSFLDCKVSNNASHGWRGICLGRDLLKTQLGRAIGT 94
Query: 360 GLDTLVWNEPWLSLSTSSTPMGP-------------------NKTRDYSVKTGYHAADAL 238
G D+ +W EPW+SLS TPMGP +K+ +YS KTGY A+ L
Sbjct: 95 GKDSKIWQEPWISLSKPVTPMGPATQFSQELTVADLICPSSNSKSGEYSAKTGYLVAN-L 153
Query: 237 SHQGTQLEEPPLDFN*NKEI 178
+ L P ++F+ +EI
Sbjct: 154 REERPLLNPPVVEFDWLREI 173
[4][TOP]
>UniRef100_Q0WPC4 Putative uncharacterized protein n=1 Tax=Arabidopsis thaliana
RepID=Q0WPC4_ARATH
Length = 61
Score = 129 bits (325), Expect = 1e-28
Identities = 61/61 (100%), Positives = 61/61 (100%)
Frame = +3
Query: 12 MGRGKADGELIQPRRSEDREQADLYHAASGFHQLGEHSSWLSRGKFSILGGSVWSISPYF 191
MGRGKADGELIQPRRSEDREQADLYHAASGFHQLGEHSSWLSRGKFSILGGSVWSISPYF
Sbjct: 1 MGRGKADGELIQPRRSEDREQADLYHAASGFHQLGEHSSWLSRGKFSILGGSVWSISPYF 60
Query: 192 S 194
S
Sbjct: 61 S 61
[5][TOP]
>UniRef100_Q9FJA4 Non-LTR retroelement reverse transcriptase-like protein n=1
Tax=Arabidopsis thaliana RepID=Q9FJA4_ARATH
Length = 1197
Score = 129 bits (323), Expect = 2e-28
Identities = 75/234 (32%), Positives = 103/234 (44%), Gaps = 55/234 (23%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
SWR++ PSC+L R+LLGKYC+ SFL +SHGWR + G+DL++ QLG IG+
Sbjct: 700 SWRVLPHPSCLLARVLLGKYCQNESFLKALSPTFASHGWRDLLAGRDLLRKQLGWTIGND 759
Query: 357 LDTLVWNEPWLSLSTSSTPMGPNK--TRDYSVK--------------------------- 265
LVW + WL+ P+GP ++D+ VK
Sbjct: 760 KSVLVWQDAWLAHDKRIQPVGPAPLLSKDWKVKDLFLPNSVDWDEGKIEAAIPFVKDLVL 819
Query: 264 --------------------------TGYHAADALSHQGTQLEEPPLDFN*NKEIWTKHC 163
TGY A +P L FN E+W C
Sbjct: 820 AIRPSRAGGADKRIWLGAKDGLYTTKTGYKAT-LCDVDSDSSRDPVLSFNWFDEVWNVQC 878
Query: 162 PPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCDEAESILHLLFLCPFASK 1
PK+++FLWKA+ ALPVG L +R + +C C E E+ H LF C F +
Sbjct: 879 SPKIRLFLWKAVSGALPVGSQLAIRIPSFDPVCCRCGELETSSHALFNCMFVQR 932
[6][TOP]
>UniRef100_Q9C697 Reverse transcriptase, putative; 16838-20266 n=1 Tax=Arabidopsis
thaliana RepID=Q9C697_ARATH
Length = 1142
Score = 103 bits (258), Expect = 6e-21
Identities = 70/230 (30%), Positives = 100/230 (43%), Gaps = 57/230 (24%)
Frame = -2
Query: 534 WRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGL 355
WR++ +P + ++ G+Y R S+ LD + + S+GWR + + + L+ L K +GSG
Sbjct: 655 WRLITAPDSLFAKVFKGRYFRKSNPLDSIKSYSPSYGWRSMISARSLVYKGLIKRVGSGA 714
Query: 354 DTLVWNEPWLSLS---------------------------------------------TS 310
VWN+PW+ S
Sbjct: 715 SISVWNDPWIPAQFPRPAKYGGSIVDPSLKVKSLIDSRSNFWNIDLLKELFDPEDVPLIS 774
Query: 309 STPMG-PN----------KTRDYSVKTGYHAADALSHQGTQLEEPPLDFN*NKEIWTKHC 163
+ P+G PN K +Y+VK+GYH A ++GT L P L IW C
Sbjct: 775 ALPIGNPNMEDTLGWHFTKAGNYTVKSGYHTARLDLNEGTTLIGPDLT-TLKAYIWKVQC 833
Query: 162 PPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCDEA-ESILHLLFLC 16
PPKL+ FLW+ + +PV ENLR RGI C C + ESI H LF C
Sbjct: 834 PPKLRHFLWQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHTLFQC 883
[7][TOP]
>UniRef100_Q9SJ38 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=Q9SJ38_ARATH
Length = 1229
Score = 98.2 bits (243), Expect = 3e-19
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = -2
Query: 540 LSWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGS 361
L WR++ SP +L RILLGKYC +SSF++C + + SHGWR I G++++K LG +I +
Sbjct: 764 LGWRLLNSPESLLSRILLGKYCHSSSFMECKLPSQPSHGWRSIIAGREILKEGLGWLITN 823
Query: 360 GLDTLVWNEPWLSLSTSSTPMGP 292
G +WN+PWLS+S P+GP
Sbjct: 824 GEKVSIWNDPWLSISKPLVPIGP 846
Score = 68.6 bits (166), Expect = 3e-10
Identities = 46/134 (34%), Positives = 60/134 (44%)
Frame = -2
Query: 402 KDLIKSQLGKVIGSGLDTLVWNEPWLSLSTSSTPMGPNKTRDYSVKTGYHAADALSHQGT 223
++LIK QL G+D L W P K+ Y+ ++GY A S
Sbjct: 880 ENLIK-QLPAPSSRGVDKLAWL--------------PVKSGQYTSRSGYGIASVAS---- 920
Query: 222 QLEEPPLDFN*NKEIWTKHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCDEAE 43
+ P FN +W PK+K +WKA ALPVG L R I+P A C C E
Sbjct: 921 -IPIPQTQFNWQSNLWKLQTLPKIKHLMWKAAMEALPVGIQLVRRHISPSAACHRCGAPE 979
Query: 42 SILHLLFLCPFASK 1
S HL F C FA++
Sbjct: 980 STTHLFFHCEFAAQ 993
[8][TOP]
>UniRef100_C7J4L5 Os07g0501200 protein n=1 Tax=Oryza sativa Japonica Group
RepID=C7J4L5_ORYSJ
Length = 620
Score = 88.6 bits (218), Expect = 3e-16
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 56/234 (23%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WRI+ + + + R+L KY S +D S SS GW+GI G +L+K + +G+G
Sbjct: 111 AWRILDNLNSLCARVLKAKYFPNGSIIDTSFGGNSSPGWKGIEYGLELLKKGIIWRVGNG 170
Query: 357 LDTLVWNEPWLSLSTSSTP----------------------------------------- 301
+W +PWL S P
Sbjct: 171 HSIRIWRDPWLPRDFSRRPITRKGNCRIKWVPDLLNDNGEWDLERIQQHFNQIDTDIILK 230
Query: 300 MGPNKTRD-------------YSVKTGYHAADALSHQGTQLEEPPLDFN*N-KEIWTKHC 163
+ P+++++ +SV++ YH A +L++ + D + K +W +
Sbjct: 231 IRPSRSQEADFVAWHPDKHGIFSVRSAYHLAVSLANVNSSSSSSGHDLSKAWKLVWNCNI 290
Query: 162 PPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCD-EAESILHLLFLCPFAS 4
P K+KIF WKA N+L +N + R + P+A+C C E E + H L CP A+
Sbjct: 291 PQKVKIFAWKAATNSLATLQNKKTRRLEPMAICSICGREEEDVAHALCRCPHAT 344
[9][TOP]
>UniRef100_Q9ZQF8 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=Q9ZQF8_ARATH
Length = 1225
Score = 84.3 bits (207), Expect = 5e-15
Identities = 66/232 (28%), Positives = 91/232 (39%), Gaps = 58/232 (25%)
Frame = -2
Query: 534 WRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGL 355
WR+++ P+ +L R+L G+Y R S + S GWR I K L+ S L + IGSG+
Sbjct: 751 WRLIRFPNSLLSRVLRGRYFRYSDPIQIGKANRPSFGWRSIMAAKPLLLSGLRRTIGSGM 810
Query: 354 DTLVWNEPWLS---------------------------------------LSTSSTP--M 298
T VW +PW+ + S P +
Sbjct: 811 LTRVWEDPWIPSFPPRPAKSILNIRDTHLYVNDLIDPVTKQWKLGRLQELVDPSDIPLIL 870
Query: 297 GPNKTRDY---------------SVKTGYHAADALSHQGTQLE-EPPLDFN*NKEIWTKH 166
G +R Y +VK+GY AA LS L + P ++W
Sbjct: 871 GIRPSRTYKSDDFSWSFTKSGNYTVKSGYWAARDLSRPTCDLPFQGPSVSALQAQVWKIK 930
Query: 165 CPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCD-EAESILHLLFLCP 13
K K F W+ + L + L R I +CP C E ESI HLLFLCP
Sbjct: 931 TTRKFKHFEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCP 982
[10][TOP]
>UniRef100_B8AFP4 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AFP4_ORYSI
Length = 556
Score = 84.3 bits (207), Expect = 5e-15
Identities = 63/236 (26%), Positives = 94/236 (39%), Gaps = 59/236 (25%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ P + RIL KY S +D S +S GWR I G +L+K + IG+G
Sbjct: 277 AWRLLDRPDSLCARILKAKYYPNGSLIDTSFGGNASPGWRAIEYGLELLKKGIIWRIGNG 336
Query: 357 LDTLVWNEPWL---------------------------------SLSTSSTPMG------ 295
+W +PW+ +S PM
Sbjct: 337 KSVRLWRDPWIPRSFSRRPISAKRNCRLRWVSDLIDQSESWDTDKISQHFLPMDAEAILN 396
Query: 294 ---------------PNKTRDYSVKTGYHAADALSHQGTQLEEPPLDFN*NKEIWTK--- 169
P++ +SV++ YH A AL+ E N N W
Sbjct: 397 IRLSSRLEDDFIAWHPDRLGRFSVRSAYHLAIALAQVD---EGSSSSGNGNSRAWNALWK 453
Query: 168 -HCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCD-EAESILHLLFLCPFA 7
+ P K+KIF W+A+ N+LP EN + R + +C C E+E ++H LF CP A
Sbjct: 454 CNAPQKVKIFAWRAITNSLPTLENKKKRKLEVSDICTICGVESEYVVHALFRCPHA 509
[11][TOP]
>UniRef100_Q9SHP2 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=Q9SHP2_ARATH
Length = 773
Score = 84.0 bits (206), Expect = 6e-15
Identities = 64/232 (27%), Positives = 88/232 (37%), Gaps = 58/232 (25%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
SWRI+Q P ++ R+ KY LD T+ SS+ W+ I G LI L + G+G
Sbjct: 325 SWRILQQPFSLMARVFKAKYFPKERLLDAKATSQSSYAWKSILHGTKLISRGLKYIAGNG 384
Query: 357 LDTLVW-------NEPWLSLSTSSTPMGPNKTRD-------------------------- 277
+ +W N P + T + K D
Sbjct: 385 NNIQLWKDNWLPLNPPRPPVGTCDSIYSQLKVSDLLIEGRWNEDLLCKLIHQNDIPHIRA 444
Query: 276 ---------------------YSVKTGYHAADALSHQGTQLEEPPLDFN*NK---EIWTK 169
YSVK+GYH LS Q P + + IW +
Sbjct: 445 IRPSITGANDAITWIYTHDGNYSVKSGYHLLRKLSQQQHASLPSPNEVSAQTVFTNIWKQ 504
Query: 168 HCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCDEA-ESILHLLFLC 16
+ PPK+K F W++ NALP NL+ R + C C EA E + HLLF C
Sbjct: 505 NAPPKIKHFWWRSAHNALPTAGNLKRRRLITDDTCQRCGEASEDVNHLLFQC 556
[12][TOP]
>UniRef100_Q9SIQ5 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=Q9SIQ5_ARATH
Length = 1524
Score = 83.6 bits (205), Expect = 8e-15
