AV527317 ( APZ34b05R )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV527317  APZ34b05R
         (264 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q9S7M0 Lhcb3 chlorophyll a/b binding protein n=1 Tax=A...   143   5e-33
UniRef100_Q42016 CHLOROPHYLL A-B BINDING PROTEIN (Fragment) n=1 ...   143   5e-33
UniRef100_Q42203 Complex II type III chlorophyll a/b binding pro...   138   2e-31
UniRef100_Q39339 LHC II Type III chlorophyll a /b binding protei...   134   2e-30
UniRef100_Q39340 LHC II Type III chlorophyll a/b binding protein...   125   1e-27
UniRef100_A7P1F1 Chromosome chr19 scaffold_4, whole genome shotg...   109   1e-22
UniRef100_Q9XQB1 LHCII type III chlorophyll a/b binding protein ...   105   2e-21
UniRef100_Q9SDT2 Chlorophyll a/b-binding protein n=1 Tax=Daucus ...   103   8e-21
UniRef100_B9SID9 Chlorophyll A/B binding protein, putative n=1 T...   103   8e-21
UniRef100_A6H5B7 Putative LHCII type III chlorophyll a/b binding...   103   8e-21
UniRef100_A7QYH5 Chromosome undetermined scaffold_247, whole gen...   101   2e-20
UniRef100_Q5I8X1 Light-harvesting chlorophyll-a/b binding protei...   101   2e-20
UniRef100_C6TKW2 Putative uncharacterized protein n=1 Tax=Glycin...   100   4e-20
UniRef100_A5BW14 Putative uncharacterized protein n=1 Tax=Vitis ...   100   4e-20
UniRef100_B9I013 Light-harvesting complex II protein Lhcb3 n=1 T...   100   5e-20
UniRef100_Q04918 Chlorophyll a/b-binding protein n=1 Tax=Pisum s...   100   9e-20
UniRef100_C6T868 Putative uncharacterized protein n=1 Tax=Glycin...    99   1e-19
UniRef100_A5BEB1 Putative uncharacterized protein n=1 Tax=Vitis ...    99   1e-19
UniRef100_B9N576 Light-harvesting complex II protein Lhcb3 n=1 T...    98   3e-19
UniRef100_B1P0S0 Chloroplast chlorophyll-a/b binding protein n=1...    97   4e-19
UniRef100_P27489 Chlorophyll a-b binding protein 13, chloroplast...    97   6e-19
UniRef100_C5XBK1 Putative uncharacterized protein Sb02g036380 n=...    89   1e-16
UniRef100_C5G6D5 Chloroplast chlorophyll a/b binding protein n=1...    89   1e-16
UniRef100_C5G6D4 Chloroplast chlorophyll a/b binding protein n=1...    89   1e-16
UniRef100_B7SAW4 Chloroplast chlorophyll a/b binding protein cab...    89   2e-16
UniRef100_B7SAW3 Chloroplast chlorophyll a/b binding protein cab...    89   2e-16
UniRef100_P27523 Chlorophyll a-b binding protein of LHCII type I...    87   6e-16
UniRef100_B6SUM9 Chlorophyll a-b binding protein of LHCII type I...    82   1e-14
UniRef100_A2YMN1 Putative uncharacterized protein n=1 Tax=Oryza ...    75   3e-12
UniRef100_Q6ZF30 Os07g0562700 protein n=1 Tax=Oryza sativa Japon...    74   7e-12
UniRef100_O22542 Chlorophyll a-b binding protein n=1 Tax=Oryza s...    72   3e-11
