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[1][TOP]
>UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis
thaliana RepID=RPB1_ARATH
Length = 1840
Score = 225 bits (574), Expect = 2e-57
Identities = 106/106 (100%), Positives = 106/106 (100%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD
Sbjct: 1735 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 1794
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
YSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP
Sbjct: 1795 YSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 1840
Score = 109 bits (273), Expect = 2e-22
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSPS+ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1577 SPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1636
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1637 SPTSPAYSPTSPAYSPTSPA-YSP 1659
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1626 SPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1685
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S G Y+P
Sbjct: 1686 SPTSPSYSPTSPAYSPTSPG-YSP 1708
Score = 108 bits (269), Expect = 5e-22
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP Y
Sbjct: 1598 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAY 1657
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1658 SPTSPSYSPTSPSYSPTSP-SYSP 1680
Score = 108 bits (269), Expect = 5e-22
Identities = 56/84 (66%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1647 SPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGY 1706
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y P+S Y P
Sbjct: 1707 SPTSPSYSPTSPSYGPTSP-SYNP 1729
Score = 104 bits (259), Expect = 7e-21
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 3/84 (3%)
Frame = -1
Query: 611 IAYSPSNAR-LSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
+A+SPS++ SP+SP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP Y
Sbjct: 1535 MAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1594
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1595 SPTSPSYSPTSPSYSPTSP-SYSP 1617
Score = 103 bits (258), Expect = 9e-21
Identities = 53/84 (63%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP YSP+SP YSPTSP+YSP+SP+YSP+SP S SP Y
Sbjct: 1556 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1615
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1616 SPTSPSYSPTSPSYSPTSP-SYSP 1638
Score = 77.0 bits (188), Expect = 1e-12
Identities = 49/90 (54%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--YSPTSPN--YSPTS-PSYSPTSPSYSPSSPTYSPSSPYSS 456
SP+ SP N RLSP S +SP +SP+S P YSP+SP YSP+SP YSP+SP S
Sbjct: 1509 SPNYLLSP-NMRLSPMSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYS 1567
Query: 455 GASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S YSP+ PGYSP+S Y+P
Sbjct: 1568 PTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 1596
[2][TOP]
>UniRef100_Q56Z04 DNA-directed RNA polymerase II largest chain (Fragment) n=1
Tax=Arabidopsis thaliana RepID=Q56Z04_ARATH
Length = 99
Score = 208 bits (529), Expect = 3e-52
Identities = 97/97 (100%), Positives = 97/97 (100%)
Frame = -1
Query: 593 NARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSP 414
NARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSP
Sbjct: 3 NARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSP 62
Query: 413 TLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
TLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP
Sbjct: 63 TLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 99
[3][TOP]
>UniRef100_Q99367 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99367_SOYBN
Length = 494
Score = 161 bits (408), Expect = 4e-38
Identities = 77/98 (78%), Positives = 83/98 (84%), Gaps = 7/98 (7%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SPS+AYSPS+ RLSP+SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY+SG SPD
Sbjct: 393 SPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD 452
Query: 440 YSPSA-------GYSPTLPGYSPSSTGQYTPHEGDKKD 348
YSPS+ GYSP+ PGYSPSST QYTP DK D
Sbjct: 453 YSPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTSDKDD 490
Score = 110 bits (274), Expect = 1e-22
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP Y
Sbjct: 263 SPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSY 322
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 323 SPTSPSYSPTSPSYSPTSP-SYSP 345
Score = 109 bits (273), Expect = 2e-22