Identities = 66/239 (27%), Positives = 97/239 (40%), Gaps = 61/239 (25%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++Q P+ + R++ +Y + S LD V S+GW + G L+K +IG G
Sbjct: 1026 AWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDG 1085
Query: 357 ------LDTLV-------------------------------WNEPWLS----------- 322
LD +V W++ +S
Sbjct: 1086 QNIRIGLDNIVDSHPPRPLNTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHGFI 1145
Query: 321 ----LSTSSTP----MGPNKTRDYSVKTGYHAADALSHQGTQ----LEEPPLDFN*NKEI 178
L+ S P N T +Y+V++GY L+H + + P + I
Sbjct: 1146 HRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWL---LTHDPSTNIPAINPPHGSIDLKTRI 1202
Query: 177 WTKHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCD-EAESILHLLFLCPFAS 4
W PKLK FLW+A+ AL E L RG+ +CP C E ESI H LF CPFA+
Sbjct: 1203 WNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPICPRCHRENESINHALFTCPFAT 1261
[13][TOP]
>UniRef100_Q9M1F2 Putative uncharacterized protein F9K21.130 n=1 Tax=Arabidopsis
thaliana RepID=Q9M1F2_ARATH
Length = 851
Score = 82.8 bits (203), Expect = 1e-14
Identities = 64/236 (27%), Positives = 98/236 (41%), Gaps = 58/236 (24%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQL------G 376
+WRI+Q P+ + R++ +Y + +S +D + S+GW + +G L++ G
Sbjct: 491 AWRIIQYPNSLFARVMKARYFKDNSIIDAKTRSQQSYGWSSLLSGIALLRKGTRYVIGDG 550
Query: 375 KVIGSGLDTLVWNEP---------------------------W----------------- 328
K I G+D +V + P W
Sbjct: 551 KTIRLGIDNVVDSHPPRPLLTDEQHNGLSLDNLFQHRGHSRCWDNAKLQTFVDQSDHDYI 610
Query: 327 --LSLSTSSTP----MGPNKTRDYSVKTGYH-AADALSHQGTQLEEPPLDFN*NKEIWTK 169
+ LST S N T DY+V++GY + S+ + +P + +IW
Sbjct: 611 KRIYLSTRSKTDRLIWSYNSTGDYTVRSGYWLSTHDPSNTIPTMAKPHGSVDLKTKIWNL 670
Query: 168 HCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHC-DEAESILHLLFLCPFAS 4
PKLK FLW+ + ALP + L RG+ CP C E ESI H LF CPFA+
Sbjct: 671 PIMPKLKHFLWRILSKALPTTDRLTTRGMRIDPGCPRCRRENESINHALFTCPFAT 726
[14][TOP]
>UniRef100_Q9SKJ4 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=Q9SKJ4_ARATH
Length = 1750
Score = 82.0 bits (201), Expect = 2e-14
Identities = 66/239 (27%), Positives = 96/239 (40%), Gaps = 61/239 (25%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++Q P+ + R++ +Y + S LD V S+GW + G L+K +IG G
Sbjct: 1252 AWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDG 1311
Query: 357 ------LDTLV-------------------------------WNEPWLS----------- 322
LD +V W++ +S
Sbjct: 1312 QNIRIGLDNIVDSHPPRPLNTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHGFI 1371
Query: 321 ----LSTSSTP----MGPNKTRDYSVKTGYHAADALSHQGTQ----LEEPPLDFN*NKEI 178
L+ S P N T +Y+V++GY L+H + + P + I
Sbjct: 1372 HRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWL---LTHDPSTNIPAINPPHGSIDLKTRI 1428
Query: 177 WTKHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCD-EAESILHLLFLCPFAS 4
W PKLK FLW+A+ AL E L RG+ CP C E ESI H LF CPFA+
Sbjct: 1429 WNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFAT 1487
[15][TOP]
>UniRef100_Q8H0A5 Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa
Japonica Group RepID=Q8H0A5_ORYSJ
Length = 1557
Score = 80.1 bits (196), Expect = 9e-14
Identities = 60/235 (25%), Positives = 90/235 (38%), Gaps = 58/235 (24%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ +P + R+L KY S +D S +S GW+ I G +L+K + IG+G
Sbjct: 1239 AWRLIDNPDSLCARVLKAKYYPNGSIVDTSFGGNASPGWQAIEHGLELVKKGIIWRIGNG 1298
Query: 357 LDTLVWNEPWLSLSTSSTPMGP-------------------------------------- 292
VW +PWL S P+ P
Sbjct: 1299 RSVRVWQDPWLPRDLSRRPITPKNNCRIKWVADLMLDNGMWDANKINQIFLPVDVEIILK 1358
Query: 291 --NKTRD--------------YSVKTGYHAADALSHQGTQLEEPPLDFN*NKE---IWTK 169
+RD +SV+T Y A+ + + + D N K +W
Sbjct: 1359 LRTSSRDEEDFIAWHPDKLGNFSVRTAYRLAENWAKE--EASSSSSDVNIRKAWELLWKC 1416
Query: 168 HCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCD-EAESILHLLFLCPFA 7
+ P K+KIF W+A N LP +N + R + C C E E +H L CP A
Sbjct: 1417 NVPSKVKIFTWRATSNCLPTWDNKKKRNLEISDTCVICGMEKEDTMHALCRCPQA 1471
[16][TOP]
>UniRef100_Q7G249 Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa
Japonica Group RepID=Q7G249_ORYSJ
Length = 1585
Score = 80.1 bits (196), Expect = 9e-14
Identities = 60/235 (25%), Positives = 90/235 (38%), Gaps = 58/235 (24%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ +P + R+L KY S +D S +S GW+ I G +L+K + IG+G
Sbjct: 1267 AWRLIDNPDSLCARVLKAKYYPNGSIVDTSFGGNASPGWQAIEHGLELVKKGIIWRIGNG 1326
Query: 357 LDTLVWNEPWLSLSTSSTPMGP-------------------------------------- 292
VW +PWL S P+ P
Sbjct: 1327 RSVRVWQDPWLPRDLSRRPITPKNNCRIKWVADLMLDNGMWDANKINQIFLPVDVEIILK 1386
Query: 291 --NKTRD--------------YSVKTGYHAADALSHQGTQLEEPPLDFN*NKE---IWTK 169
+RD +SV+T Y A+ + + + D N K +W
Sbjct: 1387 LRTSSRDEEDFIAWHPDKLGNFSVRTAYRLAENWAKE--EASSSSSDVNIRKAWELLWKC 1444
Query: 168 HCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCD-EAESILHLLFLCPFA 7
+ P K+KIF W+A N LP +N + R + C C E E +H L CP A
Sbjct: 1445 NVPSKVKIFTWRATSNCLPTWDNKKKRNLEISDTCVICGMEKEDTMHALCRCPQA 1499
[17][TOP]
>UniRef100_O81630 F8M12.22 protein n=1 Tax=Arabidopsis thaliana RepID=O81630_ARATH
Length = 1662
Score = 78.2 bits (191), Expect = 4e-13
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
Frame = -2
Query: 534 WRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGL 355
WR++ +P+ + RI+ +Y R S LD S+GW + G D+IK ++G G
Sbjct: 1253 WRMINNPNSLFARIMKARYFREDSILDAKRQRYQSYGWTSMLAGLDVIKKGSRFIVGDGK 1312
Query: 354 --DTLVWNEPWLSLSTSSTPMGPNKTRDYSVKTGYHAADALSHQGTQLEEPPLDFN*NKE 181
WN +S S D+ +H + + HQ + + +
Sbjct: 1313 TGSYRYWNAHLISQLVSPD--------DHRFVMNHHLS-RIVHQDKLVWN--YSSSGDYT 1361
Query: 180 IWTKHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHC-DEAESILHLLFLCPFAS 4
+W PK+K LW+ + ALP L RG++ CP C E E+I H+LF CP+A+
Sbjct: 1362 LWKLPIIPKIKYMLWRTISKALPTRSRLLTRGMDIDPHCPRCPTEEETINHVLFTCPYAA 1421
[18][TOP]
>UniRef100_Q9SLE9 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=Q9SLE9_ARATH
Length = 1319
Score = 76.6 bits (187), Expect = 1e-12
Identities = 63/241 (26%), Positives = 94/241 (39%), Gaps = 64/241 (26%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR+ ++ +I +Y + FL+ S+ WR I G++L+ L ++IG+G
Sbjct: 822 AWRLFSDSKSIVSQIFKSRYFMNTDFLNARQGTRPSYTWRSILYGRELLNGGLKRLIGNG 881
Query: 357 LDTLV-------------------------------------WN---------------- 337
T V WN
Sbjct: 882 EQTNVWIDKWLFDGHSRRPMNLHSLMNIHMKVSHLIDPLTRNWNLKKLTELFHEKDVQLI 941
Query: 336 ---EPWLSLSTSSTPMGPNKTRDYSVKTGYHAADALSHQGTQLE-------EPPLDFN*N 187
P +S S G N Y+VK+GY + + + E P D
Sbjct: 942 MHQRPLISSEDSYCWAGTNNGL-YTVKSGYERSSRETFKNLFKEADVYPSVNPLFD---- 996
Query: 186 KEIWTKHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHC-DEAESILHLLFLCPF 10
++W+ PK+K+F+WKA+K AL V + LR RGI C C +E E+I HLLF CPF
Sbjct: 997 -KVWSLETVPKIKVFMWKALKGALAVEDRLRSRGIRTADGCLFCKEEIETINHLLFQCPF 1055
Query: 9 A 7
A
Sbjct: 1056 A 1056
[19][TOP]
>UniRef100_Q01M84 OSIGBa0135L04.5 protein n=1 Tax=Oryza sativa RepID=Q01M84_ORYSA
Length = 611
Score = 75.9 bits (185), Expect = 2e-12
Identities = 60/238 (25%), Positives = 92/238 (38%), Gaps = 59/238 (24%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ P + R+L KY + S +D + +S GWR I G +L+K + +G+G
Sbjct: 111 AWRLIDRPKSLCARVLRAKYYPSGSLIDTAFGGNASPGWRAIEYGLELLKKGIIWRVGNG 170
Query: 357 LDTLVWNEPWLSLSTSSTP---------------MGPNKTRD------------------ 277
+W +PWL + S P MG + T D
Sbjct: 171 HSIRIWRDPWLPRNHSRRPITVRGNCRTKWVADLMGVDGTWDEQVVKRIFWPMDAELILT 230
Query: 276 ---------------------YSVKTGYHAADAL----SHQGTQLEEPPLDFN*NKEIWT 172
+SV++ Y A L + G+ E +N +W
Sbjct: 231 IRLSARAEEDFLAWHPDKWGVFSVRSAYKLALQLAAIDNGSGSSEAETSKAWN---LVWK 287
Query: 171 KHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCD-EAESILHLLFLCPFASK 1
+ P K+K+F W+A N+L EN R + C C EAE + H L CP A K
Sbjct: 288 CNVPQKVKVFTWRAATNSLATMENKNKRKLEATGTCGICGVEAEDVAHALCRCPQAKK 345
[20][TOP]
>UniRef100_O22220 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=O22220_ARATH
Length = 1094
Score = 73.9 bits (180), Expect = 7e-12
Identities = 59/235 (25%), Positives = 96/235 (40%), Gaps = 60/235 (25%)
Frame = -2
Query: 531 RIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGLD 352
R+ +L +IL +Y S FL + S+ W+ I G++L+ S L K+IG+G +
