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[1][TOP]
>UniRef100_Q43349-2 Isoform 2 of 29 kDa ribonucleoprotein, chloroplastic n=1
Tax=Arabidopsis thaliana RepID=Q43349-2
Length = 334
Score = 219 bits (557), Expect = 1e-55
Identities = 111/111 (100%), Positives = 111/111 (100%)
Frame = +2
Query: 44 MSASASSLSAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAEYP 223
MSASASSLSAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAEYP
Sbjct: 1 MSASASSLSAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAEYP 60
Query: 224 SRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVD 376
SRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVD
Sbjct: 61 SRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVD 111
[2][TOP]
>UniRef100_Q43349 29 kDa ribonucleoprotein, chloroplastic n=1 Tax=Arabidopsis
thaliana RepID=ROC2_ARATH
Length = 342
Score = 219 bits (557), Expect = 1e-55
Identities = 111/111 (100%), Positives = 111/111 (100%)
Frame = +2
Query: 44 MSASASSLSAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAEYP 223
MSASASSLSAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAEYP
Sbjct: 1 MSASASSLSAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAEYP 60
Query: 224 SRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVD 376
SRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVD
Sbjct: 61 SRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVD 111
[3][TOP]
>UniRef100_Q8L941 Putative RNA-binding protein n=1 Tax=Arabidopsis thaliana
RepID=Q8L941_ARATH
Length = 289
Score = 120 bits (301), Expect = 5e-26
Identities = 74/113 (65%), Positives = 86/113 (76%)
Frame = +2
Query: 38 LAMSASASSLSAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAE 217
+A SAS+ +LS+FNPKSLP VSRPASVS+L PSLSFKL+SD S+ S A K +SPA
Sbjct: 1 MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSD---SVSFSIAAKWNSPA- 56
Query: 218 YPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVD 376
SRFVRNVA++S+FEVEED FA D AP + SFS DLKLFVGNL FNVD
Sbjct: 57 --SRFVRNVAITSEFEVEEDG-FA---DVAPPKEQSFSADLKLFVGNLPFNVD 103
[4][TOP]
>UniRef100_Q9ZUU4 Ribonucleoprotein At2g37220, chloroplastic n=2 Tax=Arabidopsis
thaliana RepID=ROC1_ARATH
Length = 289
Score = 119 bits (297), Expect = 1e-25
Identities = 73/113 (64%), Positives = 85/113 (75%)
Frame = +2
Query: 38 LAMSASASSLSAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAE 217
+A SAS+ +LS+FNPKSLP VSRPASVS+L PSLSFKL+SD S+ S A K +SPA
Sbjct: 1 MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSD---SVSFSIAAKWNSPA- 56
Query: 218 YPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVD 376
SRF RNVA++S+FEVEED FA D AP + SFS DLKLFVGNL FNVD
Sbjct: 57 --SRFARNVAITSEFEVEEDG-FA---DVAPPKEQSFSADLKLFVGNLPFNVD 103
[5][TOP]
>UniRef100_B9S0K6 Ribonucleoprotein, chloroplast, putative n=1 Tax=Ricinus communis
RepID=B9S0K6_RICCO
Length = 280
Score = 77.8 bits (190), Expect = 4e-13
Identities = 53/113 (46%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Frame = +2
Query: 47 SASASSLSAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLV---SIFASSALKCSSPAE 217
SAS+ L + NPK+L LC P SLSFKLH+ + S+F+S P
Sbjct: 5 SASSLVLPSLNPKTLSLCNPNK------PISLSFKLHAKPISIPSSLFSSFVPLQQQPYS 58
Query: 218 YPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVD 376
SRFV +VA+SS+F +E+D+ +DGD+S SFS DLKLFVGNL FNVD
Sbjct: 59 SSSRFVPSVAISSEFG-QEEDVSSDGDES------SFSQDLKLFVGNLPFNVD 104
[6][TOP]
>UniRef100_A7PT43 Chromosome chr8 scaffold_29, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PT43_VITVI
Length = 288
Score = 72.8 bits (177), Expect = 1e-11
Identities = 58/114 (50%), Positives = 68/114 (59%), Gaps = 5/114 (4%)
Frame = +2
Query: 50 ASASSLSAFNPKSLP--LCVSRPASVSV--LPPSLS-FKLHSDHLVSIFASSALKCSSPA 214
ASASSL SLP L +S+P SVS LP S S KLHS+ + +S S
Sbjct: 2 ASASSL-VLPSLSLPKTLAISKPTSVSFFSLPFSCSSLKLHSNSISLSPSSRGFLTLS-- 58
Query: 215 EYPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVD 376
SRFVRNVAVSSD+E +ED + +G+ S FSPDLKLFVGNL FNVD
Sbjct: 59 ---SRFVRNVAVSSDYEQDEDVLSDEGEPS-------FSPDLKLFVGNLPFNVD 102
[7][TOP]
>UniRef100_B9MTC6 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9MTC6_POPTR
Length = 286
Score = 66.6 bits (161), Expect = 8e-10
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Frame = +2
Query: 41 AMSASASSLSAFN-PKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAE 217
A SAS+ L + N P ++ S+P S+S L S + + S+F S K P
Sbjct: 3 ATSASSLVLPSLNHPNTIKSFYSKPTSLSFLSLSSTSSIKP---ASLFLSFQQKQQQPLS 59
