AV526156 ( APZ06a11R )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV526156  APZ06a11R
         (370 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q39194 Photosystem II reaction center W protein, chlor...   192   1e-47
UniRef100_A1YMY4 Component of 6.1 kDa polypeptide of photosystem...   182   1e-44
UniRef100_Q41908 Photosystem II 7kD protein n=1 Tax=Arabidopsis ...   174   2e-42
UniRef100_C6SWM3 Putative uncharacterized protein n=1 Tax=Glycin...   100   5e-20
UniRef100_C6SYI0 Putative uncharacterized protein n=1 Tax=Glycin...   100   7e-20
UniRef100_A9PEP9 Putative uncharacterized protein n=1 Tax=Populu...    98   3e-19
UniRef100_B9GS65 Putative uncharacterized protein n=1 Tax=Populu...    96   2e-18
UniRef100_C6SWZ8 Putative uncharacterized protein n=1 Tax=Glycin...    95   3e-18
UniRef100_C6T2W3 Putative uncharacterized protein n=1 Tax=Glycin...    94   4e-18
UniRef100_A9PJA9 Putative uncharacterized protein n=1 Tax=Populu...    94   5e-18
UniRef100_A7QVP6 Chromosome chr14 scaffold_190, whole genome sho...    92   1e-17
UniRef100_Q41387 Photosystem II reaction center W protein, chlor...    92   2e-17
UniRef100_A7PUM2 Chromosome chr7 scaffold_31, whole genome shotg...    90   7e-17
UniRef100_B7FHC2 Putative uncharacterized protein n=1 Tax=Medica...    84   4e-15
UniRef100_B9S4T1 Photosystem II reaction center W protein, chlor...    82   2e-14
UniRef100_B9SZ65 Photosystem II reaction center W protein, chlor...    80   7e-14
UniRef100_Q8W536 Photosystem II reaction center (Fragment) n=1 T...    77   5e-13
UniRef100_C5XLL1 Putative uncharacterized protein Sb03g036090 n=...    75   2e-12
UniRef100_B4FUI4 Photosystem II reaction center W protein n=1 Ta...    75   2e-12
UniRef100_B6TM37 Photosystem II reaction center W protein n=1 Ta...    75   3e-12
UniRef100_B6T2W4 Photosystem II reaction center W protein n=1 Ta...    75   3e-12
UniRef100_B6SMK2 Photosystem II reaction center W protein n=1 Ta...    72   1e-11
UniRef100_Q5ZBY9 Photosystem II reaction center W protein, chlor...    70   9e-11
UniRef100_B9ET99 Putative uncharacterized protein n=1 Tax=Oryza ...    61   3e-08
UniRef100_Q9AXN8 PSII subunit PsbW (Fragment) n=1 Tax=Physcomitr...    58   3e-07
UniRef100_A5C3A9 Putative uncharacterized protein n=1 Tax=Vitis ...    58   3e-07
UniRef100_A9SEQ6 Predicted protein (Fragment) n=1 Tax=Physcomitr...    58   4e-07
UniRef100_Q9AXP0 PSII subunit PsbW (Fragment) n=1 Tax=Physcomitr...    57   8e-07
UniRef100_B6TMB3 Photosystem II reaction center W protein n=1 Ta...    56   1e-06
graphical overview:
alignment
UniRef100_Q39194 UniRef100_Q39194 UniRef100_A1YMY4 UniRef100_A1YMY4 UniRef100_Q41908 UniRef100_Q41908 UniRef100_C6SWM3 UniRef100_C6SWM3 UniRef100_C6SYI0 UniRef100_C6SYI0 UniRef100_A9PEP9 UniRef100_A9PEP9 UniRef100_B9GS65 UniRef100_B9GS65 UniRef100_C6SWZ8 UniRef100_C6SWZ8 UniRef100_C6T2W3 UniRef100_C6T2W3 UniRef100_A9PJA9 UniRef100_A9PJA9 UniRef100_A7QVP6 UniRef100_A7QVP6 UniRef100_Q41387 UniRef100_Q41387 UniRef100_A7PUM2 UniRef100_A7PUM2 UniRef100_B7FHC2 UniRef100_B7FHC2 UniRef100_B9S4T1 UniRef100_B9S4T1 UniRef100_B9SZ65 UniRef100_B9SZ65 UniRef100_Q8W536 UniRef100_Q8W536 UniRef100_C5XLL1 UniRef100_C5XLL1 UniRef100_B4FUI4 UniRef100_B4FUI4 UniRef100_B6TM37 UniRef100_B6TM37 UniRef100_B6T2W4 UniRef100_B6T2W4 UniRef100_B6SMK2 UniRef100_B6SMK2 UniRef100_Q5ZBY9 UniRef100_Q5ZBY9 UniRef100_B9ET99 UniRef100_B9ET99 UniRef100_Q9AXN8 UniRef100_Q9AXN8 UniRef100_A5C3A9 UniRef100_A5C3A9 UniRef100_A9SEQ6 UniRef100_A9SEQ6 UniRef100_Q9AXP0 UniRef100_Q9AXP0