AV525883 ( APD31h01R )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV525883  APD31h01R
         (338 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q9LMQ2 F7H2.16 protein n=1 Tax=Arabidopsis thaliana Re...   151   2e-35
UniRef100_Q9XF90 Lhcb6 protein n=1 Tax=Arabidopsis thaliana RepI...   150   3e-35
UniRef100_Q6DV17 Lhcb6 protein (Fragment) n=1 Tax=Brassica rapa ...   128   2e-28
UniRef100_C6T0J3 Putative uncharacterized protein (Fragment) n=1...    96   2e-18
UniRef100_Q9XQB6 Chlorophyll a/b-binding protein CP24 n=1 Tax=Vi...    95   3e-18
UniRef100_C6T4E5 Putative uncharacterized protein n=1 Tax=Glycin...    94   4e-18
UniRef100_B9T5J6 Chlorophyll A/B binding protein, putative n=1 T...    94   4e-18
UniRef100_A9PFP4 Light-harvesting complex II protein Lhcb6 n=1 T...    94   6e-18
UniRef100_A9PGD4 Light-harvesting complex II protein Lhcb6 n=2 T...    93   8e-18
UniRef100_C6TLI1 Putative uncharacterized protein n=1 Tax=Glycin...    92   2e-17
UniRef100_P36494 Chlorophyll a-b binding protein CP24, chloropla...    90   9e-17
UniRef100_Q0PWS6 Chloroplast pigment-binding protein CP24 n=1 Ta...    86   1e-15
UniRef100_A5ASW8 Chromosome chr12 scaffold_238, whole genome sho...    86   1e-15
UniRef100_P27525 Chlorophyll a-b binding protein CP24 10B, chlor...    83   1e-14
UniRef100_P27524 Chlorophyll a-b binding protein CP24 10A, chlor...    77   6e-13
UniRef100_A0MEI5 Putative uncharacterized protein (Fragment) n=2...    71   4e-11
UniRef100_Q9SI55 Putative cold-regulated protein n=1 Tax=Arabido...    69   2e-10
UniRef100_B3VV82 Chloroplast light-harvesting complex II protein...    66   1e-09
UniRef100_B3VV73 Chloroplast light-harvesting complex II protein...    66   1e-09
UniRef100_B3VV84 Chloroplast light-harvesting complex II protein...    64   4e-09
UniRef100_B3VV83 Chloroplast light-harvesting complex II protein...    64   4e-09
UniRef100_B3VV80 Chloroplast light-harvesting complex II protein...    64   4e-09
UniRef100_B3VV74 Chloroplast light-harvesting complex II protein...    64   4e-09
UniRef100_B3VV72 Chloroplast light-harvesting complex II protein...    64   4e-09
UniRef100_B3VV93 Chloroplast light-harvesting complex II protein...    63   1e-08
UniRef100_Q41212 Low-temperature-regulated transcript protein n=...    59   2e-07
UniRef100_Q9SIN5 Cold-regulated protein cor15 n=2 Tax=Magnolioph...    57   8e-07
UniRef100_Q1G332 Cold-regulated protein n=1 Tax=Brassica rapa su...    56   1e-06
UniRef100_Q5MY94 Cold-regulated protein n=1 Tax=Brassica napus R...    55   2e-06
UniRef100_Q3S1Y5 Cold-regulated protein n=1 Tax=Brassica rapa su...    55   2e-06
UniRef100_B8PYF9 Chloroplast a/b binding protein cab-PhE11 n=1 T...    55   2e-06
UniRef100_A9UHM1 Cold response protein n=1 Tax=Eutrema salsugine...    54   4e-06
UniRef100_A9RU32 Predicted protein n=1 Tax=Physcomitrella patens...    54   5e-06
UniRef100_Q39058 Cor15b protein n=1 Tax=Arabidopsis thaliana Rep...    53   9e-06
graphical overview:
alignment
UniRef100_Q9LMQ2 UniRef100_Q9LMQ2 UniRef100_Q9XF90 UniRef100_Q9XF90 UniRef100_Q6DV17 UniRef100_Q6DV17 UniRef100_C6T0J3 UniRef100_C6T0J3 UniRef100_Q9XQB6 UniRef100_Q9XQB6 UniRef100_C6T4E5 UniRef100_C6T4E5 UniRef100_B9T5J6 UniRef100_B9T5J6 UniRef100_A9PFP4 UniRef100_A9PFP4 UniRef100_A9PGD4 UniRef100_A9PGD4 UniRef100_C6TLI1 UniRef100_C6TLI1 UniRef100_P36494 UniRef100_P36494 UniRef100_Q0PWS6 UniRef100_Q0PWS6 UniRef100_A5ASW8 UniRef100_A5ASW8 UniRef100_P27525 UniRef100_P27525 UniRef100_P27524 UniRef100_P27524 UniRef100_A0MEI5 UniRef100_A0MEI5 UniRef100_Q9SI55 UniRef100_Q9SI55 UniRef100_B3VV82 UniRef100_B3VV82 UniRef100_B3VV73 UniRef100_B3VV73 UniRef100_B3VV84 UniRef100_B3VV84 UniRef100_B3VV83 UniRef100_B3VV83 UniRef100_B3VV80 UniRef100_B3VV80 UniRef100_B3VV74 UniRef100_B3VV74 UniRef100_B3VV72 UniRef100_B3VV72 UniRef100_B3VV93 UniRef100_B3VV93 UniRef100_Q41212 UniRef100_Q41212 UniRef100_Q9SIN5 UniRef100_Q9SIN5 UniRef100_Q1G332 UniRef100_Q1G332 UniRef100_Q5MY94 UniRef100_Q5MY94 UniRef100_Q3S1Y5 UniRef100_Q3S1Y5 UniRef100_B8PYF9 UniRef100_B8PYF9 UniRef100_A9UHM1 UniRef100_A9UHM1 UniRef100_A9RU32 UniRef100_A9RU32