Query: 218 YPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVD 376
SRF+++VA+SS+F +E+D+F DGD+ SFSPDL+LFVGNL FNV+
Sbjct: 60 --SRFLKSVAISSEFG-QEEDVFGDGDEP------SFSPDLQLFVGNLPFNVN 103
[8][TOP]
>UniRef100_B9IFN7 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IFN7_POPTR
Length = 273
Score = 66.2 bits (160), Expect = 1e-09
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Frame = +2
Query: 47 SASASSL---SAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAE 217
+ASASSL S +P ++ S+P S+ L PS + L L+ F SS
Sbjct: 3 AASASSLVLPSLNHPNTIKSFYSKPNSLFFLSPSSTSSLKPVSLLLSFQHQQQPLSS--- 59
Query: 218 YPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVD 376
RF++NVA+SS+F +E+D +DGD+ SFS DLKLFVGNL FNVD
Sbjct: 60 ---RFLKNVAISSEFG-QEEDFLSDGDEQ------SFSQDLKLFVGNLPFNVD 102
[9][TOP]
>UniRef100_Q08935 29 kDa ribonucleoprotein A, chloroplastic n=1 Tax=Nicotiana
sylvestris RepID=ROC1_NICSY
Length = 273
Score = 63.5 bits (153), Expect = 7e-09
Identities = 51/113 (45%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Frame = +2
Query: 44 MSASASSLS--AFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAE 217
M++SASSL + P++LPL +P S + SLSF +++ SS+ C S
Sbjct: 1 MASSASSLHFLSLTPQTLPL--PKPTSQTT---SLSFFSLPPSSLNLSLSSSSSCFS--- 52
Query: 218 YPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVD 376
SRFVR V +S DF+ ED DGDD ERN FSPDLK+FVGNL F+ D
Sbjct: 53 --SRFVRKVTLS-DFDQIED--VEDGDDGVEEERN-FSPDLKIFVGNLPFSAD 99
[10][TOP]
>UniRef100_Q41367 24 kDa RNA binding protein (Fragment) n=1 Tax=Spinacia oleracea
RepID=Q41367_SPIOL
Length = 220
Score = 58.5 bits (140), Expect = 2e-07
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 224 SRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVD 376
S FVR+V +SS+FE EED M GDD A + N FSPDLK+FVGNL FNVD
Sbjct: 4 SSFVRHVRISSEFEQEEDVM---GDDDAGRQPN-FSPDLKIFVGNLPFNVD 50
[11][TOP]
>UniRef100_C6TEA3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TEA3_SOYBN
Length = 279
Score = 58.5 bits (140), Expect = 2e-07
Identities = 46/118 (38%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Frame = +2
Query: 44 MSASASSLS-------AFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKC 202
MS SA+SL+ P P C S +S+S+ P S + + +F + L
Sbjct: 1 MSTSAASLALPTLTLRTRQPLCSPQCFS--SSLSLTPNSKPISISA-----VFLKTTLSS 53
Query: 203 SSPAEYPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVD 376
SSP SRFV +V+V +E+D F DGD SFS DLKLFVGNL F+VD
Sbjct: 54 SSPLSLSSRFVPHVSVLE----QEEDTFGDGDGP------SFSRDLKLFVGNLPFSVD 101
[12][TOP]
>UniRef100_B7FKG8 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FKG8_MEDTR
Length = 280
Score = 58.2 bits (139), Expect = 3e-07
Identities = 47/114 (41%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Frame = +2
Query: 44 MSASASSL---SAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPA 214
MS SA+SL S F K+ P C S S+S+ P +FK S VS+ S ++
Sbjct: 1 MSTSATSLVLPSLFT-KNSPQCFSSLPSLSLNP---NFKPFSFSSVSLRPSLSIS----- 51
Query: 215 EYPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVD 376
RF+ VAVSS+F+ +E+D F DGDD+ S+SP+ +LFVG+L F+VD
Sbjct: 52 ---HRFISRVAVSSEFD-QEEDTFDDGDDTP-----SYSPNQRLFVGSLPFSVD 96
[13][TOP]
>UniRef100_P49313 30 kDa ribonucleoprotein, chloroplastic n=1 Tax=Nicotiana
plumbaginifolia RepID=ROC1_NICPL
Length = 279
Score = 57.4 bits (137), Expect = 5e-07
Identities = 46/111 (41%), Positives = 60/111 (54%)
Frame = +2
Query: 44 MSASASSLSAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAEYP 223
M++SASSL + L + +P S + SLSF +++ SS C S
Sbjct: 1 MASSASSLHFLSLTPQTLLLPKPTSQTT---SLSFFSLPPSSLNLSLSSPSSCFS----- 52
Query: 224 SRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVD 376
SRFVR V + DF+ ED DGD+ ERN FSPDLK+FVGNL F+ D
Sbjct: 53 SRFVRKVTLP-DFDQIED--VEDGDEGVEEERN-FSPDLKIFVGNLLFSAD 99
[14][TOP]
>UniRef100_Q8W214 Single-stranded DNA binding protein n=1 Tax=Solanum tuberosum
RepID=Q8W214_SOLTU
Length = 289
Score = 56.2 bits (134), Expect = 1e-06
Identities = 47/123 (38%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Frame = +2
Query: 44 MSASASSLS--AFNPKSLPLCVSRPASVSV--LPPS-LSFKLHSDHLVSIFASSALKCSS 208
M++S+SSL + P++LP S+ S+S LPPS L+ L S F SS
Sbjct: 1 MASSSSSLHFLSLTPQTLPKPTSQTTSISFFSLPPSSLNLSLSSSSTPRNFESS------ 54
Query: 209 PAEYPSRFVRNVAVSSDFEVEE----DDMFADG---DDSAPVERNSFSPDLKLFVGNLSF 367
RFVR V +S ++EE DD +G D+ A E + +PDLK+FVGNL F
Sbjct: 55 ------RFVRKVTLSDFDQIEEVEAGDDDEEEGGLSDEGASYEERNANPDLKIFVGNLPF 108
Query: 368 NVD 376
+VD
Sbjct: 109 SVD 111