Sbjct: 601 RLHTDSDSLLSQILKSRYYMNSDFLSATKGTRPSYAWQSILYGRELLVSGLKKIIGNGEN 660
Query: 351 TLVWNE--------------------------------------------PW--LSLSTS 310
T VW + PW + +
Sbjct: 661 TYVWMDNWIFDDKPRRPESLQIMVDIQLKVSQLIDPFSRNWNLNMLRDLFPWKEIQIICQ 720
Query: 309 STPMGPNKTRD---------YSVKTGYHAADALSHQGT--QLEEPPLDFN*NKEIWTKHC 163
PM + Y+VK+ Y H+ + EE P +IW +
Sbjct: 721 QRPMASRQDSFCWFGTNHGLYTVKSEYDLCSRQVHKQMFKEAEEQPSLNPLFGKIWNLNS 780
Query: 162 PPKLKIFLWKAMKNALPVGENLRLRGI---NPLALCPHCDEAESILHLLFLCPFA 7
PK+K+FLWK +K A+ V + LR RG+ + ++CP ++ E++ H+LF CP A
Sbjct: 781 APKIKVFLWKVLKGAVAVEDRLRTRGVLIEDGCSMCP--EKNETLNHILFQCPLA 833
[21][TOP]
>UniRef100_Q2RBM8 Os11g0106066 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q2RBM8_ORYSJ
Length = 1690
Score = 73.2 bits (178), Expect = 1e-11
Identities = 57/236 (24%), Positives = 93/236 (39%), Gaps = 58/236 (24%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR+++ P+ + R+L KY S +D + ++ S WR I G +L+K + +G+G
Sbjct: 1358 AWRLLEFPNSLCARVLKAKYFPNGSLIDTTFSSNVSPTWRAIIYGLELLKKGIIWRVGNG 1417
Query: 357 LDTLVWNEPWLSLSTSSTP----------------------------------------- 301
+W +PW+ S P
Sbjct: 1418 QSIRMWRDPWIPRDHSRRPVTMRGNCRLKWVSDLIGQDGTWDVAQIRRCFLNIDTELILS 1477
Query: 300 --MGPNKTRD-----------YSVKTGYHAADALSHQGTQLEEPPLDFN*NKE---IWTK 169
+ P + D +SV++ Y+ A L++ T+ + K IW
Sbjct: 1478 ICLSPRQEEDFLAWHPDKSGRFSVRSAYNLACRLAN--TEGSSSSFALHSRKSWDLIWKC 1535
Query: 168 HCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCD-EAESILHLLFLCPFAS 4
P K+KIF WK N L +N R R + +C C+ E E+ +H LF CP AS
Sbjct: 1536 KLPQKIKIFAWKVASNCLATMDNKRKRKLVNSDICIICNREVENSVHALFKCPRAS 1591
[22][TOP]
>UniRef100_C5YMI9 Putative uncharacterized protein Sb07g002160 n=1 Tax=Sorghum
bicolor RepID=C5YMI9_SORBI
Length = 469
Score = 73.2 bits (178), Expect = 1e-11
Identities = 60/241 (24%), Positives = 87/241 (36%), Gaps = 63/241 (26%)
Frame = -2
Query: 534 WRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGL 355
WR++ +P + R+L KY L S+ WR I G +K L +G G
Sbjct: 36 WRLLLNPDSLCARVLRSKYFSDGDLLSVVEKPGISYAWRSIVRGVQALKDGLIWRVGDGT 95
Query: 354 DTLVWNEPWLSLSTSS---TPMGP---NKTR----------------------------- 280
+W +PW+ + TP G NK
Sbjct: 96 QINIWTDPWIPQGVTRRPCTPRGQTILNKVSELIDPISGEWDRNLVTDIFWEADVKNILS 155
Query: 279 -------------------DYSVKTGYHAADALSH--QGTQLEEP------PLDFN*NKE 181
D+SVK+ YH + + Q+ E P + N +K
Sbjct: 156 IPLKNEMEDTLAWHYDPKGDFSVKSAYHVLTDMKELSKRRQIGEASASLISPCNNNWHK- 214
Query: 180 IWTKHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCDEA-ESILHLLFLCPFAS 4
IW HCPPK+K+F W+ N+LP+ N+ RG++ CP C E H C F
Sbjct: 215 IWKLHCPPKVKLFFWRFTHNSLPLRMNILRRGMDIDTRCPVCWRLNEDGGHCFLRCKFVK 274
Query: 3 K 1
K
Sbjct: 275 K 275
[23][TOP]
>UniRef100_A5ALI1 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5ALI1_VITVI
Length = 1484
Score = 71.6 bits (174), Expect = 3e-11
Identities = 46/156 (29%), Positives = 69/156 (44%), Gaps = 7/156 (4%)
Frame = -2
Query: 534 WRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGL 355
W ++ P ++ R+L +Y R+ FL + S W+GI + + ++ IG G
Sbjct: 392 WNLITKPDSLIARLLKARYYRSGDFLSARLGHNPSFTWKGIWSSRAILLKGSRWRIGDGC 451
Query: 354 DTLVWNEPWLSLSTS---STP----MGPNKTRDYSVKTGYHAADALSHQGTQLEEPPLDF 196
VWN PWL + + TP + K D + Y A LS G L P+ +
Sbjct: 452 SIDVWNNPWLRDAENFKVETPIIHDLAHLKVHDLWIHDWYRIARWLSLHG-NLSSRPIAW 510
Query: 195 N*NKEIWTKHCPPKLKIFLWKAMKNALPVGENLRLR 88
N +W PPK+K+ LW+A K LP L R
Sbjct: 511 N---MLWDLSIPPKIKLCLWRACKGCLPTRSALXAR 543
[24][TOP]
>UniRef100_C5Y394 Putative uncharacterized protein Sb05g019570 n=1 Tax=Sorghum
bicolor RepID=C5Y394_SORBI
Length = 490
Score = 70.5 bits (171), Expect = 7e-11
Identities = 55/234 (23%), Positives = 90/234 (38%), Gaps = 58/234 (24%)
Frame = -2
Query: 534 WRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGL 355
WR++ +P + R+L G+Y S+FL + +S WR I G+D+++ + + IG G
Sbjct: 162 WRLINTPDSLCARVLKGRYYHDSNFLAATRRKHASQTWRAILAGRDVLQKGIVRRIGDGQ 221
Query: 354 DTLVWNEPWL------------------SLSTSSTPMG---------------------- 295
T +W++ W+ ++S TP G
Sbjct: 222 TTNIWHDRWIPNHFDGTPLVVPDDPQLTTVSELITPSGAWNEEMIKHTFADIDAHAILST 281
Query: 294 -------------PNKTRDYSVKTGYHAAD----ALSHQGTQLEEPPLDFN*NKEIWTKH 166
P K YSV++ Y + QG + + + IW
Sbjct: 282 PIRGTGQDIWGWEPEKHGCYSVRSAYRIVYNEHWQQAEQGRASASGDISW---RRIWRLC 338
Query: 165 CPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCD-EAESILHLLFLCPFA 7
P K+++F W+ + LP L R I P+ C C + ESI H+L C A
Sbjct: 339 VPLKVRVFWWRVINGFLPAKGVLNKRHIEPVPNCDVCGADEESIKHVLMDCTVA 392
[25][TOP]
>UniRef100_A2YJD5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2YJD5_ORYSI
Length = 858
Score = 70.5 bits (171), Expect = 7e-11
Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 22/199 (11%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+W ++ SP + R+L KY S +D T SS GW+GI G +L+K + +G+G
Sbjct: 391 AWHLLDSPDSLCARVLKAKYYPNGSIIDTCFTGNSSPGWKGIEHGLELLKKGIIWRVGNG 450
Query: 357 LDTLVWNEPWLSLSTSSTPM-GPNKTR---------------DYSVKTGYHAADALSHQG 226
+W +PW+ + S + G R ++ V+ + DA G
Sbjct: 451 HSIRIWRDPWIPRNFSRKAISGKGSCRLRWVSDLLDSDGLWDEHRVRHFFLPIDAEVILG 510
Query: 225 TQLEEPPLDFN*NKEIWTKHCPPK-----LKIFLWKAMKNALPVGENLRLRGINPLALCP 61
+ E + P K +KIF WKA+ N+L + N + R + + C
Sbjct: 511 IRTSRG------RDEDFVAWHPDKFGSFSVKIFAWKAITNSLAIMLNKKKRNLEQSSTCT 564
Query: 60 HCD-EAESILHLLFLCPFA 7
C E E + H L CP A
Sbjct: 565 ICGIEEEDVAHALCRCPQA 583
[26][TOP]
>UniRef100_A3BLD1 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=A3BLD1_ORYSJ
Length = 613
Score = 70.1 bits (170), Expect = 1e-10
Identities = 56/241 (23%), Positives = 92/241 (38%), Gaps = 65/241 (26%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ + + R+L KY ++ + S+ WR I G ++K L +G G
Sbjct: 114 AWRLLSNLDSLCARVLKAKYFPDGKLMEVRESPGISYSWRSIVRGVQVLKVGLIWRVGDG 173
Query: 357 LDTLVWNEPWLSLSTSSTPMGP------NKTRD--------------------------- 277
D +WN+PW+ L T+ P+ P NK D
Sbjct: 174 TDIDMWNDPWIPLGTTKRPITPRRGIVLNKVADLINPITGEWDRELIQDIFWEEDVKNIL 233
Query: 276 ---------------------YSVKTGYHAAD------ALSHQGT----QLEEPPLDFN* 190
+SVK+ YH + A+ G + L +
Sbjct: 234 AIPVHNGYSDVAAWHFDPRGIFSVKSAYHTLEYQRDRQAIRQTGESSSGKTSSAALQW-- 291
Query: 189 NKEIWTKHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCDEA-ESILHLLFLCP 13
+++W + PK+K FLW+ N+LP+ +N+ RG+ CP C E+ H F C
Sbjct: 292 -EKLWRLNHLPKVKHFLWRLAHNSLPLRQNISKRGMEIDTRCPVCLRLDENGGHCFFKCK 350
Query: 12 F 10
F
Sbjct: 351 F 351
[27][TOP]
>UniRef100_Q9FYK1 F21J9.30 n=1 Tax=Arabidopsis thaliana RepID=Q9FYK1_ARATH
Length = 1270
Score = 68.9 bits (167), Expect = 2e-10
Identities = 30/91 (32%), Positives = 49/91 (53%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ P C+L R+L +Y + FLD +++ S GWR I G++L+ L K +G G
Sbjct: 833 AWRLLHFPDCLLSRLLKSRYFDATDFLDAALSQRPSFGWRSILFGRELLSKGLQKRVGDG 892
Query: 357 LDTLVWNEPWLSLSTSSTPMGPNKTRDYSVK 265
VW +PW+ + P N D ++K
Sbjct: 893 ASLFVWIDPWIDDNGFRAPWRKNLIYDVTLK 923
[28][TOP]
>UniRef100_Q9FXJ5 F5A9.24 n=1 Tax=Arabidopsis thaliana RepID=Q9FXJ5_ARATH
Length = 1254
Score = 68.9 bits (167), Expect = 2e-10
Identities = 30/91 (32%), Positives = 49/91 (53%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ P C+L R+L +Y + FLD +++ S GWR I G++L+ L K +G G
Sbjct: 836 AWRLLHFPDCLLSRLLKSRYFDATDFLDAALSQRPSFGWRSILFGRELLSKGLQKRVGDG 895
Query: 357 LDTLVWNEPWLSLSTSSTPMGPNKTRDYSVK 265
VW +PW+ + P N D ++K
Sbjct: 896 ASLFVWIDPWIDDNGFRAPWRKNLIYDVTLK 926
Score = 56.2 bits (134), Expect = 1e-06
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Frame = -2
Query: 402 KDLIKSQLGKVIGSGLDTLVWNEPWLSLSTSSTPMGPNKTRDYSVKTGYHAADALSHQG- 226
+D+++ + K + S D VW NK+ D+SVK+ Y A Q
Sbjct: 950 EDILRIKAIKPVISQADFFVWKL--------------NKSGDFSVKSAYWLAYQTKSQNL 995
Query: 225 -TQLEEPPLDFN*NKEIWTKHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPH 58
+++ P ++W PK+KIFLWK + LPV ENL RG ++L PH
Sbjct: 996 RSEVSMQPSTLGLKTQVWNLQTDPKIKIFLWKVLSGILPVAENLNGRG---MSLIPH 1049
[29][TOP]
>UniRef100_Q9C7N6 Reverse transcriptase, putative; 100033-105622 n=1 Tax=Arabidopsis
thaliana RepID=Q9C7N6_ARATH
Length = 1557
Score = 67.8 bits (164), Expect = 5e-10
Identities = 60/222 (27%), Positives = 85/222 (38%), Gaps = 62/222 (27%)
Frame = -2