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 305 SPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGY 364
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y P
Sbjct: 365 SPTSPSYSPTSPSYSPTSP-SYNP 387
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 284 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 343
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S G Y+P
Sbjct: 344 SPTSPSYSPTSPAYSPTSPG-YSP 366
Score = 108 bits (269), Expect = 5e-22
Identities = 57/84 (67%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSPS+ SP+SP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP Y
Sbjct: 207 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 266
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 267 SPTSPSYSPTSPSYSPTSP-SYSP 289
Score = 108 bits (269), Expect = 5e-22
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 242 SPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 301
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 302 SPTSPAYSPTSPAYSPTSP-SYSP 324
Score = 101 bits (252), Expect = 4e-20
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP + S Y
Sbjct: 333 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKY 392
Query: 437 SPSAGYSPTLPGYSPSSTGQYTP 369
SPS YSP+ P SPSS Y+P
Sbjct: 393 SPSLAYSPSSPRLSPSS--PYSP 413
Score = 96.7 bits (239), Expect = 1e-18
Identities = 57/91 (62%), Positives = 61/91 (67%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S YSPS+ SP SP YSPTSP YSPTSP YSPTSP+YSPSSP YSP SP S
Sbjct: 214 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 273
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 274 SPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 303
Score = 90.5 bits (223), Expect = 1e-16
Identities = 56/97 (57%), Positives = 63/97 (64%), Gaps = 13/97 (13%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPAS-----PY------SPTS-PNYSPTSPSYSPTSPSYSPSSPTYS 477
SPS SP N RLSP S PY SPTS P YSP+SP YSP+SP YSP+SP YS
Sbjct: 174 SPSYLLSP-NLRLSPTSDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 232
Query: 476 PSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P+SP S SP YSP S YSP+ PGYSP+S Y+P
Sbjct: 233 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 268
[4][TOP]
>UniRef100_B9SXC0 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SXC0_RICCO
Length = 1855
Score = 159 bits (401), Expect = 2e-37
Identities = 81/116 (69%), Positives = 90/116 (77%), Gaps = 11/116 (9%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SPS+AYSPS+ RLSP+SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY+SG PD
Sbjct: 1740 SPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVGPD 1799
Query: 440 -------YSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDA----SKDDKGN 306
YSPSAGYSP+ PGYSPSST QYT K D+T K D +KD+K +
Sbjct: 1800 YSPSSPQYSPSAGYSPSAPGYSPSSTSQYT-QTSTKDDRTDKGDRNGRDNKDEKSS 1854
Score = 109 bits (273), Expect = 2e-22
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1652 SPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGY 1711
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y P
Sbjct: 1712 SPTSPSYSPTSPSYSPTSP-SYNP 1734
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1631 SPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1690
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S G Y+P
Sbjct: 1691 SPTSPSYSPTSPAYSPTSPG-YSP 1713
Score = 108 bits (270), Expect = 4e-22
Identities = 58/88 (65%), Positives = 66/88 (75%), Gaps = 4/88 (4%)
Frame = -1
Query: 620 SPSIA--YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA 450
SP+++ YSPS+ SP+SP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S
Sbjct: 1536 SPTLSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 1595
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S YSPT P YSP+S Y+P
Sbjct: 1596 SPAYSPTSPSYSPTSPSYSPTSP-SYSP 1622
Score = 108 bits (270), Expect = 4e-22
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSPS+ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1582 SPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1641
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1642 SPTSPVYSPTSPAYSPTSPA-YSP 1664
Score = 108 bits (269), Expect = 5e-22
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP Y
Sbjct: 1603 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAY 1662
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1663 SPTSPSYSPTSPSYSPTSP-SYSP 1685
Score = 103 bits (258), Expect = 9e-21
