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[1][TOP]
>UniRef100_Q8L7S8 DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Arabidopsis thaliana
RepID=RH3_ARATH
Length = 748
Score = 164 bits (415), Expect = 5e-39
Identities = 76/77 (98%), Positives = 76/77 (98%)
Frame = -3
Query: 619 DSWEGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFI 440
DSW GDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFI
Sbjct: 672 DSWGGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFI 731
Query: 439 CGKSGHRATDCPDKRGF 389
CGKSGHRATDCPDKRGF
Sbjct: 732 CGKSGHRATDCPDKRGF 748
[2][TOP]
>UniRef100_Q8L7S8-2 Isoform 2 of DEAD-box ATP-dependent RNA helicase 3 n=1
Tax=Arabidopsis thaliana RepID=Q8L7S8-2
Length = 747
Score = 157 bits (398), Expect = 5e-37
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = -3
Query: 619 DSWEGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFI 440
DSW GDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRE SFGGSCFI
Sbjct: 672 DSWGGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRE-SFGGSCFI 730
Query: 439 CGKSGHRATDCPDKRGF 389
CGKSGHRATDCPDKRGF
Sbjct: 731 CGKSGHRATDCPDKRGF 747
[3][TOP]
>UniRef100_B9N3Z4 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Z4_POPTR
Length = 775
Score = 90.5 bits (223), Expect = 1e-16
Identities = 46/79 (58%), Positives = 54/79 (68%), Gaps = 10/79 (12%)
Frame = -3
Query: 595 RGSRRSSGGGSSWSRGGSS----------SRGSSDDWLIGGRSSSSSRAPSRERSFGGSC 446
RGS R S G ++ RGG S SR S DDWLIGGR SS R PSR+RSFGGSC
Sbjct: 699 RGSGRDSDDGGTYRRGGRSNSNENSWSQMSRSSGDDWLIGGRRSS--RPPSRDRSFGGSC 756
Query: 445 FICGKSGHRATDCPDKRGF 389
F CG+SGHRA++CP+K+ F
Sbjct: 757 FNCGRSGHRASECPNKKDF 775
[4][TOP]
>UniRef100_A9PJW0 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJW0_9ROSI
Length = 481
Score = 90.5 bits (223), Expect = 1e-16
Identities = 46/79 (58%), Positives = 54/79 (68%), Gaps = 10/79 (12%)
Frame = -3
Query: 595 RGSRRSSGGGSSWSRGGSS----------SRGSSDDWLIGGRSSSSSRAPSRERSFGGSC 446
RGS R S G ++ RGG S SR S DDWLIGGR SS R PSR+RSFGGSC
Sbjct: 405 RGSGRDSDDGGTYRRGGRSNSNENSWSQMSRSSGDDWLIGGRRSS--RPPSRDRSFGGSC 462
Query: 445 FICGKSGHRATDCPDKRGF 389
F CG+SGHRA++CP+K+ F
Sbjct: 463 FNCGRSGHRASECPNKKDF 481
[5][TOP]
>UniRef100_UPI0001984A30 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984A30
Length = 764
Score = 89.4 bits (220), Expect = 2e-16
Identities = 46/81 (56%), Positives = 54/81 (66%), Gaps = 5/81 (6%)
Frame = -3
Query: 616 SWEGDDDRGSRRSSGGGSSWSRGGSSSRG---SSDDWLIGGRSS--SSSRAPSRERSFGG 452
SW DDD G + GG S+ + SR S DDWLIGGR S SSS SRERSFGG
Sbjct: 684 SWGSDDDGGDDLNRRGGRSFRSNNNWSRNLRTSEDDWLIGGRRSNRSSSSFGSRERSFGG 743
Query: 451 SCFICGKSGHRATDCPDKRGF 389
SCF CG+SGHRA++CP+KR +
Sbjct: 744 SCFTCGRSGHRASECPNKRDY 764
[6][TOP]
>UniRef100_Q2HUZ8 Helicase, C-terminal; Zinc finger, CCHC-type; GUCT n=1 Tax=Medicago
truncatula RepID=Q2HUZ8_MEDTR
Length = 753