Query: 486 GKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG----------------- 358
G+Y FL+ + A S+ WR + G+DL+ L K IG+G
Sbjct: 1161 GRYFPDEDFLEADLGARPSYAWRSVLHGRDLLTKGLRKEIGNGNSISVWMDNWIYDNGPR 1220
Query: 357 --------------------LDTLVWNEPWLS---------LSTSSTPMGP--------- 292
LD WN L L P+
Sbjct: 1221 IPLQKHFSVSLNLRVKDLINLDGRCWNRDLLQDLFFQVDIDLICKKKPVVDMDDFWVWLH 1280
Query: 291 NKTRDYSVKTGYHAADALSHQGTQLE------EPPLDFN*NKEIWTKHCPPKLKIFLWKA 130
+K+ +YSVK+GY L Q + E P ++IW+ PK+K+FLW+
Sbjct: 1281 SKSGEYSVKSGYW----LVFQSNKPELLFKACRQPSTNGLKEKIWSTSTFPKIKLFLWRI 1336
Query: 129 MKNALPVGENLRLRGINPLALCPHC-DEAESILHLLFLCPFA 7
+ ALPV + + RG+N C C E ESI H+LF C A
Sbjct: 1337 LSAALPVADQILRRGMNVDPCCQICGQEGESINHVLFTCSVA 1378
[30][TOP]
>UniRef100_Q9SF52 Putative non-LTR reverse transcriptase n=1 Tax=Arabidopsis thaliana
RepID=Q9SF52_ARATH
Length = 484
Score = 66.2 bits (160), Expect = 1e-09
Identities = 61/221 (27%), Positives = 84/221 (38%), Gaps = 61/221 (27%)
Frame = -2
Query: 483 KYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG------LDTLV------- 343
+Y + S LD V S+GW + G L+K +IG G LD +V
Sbjct: 4 RYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHPPRP 63
Query: 342 ------------------------WNEPWLS---------------LSTSSTP----MGP 292
W++ +S L+ S P
Sbjct: 64 LNTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNY 123
Query: 291 NKTRDYSVKTGYHAADALSHQGTQ----LEEPPLDFN*NKEIWTKHCPPKLKIFLWKAMK 124
N T +Y+V++GY L+H + + P + IW PKLK FLW+A+
Sbjct: 124 NTTGEYTVRSGYWL---LTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALS 180
Query: 123 NALPVGENLRLRGINPLALCPHCD-EAESILHLLFLCPFAS 4
AL E L RG+ CP C E ESI H LF CPFA+
Sbjct: 181 QALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFAT 221
[31][TOP]
>UniRef100_Q3EAZ4 Putative uncharacterized protein At3g26855.1 n=1 Tax=Arabidopsis
thaliana RepID=Q3EAZ4_ARATH
Length = 163
Score = 66.2 bits (160), Expect = 1e-09
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = -2
Query: 183 EIWTKHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCDEAESILHLLFLCPFAS 4
+IW+ PK+K+ +WKA+ NALPVG L R I+ C C + E+I H+LF CPFA
Sbjct: 8 DIWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRCRDFETITHILFNCPFAQ 67
Query: 3 K 1
+
Sbjct: 68 R 68
[32][TOP]
>UniRef100_A2Q2Z7 Contains similarity to reverse trancriptase , related n=1
Tax=Medicago truncatula RepID=A2Q2Z7_MEDTR
Length = 407
Score = 66.2 bits (160), Expect = 1e-09
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Frame = -2
Query: 291 NKTRDYSVKTGYHA-----ADALSHQGTQLEEPPLDFN*NKEIWTKHCPPKLKIFLWKAM 127
N T YSVK+GY+ +++ T +E + K+IW+ H P+ K+ LW+ +
Sbjct: 288 NPTGIYSVKSGYNTLRTWQTQQINNTSTSSDETLIW----KKIWSLHTIPRHKVLLWRIL 343
Query: 126 KNALPVGENLRLRGINPLALCPHC-DEAESILHLLFLCPFASK 1
++LPV +LR RGI LCP C + E+I HL CP + +
Sbjct: 344 NDSLPVRSSLRKRGIQCYPLCPRCHSKTETITHLFMSCPLSKR 386
[33][TOP]
>UniRef100_B9F9N2 Putative uncharacterized protein n=2 Tax=Oryza sativa Japonica
Group RepID=B9F9N2_ORYSJ
Length = 279
Score = 65.5 bits (158), Expect = 2e-09
Identities = 48/196 (24%), Positives = 73/196 (37%), Gaps = 35/196 (17%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ P + RIL KY + LD + + SS W+ I G L+K + IG+G
Sbjct: 18 AWRLLTMPDSLCARILKAKYYPHGNLLDTAFPSVSSPTWKAIEHGLQLLKEGVIWRIGNG 77
Query: 357 LDTLVWNEPWLSLSTSSTPMG---------------------------------PNKTRD 277
+ +W W+ S P +T
Sbjct: 78 TNIKIWRHRWIPKGDKSVEWNERLVRHVMKEEDATETLRMNLSGAIDEDFPAWQPERTGM 137
Query: 276 YSVKTGYHAADALSHQGTQLEEPPLDFN*N--KEIWTKHCPPKLKIFLWKAMKNALPVGE 103
++VK+ Y A L + D + +W + PK+KIF WK + LP E
Sbjct: 138 FTVKSAYRLAWNLKQPTSASSSSEADGERKIWRCLWKTNVQPKVKIFAWKLAHDRLPTWE 197
Query: 102 NLRLRGINPLALCPHC 55
N R R I + P C
Sbjct: 198 NKRKRKIEQSGIFPIC 213
[34][TOP]
>UniRef100_Q9SK98 Very similar to retrotransposon reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=Q9SK98_ARATH
Length = 1231
Score = 65.1 bits (157), Expect = 3e-09
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Frame = -2
Query: 291 NKTRDYSVKTGYHAADALSHQGTQLE---EPPLDFN*NKEIWTKHCPPKLKIFLWKAMKN 121
NK+ DYSVK GY A + +E +P L+ + ++W PK+K+FLWK +
Sbjct: 855 NKSGDYSVKLGYWLASNQNLGQVAIEAMMQPSLN-DLKTQVWKLQTEPKIKVFLWKVLSG 913
Query: 120 ALPVGENLRLRGINPLALCPHCD-EAESILHLLFLCPF 10
A+PV + L RG+ + C C E ESI H+LF C F
Sbjct: 914 AIPVVDLLSYRGMKLDSRCQTCGCEGESIQHVLFSCSF 951
Score = 61.6 bits (148), Expect = 3e-08
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++Q P C+ R++ +Y FLD V + S GWR I G+DL+ L K +G+G
Sbjct: 718 AWRLLQFPDCLFARLIKSRYFPVGEFLDSDVGSRPSFGWRSILHGRDLLCRGLVKRVGNG 777
Query: 357 LDTLVWNEPWL 325
VW + WL
Sbjct: 778 KSIRVWIDYWL 788
[35][TOP]
>UniRef100_Q9LHK6 Similarity to non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=Q9LHK6_ARATH
Length = 332
Score = 64.7 bits (156), Expect = 4e-09
Identities = 48/118 (40%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Frame = -2
Query: 336 EPWLSLSTSSTPMG------PNKTRDYSVKTGYHAADALSHQGTQLEEPPLDFN*NKEIW 175
E LSL SST P K YS K+GY A A S+ LEE FN W
Sbjct: 79 EDILSLILSSTKRPDRLWWLPAKAGVYSTKSGY--AMAKSNLVPCLEE---GFNWKTNNW 133
Query: 174 TKHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCDEAESILHLLFLCPFASK 1
+ P +++FL KA K ALP+G L RGI C C E E LH+ F CP A K
Sbjct: 134 KVYTSPMIRMFLSKATKKALPIGTALSARGIVVETGCKRCGEIEDALHIFFRCPIAVK 191
[36][TOP]
>UniRef100_Q2R1K6 Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa
Japonica Group RepID=Q2R1K6_ORYSJ
Length = 1469
Score = 64.7 bits (156), Expect = 4e-09
Identities = 52/212 (24%), Positives = 82/212 (38%), Gaps = 56/212 (26%)
Frame = -2
Query: 483 KYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGLDTLVWNEP--------- 331
KY S +D + +S GWRGI G +L+K + +G+G VW +P
Sbjct: 1038 KYYPNGSIVDTCFSGNASPGWRGIEHGLELLKKGIIWRVGNGQSIRVWRDPWLPRDYSRR 1097
Query: 330 -----------WLS----------------------------------LSTSSTPMGPNK 286
W+S L + P++
Sbjct: 1098 PITRKGNCCIKWVSDLLQDDGTWRVDKVQEHFWPIDVEMILKIRTSASLESDFLAWHPDR 1157
Query: 285 TRDYSVKTGYHAADALSHQGTQLEEPPLDFN*N-KEIWTKHCPPKLKIFLWKAMKNALPV 109
+SV++ YH +L+ G + N + K IW + P K++IF WKA+ N+LP
Sbjct: 1158 LGKFSVRSVYHLVVSLAETGDCSSSTEVLVNKSWKRIWACNVPQKVRIFAWKAISNSLPT 1217
Query: 108 GENLRLRGINPLALCPHCD-EAESILHLLFLC 16
+N + R + L+ C C E E + H L C
Sbjct: 1218 MKNKKKRNLELLSTCCICGAEEEDVAHALCHC 1249
[37][TOP]
>UniRef100_B8B9K5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8B9K5_ORYSI
Length = 285
Score = 63.5 bits (153), Expect = 9e-09
Identities = 57/218 (26%), Positives = 86/218 (39%), Gaps = 57/218 (26%)
Frame = -2
Query: 489 LGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGLDTLVWNEP------- 331
L KY S +D S +S GWR I G +L+K + IG+G +W +P
Sbjct: 22 LAKYYPNGSLIDTSFGGNASLGWRAIEYGLELLKKGIIWHIGNGKSVKLWRDPWIPRSYS 81
Query: 330 -------------WLS-------------LSTSSTPMG---------------------P 292
W+S +S PM P
Sbjct: 82 RRPISAKRNCRLRWVSDLIDRSGSWDTDKISHHFLPMDVEAILNIRLSSRLEEDFIAWHP 141
Query: 291 NKTRDYSVKTGYHAADALSH--QGTQLEEPPLDFN*NKEIWTKHCPPKLKIFLWKAMKNA 118
++ +SV++ YH A AL+ G+ N +W + P K+KIF W+A+ N+
Sbjct: 142 DRLGRFSVRSAYHLAVALAQVDDGSSSSGNGSSRAWNA-LWKCNAPQKVKIFAWRAITNS 200
Query: 117 LPVGENLRLRGINPLALCPHCD-EAESILHLLFLCPFA 7
L EN + R + +C C E+E ++H LF CP A
Sbjct: 201 LTTLENKKKRKLEVSDICTICGVESEYVVHALFRCPHA 238
[38][TOP]
>UniRef100_A2Z302 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2Z302_ORYSI
Length = 350
Score = 62.8 bits (151), Expect = 2e-08
Identities = 49/222 (22%), Positives = 85/222 (38%), Gaps = 58/222 (26%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ +P + R+L KY + +D + +S GWR I G +LIK +G+G
Sbjct: 111 AWRLIVNPDSLCARVLKAKYFPNGTLVDTCFSGNASPGWRAIEFGLELIKKGCIWRVGNG 170
Query: 357 LDTLVWNEPWLSLSTSSTP---------------MGPNKTRD------------------ 277
+W +PW+ S P +GP+ D
Sbjct: 171 QSVRIWRDPWIPRDHSRRPIARKGNCRMKWVSELLGPDGVWDVQKVNRVFLPCDAEEILR 230
Query: 276 ---------------------YSVKTGYHAADALSHQGTQLEEPPLDFN*NKEIWTK--- 169
+ V++ Y +A +L++ E + ++++W
Sbjct: 231 IRTSMRQDEDFLAWHLDKMGRFYVRSAYKSAMSLANMD---ESSSSSDDKSRKMWDLIWK 287
Query: 168 -HCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCDEA 46
P K+KIF+WKA N+L EN + R + +C C A
Sbjct: 288 CEVPQKVKIFMWKAATNSLATMENKKRRKLEQSEICCICGTA 329