Identities = 53/84 (63%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP YSP+SP YSPTSP+YSP+SP+YSP+SP S SP Y
Sbjct: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1621 SPTSPSYSPTSPSYSPTSP-SYSP 1643
Score = 101 bits (252), Expect = 4e-20
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP + S Y
Sbjct: 1680 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKY 1739
Query: 437 SPSAGYSPTLPGYSPSSTGQYTP 369
SPS YSP+ P SPSS Y+P
Sbjct: 1740 SPSLAYSPSSPRLSPSS--PYSP 1760
Score = 87.8 bits (216), Expect = 7e-16
Identities = 56/91 (61%), Positives = 60/91 (65%), Gaps = 7/91 (7%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPA-----SPYSPTSPNYSPT-SPSYSPTSPSYSPSSPTYSPSSPYS 459
SPS SPS RLSP SPY P +SPT SP YSP+SP YSPSSP YSP+SP
Sbjct: 1507 SPSYLLSPS-LRLSPTTDAQFSPYVSGMP-FSPTLSPGYSPSSPGYSPSSPGYSPTSPGY 1564
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S GYSPT P YSPSS G Y+P
Sbjct: 1565 SPTSPGYSPTSPGYSPTSPTYSPSSPG-YSP 1594
Score = 59.3 bits (142), Expect = 2e-07
Identities = 40/77 (51%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Frame = -1
Query: 584 LSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPT----YSPSSPYSSGASPDYSP-SAGY 420
+SP+ SP S SPT+ + S P SPT YSPSSP S +SP YSP S GY
Sbjct: 1506 MSPSYLLSP-SLRLSPTTDAQFSPYVSGMPFSPTLSPGYSPSSPGYSPSSPGYSPTSPGY 1564
Query: 419 SPTLPGYSPSSTGQYTP 369
SPT PGYSP+S G Y+P
Sbjct: 1565 SPTSPGYSPTSPG-YSP 1580
[5][TOP]
>UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA
binding / DNA-directed RNA polymerase n=1 Tax=Vitis
vinifera RepID=UPI0001985649
Length = 1848
Score = 156 bits (395), Expect = 1e-36
Identities = 74/96 (77%), Positives = 82/96 (85%), Gaps = 7/96 (7%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SPS+AYSPS+ RLSP+SPYSPTSPNYSPTSPSYSPTSPSYSP+SPTYSP+SPY+SG SPD
Sbjct: 1747 SPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPD 1806
Query: 440 -------YSPSAGYSPTLPGYSPSSTGQYTPHEGDK 354
YSPSAGYSP+ PGYSPSST QYTP +K
Sbjct: 1807 YSPSSPQYSPSAGYSPSAPGYSPSSTSQYTPQMSNK 1842
Score = 110 bits (276), Expect = 7e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1596 SPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSY 1655
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1656 SPTSPAYSPTSPAYSPTSP-SYSP 1678
Score = 109 bits (273), Expect = 2e-22
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1659 SPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGY 1718
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y P
Sbjct: 1719 SPTSPSYSPTSPSYSPTSP-SYNP 1741
Score = 108 bits (269), Expect = 5e-22
Identities = 57/84 (67%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSPS+ SP+SP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP Y
Sbjct: 1540 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 1599
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1600 SPTSPSYSPTSPSYSPTSP-SYSP 1622
Score = 107 bits (266), Expect = 1e-21
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1575 SPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1634
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1635 SPTSPSYSPTSPVYSPTSP-SYSP 1657
Score = 107 bits (266), Expect = 1e-21
Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSP+YSPTSP+YSP+SP+YSP+SP S SP Y
Sbjct: 1631 SPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1690
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1691 SPTSPSYSPTSPSYSPTSPA-YSP 1713
Score = 102 bits (254), Expect = 3e-20
Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP + +S Y
Sbjct: 1687 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKY 1746
Query: 437 SPSAGYSPTLPGYSPSSTGQYTP 369
SPS YSP+ P SPSS Y+P
Sbjct: 1747 SPSLAYSPSSPRLSPSS--PYSP 1767
Score = 98.2 bits (243), Expect = 5e-19
Identities = 57/91 (62%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP SP S
Sbjct: 1603 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAY 1662
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1663 SPTSPAYSPTSPSYSPTSPSYSPTSP-SYSP 1692
Score = 96.7 bits (239), Expect = 1e-18
Identities = 57/91 (62%), Positives = 61/91 (67%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S YSPS+ SP SP YSPTSP YSPTSP YSPTSP+YSPSSP YSP SP S
Sbjct: 1547 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 1606
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1607 SPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1636
Score = 89.0 bits (219), Expect = 3e-16
