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[1][TOP]
>UniRef100_Q9ZUU4 Ribonucleoprotein At2g37220, chloroplastic n=2 Tax=Arabidopsis
thaliana RepID=ROC1_ARATH
Length = 289
Score = 200 bits (509), Expect = 4e-50
Identities = 104/105 (99%), Positives = 104/105 (99%)
Frame = +1
Query: 31 MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA 210
MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA
Sbjct: 1 MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA 60
Query: 211 RNVAIISEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSA 345
RNVAI SEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSA
Sbjct: 61 RNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSA 105
[2][TOP]
>UniRef100_Q8L941 Putative RNA-binding protein n=1 Tax=Arabidopsis thaliana
RepID=Q8L941_ARATH
Length = 289
Score = 199 bits (505), Expect = 1e-49
Identities = 103/105 (98%), Positives = 103/105 (98%)
Frame = +1
Query: 31 MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA 210
MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRF
Sbjct: 1 MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFV 60
Query: 211 RNVAIISEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSA 345
RNVAI SEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSA
Sbjct: 61 RNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSA 105
[3][TOP]
>UniRef100_Q43349-2 Isoform 2 of 29 kDa ribonucleoprotein, chloroplastic n=1
Tax=Arabidopsis thaliana RepID=Q43349-2
Length = 334
Score = 119 bits (298), Expect = 1e-25
Identities = 77/115 (66%), Positives = 86/115 (74%), Gaps = 10/115 (8%)
Frame = +1
Query: 31 MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSD---SVSFSIAAKWNSPA- 198
M+ASASSL S+FNPKSLP VSRPASVS+L PSLSFKL+SD S+ S A K +SPA
Sbjct: 1 MSASASSL--SAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAE 58
Query: 199 --SRFARNVAIISEFEVEEDG-FA---DVAPPKEQSFSADLKLFVGNLPFNVDSA 345
SRF RNVA+ S+FEVEED FA D AP + SFS DLKLFVGNL FNVDSA
Sbjct: 59 YPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSA 113
[4][TOP]
>UniRef100_Q43349 29 kDa ribonucleoprotein, chloroplastic n=1 Tax=Arabidopsis
thaliana RepID=ROC2_ARATH
Length = 342
Score = 119 bits (298), Expect = 1e-25
Identities = 77/115 (66%), Positives = 86/115 (74%), Gaps = 10/115 (8%)
Frame = +1
Query: 31 MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSD---SVSFSIAAKWNSPA- 198
M+ASASSL S+FNPKSLP VSRPASVS+L PSLSFKL+SD S+ S A K +SPA
Sbjct: 1 MSASASSL--SAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAE 58
Query: 199 --SRFARNVAIISEFEVEEDG-FA---DVAPPKEQSFSADLKLFVGNLPFNVDSA 345
SRF RNVA+ S+FEVEED FA D AP + SFS DLKLFVGNL FNVDSA
Sbjct: 59 YPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSA 113
[5][TOP]
>UniRef100_B9IFN7 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IFN7_POPTR
Length = 273
Score = 86.7 bits (213), Expect = 7e-16
Identities = 56/105 (53%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Frame = +1
Query: 34 AASASSLALSSFN-PKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA 210
AASASSL L S N P ++ S+P S+ LSPS + L S+ S + +SRF
Sbjct: 3 AASASSLVLPSLNHPNTIKSFYSKPNSLFFLSPSSTSSLKPVSLLLSFQHQQQPLSSRFL 62
