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[1][TOP]
>UniRef100_Q9ZUU4 Ribonucleoprotein At2g37220, chloroplastic n=2 Tax=Arabidopsis
thaliana RepID=ROC1_ARATH
Length = 289
Score = 206 bits (524), Expect = 6e-52
Identities = 107/107 (100%), Positives = 107/107 (100%)
Frame = +2
Query: 44 MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA 223
MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA
Sbjct: 1 MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA 60
Query: 224 RNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQL 364
RNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQL
Sbjct: 61 RNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQL 107
[2][TOP]
>UniRef100_Q8L941 Putative RNA-binding protein n=1 Tax=Arabidopsis thaliana
RepID=Q8L941_ARATH
Length = 289
Score = 204 bits (520), Expect = 2e-51
Identities = 106/107 (99%), Positives = 106/107 (99%)
Frame = +2
Query: 44 MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA 223
MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRF
Sbjct: 1 MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFV 60
Query: 224 RNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQL 364
RNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQL
Sbjct: 61 RNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQL 107
[3][TOP]
>UniRef100_Q43349-2 Isoform 2 of 29 kDa ribonucleoprotein, chloroplastic n=1
Tax=Arabidopsis thaliana RepID=Q43349-2
Length = 334
Score = 124 bits (310), Expect = 4e-27
Identities = 79/117 (67%), Positives = 89/117 (76%), Gaps = 10/117 (8%)
Frame = +2
Query: 44 MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSD---SVSFSIAAKWNSPA- 211
M+ASASSL S+FNPKSLP VSRPASVS+L PSLSFKL+SD S+ S A K +SPA
Sbjct: 1 MSASASSL--SAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAE 58
Query: 212 --SRFARNVAITSEFEVEEDG-FA---DVAPPKEQSFSADLKLFVGNLPFNVDSAQL 364
SRF RNVA++S+FEVEED FA D AP + SFS DLKLFVGNL FNVDSAQL
Sbjct: 59 YPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQL 115
[4][TOP]
>UniRef100_Q43349 29 kDa ribonucleoprotein, chloroplastic n=1 Tax=Arabidopsis
thaliana RepID=ROC2_ARATH
Length = 342
Score = 124 bits (310), Expect = 4e-27
Identities = 79/117 (67%), Positives = 89/117 (76%), Gaps = 10/117 (8%)
Frame = +2
Query: 44 MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSD---SVSFSIAAKWNSPA- 211
M+ASASSL S+FNPKSLP VSRPASVS+L PSLSFKL+SD S+ S A K +SPA
Sbjct: 1 MSASASSL--SAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAE 58
Query: 212 --SRFARNVAITSEFEVEEDG-FA---DVAPPKEQSFSADLKLFVGNLPFNVDSAQL 364
SRF RNVA++S+FEVEED FA D AP + SFS DLKLFVGNL FNVDSAQL
Sbjct: 59 YPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQL 115
[5][TOP]
>UniRef100_B9IFN7 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IFN7_POPTR
Length = 273
Score = 89.7 bits (221), Expect = 9e-17
Identities = 57/107 (53%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
Frame = +2
Query: 47 AASASSLALSSFN-PKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA 223
AASASSL L S N P ++ S+P S+ LSPS + L S+ S + +SRF
Sbjct: 3 AASASSLVLPSLNHPNTIKSFYSKPNSLFFLSPSSTSSLKPVSLLLSFQHQQQPLSSRFL 62
Query: 224 RNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQL 364
+NVAI+SEF EED +D EQSFS DLKLFVGNLPFNVDSA+L
Sbjct: 63 KNVAISSEFGQEEDFLSD---GDEQSFSQDLKLFVGNLPFNVDSARL 106
[6][TOP]
>UniRef100_A7PT43 Chromosome chr8 scaffold_29, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PT43_VITVI
Length = 288
Score = 86.3 bits (212), Expect = 1e-15