Identities = 55/97 (56%), Positives = 63/97 (64%), Gaps = 13/97 (13%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPA-----SPY------SPTS-PNYSPTSPSYSPTSPSYSPSSPTYS 477
SP+ SP N RLSP SPY SPTS P YSP+SP YSP+SP YSP+SP YS
Sbjct: 1507 SPNYLLSP-NLRLSPITDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 1565
Query: 476 PSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P+SP S SP YSP S YSP+ PGYSP+S Y+P
Sbjct: 1566 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 1601
[6][TOP]
>UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99368_SOYBN
Length = 977
Score = 139 bits (350), Expect = 2e-31
Identities = 71/98 (72%), Positives = 76/98 (77%), Gaps = 7/98 (7%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SPS+AYSPS+ RLSP TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY+SG SPD
Sbjct: 886 SPSLAYSPSSPRLSP------TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD 939
Query: 440 Y-------SPSAGYSPTLPGYSPSSTGQYTPHEGDKKD 348
Y SPSAGYSP+ PGYSPSST Q TP DK +
Sbjct: 940 YSPTSPQFSPSAGYSPSQPGYSPSSTSQDTPQTSDKDE 977
Score = 105 bits (261), Expect = 4e-21
Identities = 56/86 (65%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S S YSPS+ SP+SP YSPTSP YSPTSP YSPTSP+YSPSSP YSP+SP S SP
Sbjct: 726 SSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 785
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YS S++ Y+P
Sbjct: 786 SYSPTSPAYSPTSPAYS-STSPAYSP 810
Score = 104 bits (259), Expect = 7e-21
Identities = 52/78 (66%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSP+SP YSPTSP+YSPTSPSYSP+SP YSP+SP S SP Y
Sbjct: 749 SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPAY 808
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S YSPT P YSP+S
Sbjct: 809 SPTSPSYSPTSPAYSPTS 826
Score = 102 bits (255), Expect = 2e-20
Identities = 56/99 (56%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ S SP YSPTSP+YSPTSP+YSPTSPSYS +SP+YSP+SP S SP Y
Sbjct: 791 SPAYSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSY 850
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDAS 324
SP S YSPT P YSP+S Y+P ++ K S
Sbjct: 851 SPTSPAYSPTSPSYSPTSP-SYSPTSPSYNPQSAKYSPS 888
Score = 99.4 bits (246), Expect = 2e-19
Identities = 52/84 (61%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP YSPTSP+YS TSP+YSP+SP+YSP+SP S SP Y
Sbjct: 770 SPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPTSPSY 829
Query: 437 S-PSAGYSPTLPGYSPSSTGQYTP 369
S S YSPT P YSP+S Y+P
Sbjct: 830 SLTSPSYSPTSPSYSPTSP-SYSP 852
Score = 98.6 bits (244), Expect = 4e-19
Identities = 50/83 (60%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YS ++ SP SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP + S Y
Sbjct: 826 SPSYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYNPQSAKY 885
Query: 437 SPSAGYSPTLPGYSPSSTGQYTP 369
SPS YSP+ P SP+S Y+P
Sbjct: 886 SPSLAYSPSSPRLSPTSP-NYSP 907
Score = 80.1 bits (196), Expect = 1e-13
Identities = 51/90 (56%), Positives = 60/90 (66%), Gaps = 6/90 (6%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--YSPTSPN--YSPTS-PSYSPTSPSYSPSSPTYSPSSPYSS 456
SPS SP N RLSP+S +SP +SP+S P YSP+SP YSPSSP YSP+SP S
Sbjct: 695 SPSYLLSP-NLRLSPSSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPSSPGYSPTSPGYS 753
Query: 455 GASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S YSP+ PGYSP+S Y+P
Sbjct: 754 PTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 782
[7][TOP]
>UniRef100_Q6ZJR1 DNA-directed RNA polymerase largest chain-like protein n=1
Tax=Oryza sativa Japonica Group RepID=Q6ZJR1_ORYSJ
Length = 138
Score = 125 bits (313), Expect = 4e-27
Identities = 66/105 (62%), Positives = 75/105 (71%), Gaps = 10/105 (9%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS------ 459
SPS AYSPS+ RLSP YS TSPNYSPTSP+YSPTSPSYS SP+YSP+SPY+
Sbjct: 37 SPSHAYSPSSPRLSP---YSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPS 93
Query: 458 ---SGASPDYSPSAGYSPTLPGYSPSSTG-QYTPHEGDKKDKTGK 336
S SP+YSPS YSPT PGYSPSSTG Q++P DK + K
Sbjct: 94 PDYSPTSPNYSPSGSYSPTAPGYSPSSTGQQFSPQAADKDKEKAK 138
[8][TOP]
>UniRef100_B9FZ51 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FZ51_ORYSJ
Length = 1526
Score = 125 bits (313), Expect = 4e-27
Identities = 66/105 (62%), Positives = 75/105 (71%), Gaps = 10/105 (9%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS------ 459
SPS AYSPS+ RLSP YS TSPNYSPTSP+YSPTSPSYS SP+YSP+SPY+
Sbjct: 1425 SPSHAYSPSSPRLSP---YSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPS 1481
Query: 458 ---SGASPDYSPSAGYSPTLPGYSPSSTG-QYTPHEGDKKDKTGK 336
S SP+YSPS YSPT PGYSPSSTG Q++P DK + K