UniRef100_A9PJV4 Putative uncharacterized protein n=1 Tax=Populu...    63   1e-08
UniRef100_B9RN67 Chlorophyll A/B binding protein, putative n=1 T...    62   3e-08
UniRef100_Q3LFQ5 Chlorophyll a/b binding protein n=1 Tax=Panax g...    61   3e-08
UniRef100_D0F1Q5 Chlorophyll A/B binding protein n=1 Tax=Jatroph...    61   3e-08
UniRef100_B9T0C1 Chlorophyll A/B binding protein, putative n=1 T...    61   3e-08
UniRef100_Q84TM7 Chlorophyll a/b binding protein n=1 Tax=Nicotia...    61   4e-08
UniRef100_O82425 Light harvesting chlorophyll A/B binding protei...    61   4e-08
UniRef100_B9IAR5 Light-harvesting complex II protein Lhcb2 n=1 T...    60   6e-08
UniRef100_A5ASG6 Chromosome chr12 scaffold_47, whole genome shot...    60   8e-08
UniRef100_Q945D1 Putative chlorophyll-A-B-binding protein (Fragm...    60   1e-07
UniRef100_Q39341 LHCII Type III chlorophyll a/b binding protein ...    59   1e-07
UniRef100_A9PJH7 Putative uncharacterized protein n=1 Tax=Populu...    59   2e-07
UniRef100_A9PFW7 Light-harvesting complex II protein Lhcb2 n=1 T...    59   2e-07
UniRef100_B6STN4 Chlorophyll a-b binding protein 2 n=1 Tax=Zea m...    59   2e-07
UniRef100_P12062 Chlorophyll a-b binding protein 37, chloroplast...    59   2e-07
UniRef100_P12329 Chlorophyll a-b binding protein 1, chloroplasti...    59   2e-07
UniRef100_B1PL36 Chloroplast photosystem II type I chlorophyll A...    58   3e-07
UniRef100_Q8LK17 A-B binding protein (Fragment) n=1 Tax=Vicia fa...    57   5e-07
UniRef100_Q38713 Chlorophyll a/b binding protein n=1 Tax=Amarant...    57   5e-07
UniRef100_Q1EP00 Chlorophyll A-B binding protein (CAB), putative...    57   8e-07
UniRef100_B9GSZ2 Predicted protein n=1 Tax=Populus trichocarpa R...    57   8e-07
UniRef100_P27490 Chlorophyll a-b binding protein 8, chloroplasti...    57   8e-07
UniRef100_Q9XF86 Lhcb2 protein n=1 Tax=Arabidopsis thaliana RepI...    56   1e-06
UniRef100_Q9SHR7 Putative chlorophyll a/b binding protein n=1 Ta...    56   1e-06
UniRef100_B7FHZ5 Putative uncharacterized protein n=1 Tax=Medica...    56   1e-06
UniRef100_B1PL35 Chloroplast photosystem II type I chlorophyll A...    56   1e-06
UniRef100_A4F3R4 Major chlorophyll a/b binding protein LHCb1.1 n...    56   1e-06
UniRef100_P12333 Chlorophyll a-b binding protein, chloroplastic ...    56   1e-06
UniRef100_P27494 Chlorophyll a-b binding protein 36, chloroplast...    56   1e-06
UniRef100_Q9SYW9 Lhcb2 protein n=1 Tax=Arabidopsis thaliana RepI...    56   1e-06
UniRef100_Q93YG3 Chlorophyll a/b binding protein type II n=1 Tax...    56   1e-06
UniRef100_C5X7M3 Putative uncharacterized protein Sb02g032040 n=...    56   1e-06
UniRef100_Q9S7J7 Putative chlorophyll a/b binding protein n=1 Ta...    55   2e-06
UniRef100_Q677H3 Chloroplast chlorophyll A-B binding protein (Fr...    55   2e-06