Identities = 57/110 (51%), Positives = 76/110 (69%), Gaps = 5/110 (4%)
Frame = +2
Query: 50 ASASSLALSSFN-PKSLPFGVSRPASVSLLSPSLS---FKLNSDSVSFSIAAK-WNSPAS 214
ASASSL L S + PK+L +S+P SVS S S KL+S+S+S S +++ + + +S
Sbjct: 2 ASASSLVLPSLSLPKTL--AISKPTSVSFFSLPFSCSSLKLHSNSISLSPSSRGFLTLSS 59
Query: 215 RFARNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQL 364
RF RNVA++S++E +ED +D P SFS DLKLFVGNLPFNVDSA L
Sbjct: 60 RFVRNVAVSSDYEQDEDVLSDEGEP---SFSPDLKLFVGNLPFNVDSAGL 106
[7][TOP]
>UniRef100_B9MTC6 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9MTC6_POPTR
Length = 286
Score = 84.3 bits (207), Expect = 4e-15
Identities = 55/108 (50%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Frame = +2
Query: 47 AASASSLALSSFN-PKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSP-ASRF 220
A SASSL L S N P ++ S+P S+S LS S + + S+ S K P +SRF
Sbjct: 3 ATSASSLVLPSLNHPNTIKSFYSKPTSLSFLSLSSTSSIKPASLFLSFQQKQQQPLSSRF 62
Query: 221 ARNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQL 364
++VAI+SEF EED F D P SFS DL+LFVGNLPFNV+SAQL
Sbjct: 63 LKSVAISSEFGQEEDVFGDGDEP---SFSPDLQLFVGNLPFNVNSAQL 107
[8][TOP]
>UniRef100_B9S0K6 Ribonucleoprotein, chloroplast, putative n=1 Tax=Ricinus communis
RepID=B9S0K6_RICCO
Length = 280
Score = 79.0 bits (193), Expect = 2e-13
Identities = 58/118 (49%), Positives = 69/118 (58%), Gaps = 13/118 (11%)
Frame = +2
Query: 50 ASASSLALSSFNPKSLPFGVSRPASVSLLSP----SLSFKLNSDSVSFS---------IA 190
ASASSL L S NPK+L SL +P SLSFKL++ +S +
Sbjct: 4 ASASSLVLPSLNPKTL----------SLCNPNKPISLSFKLHAKPISIPSSLFSSFVPLQ 53
Query: 191 AKWNSPASRFARNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQL 364
+ S +SRF +VAI+SEF EED +D E SFS DLKLFVGNLPFNVDSAQL
Sbjct: 54 QQPYSSSSRFVPSVAISSEFGQEEDVSSD---GDESSFSQDLKLFVGNLPFNVDSAQL 108
[9][TOP]
>UniRef100_Q08935 29 kDa ribonucleoprotein A, chloroplastic n=1 Tax=Nicotiana
sylvestris RepID=ROC1_NICSY
Length = 273
Score = 68.6 bits (166), Expect = 2e-10
Identities = 41/107 (38%), Positives = 62/107 (57%)
Frame = +2
Query: 44 MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA 223
MA+SASSL S P++LP P S + F L S++ S+++ + +SRF
Sbjct: 1 MASSASSLHFLSLTPQTLPL----PKPTSQTTSLSFFSLPPSSLNLSLSSSSSCFSSRFV 56
Query: 224 RNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQL 364
R V ++ ++E+ D +E++FS DLK+FVGNLPF+ DSA L
Sbjct: 57 RKVTLSDFDQIEDVEDGDDGVEEERNFSPDLKIFVGNLPFSADSAAL 103
[10][TOP]
>UniRef100_Q41367 24 kDa RNA binding protein (Fragment) n=1 Tax=Spinacia oleracea
RepID=Q41367_SPIOL
Length = 220
Score = 63.5 bits (153), Expect = 7e-09
Identities = 32/54 (59%), Positives = 40/54 (74%)
Frame = +2
Query: 203 SPASRFARNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQL 364
S +S F R+V I+SEFE EED D ++ +FS DLK+FVGNLPFNVDSA+L
Sbjct: 1 SISSSFVRHVRISSEFEQEEDVMGDDDAGRQPNFSPDLKIFVGNLPFNVDSAEL 54
[11][TOP]
>UniRef100_Q8W214 Single-stranded DNA binding protein n=1 Tax=Solanum tuberosum
RepID=Q8W214_SOLTU
Length = 289
Score = 61.6 bits (148), Expect = 3e-08
Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Frame = +2
Query: 44 MAASASSLALSSFNPKSLPFGVSRPASVSLLS---PSLSFKLNSDSVSFSIAAKWNSPAS 214
MA+S+SSL S P++LP S+ S+S S SL+ L+S S N +S
Sbjct: 1 MASSSSSLHFLSLTPQTLPKPTSQTTSISFFSLPPSSLNLSLSSSSTPR------NFESS 54
Query: 215 RFARNVAITSEFEVEE----------DGFADV-APPKEQSFSADLKLFVGNLPFNVDSAQ 361
RF R V ++ ++EE G +D A +E++ + DLK+FVGNLPF+VDSA
Sbjct: 55 RFVRKVTLSDFDQIEEVEAGDDDEEEGGLSDEGASYEERNANPDLKIFVGNLPFSVDSAA 114
Query: 362 L 364
L
Sbjct: 115 L 115
[12][TOP]
>UniRef100_B7FKG8 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FKG8_MEDTR