Sbjct: 1482 PDYSPTSPNYSPSGSYSPTAPGYSPSSTGQQFSPQAADKDKEKAK 1526
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1316 SPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1375
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S G Y+P
Sbjct: 1376 SPTSPSYSPTSPAYSPTSPG-YSP 1398
Score = 108 bits (271), Expect = 3e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1267 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAY 1326
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1327 SPTSPAYSPTSPSYSPTSP-SYSP 1349
Score = 108 bits (270), Expect = 4e-22
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1337 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGY 1396
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y P
Sbjct: 1397 SPTSPSYSPTSPNYSPTSP-SYNP 1419
Score = 108 bits (269), Expect = 5e-22
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
SP YSP++ SPASP YSPTSP+Y+P SP+YSPTSPSYSP+SP+YSP+SP S SP
Sbjct: 1230 SPGPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSP 1289
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1290 SYSPTSPSYSPTSPSYSPTSP-SYSP 1314
Score = 107 bits (266), Expect = 1e-21
Identities = 55/84 (65%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ +P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1246 SPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1305
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1306 SPTSPSYSPTSPVYSPTSPA-YSP 1328
Score = 106 bits (264), Expect = 2e-21
Identities = 53/80 (66%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-S 429
YSPS+ SP YSPTSP+YSP SPSYSPTSPSY+P SPTYSP+SP S SP YSP S
Sbjct: 1222 YSPSSPVYSPGPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTS 1281
Query: 428 AGYSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 1282 PSYSPTSPSYSPTSP-SYSP 1300
Score = 105 bits (262), Expect = 3e-21
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSP YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1288 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSY 1347
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1348 SPTSPSYSPTSPSYSPTSP-SYSP 1370
Score = 99.4 bits (246), Expect = 2e-19
Identities = 51/85 (60%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP + +S Y
Sbjct: 1365 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKY 1424
Query: 437 SPSAGYSPTLPGYSPSS--TGQYTP 369
SPS YSP+ P SP S + Y+P
Sbjct: 1425 SPSHAYSPSSPRLSPYSQTSPNYSP 1449
Score = 96.7 bits (239), Expect = 1e-18
Identities = 52/84 (61%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP SP SP YSP SP+YSPTSPSY+P SP+YSP+SP+YSP+SP S SP Y
Sbjct: 1226 SPVYSPGPG-YSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSY 1284
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1285 SPTSPSYSPTSPSYSPTSP-SYSP 1307
Score = 96.7 bits (239), Expect = 1e-18
Identities = 52/107 (48%), Positives = 63/107 (58%), Gaps = 25/107 (23%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSP+YSPTSP YSP+SP+YSP+SP S SP Y
Sbjct: 1358 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSY 1417
Query: 437 SPSAG------------------------YSPTLPGYSPSSTGQYTP 369
+PS+ YSPT P YSP+S P
Sbjct: 1418 NPSSAKYSPSHAYSPSSPRLSPYSQTSPNYSPTSPTYSPTSPSYSQP 1464
Score = 95.9 bits (237), Expect = 2e-18
Identities = 50/85 (58%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Frame = -1
Query: 617 PSIAYSPSNAR-LSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
PS Y+PS+ SP+SP P YSPTSPSYSP SPSYSP+SP+Y+P SP S SP
Sbjct: 1210 PSPGYTPSSGGGYSPSSPVYSPGPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPS 1269
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1270 YSPTSPSYSPTSPSYSPTSP-SYSP 1293
Score = 95.9 bits (237), Expect = 2e-18
Identities = 57/105 (54%), Positives = 64/105 (60%), Gaps = 16/105 (15%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS------- 459
S +YSP++ SP SP YSPTSP+YSPTSP+YSPTSPSY+PSS YSPS YS
Sbjct: 1379 SPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRLS 1438
Query: 458 --SGASPDYSP-SAGYSPTLPGYSP-----SSTGQYTPHEGDKKD 348
S SP+YSP S YSPT P YS S T YT G D
Sbjct: 1439 PYSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPSPD 1483
[9][TOP]
>UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5YGY9_SORBI
Length = 1857
Score = 116 bits (290), Expect = 2e-24
Identities = 61/104 (58%), Positives = 74/104 (71%), Gaps = 9/104 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS------ 459
SPS AYSPS+ R++P YS TSP+YSPTSP+YSPTSPSYS SP+YSP+SP++