UniRef100_Q5ZF93 Light harvesting protein 1 (Fragment) n=1 Tax=P...    55   2e-06
UniRef100_Q41449 Chlorophyll a,b binding protein type I n=1 Tax=...    55   2e-06
UniRef100_C0PAQ4 Putative uncharacterized protein n=1 Tax=Zea ma...    55   2e-06
UniRef100_B6T1H1 Chlorophyll a-b binding protein n=1 Tax=Zea may...    55   2e-06
UniRef100_A3FPF0 Chlorophyll a/b-binding protein n=1 Tax=Nelumbo...    55   2e-06
UniRef100_P07371 Chlorophyll a-b binding protein AB80, chloropla...    55   2e-06
UniRef100_Q677D0 Chloroplast chlorophyll A-B binding protein 40 ...    55   3e-06
UniRef100_Q43437 Photosystem II type I chlorophyll a/b-binding p...    55   3e-06
UniRef100_A4F3R3 Major chlorophyll a/b binding protein LHCb1.2 n...    55   3e-06
UniRef100_P09755 Chlorophyll a-b binding protein 2, chloroplasti...    55   3e-06
UniRef100_P12332 Chlorophyll a-b binding protein, chloroplastic ...    55   3e-06
UniRef100_Q40185 Light-harvesting chlorophyll a/b protein n=1 Ta...    54   4e-06
UniRef100_O64447 Light harvesting chlorophyll a/b-binding protei...    54   4e-06
UniRef100_C4TNZ9 Chlorophyll a/b binding protein n=1 Tax=Vicia c...    54   4e-06
UniRef100_P14278 Chlorophyll a-b binding protein 4, chloroplasti...    54   4e-06
UniRef100_Q9ZP08 Chlorophyll a/b binding protein n=1 Tax=Cicer a...    54   5e-06
UniRef100_Q2XTE0 Chlorophyll a-b binding protein 3C-like n=1 Tax...    54   5e-06
UniRef100_C6T8R7 Putative uncharacterized protein n=1 Tax=Glycin...    54   5e-06
UniRef100_C5WTC1 Putative uncharacterized protein Sb01g015400 n=...    54   5e-06
UniRef100_A9RT62 Predicted protein n=1 Tax=Physcomitrella patens...    54   5e-06
UniRef100_Q9M600 Chlorophyll a/b binding protein n=1 Tax=Euphorb...    54   7e-06
UniRef100_Q19UF9 Chloroplast chlorophyll a/b binding protein n=1...    54   7e-06
UniRef100_B6SZT9 Chlorophyll a-b binding protein n=1 Tax=Zea may...    54   7e-06
UniRef100_A9NPD6 Putative uncharacterized protein n=1 Tax=Picea ...    54   7e-06
UniRef100_P27520 Chlorophyll a-b binding protein 215, chloroplas...    54   7e-06
UniRef100_Q1KLZ3 Putative chloroplast chlorophyll a/b-binding pr...    53   9e-06
UniRef100_Q1A179 Chloroplast chlorophyll a/b binding protein n=1...    53   9e-06
UniRef100_B9S155 Chlorophyll A/B binding protein, putative n=1 T...    53   9e-06
graphical overview:
alignment