Length = 280
Score = 61.6 bits (148), Expect = 3e-08
Identities = 45/107 (42%), Positives = 61/107 (57%)
Frame = +2
Query: 44 MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA 223
M+ SA+SL L S K+ P S S+SL F +S S+ S+ S + RF
Sbjct: 1 MSTSATSLVLPSLFTKNSPQCFSSLPSLSLNPNFKPFSFSSVSLRPSL-----SISHRFI 55
Query: 224 RNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQL 364
VA++SEF+ EED F D S+S + +LFVG+LPF+VDSAQL
Sbjct: 56 SRVAVSSEFDQEEDTFDD--GDDTPSYSPNQRLFVGSLPFSVDSAQL 100
[13][TOP]
>UniRef100_C6TEA3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TEA3_SOYBN
Length = 279
Score = 61.2 bits (147), Expect = 3e-08
Identities = 50/113 (44%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Frame = +2
Query: 44 MAASASSLALSSFNPKSLPFGVSRP-ASVSLLSPSLSFKLNSDSVSFSIA-----AKWNS 205
M+ SA+SLAL + L +P S S SLS NS +S S +S
Sbjct: 1 MSTSAASLALPT-----LTLRTRQPLCSPQCFSSSLSLTPNSKPISISAVFLKTTLSSSS 55
Query: 206 PASRFARNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQL 364
P S +R V S E EED F D P SFS DLKLFVGNLPF+VDSA+L
Sbjct: 56 PLSLSSRFVPHVSVLEQEEDTFGDGDGP---SFSRDLKLFVGNLPFSVDSARL 105
[14][TOP]
>UniRef100_P49313 30 kDa ribonucleoprotein, chloroplastic n=1 Tax=Nicotiana
plumbaginifolia RepID=ROC1_NICPL
Length = 279
Score = 61.2 bits (147), Expect = 3e-08
Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Frame = +2
Query: 44 MAASASSLALSSFNPKSL--PFGVSRPASVSLLS---PSLSFKLNSDSVSFSIAAKWNSP 208
MA+SASSL S P++L P S+ S+S S SL+ L+S S FS
Sbjct: 1 MASSASSLHFLSLTPQTLLLPKPTSQTTSLSFFSLPPSSLNLSLSSPSSCFS-------- 52
Query: 209 ASRFARNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQL 364
SRF R V + ++E+ D +E++FS DLK+FVGNL F+ DSA L
Sbjct: 53 -SRFVRKVTLPDFDQIEDVEDGDEGVEEERNFSPDLKIFVGNLLFSADSAAL 103
[15][TOP]
>UniRef100_C5X377 Putative uncharacterized protein Sb02g040260 n=1 Tax=Sorghum
bicolor RepID=C5X377_SORBI
Length = 268
Score = 56.2 bits (134), Expect = 1e-06
Identities = 40/103 (38%), Positives = 57/103 (55%)
Frame = +2
Query: 56 ASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFARNVA 235
A++L +S +P+ L ++PA+ + S L F+L +VS +P R VA
Sbjct: 2 AAALFSTSLSPRFLALSSAKPAAPAA-SAFLPFRLPLRAVS--------APGRRVFEPVA 52
Query: 236 ITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQL 364
+ E E +G A+ + FS DLKLFVGNLPF+VDSAQL
Sbjct: 53 VAVSSEYETEG-AEQEEEGAEEFSEDLKLFVGNLPFSVDSAQL 94
[16][TOP]
>UniRef100_B6U471 Ribonucleoprotein A n=1 Tax=Zea mays RepID=B6U471_MAIZE
Length = 268
Score = 56.2 bits (134), Expect = 1e-06
Identities = 38/103 (36%), Positives = 54/103 (52%)
Frame = +2
Query: 56 ASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFARNVA 235
A++L SS +P+ L +PA+ + + L F+L +VS +P R VA
Sbjct: 2 AAALFSSSLSPRFLALSSPKPAAPAATA-FLPFRLPPRAVS--------APGRRVFEPVA 52
Query: 236 ITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQL 364
+ E + +G + FS DLKLFVGNLPF+VDSAQL
Sbjct: 53 VAVSSEYKTEGAEQEGEDGSEEFSEDLKLFVGNLPFSVDSAQL 95
[17][TOP]
>UniRef100_P49314 31 kDa ribonucleoprotein, chloroplastic n=1 Tax=Nicotiana
plumbaginifolia RepID=ROC2_NICPL
Length = 292
Score = 56.2 bits (134), Expect = 1e-06
Identities = 43/108 (39%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Frame = +2
Query: 44 MAASASSLALSSFNPKSLPFGVSRPASVSLLS-PSLSFKLNSDSVSFSIAAKWNSPASRF 220
MA+S+ S F P + +++S S PS S L+ S S +A S F
Sbjct: 1 MASSSVSSLQFLFVTSQTPSSLKPNSTLSFFSLPSSSLNLSLSSSSIGHSASIKPFESSF 60
Query: 221 ARNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQL 364
+ VA+ S+F+ ED DV ++ FS DLKLFVGNLPF+VDSA L
Sbjct: 61 STRVAL-SDFDQLED---DVEVAEQPRFSEDLKLFVGNLPFSVDSAAL 104