Score = 84.7 bits (208), Expect = 6e-15
Identities = 43/72 (59%), Positives = 50/72 (69%)
Frame = -3
Query: 607 GDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFICGKS 428
GD R RS G+SWS+ SSR DDWLIGGR SS S + S RSF G+CF CG+S
Sbjct: 683 GDSSRRGGRSYKSGNSWSKPERSSR---DDWLIGGRQSSRSSS-SPNRSFAGTCFTCGES 738
Query: 427 GHRATDCPDKRG 392
GHRA+DCP+KRG
Sbjct: 739 GHRASDCPNKRG 750
[7][TOP]
>UniRef100_A7PRF1 Chromosome chr14 scaffold_27, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PRF1_VITVI
Length = 762
Score = 83.2 bits (204), Expect = 2e-14
Identities = 46/86 (53%), Positives = 54/86 (62%), Gaps = 10/86 (11%)
Frame = -3
Query: 616 SWEGDDDRGSRRSSGGGSSWSRGGSSSRG---SSDDWLIGGRSS--SSSRAPSRER---- 464
SW DDD G + GG S+ + SR S DDWLIGGR S SSS SRER
Sbjct: 677 SWGSDDDGGDDLNRRGGRSFRSNNNWSRNLRTSEDDWLIGGRRSNRSSSSFGSRERCYYD 736
Query: 463 -SFGGSCFICGKSGHRATDCPDKRGF 389
SFGGSCF CG+SGHRA++CP+KR +
Sbjct: 737 RSFGGSCFTCGRSGHRASECPNKRDY 762
[8][TOP]
>UniRef100_B9RFT3 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus
communis RepID=B9RFT3_RICCO
Length = 772
Score = 79.3 bits (194), Expect = 2e-13
Identities = 45/92 (48%), Positives = 52/92 (56%), Gaps = 17/92 (18%)
Frame = -3
Query: 613 WEGDDDRGSRRSSGGGSSWSRGGSS-SRGSSDDWLIGGRSSSS----------------S 485
W G RG R S ++ RGG S SR SSDDWLIGG SS
Sbjct: 683 WGGG--RGGRNSDDDDDTFRRGGRSFSRSSSDDWLIGGGRSSRPSPRGRSSPRDWSSPRD 740
Query: 484 RAPSRERSFGGSCFICGKSGHRATDCPDKRGF 389
R+ R+RSFGGSCF CG+SGHRA+DCP+K F
Sbjct: 741 RSSPRDRSFGGSCFNCGRSGHRASDCPNKLDF 772
[9][TOP]
>UniRef100_B9N3Y9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Y9_POPTR
Length = 735
Score = 73.2 bits (178), Expect = 2e-11
Identities = 39/69 (56%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Frame = -3
Query: 601 DDRGSRRSSGGGSSWSRGGS-SSRGSSDDWLIGGRSSSSSRAPSRE-RSFGGSCFICGKS 428
DD G+ R G +S S SR S DDWL+GGR SS R SR+ RSFGGSCF CG+S
Sbjct: 669 DDEGTNRRGGRSNSNENTRSWMSRSSGDDWLVGGRRSS--RPSSRDSRSFGGSCFNCGRS 726
Query: 427 GHRATDCPD 401
GHRA++CP+
Sbjct: 727 GHRASECPN 735
[10][TOP]
>UniRef100_B7EBF8 cDNA clone:J013043E01, full insert sequence n=3 Tax=Oryza sativa
Japonica Group RepID=B7EBF8_ORYSJ
Length = 597
Score = 72.4 bits (176), Expect = 3e-11
Identities = 40/74 (54%), Positives = 45/74 (60%)
Frame = -3
Query: 619 DSWEGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFI 440
DSW DD G RRS+ S RG SS GS GGRSSS S RSF G+CF
Sbjct: 527 DSWSDDDFGGGRRSNRSSSFGGRG--SSYGSRSSSSFGGRSSSFGSRDS-SRSFSGACFN 583
Query: 439 CGKSGHRATDCPDK 398
CG+SGHRA+DCP+K
Sbjct: 584 CGESGHRASDCPNK 597
[11][TOP]
>UniRef100_B9F737 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9F737_ORYSJ
Length = 697
Score = 72.4 bits (176), Expect = 3e-11
Identities = 40/74 (54%), Positives = 45/74 (60%)
Frame = -3
Query: 619 DSWEGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFI 440
DSW DD G RRS+ S RG SS GS GGRSSS S RSF G+CF