UniRef100_Q9S7M0 UniRef100_Q9S7M0 UniRef100_Q42016 UniRef100_Q42016 UniRef100_Q42203 UniRef100_Q42203 UniRef100_Q39339 UniRef100_Q39339 UniRef100_Q39340 UniRef100_Q39340 UniRef100_A7P1F1 UniRef100_A7P1F1 UniRef100_Q9XQB1 UniRef100_Q9XQB1 UniRef100_Q9SDT2 UniRef100_Q9SDT2 UniRef100_B9SID9 UniRef100_B9SID9 UniRef100_A6H5B7 UniRef100_A6H5B7 UniRef100_A7QYH5 UniRef100_A7QYH5 UniRef100_Q5I8X1 UniRef100_Q5I8X1 UniRef100_C6TKW2 UniRef100_C6TKW2 UniRef100_A5BW14 UniRef100_A5BW14 UniRef100_B9I013 UniRef100_B9I013 UniRef100_Q04918 UniRef100_Q04918 UniRef100_C6T868 UniRef100_C6T868 UniRef100_A5BEB1 UniRef100_A5BEB1 UniRef100_B9N576 UniRef100_B9N576 UniRef100_B1P0S0 UniRef100_B1P0S0 UniRef100_P27489 UniRef100_P27489 UniRef100_C5XBK1 UniRef100_C5XBK1 UniRef100_C5G6D5 UniRef100_C5G6D5 UniRef100_C5G6D4 UniRef100_C5G6D4 UniRef100_B7SAW4 UniRef100_B7SAW4 UniRef100_B7SAW3 UniRef100_B7SAW3 UniRef100_P27523 UniRef100_P27523 UniRef100_B6SUM9 UniRef100_B6SUM9 UniRef100_A2YMN1 UniRef100_A2YMN1 UniRef100_Q6ZF30 UniRef100_Q6ZF30 UniRef100_O22542 UniRef100_O22542 UniRef100_A9PJV4 UniRef100_A9PJV4 UniRef100_B9RN67 UniRef100_B9RN67 UniRef100_Q3LFQ5 UniRef100_Q3LFQ5 UniRef100_D0F1Q5 UniRef100_D0F1Q5 UniRef100_B9T0C1 UniRef100_B9T0C1 UniRef100_Q84TM7 UniRef100_Q84TM7 UniRef100_O82425 UniRef100_O82425 UniRef100_B9IAR5 UniRef100_B9IAR5 UniRef100_A5ASG6 UniRef100_A5ASG6 UniRef100_Q945D1 UniRef100_Q945D1 UniRef100_Q39341 UniRef100_Q39341 UniRef100_A9PJH7 UniRef100_A9PJH7 UniRef100_A9PFW7 UniRef100_A9PFW7 UniRef100_B6STN4 UniRef100_B6STN4 UniRef100_P12062 UniRef100_P12062 UniRef100_P12329 UniRef100_P12329 UniRef100_B1PL36 UniRef100_B1PL36 UniRef100_Q8LK17 UniRef100_Q8LK17 UniRef100_Q38713 UniRef100_Q38713 UniRef100_Q1EP00 UniRef100_Q1EP00 UniRef100_B9GSZ2 UniRef100_B9GSZ2 UniRef100_P27490 UniRef100_P27490 UniRef100_Q9XF86 UniRef100_Q9XF86 UniRef100_Q9SHR7 UniRef100_Q9SHR7 UniRef100_B7FHZ5 UniRef100_B7FHZ5 UniRef100_B1PL35 UniRef100_B1PL35 UniRef100_A4F3R4 UniRef100_A4F3R4 UniRef100_P12333 UniRef100_P12333 UniRef100_P27494 UniRef100_P27494 UniRef100_Q9SYW9 UniRef100_Q9SYW9 UniRef100_Q93YG3 UniRef100_Q93YG3 UniRef100_C5X7M3 UniRef100_C5X7M3 UniRef100_Q9S7J7 UniRef100_Q9S7J7 UniRef100_Q677H3 UniRef100_Q677H3 UniRef100_Q5ZF93 UniRef100_Q5ZF93 UniRef100_Q41449 UniRef100_Q41449 UniRef100_C0PAQ4 UniRef100_C0PAQ4 UniRef100_B6T1H1 UniRef100_B6T1H1 UniRef100_A3FPF0 UniRef100_A3FPF0 UniRef100_P07371 UniRef100_P07371 UniRef100_Q677D0 UniRef100_Q677D0 UniRef100_Q43437 UniRef100_Q43437 UniRef100_A4F3R3 UniRef100_A4F3R3 UniRef100_P09755 UniRef100_P09755 UniRef100_P12332 UniRef100_P12332 UniRef100_Q40185 UniRef100_Q40185 UniRef100_O64447 UniRef100_O64447 UniRef100_C4TNZ9 UniRef100_C4TNZ9 UniRef100_P14278 UniRef100_P14278 UniRef100_Q9ZP08 UniRef100_Q9ZP08 UniRef100_Q2XTE0 UniRef100_Q2XTE0 UniRef100_C6T8R7 UniRef100_C6T8R7 UniRef100_C5WTC1 UniRef100_C5WTC1 UniRef100_A9RT62 UniRef100_A9RT62 UniRef100_Q9M600 UniRef100_Q9M600 UniRef100_Q19UF9 UniRef100_Q19UF9 UniRef100_B6SZT9 UniRef100_B6SZT9 UniRef100_A9NPD6 UniRef100_A9NPD6 UniRef100_P27520 UniRef100_P27520 UniRef100_Q1KLZ3 UniRef100_Q1KLZ3 UniRef100_Q1A179 UniRef100_Q1A179