[39][TOP]
>UniRef100_Q2HUN6 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
n=1 Tax=Medicago truncatula RepID=Q2HUN6_MEDTR
Length = 1296
Score = 62.4 bits (150), Expect = 2e-08
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 1/176 (0%)
Frame = -2
Query: 540 LSWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGS 361
L W +VQS + + V +L KY +S L+ +V + SS W I KD++K+ G+
Sbjct: 870 LVWDMVQSTNKLWVNLLAKKYSSGTSLLEANVNSNSSPSWFSIIRAKDILKTGYSWRAGA 929
Query: 360 GLDTLVWNEPWLSLSTSSTPMGPNKTRDYSVKTGYHAADALSHQGTQLEEPPLDFN*NKE 181
G + W W S + + D + D L+ T + +
Sbjct: 930 GTSSF-WFSNWSSHGYLGSLVPIIDIHDIHLTV----KDVLTSVETSSNDSVWSW----- 979
Query: 180 IWTKHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCDE-AESILHLLFLC 16
IW P K K+ +W A NA P L R + P A C C E ES LH + C
Sbjct: 980 IWQLTAPEKYKLLIWLACHNAAPTLSLLHHRKMAPAATCSRCGENDESFLHCVRDC 1035
[40][TOP]
>UniRef100_B9F1A0 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9F1A0_ORYSJ
Length = 946
Score = 62.4 bits (150), Expect = 2e-08
Identities = 28/72 (38%), Positives = 42/72 (58%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++QSP + R+L KY S +D +++S GWRGI G L+K + IG+G
Sbjct: 436 AWRLIQSPESLCARVLKAKYYPNGSLVDTCFASSASPGWRGIEYGLKLLKKGIIWRIGNG 495
Query: 357 LDTLVWNEPWLS 322
VW +PWL+
Sbjct: 496 RSIRVWRDPWLA 507
[41][TOP]
>UniRef100_B8AK57 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AK57_ORYSI
Length = 326
Score = 62.4 bits (150), Expect = 2e-08
Identities = 49/181 (27%), Positives = 74/181 (40%), Gaps = 23/181 (12%)
Frame = -2
Query: 534 WRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGL 355
WR++++P+ + R+L G+Y S FL + SSH WR I +D++ L + IG G
Sbjct: 19 WRLIKNPNSLCARVLKGRYYHESEFLQATRKKHSSHTWRAILARRDILFKGLVRRIGDGN 78
Query: 354 DTLVWNEPWLS------------------LSTSSTPMGPNKT---RDYSVKTGYHAADAL 238
T +W + WL +S P G T + + A +L
Sbjct: 79 STRIWQDRWLPGHFRGKPITEPVRQHVHVVSDLLIPSGSWNTELIKQLFLDVDAQAILSL 138
Query: 237 SHQ--GTQLEEPPLDFN*NKEIWTKHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALC 64
Q T P D ++ IW PPK+++F W+ K L GI L L
Sbjct: 139 PRQLDATSHASPSGDTTWSR-IWKLCVPPKVRVFWWRVTKT---------LSGIKVLHLH 188
Query: 63 P 61
P
Sbjct: 189 P 189
[42][TOP]
>UniRef100_P93295 Uncharacterized mitochondrial protein AtMg00310 n=1 Tax=Arabidopsis
thaliana RepID=M310_ARATH
Length = 154
Score = 62.4 bits (150), Expect = 2e-08
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
S+RI+ P +L R+L +Y SS ++CSV S+ WR I G++L+ L + IG G
Sbjct: 74 SFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDG 133
Query: 357 LDTLVWNEPWLSLSTSSTPM 298
+ T VW + W+ T P+
Sbjct: 134 IHTKVWLDRWIMDETPLPPL 153
[43][TOP]
>UniRef100_C7IYX4 Os02g0636500 protein n=1 Tax=Oryza sativa Japonica Group
RepID=C7IYX4_ORYSJ
Length = 625
Score = 62.0 bits (149), Expect = 3e-08
Identities = 28/80 (35%), Positives = 45/80 (56%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++QSP + R+L KY S +D +++S GWRGI G L+K + IG+G
Sbjct: 432 AWRLIQSPESLCARVLKAKYYPNGSLVDTCFASSASPGWRGIEYGLKLLKKGIIWRIGNG 491
Query: 357 LDTLVWNEPWLSLSTSSTPM 298
VW +PW+ + + P+
Sbjct: 492 RSIRVWRDPWVPRNFTRRPI 511
[44][TOP]
>UniRef100_B8BBX0 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8BBX0_ORYSI
Length = 1300
Score = 62.0 bits (149), Expect = 3e-08
Identities = 28/80 (35%), Positives = 44/80 (55%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
SWRI++ P + R+L KY S +D S + +S GWRGI G +L+K + +G+G
Sbjct: 792 SWRILEFPESLCARVLKAKYFPNGSLIDTSFSGNASPGWRGIEYGLELLKQGIIWRVGNG 851
Query: 357 LDTLVWNEPWLSLSTSSTPM 298
+W +PW+ S P+
Sbjct: 852 RTIRIWRDPWIPRDFSRRPI 871
[45][TOP]
>UniRef100_O81441 Putative reverse transcriptase n=1 Tax=Arabidopsis thaliana
RepID=O81441_ARATH
Length = 1077
Score = 61.6 bits (148), Expect = 3e-08
Identities = 46/140 (32%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Frame = -2
Query: 540 LSWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGS 361
LSWR++Q+PSC+L ++LLGKYC+ S+ LD + W K+LI+ QL V
Sbjct: 804 LSWRLLQNPSCLLAKLLLGKYCKHSTLLDWTT------NW-----NKELIR-QLLPVYEK 851
Query: 360 GLDTLVWNEPWLSLSTSSTPMGPNKTRDYSVKTGYHAADALSHQGTQLEEPP-----LDF 196
+ L +P L + P + Y+ +GY A + LE PP +F
Sbjct: 852 DILLL---KPSLLGAADRWAWLPTSSGLYAANSGYFEA---LKETASLENPPNHDLVKNF 905
Query: 195 N*NKEIWTKHCPPKLKIFLW 136
N IW PK K++LW
Sbjct: 906 NWRSNIWGLQTSPKTKLYLW 925
[46][TOP]
>UniRef100_B8AFT5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AFT5_ORYSI
Length = 725
Score = 61.6 bits (148), Expect = 3e-08
Identities = 28/80 (35%), Positives = 44/80 (55%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++QSP + R+L KY S +D ++S GWRGI G L+K + IG+G
Sbjct: 519 AWRLIQSPESLCARVLKAKYYPNGSLVDTCFAGSASPGWRGIEYGLKLLKKGIIWRIGNG 578
Query: 357 LDTLVWNEPWLSLSTSSTPM 298
VW +PW+ + + P+
Sbjct: 579 RSIRVWRDPWVPRNFTRRPI 598
[47][TOP]
>UniRef100_O22148 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=O22148_ARATH
Length = 1374
Score = 60.5 bits (145), Expect = 8e-08
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Frame = -2
Query: 291 NKTRDYSVKTGYHAADALSHQGTQLEE---PPLDFN*NKEIWTKHCPPKLKIFLWKAMKN 121
+++ YSVK+GY + +Q +E P LD ++IW PPK+ FLW+ + N
Sbjct: 1015 SRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSLD-PIFQQIWKLDVPPKIHHFLWRCVNN 1073
Query: 120 ALPVGENLRLRGINPLALCPHC-DEAESILHLLFLCPFA 7
L V NL R + C C E++ HLLF CPFA
Sbjct: 1074 CLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFA 1112
[48][TOP]
>UniRef100_C5X677 Putative uncharacterized protein Sb02g030860 n=1 Tax=Sorghum
bicolor RepID=C5X677_SORBI
Length = 438
Score = 60.5 bits (145), Expect = 8e-08
Identities = 23/81 (28%), Positives = 46/81 (56%)
Frame = -2
Query: 534 WRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGL 355
WR+++ P+ + R+L G+Y + F++ S +S WR I G++ ++ L + +G G+
Sbjct: 19 WRLIERPNSLCARVLKGRYFHDTEFMEASRKKHASGTWRAILVGREALQEGLFRRVGDGV 78
Query: 354 DTLVWNEPWLSLSTSSTPMGP 292
T +W+ W+S + P+ P
Sbjct: 79 STNIWSHKWISNHFAGQPITP 99
[49][TOP]
>UniRef100_Q2QND7 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=Q2QND7_ORYSJ
Length = 305
Score = 59.7 bits (143), Expect = 1e-07
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -2
Query: 210 PPLDFN*NKEIWT-KHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCDEAESIL 34
P L N K+ W+ K PPK+K F+W+ ++NALP NL R + L C C+ A++ +
Sbjct: 47 PTLHLNLLKKTWSDKLIPPKVKTFMWRLIRNALPTANNLHFRIPDILDSCHRCNSAKTSV 106
Query: 33 HLLFLCPFA 7
HL F C FA
Sbjct: 107 HLFFHCSFA 115
[50][TOP]
>UniRef100_C5WZZ0 Putative uncharacterized protein Sb01g048580 n=1 Tax=Sorghum
bicolor RepID=C5WZZ0_SORBI
Length = 517
Score = 59.7 bits (143), Expect = 1e-07
Identities = 27/82 (32%), Positives = 43/82 (52%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WRI+ P + R+L +Y S+ L C A + WR I G +L+K + IGSG
Sbjct: 294 AWRILIEPDTLCGRVLKARYFPNSNILQCKARAGILYTWRSIIDGINLLKEGIIWRIGSG 353
Query: 357 LDTLVWNEPWLSLSTSSTPMGP 292
+ +W +PW+ T+ P+ P
Sbjct: 354 SNVNIWTDPWIPRGTTRKPITP 375
[51][TOP]
>UniRef100_Q9ZQG1 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=Q9ZQG1_ARATH
Length = 1138
Score = 59.3 bits (142), Expect = 2e-07
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = -2
Query: 288 KTRDYSVKTGYHAADALSHQGT--QLEEPPLDFN*NKEIWTKHCPPKLKIFLWKAMKNAL 115
KT +YSVK+GY A + Q P +++W+ PK+K+FLW+ + AL
Sbjct: 784 KTGEYSVKSGYWLAFQSNKLDLIQQANLLPSTNGLKEQVWSTKSSPKIKMFLWRILSAAL 843
Query: 114 PVGENLRLRGINPLALCPHC-DEAESILHLLFLCPFA 7
PV + + RG++ C C DE ES H+LF C A
Sbjct: 844 PVADQIIRRGMSIDPRCQICGDEGESTNHVLFTCSMA 880
[52][TOP]
>UniRef100_B9T8C0 Putative uncharacterized protein n=1 Tax=Ricinus communis
RepID=B9T8C0_RICCO
Length = 295
Score = 59.3 bits (142), Expect = 2e-07
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 25/168 (14%)
Frame = -2
Query: 447 VTAASSHGWRGICTGKDLIKSQLGKVIGSGLDTLVWNEPWLSL----------STSSTPM 298
V S GWR +CT K L+ + IG+G +PW+ S++S
Sbjct: 88 VKLLESWGWRSLCTDKQLLNEGIRCYIGTGKMVNALLDPWVPSLPRFKVDEINSSTSLDT 147
Query: 297 GPNKTRDYSVKTGYHAA---DALSHQGTQLEEPPLDFN*N------------KEIWTKHC 163
G D+ + + A HQ ++ + PL N + K++W
Sbjct: 148 GVADFVDHDLHSWEIALLHQHFPPHQVAEIIKIPLSENQDNSLPSSLARHGWKQLWKMKV 207