Sbjct: 627 DSWSDDDFGGGRRSNRSSSFGGRG--SSYGSRSSSSFGGRSSSFGSRDS-SRSFSGACFN 683
Query: 439 CGKSGHRATDCPDK 398
CG+SGHRA+DCP+K
Sbjct: 684 CGESGHRASDCPNK 697
[12][TOP]
>UniRef100_B8AMQ6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AMQ6_ORYSI
Length = 779
Score = 72.4 bits (176), Expect = 3e-11
Identities = 40/74 (54%), Positives = 45/74 (60%)
Frame = -3
Query: 619 DSWEGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFI 440
DSW DD G RRS+ S RG SS GS GGRSSS S RSF G+CF
Sbjct: 709 DSWSDDDFGGGRRSNRSSSFGGRG--SSYGSRSSSSFGGRSSSFGSRDS-SRSFSGACFN 765
Query: 439 CGKSGHRATDCPDK 398
CG+SGHRA+DCP+K
Sbjct: 766 CGESGHRASDCPNK 779
[13][TOP]
>UniRef100_B6SSK6 Nucleolar RNA helicase 2 n=1 Tax=Zea mays RepID=B6SSK6_MAIZE
Length = 744
Score = 72.4 bits (176), Expect = 3e-11
Identities = 39/74 (52%), Positives = 43/74 (58%)
Frame = -3
Query: 619 DSWEGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFI 440
DSW DD G R S SS+ SSS S GGRSSS S RSF G+CF
Sbjct: 672 DSWSDDDWSGGGRKSNRSSSFGSRSSSSYSSRGSPSFGGRSSSFGSRESN-RSFSGACFN 730
Query: 439 CGKSGHRATDCPDK 398
CG+SGHRATDCP+K
Sbjct: 731 CGESGHRATDCPNK 744
[14][TOP]
>UniRef100_Q0DM51 DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Oryza sativa Japonica
Group RepID=RH3_ORYSJ
Length = 758
Score = 72.4 bits (176), Expect = 3e-11
Identities = 40/74 (54%), Positives = 45/74 (60%)
Frame = -3
Query: 619 DSWEGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFI 440
DSW DD G RRS+ S RG SS GS GGRSSS S RSF G+CF
Sbjct: 688 DSWSDDDFGGGRRSNRSSSFGGRG--SSYGSRSSSSFGGRSSSFGSRDS-SRSFSGACFN 744
Query: 439 CGKSGHRATDCPDK 398
CG+SGHRA+DCP+K
Sbjct: 745 CGESGHRASDCPNK 758
[15][TOP]
>UniRef100_Q0DM51-3 Isoform 3 of DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Oryza
sativa Japonica Group RepID=Q0DM51-3
Length = 757
Score = 72.0 bits (175), Expect = 4e-11
Identities = 40/74 (54%), Positives = 45/74 (60%)
Frame = -3
Query: 619 DSWEGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFI 440
DSW DD G RRS+ S RG SS GS GGRSSS SR SF G+CF
Sbjct: 688 DSWSDDDFGGGRRSNRSSSFGGRG--SSYGSRSSSSFGGRSSSFGSRDSR--SFSGACFN 743
Query: 439 CGKSGHRATDCPDK 398
CG+SGHRA+DCP+K
Sbjct: 744 CGESGHRASDCPNK 757
[16][TOP]
>UniRef100_B4FA24 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FA24_MAIZE
Length = 598
Score = 69.7 bits (169), Expect = 2e-10
Identities = 43/76 (56%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = -3
Query: 619 DSWEGDDDRGSRRSSGGGSSW-SRGGS-SSRGSSDDWLIGGRSSSSSRAPSRERSFGGSC 446
DSW DD G R S SS+ SR S SSRGS GGRSSS S RSF G+C
Sbjct: 527 DSWSDDDWSGGGRKSNRSSSFGSRSSSYSSRGSPS---FGGRSSSFGGRESN-RSFSGAC 582
Query: 445 FICGKSGHRATDCPDK 398
F CG+SGHRATDCP+K
Sbjct: 583 FNCGESGHRATDCPNK 598
[17][TOP]
>UniRef100_Q6L724 ATP-dependent RNA helicase n=1 Tax=Hordeum vulgare
RepID=Q6L724_HORVU
Length = 764
Score = 68.6 bits (166), Expect = 4e-10
Identities = 45/88 (51%), Positives = 52/88 (59%), Gaps = 14/88 (15%)