Query: 211 RNVAIISEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSA 345
+NVAI SEF EED +D EQSFS DLKLFVGNLPFNVDSA
Sbjct: 63 KNVAISSEFGQEEDFLSD---GDEQSFSQDLKLFVGNLPFNVDSA 104
[6][TOP]
>UniRef100_A7PT43 Chromosome chr8 scaffold_29, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PT43_VITVI
Length = 288
Score = 84.3 bits (207), Expect = 4e-15
Identities = 56/108 (51%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
Frame = +1
Query: 37 ASASSLALSSFN-PKSLPFGVSRPASVSLLSPSLS---FKLNSDSVSFSIAAK-WNSPAS 201
ASASSL L S + PK+L +S+P SVS S S KL+S+S+S S +++ + + +S
Sbjct: 2 ASASSLVLPSLSLPKTL--AISKPTSVSFFSLPFSCSSLKLHSNSISLSPSSRGFLTLSS 59
Query: 202 RFARNVAIISEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSA 345
RF RNVA+ S++E +ED +D P SFS DLKLFVGNLPFNVDSA
Sbjct: 60 RFVRNVAVSSDYEQDEDVLSDEGEP---SFSPDLKLFVGNLPFNVDSA 104
[7][TOP]
>UniRef100_B9MTC6 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9MTC6_POPTR
Length = 286
Score = 79.7 bits (195), Expect = 9e-14
Identities = 53/106 (50%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Frame = +1
Query: 34 AASASSLALSSFN-PKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSP-ASRF 207
A SASSL L S N P ++ S+P S+S LS S + + S+ S K P +SRF
Sbjct: 3 ATSASSLVLPSLNHPNTIKSFYSKPTSLSFLSLSSTSSIKPASLFLSFQQKQQQPLSSRF 62
Query: 208 ARNVAIISEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSA 345
++VAI SEF EED F D P SFS DL+LFVGNLPFNV+SA
Sbjct: 63 LKSVAISSEFGQEEDVFGDGDEP---SFSPDLQLFVGNLPFNVNSA 105
[8][TOP]
>UniRef100_B9S0K6 Ribonucleoprotein, chloroplast, putative n=1 Tax=Ricinus communis
RepID=B9S0K6_RICCO
Length = 280
Score = 74.3 bits (181), Expect = 4e-12
Identities = 56/116 (48%), Positives = 66/116 (56%), Gaps = 13/116 (11%)
Frame = +1
Query: 37 ASASSLALSSFNPKSLPFGVSRPASVSLLSP----SLSFKLNSDSVSFS---------IA 177
ASASSL L S NPK+L SL +P SLSFKL++ +S +
Sbjct: 4 ASASSLVLPSLNPKTL----------SLCNPNKPISLSFKLHAKPISIPSSLFSSFVPLQ 53
Query: 178 AKWNSPASRFARNVAIISEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSA 345
+ S +SRF +VAI SEF EED +D E SFS DLKLFVGNLPFNVDSA
Sbjct: 54 QQPYSSSSRFVPSVAISSEFGQEEDVSSD---GDESSFSQDLKLFVGNLPFNVDSA 106
[9][TOP]
>UniRef100_Q08935 29 kDa ribonucleoprotein A, chloroplastic n=1 Tax=Nicotiana
sylvestris RepID=ROC1_NICSY
Length = 273
Score = 66.2 bits (160), Expect = 1e-09
Identities = 40/105 (38%), Positives = 60/105 (57%)
Frame = +1
Query: 31 MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA 210
MA+SASSL S P++LP P S + F L S++ S+++ + +SRF
Sbjct: 1 MASSASSLHFLSLTPQTLPL----PKPTSQTTSLSFFSLPPSSLNLSLSSSSSCFSSRFV 56
Query: 211 RNVAIISEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSA 345
R V + ++E+ D +E++FS DLK+FVGNLPF+ DSA
Sbjct: 57 RKVTLSDFDQIEDVEDGDDGVEEERNFSPDLKIFVGNLPFSADSA 101
[10][TOP]
>UniRef100_Q8W214 Single-stranded DNA binding protein n=1 Tax=Solanum tuberosum
RepID=Q8W214_SOLTU
Length = 289
Score = 61.2 bits (147), Expect = 3e-08
Identities = 48/119 (40%), Positives = 65/119 (54%), Gaps = 14/119 (11%)
Frame = +1
Query: 31 MAASASSLALSSFNPKSLPFGVSRPASVSLLS---PSLSFKLNSDSVSFSIAAKWNSPAS 201
MA+S+SSL S P++LP S+ S+S S SL+ L+S S N +S