Query: 162 PPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCDEAESILHLLFL 19
P K+K+FLW+ + NALPVG L+ R + C C E+ ++L FL
Sbjct: 208 PDKIKVFLWEMLANALPVGSLLQSR-LGSDGTCVRCGALETGMYLFFL 254
[53][TOP]
>UniRef100_Q9SZD8 Putative uncharacterized protein AT4g29090 n=1 Tax=Arabidopsis
thaliana RepID=Q9SZD8_ARATH
Length = 575
Score = 58.5 bits (140), Expect = 3e-07
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Frame = -2
Query: 279 DYSVKTGYHAADALSHQGT---QLEEPPLDFN*NKEIWTKHCPPKLKIFLWKAMKNALPV 109
DY+VK+GY + ++ + ++ EP L+ K IW PK++ FLWK + N+LPV
Sbjct: 222 DYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQK-IWKSQTSPKIQHFLWKCLSNSLPV 280
Query: 108 GENLRLRGINPLALCPHCDEA-ESILHLLFLCPFA 7
L R ++ + C C E++ HLLF C FA
Sbjct: 281 AGALAYRHLSKESACIRCPSCKETVNHLLFKCTFA 315
[54][TOP]
>UniRef100_C5Y175 Putative uncharacterized protein Sb04g017846 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5Y175_SORBI
Length = 397
Score = 58.5 bits (140), Expect = 3e-07
Identities = 25/81 (30%), Positives = 40/81 (49%)
Frame = -2
Query: 534 WRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGL 355
WR+++ P + R+L KY S LD S+ WR I G +++K + +G G
Sbjct: 181 WRLLKEPESLCARVLKAKYHPNGSVLDAQPRRGMSYSWRSILLGLEVVKKGMIWRVGDGA 240
Query: 354 DTLVWNEPWLSLSTSSTPMGP 292
+W++PWL S P+ P
Sbjct: 241 GIHIWSDPWLPRDESRKPLTP 261
[55][TOP]
>UniRef100_Q2HVU8 Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago
truncatula RepID=Q2HVU8_MEDTR
Length = 612
Score = 57.8 bits (138), Expect = 5e-07
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 6/175 (3%)
Frame = -2
Query: 516 PSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLI----KSQLGKVIGSGLDT 349
P ++ RI +Y ++S+L ++ S+ WR I + ++ + +G V + +
Sbjct: 151 PESLVFRIFKAQYFPSTSYLTANLGHNPSYDWRSILRARFIVCGGARWSIGTVFSHDIAS 210
Query: 348 LVWNEPWLS-LSTSSTPMGPNKTRDYSVKTGYHAADALSHQGTQLEEPPLDFN*NKEIWT 172
+ N P S + YSV++ Y + L P +IW
Sbjct: 211 AIINTPLFSKVQHDRIIWKAENDGKYSVRSAYTLCVEELIDTSFLRRPGYW----SDIWR 266
Query: 171 KHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCD-EAESILHLLFLCPF 10
PPK+K F+W+ + LP LR +G+ C +C +E + HL +C F
Sbjct: 267 LKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTF 321
[56][TOP]
>UniRef100_B9FYJ3 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9FYJ3_ORYSJ
Length = 1256
Score = 57.8 bits (138), Expect = 5e-07
Identities = 52/207 (25%), Positives = 81/207 (39%), Gaps = 57/207 (27%)
Frame = -2
Query: 456 DCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGLDTLVWNEP------------------ 331
DC + GWR I G +L+K + IG+G +W +P
Sbjct: 773 DCLIDQKLKGGWRAIEYGLELLKKGIIWHIGNGKSVRLWKDPWIPRSYSRRPISAKRNCR 832
Query: 330 --WLS-------------LSTSSTPMG---------------------PNKTRDYSVKTG 259
W+S +S PM P++ +SV++
Sbjct: 833 LRWVSDLIDQSGSWDNDKISHHFLPMDAEAILNIHLSSRLEEDFIAWHPDRLGRFSVRSA 892
Query: 258 YHAADALS--HQGTQLEEPPLDFN*NKEIWTKHCPPKLKIFLWKAMKNALPVGENLRLRG 85
YH A AL+ + G+ N +W + P K+KIF W+A+ N+L EN + R
Sbjct: 893 YHLAVALAQVNDGSSSSGNGSSRACNA-LWKCNAPQKVKIFAWRAITNSLTTLENKKKRK 951
Query: 84 INPLALCPHCD-EAESILHLLFLCPFA 7
+ +C C E+E ++H LF CP A
Sbjct: 952 LEVSDICTICGVESEYVVHALFHCPHA 978
[57][TOP]
>UniRef100_A2Q2E7 Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago
truncatula RepID=A2Q2E7_MEDTR
Length = 519
Score = 57.8 bits (138), Expect = 5e-07
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 6/175 (3%)
Frame = -2
Query: 516 PSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLI----KSQLGKVIGSGLDT 349
P ++ RI +Y ++S+L ++ S+ WR I + ++ + +G V + +
Sbjct: 58 PESLVFRIFKAQYFPSTSYLTANLGHNPSYDWRSILRARFIVCGGARWSIGTVFSHDIAS 117
Query: 348 LVWNEPWLS-LSTSSTPMGPNKTRDYSVKTGYHAADALSHQGTQLEEPPLDFN*NKEIWT 172
+ N P S + YSV++ Y + L P +IW
Sbjct: 118 AIINTPLFSKVQHDRIIWKAENDGKYSVRSAYTLCVEELIDTSFLRRPGYW----SDIWR 173
Query: 171 KHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCD-EAESILHLLFLCPF 10
PPK+K F+W+ + LP LR +G+ C +C +E + HL +C F
Sbjct: 174 LKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTF 228
[58][TOP]
>UniRef100_UPI0000E12947 Os06g0705600 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12947
Length = 1337
Score = 57.4 bits (137), Expect = 7e-07
Identities = 26/80 (32%), Positives = 41/80 (51%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ +P + R+L KY S D + +S WRGI G DL+K + IG+G
Sbjct: 776 AWRLLDNPDSLCARVLKAKYFPNGSLTDTPFSGNASPRWRGIEHGLDLLKKGIIWRIGNG 835
Query: 357 LDTLVWNEPWLSLSTSSTPM 298
+W +PW+ S P+
Sbjct: 836 CSVRIWRDPWVPRDLSRRPI 855
[59][TOP]
>UniRef100_Q9SIS9 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=Q9SIS9_ARATH
Length = 1715
Score = 57.4 bits (137), Expect = 7e-07
Identities = 28/90 (31%), Positives = 44/90 (48%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WRI+ +P +L R+ G Y +++L + +S+GW I GK L++ L +G G
Sbjct: 1214 AWRILTNPQSLLARLYKGLYYPNTTYLRANKGGHASYGWNSIQEGKLLLQQGLRVRLGDG 1273
Query: 357 LDTLVWNEPWLSLSTSSTPMGPNKTRDYSV 268
T +W +PWL GP D V
Sbjct: 1274 QTTKIWEDPWLPTLPPRPARGPILDEDMKV 1303
[60][TOP]
>UniRef100_Q7XCS1 Retrotransposon protein, putative, unclassified n=2 Tax=Oryza
sativa RepID=Q7XCS1_ORYSJ
Length = 791
Score = 57.0 bits (136), Expect = 8e-07
Identities = 27/80 (33%), Positives = 41/80 (51%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ P + R+L KY S +D S + SS WR I G DL+K + +G+G
Sbjct: 280 AWRLITYPDSLCARVLKAKYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNG 339
Query: 357 LDTLVWNEPWLSLSTSSTPM 298
+W +PWL S P+
Sbjct: 340 NSIRIWRDPWLPRDHSRRPI 359
[61][TOP]
>UniRef100_Q2QWF4 Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa
Japonica Group RepID=Q2QWF4_ORYSJ
Length = 1100
Score = 57.0 bits (136), Expect = 8e-07
Identities = 27/81 (33%), Positives = 41/81 (50%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR+VQ P + R+L KY LD + ++ SS W+GI G +L+K + IG+G
Sbjct: 987 AWRLVQFPDSLCARVLKAKYYPNGDLLDTAFSSVSSDSWKGIVHGLELLKKGVIWRIGTG 1046
Query: 357 LDTLVWNEPWLSLSTSSTPMG 295
+W + WL MG
Sbjct: 1047 RKVHIWRDDWLPREHGLKVMG 1067
[62][TOP]
>UniRef100_B9GCA5 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9GCA5_ORYSJ
Length = 1003
Score = 57.0 bits (136), Expect = 8e-07
Identities = 27/81 (33%), Positives = 41/81 (50%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR+VQ P + R+L KY LD + ++ SS W+GI G +L+K + IG+G
Sbjct: 890 AWRLVQFPDSLCARVLKAKYYPNGDLLDTAFSSVSSDSWKGIVHGLELLKKGVIWRIGTG 949
Query: 357 LDTLVWNEPWLSLSTSSTPMG 295
+W + WL MG
Sbjct: 950 RKVHIWRDDWLPREHGLKVMG 970
[63][TOP]
>UniRef100_C5WM31 Putative uncharacterized protein Sb01g009615 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5WM31_SORBI
Length = 229
Score = 56.6 bits (135), Expect = 1e-06
Identities = 26/82 (31%), Positives = 41/82 (50%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
SWR++Q P+ + ++L KY +S L A S+ WR I G ++K L +G G
Sbjct: 101 SWRLLQQPNSLCAKVLKAKYFPDTSVLLAQPKAGMSYSWRSILEGLKIVKEGLIWRVGDG 160
Query: 357 LDTLVWNEPWLSLSTSSTPMGP 292
+ +W PW+ S P+ P
Sbjct: 161 VGLNIWANPWIPRDFSRRPITP 182
[64][TOP]
>UniRef100_B9S743 Putative uncharacterized protein n=1 Tax=Ricinus communis
RepID=B9S743_RICCO
Length = 315
Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Frame = -2
Query: 276 YSVKTGYHA---ADALSHQGTQLEEPPLDFN*NKEIWTKHCPPKLKIFLWKAMKNALPVG 106
YSV +GY A + + H + L+E + K +W P K+KIF+WK ALPVG
Sbjct: 139 YSVGSGYFAWVHRERIGHH-SNLQEATAVLHHCKNLWKMKIPNKIKIFIWKLFSIALPVG 197
Query: 105 ENLRLRGINPLALCPHCDEAESILHLLFLCPFA 7
+ R + C C +S +HL FLCPF+
Sbjct: 198 SSSASR-LGADGSCIWCGAWKSRMHLFFLCPFS 229
[65][TOP]
>UniRef100_B9G281 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9G281_ORYSJ
Length = 314
Score = 56.6 bits (135), Expect = 1e-06
Identities = 51/196 (26%), Positives = 78/196 (39%), Gaps = 22/196 (11%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ +P + R+L KY + L S S+ WR I G +L+K L +G
Sbjct: 25 AWRLLTNPGTLCARVLKAKYYPHTDVLHSSAKDVISYSWRSILKGVELLKEGLIWRVGDD 84
Query: 357 ---LDTLVWNEPWLSLSTSSTPMGPNKTRD--------YSVKTGYHAA----------DA 241
+D WN + G + +SVK+ Y A DA
Sbjct: 85 EALIDDNFWNVDAEEIKKIPLHDGVDDWAAWRYDPKGVFSVKSAYKVAVRKRDMGSGRDA 144
Query: 240 LSHQGTQLEEPPLDFN*NKEIWTKHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCP 61