Frame = -3
Query: 619 DSWEGDD--DRGSRRS------SGGGSSWS-RGGSSSRGSSDDWLIGGRSSS-----SSR 482
D W DD G+RRS SGG SS+ RGGSSS G G RSSS S
Sbjct: 678 DIWSDDDFSGGGARRSNRSSSPSGGRSSYGGRGGSSSFGDRSS-SFGERSSSYGGRGGSS 736
Query: 481 APSRERSFGGSCFICGKSGHRATDCPDK 398
SR+RSF G+CF CG+SGHRA+DCP+K
Sbjct: 737 FGSRDRSFSGACFTCGQSGHRASDCPNK 764
[18][TOP]
>UniRef100_B4FFB7 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FFB7_MAIZE
Length = 148
Score = 65.9 bits (159), Expect = 3e-09
Identities = 40/76 (52%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = -3
Query: 619 DSWEGDDDRGSRRSSGGGSSWSRGGSSSRGS--SDDWLIGGRSSSSSRAPSRERSFGGSC 446
DSW DD G R S SS G SSS GS S G RSSS S RSF G+C
Sbjct: 74 DSWSDDDWSGGGRKSNRSSSSFGGRSSSYGSRGSPSPSFGVRSSSLGGRES-SRSFSGAC 132
Query: 445 FICGKSGHRATDCPDK 398
F CG+SGHRA+DCP+K
Sbjct: 133 FNCGESGHRASDCPNK 148
[19][TOP]
>UniRef100_A6N0F8 Nucleolar RNA helicase 2 (Fragment) n=1 Tax=Oryza sativa Indica
Group RepID=A6N0F8_ORYSI
Length = 60
Score = 59.7 bits (143), Expect = 2e-07
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = -3
Query: 586 RRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATDC 407
RRS+ S RG SS GS GGRSSS S RSF G+CF CG+SGHRA+DC
Sbjct: 1 RRSNRSSSFGGRG--SSYGSRSSSSFGGRSSSFGSRDS-SRSFSGACFNCGESGHRASDC 57
Query: 406 PDK 398
P+K
Sbjct: 58 PNK 60
[20][TOP]
>UniRef100_Q2PEW4 Putative uncharacterized protein (Fragment) n=1 Tax=Trifolium
pratense RepID=Q2PEW4_TRIPR
Length = 402
Score = 57.0 bits (136), Expect = 1e-06
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = -3
Query: 619 DSWEGDDDRGSRRSSGG-GSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCF 443
D W + R + SS SS +R SS+R SS + G SSS+ +P ++ G CF
Sbjct: 328 DDWSTEGRRSNGYSSSNRSSSPNRYSSSNRSSSSN----GYSSSNRSSPPNRGNYRGPCF 383
Query: 442 ICGKSGHRATDCPDK 398
CG+SGHRA DCP+K
Sbjct: 384 NCGQSGHRALDCPNK 398
[21][TOP]
>UniRef100_A9RFR6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RFR6_PHYPA
Length = 793
Score = 55.8 bits (133), Expect = 3e-06
Identities = 36/83 (43%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Frame = -3
Query: 607 GDDDR------GSRRSSGGGSSWSRGGSSSRGSSD---DWLIGGRSS---SSSRAPSRER 464
GD DR G R GG +S SS R SSD D RSS SS R+ R
Sbjct: 711 GDSDRFSSDRFGGRGGRGGSDRFSSDRSSDRFSSDRSGDRFSSDRSSDRFSSGRSSDRFG 770
Query: 463 SFGGSCFICGKSGHRATDCPDKR 395
SF G+CFIC K GH +CP++R
Sbjct: 771 SFSGTCFICNKPGHIGKNCPERR 793
[22][TOP]
>UniRef100_B8LKW8 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LKW8_PICSI
Length = 802
Score = 54.7 bits (130), Expect = 6e-06
Identities = 34/76 (44%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Frame = -3
Query: 613 WEGDDDRGSRRSSGGGSSWSRGGS---SSRGSSDDWLIGGRSSSSSRAPSRE---RSFGG 452
W+ G + SSG G SR S S+R S + G SSR S RSF G
Sbjct: 725 WKPRRSYGEKSSSGMGRGSSRPFSMSDSNRRSYGEKSSSGMGRGSSRPFSMSDSNRSFRG 784
Query: 451 SCFICGKSGHRATDCP 404
SCF+CG+SGHRA+DCP
Sbjct: 785 SCFVCGQSGHRASDCP 800