Sbjct: 1 MASSSSSLHFLSLTPQTLPKPTSQTTSISFFSLPPSSLNLSLSSSSTPR------NFESS 54
Query: 202 RFARNVAI-----ISEFEV-----EEDGFADV-APPKEQSFSADLKLFVGNLPFNVDSA 345
RF R V + I E E EE G +D A +E++ + DLK+FVGNLPF+VDSA
Sbjct: 55 RFVRKVTLSDFDQIEEVEAGDDDEEEGGLSDEGASYEERNANPDLKIFVGNLPFSVDSA 113
[11][TOP]
>UniRef100_C6TEA3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TEA3_SOYBN
Length = 279
Score = 60.5 bits (145), Expect = 6e-08
Identities = 49/111 (44%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Frame = +1
Query: 31 MAASASSLALSSFNPKSLPFGVSRP-ASVSLLSPSLSFKLNSDSVSFSIA-----AKWNS 192
M+ SA+SLAL + L +P S S SLS NS +S S +S
Sbjct: 1 MSTSAASLALPT-----LTLRTRQPLCSPQCFSSSLSLTPNSKPISISAVFLKTTLSSSS 55
Query: 193 PASRFARNVAIISEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSA 345
P S +R V +S E EED F D P SFS DLKLFVGNLPF+VDSA
Sbjct: 56 PLSLSSRFVPHVSVLEQEEDTFGDGDGP---SFSRDLKLFVGNLPFSVDSA 103
[12][TOP]
>UniRef100_Q41367 24 kDa RNA binding protein (Fragment) n=1 Tax=Spinacia oleracea
RepID=Q41367_SPIOL
Length = 220
Score = 60.1 bits (144), Expect = 7e-08
Identities = 31/52 (59%), Positives = 37/52 (71%)
Frame = +1
Query: 190 SPASRFARNVAIISEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSA 345
S +S F R+V I SEFE EED D ++ +FS DLK+FVGNLPFNVDSA
Sbjct: 1 SISSSFVRHVRISSEFEQEEDVMGDDDAGRQPNFSPDLKIFVGNLPFNVDSA 52
[13][TOP]
>UniRef100_P49313 30 kDa ribonucleoprotein, chloroplastic n=1 Tax=Nicotiana
plumbaginifolia RepID=ROC1_NICPL
Length = 279
Score = 59.3 bits (142), Expect = 1e-07
Identities = 44/110 (40%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Frame = +1
Query: 31 MAASASSLALSSFNPKSL--PFGVSRPASVSLLS---PSLSFKLNSDSVSFSIAAKWNSP 195
MA+SASSL S P++L P S+ S+S S SL+ L+S S FS
Sbjct: 1 MASSASSLHFLSLTPQTLLLPKPTSQTTSLSFFSLPPSSLNLSLSSPSSCFS-------- 52
Query: 196 ASRFARNVAIISEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSA 345
SRF R V + ++E+ D +E++FS DLK+FVGNL F+ DSA
Sbjct: 53 -SRFVRKVTLPDFDQIEDVEDGDEGVEEERNFSPDLKIFVGNLLFSADSA 101
[14][TOP]
>UniRef100_B7FKG8 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FKG8_MEDTR
Length = 280
Score = 57.0 bits (136), Expect = 6e-07
Identities = 43/105 (40%), Positives = 58/105 (55%)
Frame = +1
Query: 31 MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA 210
M+ SA+SL L S K+ P S S+SL F +S S+ S+ S + RF
Sbjct: 1 MSTSATSLVLPSLFTKNSPQCFSSLPSLSLNPNFKPFSFSSVSLRPSL-----SISHRFI 55
Query: 211 RNVAIISEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSA 345
VA+ SEF+ EED F D S+S + +LFVG+LPF+VDSA
Sbjct: 56 SRVAVSSEFDQEEDTFDD--GDDTPSYSPNQRLFVGSLPFSVDSA 98
[15][TOP]
>UniRef100_P49314 31 kDa ribonucleoprotein, chloroplastic n=1 Tax=Nicotiana
plumbaginifolia RepID=ROC2_NICPL
Length = 292
Score = 55.1 bits (131), Expect = 2e-06
Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Frame = +1
Query: 31 MAASASSLALSSFNPKSLPFGVSRPASVSLLS-PSLSFKLNSDSVSFSIAAKWNSPASRF 207
MA+S+ S F P + +++S S PS S L+ S S +A S F
Sbjct: 1 MASSSVSSLQFLFVTSQTPSSLKPNSTLSFFSLPSSSLNLSLSSSSIGHSASIKPFESSF 60
Query: 208 ARNVAIISEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSA 345
+ VA+ S+F+ ED DV ++ FS DLKLFVGNLPF+VDSA
Sbjct: 61 STRVAL-SDFDQLED---DVEVAEQPRFSEDLKLFVGNLPFSVDSA 102