S G+ D+ +IW K+++F+W N+L V NL +G+ +CP
Sbjct: 145 SSSSGSVYGTHTFDW---LKIWRCKVAHKVQMFVWWFTHNSLAVRCNLARKGVEIDKICP 201
Query: 60 HCDE-AESILHLLFLC 16
C E HL F C
Sbjct: 202 VCKRFDEDNGHLFFKC 217
[66][TOP]
>UniRef100_B8BLB0 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8BLB0_ORYSI
Length = 314
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Frame = -2
Query: 324 SLSTSSTPMGPNKTRDYSVKTGYHAADALSHQGTQLEEPPLDFN*N-KEIWTKHCPPKLK 148
SL ++ P++ +SV++ YH +L+ G + N + K IW + P K++
Sbjct: 10 SLESNFLAWHPDRLGKFSVRSVYHLVVSLAETGDCSSSTEVLVNKSWKRIWACNVPQKVR 69
Query: 147 IFLWKAMKNALPVGENLRLRGINPLALCPHCD-EAESILHLLFLC 16
IF WKA+ N+LP +N + R + L+ C C E E + H L C
Sbjct: 70 IFAWKAISNSLPTMKNKKKRNLELLSTCCICGAEEEDVAHALCHC 114
[67][TOP]
>UniRef100_B8BCR5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8BCR5_ORYSI
Length = 1350
Score = 56.6 bits (135), Expect = 1e-06
Identities = 28/91 (30%), Positives = 44/91 (48%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ SP + +L KY + D S +S GWR I G +L+K + IG+G
Sbjct: 1069 AWRLIDSPDSLCAMVLKAKYFLNGNLTDTSFGGNASPGWRAIEFGLELLKKGIIWRIGNG 1128
Query: 357 LDTLVWNEPWLSLSTSSTPMGPNKTRDYSVK 265
+W +PW+ S P+ K +Y K
Sbjct: 1129 RSVRIWRDPWIPRDHSRRPI--TKKSNYKTK 1157
[68][TOP]
>UniRef100_Q2HVE9 Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago
truncatula RepID=Q2HVE9_MEDTR
Length = 424
Score = 56.2 bits (134), Expect = 1e-06
Identities = 25/80 (31%), Positives = 44/80 (55%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+W++V SP+ ++ ++L KY S + SV+ S+ WRG+ KD+++ IG+G
Sbjct: 45 AWKLVTSPNSLITKLLKAKYYPRSDYFGASVSHNPSYVWRGLWRVKDMVRRSFQWSIGTG 104
Query: 357 LDTLVWNEPWLSLSTSSTPM 298
VW++ WL TP+
Sbjct: 105 ESISVWHQLWLGNHEQLTPV 124
[69][TOP]
>UniRef100_O80790 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=O80790_ARATH
Length = 970
Score = 56.2 bits (134), Expect = 1e-06
Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 22/196 (11%)
Frame = -2
Query: 534 WRIVQSPSCVLVRILLGKY----CRTSSFLDCSVTAASSHGWRGICTG-KDLIKSQLGKV 370
WR++ + R+L KY + S++L + +S+ WR + G ++++ + V
Sbjct: 516 WRLLHDKETLWARVLSKKYKVGEMQNSNWLKPKSSWSST--WRSVTVGLREVVAKGVRWV 573
Query: 369 IGSGLDTLVWNEPWLSLSTSSTPMGPNKTRDYSVKTGYHAADALSHQGTQ---------- 220
G G W++ WL S S+ +D LS +GTQ
Sbjct: 574 PGDGKTISFWSDRWLLQEQLSA------VAKESISADALLSDELSWKGTQNGDFTVRSAY 627
Query: 219 ------LEEPPLDFN*NKEIWTKHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPH 58
EE PL + K+IW P ++++F+W + R ++ +A C
Sbjct: 628 ELLKPEAEERPLIGSFLKQIWKLVAPERVRVFIWLVSHMVIMTNVERVRRHLSDIATCSV 687
Query: 57 CDEA-ESILHLLFLCP 13
C+ A ESILH+L CP
Sbjct: 688 CNGADESILHVLRDCP 703
[70][TOP]
>UniRef100_C5Y062 Putative uncharacterized protein Sb04g011140 n=1 Tax=Sorghum
bicolor RepID=C5Y062_SORBI
Length = 228
Score = 56.2 bits (134), Expect = 1e-06
Identities = 24/88 (27%), Positives = 45/88 (51%)
Frame = -2
Query: 534 WRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGL 355
WR++ +P + ++L G+Y F+ S +SH W+ I G++++ L K IG G
Sbjct: 62 WRLLTNPDSLCAKVLKGRYYHDGEFVTSSRKRHASHTWKAILAGREVLNLGLIKRIGDGS 121
Query: 354 DTLVWNEPWLSLSTSSTPMGPNKTRDYS 271
T +W + W+ + P+ P ++ S
Sbjct: 122 LTNIWRDRWIPKHFQTKPLTPQDGQEVS 149
[71][TOP]
>UniRef100_Q8S5K1 Putative retroelement n=1 Tax=Oryza sativa Japonica Group
RepID=Q8S5K1_ORYSJ
Length = 1888
Score = 55.8 bits (133), Expect = 2e-06
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ P + RIL Y S +D S +S GWR I G +L+K + IG+G
Sbjct: 1440 AWRLLDRPDSLCARILKAIYYPNGSLIDTSFGGNASPGWRAIEYGLELLKKGIIWRIGNG 1499
Query: 357 LDTLVWNEPWLSLSTSSTPMGPNK 286
+W +PW+ S S P+ +
Sbjct: 1500 KSVRLWRDPWIPRSYSRRPISAKR 1523
[72][TOP]
>UniRef100_Q75M12 Putative uncharacterized protein P0431G05.11 n=1 Tax=Oryza sativa
Japonica Group RepID=Q75M12_ORYSJ
Length = 1936
Score = 55.8 bits (133), Expect = 2e-06
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR+++ P+ + ++L KY S D + +A +S W GI G DL+K + IG+G
Sbjct: 1510 AWRLIEFPNSLCAQVLKAKYFPHGSLTDTTFSANASPTWHGIEYGLDLLKKGIIWRIGNG 1569
Query: 357 LDTLVWNEPWLSLSTSSTPM 298
+W +PW+ S P+
Sbjct: 1570 NSVRIWRDPWIPRDLSRRPV 1589
[73][TOP]
>UniRef100_Q33AJ4 Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa
Japonica Group RepID=Q33AJ4_ORYSJ
Length = 1853
Score = 55.8 bits (133), Expect = 2e-06
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ P + RIL Y S +D S +S GWR I G +L+K + IG+G
Sbjct: 1405 AWRLLDRPDSLCARILKAIYYPNGSLIDTSFGGNASPGWRAIEYGLELLKKGIIWRIGNG 1464
Query: 357 LDTLVWNEPWLSLSTSSTPMGPNK 286
+W +PW+ S S P+ +
Sbjct: 1465 KSVRLWRDPWIPRSYSRRPISAKR 1488
[74][TOP]
>UniRef100_Q2QNW5 Retrotransposon protein, putative, unclassified, expressed n=1
Tax=Oryza sativa Japonica Group RepID=Q2QNW5_ORYSJ
Length = 589
Score = 55.8 bits (133), Expect = 2e-06
Identities = 28/86 (32%), Positives = 42/86 (48%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++Q + RIL KY S +D SS W+GI G L+K L IG G
Sbjct: 312 AWRLIQYLESLCARILKAKYYPNSELIDAVFPVDSSPSWKGIEHGLHLLKKGLVWRIGDG 371
Query: 357 LDTLVWNEPWLSLSTSSTPMGPNKTR 280
+W + W+ ++ PMG ++ R
Sbjct: 372 SKVNIWRDQWIPKESAFKPMGRSRCR 397
[75][TOP]
>UniRef100_Q7XS38 OSJNBa0081G05.2 protein n=2 Tax=Oryza sativa RepID=Q7XS38_ORYSJ
Length = 1711
Score = 55.8 bits (133), Expect = 2e-06
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR+++ P+ + ++L KY S D + +A +S W GI G DL+K + IG+G
Sbjct: 1354 AWRLIEFPNSLCAQVLKAKYFPHGSLTDTTFSANASPTWHGIEYGLDLLKKGIIWRIGNG 1413
Query: 357 LDTLVWNEPWLSLSTSSTPM 298
+W +PW+ S P+
Sbjct: 1414 NSVRIWRDPWIPKDLSRRPV 1433
[76][TOP]
>UniRef100_O64712 Putative reverse transcriptase n=1 Tax=Arabidopsis thaliana
RepID=O64712_ARATH
Length = 365
Score = 55.8 bits (133), Expect = 2e-06
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Frame = -2
Query: 270 VKTGYHAA---DALSHQGTQLEEPPLDFN*NKEIWTKHCPPKLKIFLWKAMKNALPVGEN 100
+++GY A D L + Q PP + IW H PK+K FLW+ + AL
Sbjct: 6 LRSGYWVATHEDLLEEEAIQ--PPPGSTEVKQAIWKLHVAPKIKHFLWRCVTGALATNTR 63
Query: 99 LRLRGINPLALCPH-CDEAESILHLLFLCPF 10
LR R I+ +C C E E+I H++F CP+
Sbjct: 64 LRSRNIDADPICQRCCIEEETIHHIMFNCPY 94
[77][TOP]
>UniRef100_B9GDN1 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9GDN1_ORYSJ
Length = 740
Score = 55.8 bits (133), Expect = 2e-06
Identities = 28/86 (32%), Positives = 42/86 (48%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++Q + RIL KY S +D SS W+GI G L+K L IG G
Sbjct: 312 AWRLIQYLESLCARILKAKYYPNSELIDAVFPVDSSPSWKGIEHGLHLLKKGLVWRIGDG 371
Query: 357 LDTLVWNEPWLSLSTSSTPMGPNKTR 280
+W + W+ ++ PMG ++ R
Sbjct: 372 SKVNIWRDQWIPKESAFKPMGRSRCR 397
[78][TOP]
>UniRef100_B8BME5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8BME5_ORYSI
Length = 725
Score = 55.8 bits (133), Expect = 2e-06
Identities = 28/86 (32%), Positives = 42/86 (48%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++Q + RIL KY S +D SS W+GI G L+K L IG G
Sbjct: 297 AWRLIQYLESLCARILKAKYYPNSELIDAVFPVDSSPSWKGIEHGLHLLKKGLVWRIGDG 356
Query: 357 LDTLVWNEPWLSLSTSSTPMGPNKTR 280
+W + W+ ++ PMG ++ R
Sbjct: 357 SKVNIWRDQWIRKESAFKPMGRSRCR 382
[79][TOP]
>UniRef100_B8ASR6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8ASR6_ORYSI
Length = 1296
Score = 55.8 bits (133), Expect = 2e-06
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR+++ P+ + ++L KY S D + +A +S W GI G DL+K + IG+G
Sbjct: 1051 AWRLIEFPNSLCAQVLKAKYFPHGSLTDTTFSANASPTWHGIEYGLDLLKKGIIWRIGNG 1110
Query: 357 LDTLVWNEPWLSLSTSSTPM 298
+W +PW+ S P+
Sbjct: 1111 NSVRIWRDPWIPKDLSRRPV 1130
[80][TOP]
>UniRef100_C5Y6C2 Putative uncharacterized protein Sb05g024303 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5Y6C2_SORBI
Length = 191
Score = 55.5 bits (132), Expect = 2e-06
Identities = 26/81 (32%), Positives = 40/81 (49%)
Frame = -2
Query: 534 WRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGL 355
WRI+Q+P + ++L KY S L S S+ WR I G ++ L IG G+
Sbjct: 87 WRILQNPDSLCAQLLRAKYGTNGSLLQTSEGPGISYTWRSIVRGLQALQKGLIWRIGDGM 146
Query: 354 DTLVWNEPWLSLSTSSTPMGP 292
+W +PW+S + P+ P
Sbjct: 147 QINIWEDPWISNGITRRPITP 167
[81][TOP]
>UniRef100_B8BDD1 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8BDD1_ORYSI
Length = 401
Score = 55.5 bits (132), Expect = 2e-06
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ +P + R+L KY + +D + +S GWR I G +LIK +G+G
Sbjct: 162 AWRLIVNPDSLCARVLKAKYFPNGTLVDTCFSGNASPGWRAIEYGLELIKKGCIWRVGNG 221
Query: 357 LDTLVWNEPWLSLSTSSTPM 298
+W +PW+ S P+
Sbjct: 222 QSVCIWRDPWIPRDHSRRPI 241
[82][TOP]
>UniRef100_Q7XLZ5 OSJNBa0086O06.14 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q7XLZ5_ORYSJ
Length = 1205
Score = 55.1 bits (131), Expect = 3e-06
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR+++SP + R+L KY + D + + SS W+GI G +L+K L IG G
Sbjct: 858 AWRLIESPDSLCARVLKAKYYPNGTITDTAFPSVSSPTWKGIVHGLELLKKGLIWRIGDG 917
Query: 357 LDTLVWNEPWLS 322
T +W W++
Sbjct: 918 SKTKIWRNHWVA 929
[83][TOP]
>UniRef100_Q2HS45 RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=Medicago
truncatula RepID=Q2HS45_MEDTR
Length = 653
Score = 55.1 bits (131), Expect = 3e-06
Identities = 46/191 (24%), Positives = 79/191 (41%), Gaps = 31/191 (16%)
Frame = -2
Query: 534 WRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGL 355
W + +P ++ RI KY +FL S+ S+ WR I + + +K+ IG G
Sbjct: 464 WNFLTNPDAMVSRIFKAKYFTNENFLGASLGHNPSYVWRSIWSSRIFLKTGYQWRIGDGS 523
Query: 354 DTLV-----------WNEPWLSLSTSSTPMGP-------------------NKTRDYSVK 265
T WNEP + + + + +K YSVK
Sbjct: 524 TTATVSHLIDAQTRSWNEPLIRNNFNLRDVDEILKIPLLHCEQNDAIIWRFDKKGVYSVK 583
Query: 264 TGYH-AADALSHQGTQLEEPPLDFN*NKEIWTKHCPPKLKIFLWKAMKNALPVGENLRLR 88
Y D L ++ +E ++ + NK +W+ PPK+K F+W+ ++ LP + L +
Sbjct: 584 NAYRVCVDVLINR----DEWKVEGDRNK-LWSLPIPPKVKHFMWRLGRDCLPNRQRLNCK 638
Query: 87 GINPLALCPHC 55
G+ + C C
Sbjct: 639 GVVCTSNCVIC 649
[84][TOP]
>UniRef100_B9FC76 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9FC76_ORYSJ
Length = 1494
Score = 55.1 bits (131), Expect = 3e-06
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR+++SP + R+L KY + D + + SS W+GI G +L+K L IG G
Sbjct: 1122 AWRLIESPDSLCARVLKAKYYPNGTITDTAFPSVSSPTWKGIVHGLELLKKGLIWRIGDG 1181
Query: 357 LDTLVWNEPWLS 322
T +W W++
Sbjct: 1182 SKTKIWRNHWVA 1193
[85][TOP]
>UniRef100_B8ATM1 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8ATM1_ORYSI
Length = 1026
Score = 55.1 bits (131), Expect = 3e-06
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR+++SP + R+L KY + D + + SS W+GI G +L+K L IG G
Sbjct: 639 AWRLIESPDSLCARVLKAKYYPNGTITDTAFPSVSSPTWKGIVHGLELLKKGLIWRIGDG 698
Query: 357 LDTLVWNEPWLS 322
T +W W++
Sbjct: 699 RKTKIWRNHWVA 710
[86][TOP]
>UniRef100_Q9ZVH1 T2P11.5 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZVH1_ARATH
Length = 240
Score = 54.7 bits (130), Expect = 4e-06
Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = -2
Query: 177 WTKHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHCDE-AESILHLLFLC 16
W CPPKL FLW+ + +P+ +NLR RGIN C C E+I H LFLC
Sbjct: 19 WKVQCPPKLYHFLWQILAGCVPITDNLRKRGINCEIGCSRCGALEETINHTLFLC 73
[87][TOP]
>UniRef100_C7J217 Os05g0434000 protein n=1 Tax=Oryza sativa Japonica Group
RepID=C7J217_ORYSJ
Length = 1478
Score = 54.7 bits (130), Expect = 4e-06
Identities = 25/71 (35%), Positives = 38/71 (53%)
Frame = -2
Query: 504 LVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGLDTLVWNEPWL 325
L ++L KY S L C+ S+ WR I G DLIK L +G+G + +WN+PW+
Sbjct: 1158 LTKVLKAKYFLDGSILQCAPRDGISYTWRSILKGVDLIKEGLVWRVGTGENVNIWNDPWM 1217
Query: 324 SLSTSSTPMGP 292
+ + P+ P
Sbjct: 1218 PVGFTRRPITP 1228
[88][TOP]
>UniRef100_Q2QUC2 Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa
Japonica Group RepID=Q2QUC2_ORYSJ
Length = 1913
Score = 54.3 bits (129), Expect = 6e-06
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ P + R++ KY S +D + +S GWR I G L+K + IG+G
Sbjct: 1445 AWRLLDKPDSLCARVMKAKYYPNGSLVDTAFGGNASPGWRAIEHGLALLKKGIVWRIGNG 1504
Query: 357 LDTLVWNEPWLSLSTSSTPM 298
+W +PW+ S P+
Sbjct: 1505 RSVRIWRDPWIPRDHSCRPI 1524
[89][TOP]
>UniRef100_C5WNV7 Putative uncharacterized protein Sb01g011130 n=1 Tax=Sorghum
bicolor RepID=C5WNV7_SORBI
Length = 463
Score = 54.3 bits (129), Expect = 6e-06
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Frame = -2
Query: 276 YSVKTGYHAADAL-----SHQGTQLEEPPLDFN*NKEIWTKHCPPKLKIFLWKAMKNALP 112
+SVK+ Y A + QG Q P + K +W CP K+K FLW+ + N+ P
Sbjct: 108 FSVKSAYKVARDTYIRNHTSQGQQGGSNPGPLSLWKRVWKLSCPNKIKHFLWRFLHNSHP 167
Query: 111 VGENLRLRGINPLALCPHCDE-AESILHLLFLCPFA 7
+ +NL RG+ + CP C++ E HL F C A
Sbjct: 168 LRDNLIRRGMEIVPRCPVCNQVGEDGGHLFFKCGMA 203
[90][TOP]
>UniRef100_B8B7F1 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8B7F1_ORYSI
Length = 1015
Score = 54.3 bits (129), Expect = 6e-06
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ P + R++ KY S +D + +S GWR I G L+K + IG+G
Sbjct: 703 AWRLLDKPDSLCARVMKAKYYPNGSLVDTAFGGNASPGWRAIEHGLALLKKGIVWRIGNG 762
Query: 357 LDTLVWNEPWLSLSTSSTPM 298
+W +PW+ S P+
Sbjct: 763 RSVRIWRDPWIPRDHSRRPI 782
[91][TOP]
>UniRef100_B9FNP9 Putative uncharacterized protein n=2 Tax=Oryza sativa
RepID=B9FNP9_ORYSJ
Length = 616
Score = 54.3 bits (129), Expect = 6e-06
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ +P + R+L KY S +D S + +S W+ I G L+K + +G+G
Sbjct: 390 AWRLIDNPDSLCARVLKAKYYPNGSLVDTSFSGCASPCWKAIEFGLALLKEGIIWRVGNG 449
Query: 357 LDTLVWNEPWLSLSTSSTPM 298
+W +PWL S P+
Sbjct: 450 KSIRIWRDPWLPRDFSRRPI 469
[92][TOP]
>UniRef100_Q7X970 BZIP-like protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q7X970_ORYSJ
Length = 2367
Score = 53.9 bits (128), Expect = 7e-06
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ P + R+L KY S +D S + SS WR I G DL+K + +G+G
Sbjct: 1604 AWRLITYPDSLCARVLKAKYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNG 1663
Query: 357 LDTLVWNEPWLSLSTSSTPM 298
+W + WL S P+
Sbjct: 1664 NSIRIWRDSWLPRDHSRRPI 1683
[93][TOP]
>UniRef100_Q2QXH7 Os12g0156200 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q2QXH7_ORYSJ
Length = 1764
Score = 53.9 bits (128), Expect = 7e-06
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ P + R+L KY S +D S + SS WR I G DL+K + +G+G
Sbjct: 1001 AWRLITYPDSLCARVLKAKYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNG 1060
Query: 357 LDTLVWNEPWLSLSTSSTPM 298
+W + WL S P+
Sbjct: 1061 NSIRIWRDSWLPRDHSRRPI 1080
[94][TOP]
>UniRef100_C5XCY9 Putative uncharacterized protein Sb02g025125 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5XCY9_SORBI
Length = 457
Score = 53.9 bits (128), Expect = 7e-06
Identities = 35/98 (35%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = -2
Query: 294 PNKTRDYSVKTGYHAADALSHQGTQLEEPPLDFN*N-KEIWTKHCPPKLKIFLWKAMKNA 118
P K YSVK+ Y D G E N EIW PPK+K+F W+ +
Sbjct: 141 PEKHGVYSVKSAYRLIDKGRTNGGHQEAVGGSGNSCWSEIWKLKVPPKVKVFWWRVLHEF 200
Query: 117 LPVGENLRLRGINPLALCPHCD-EAESILHLLFLCPFA 7
LP L + I P+A C C ++ESI H+L C A
Sbjct: 201 LPTRLALHRKHIEPIANCDACGADSESIQHVLMECQIA 238
[95][TOP]
>UniRef100_B8BN96 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8BN96_ORYSI
Length = 1765
Score = 53.9 bits (128), Expect = 7e-06
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ P + R+L KY S +D S + SS WR I G DL+K + +G+G
Sbjct: 1327 AWRLITYPDSLCARVLKAKYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNG 1386
Query: 357 LDTLVWNEPWLSLSTSSTPM 298
+W + WL S P+
Sbjct: 1387 NSIRIWRDSWLPRDHSRRPI 1406
[96][TOP]
>UniRef100_B4FYB2 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FYB2_MAIZE
Length = 406
Score = 53.5 bits (127), Expect = 9e-06
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = -2
Query: 234 HQGTQLEEPPLDFN*NKEIWTKHCPPKLKIFLWKAMKNALPVGENLRLRGINPLALCPHC 55
++G +L +P K +W PPK K FLW A++N + L +RG++ C C
Sbjct: 229 YEGQKLPQPW------KRLWKSWAPPKCKFFLWLAIRNKCWTSDRLEMRGLDHPVSCLFC 282
Query: 54 D-EAESILHLLFLCPFA 7
D E E+I H+L C FA
Sbjct: 283 DQEQETIQHILCSCVFA 299
[97][TOP]
>UniRef100_A2YMV2 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2YMV2_ORYSI
Length = 374
Score = 53.5 bits (127), Expect = 9e-06
Identities = 23/84 (27%), Positives = 41/84 (48%)
Frame = -2
Query: 537 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 358
+WR++ + + R+L KY ++ + S+ WR I G ++K L +G
Sbjct: 114 AWRLLSNLDSLCARVLKAKYFPDGKLMEVRESPGISYSWRSIVRGVQVLKVGLIWRVGDS 173
Query: 357 LDTLVWNEPWLSLSTSSTPMGPNK 286
D +WN+PW+ L T+ P P +
Sbjct: 174 TDIDMWNDPWIPLGTTRRPTTPRR 197