Sbjct: 1761 SPSHAYSPSSPRMTP---YSQTSPSYSPTSPTYSPTSPSYSQPSPSYSPTSPFNTSGGPS 1817
Query: 458 ---SGASPDYSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGK 336
S SP+YSPS YSPT PGYSPSSTGQ DK D++ +
Sbjct: 1818 PDYSPTSPNYSPSGSYSPTAPGYSPSSTGQ----GNDKDDESNR 1857
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1652 SPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1711
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S G Y+P
Sbjct: 1712 SPTSPSYSPTSPAYSPTSPG-YSP 1734
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP Y
Sbjct: 1680 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSY 1739
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+PSS +Y+P
Sbjct: 1740 SPTSPSYSPTSPSYNPSS-AKYSP 1762
Score = 108 bits (270), Expect = 4e-22
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1603 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAY 1662
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1663 SPTSPAYSPTSPSYSPTSP-SYSP 1685
Score = 108 bits (270), Expect = 4e-22
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1673 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGY 1732
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y P
Sbjct: 1733 SPTSPSYSPTSPSYSPTSP-SYNP 1755
Score = 108 bits (269), Expect = 5e-22
Identities = 53/78 (67%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ +P SP YSPTSPNYSPTSP+YSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1575 SPSYSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1634
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S YSPT P YSP+S
Sbjct: 1635 SPTSPSYSPTSPSYSPTS 1652
Score = 105 bits (262), Expect = 3e-21
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSP YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1624 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSY 1683
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1684 SPTSPSYSPTSPSYSPTSP-SYSP 1706
Score = 103 bits (256), Expect = 1e-20
Identities = 54/87 (62%), Positives = 61/87 (70%), Gaps = 8/87 (9%)
Frame = -1
Query: 605 YSPSNARLSPASP-------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSPS+ SP+SP YSP SP+YSP SPSYSPTSPSY+P SPTYSP+SP S S
Sbjct: 1544 YSPSSGGYSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSPTSPNYSPTS 1603
Query: 446 PDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P YSP S YSPT P YSP+S Y+P
Sbjct: 1604 PTYSPTSPSYSPTSPSYSPTSP-SYSP 1629
Score = 98.6 bits (244), Expect = 4e-19
Identities = 50/85 (58%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP + +S Y
Sbjct: 1701 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKY 1760
Query: 437 SPSAGYSPTLPGYSPSS--TGQYTP 369
SPS YSP+ P +P S + Y+P
Sbjct: 1761 SPSHAYSPSSPRMTPYSQTSPSYSP 1785
Score = 96.7 bits (239), Expect = 1e-18
Identities = 52/107 (48%), Positives = 63/107 (58%), Gaps = 25/107 (23%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSP+YSPTSP YSP+SP+YSP+SP S SP Y
Sbjct: 1694 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSY 1753
Query: 437 SPSAG------------------------YSPTLPGYSPSSTGQYTP 369
+PS+ YSPT P YSP+S P
Sbjct: 1754 NPSSAKYSPSHAYSPSSPRMTPYSQTSPSYSPTSPTYSPTSPSYSQP 1800
Score = 80.5 bits (197), Expect = 1e-13
Identities = 53/105 (50%), Positives = 62/105 (59%), Gaps = 21/105 (20%)
Frame = -1
Query: 620 SPSIAYSPSN--ARLSP----------ASP--YSPTSPNYSPTSP------SYSPTSPSY 501
SP+I SP N A SP SP YSP+S YSP+SP YSP SPSY
Sbjct: 1512 SPNIRASPINTDASFSPYVGHMAFSPFPSPGGYSPSSGGYSPSSPVFTPEKGYSPLSPSY 1571
Query: 500 SPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP+SP+YSP+SP + SP YSP S YSPT P YSP+S Y+P
Sbjct: 1572 SPASPSYSPTSPSYTPGSPTYSPTSPNYSPTSPTYSPTSP-SYSP 1615
[10][TOP]
>UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CBQ3_YARLI
Length = 1750
Score = 116 bits (290), Expect = 2e-24
Identities = 63/107 (58%), Positives = 75/107 (70%), Gaps = 14/107 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YSS 456
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSPSSP +++
Sbjct: 1644 SPSYSPTSPSYSPTSPSYSPTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKFNA 1703
Query: 455 GASPDYSP-SAGYSPTLPGYSPSS------TGQYTPHEGDKKDKTGK 336
GAS YSP S YSPT P YSP+S + Y+P GD KDK K
Sbjct: 1704 GASTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGSGDSKDKEKK 1750
Score = 108 bits (271), Expect = 3e-22
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1602 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1661
Query: 437 SPSAGYSPTLPGYSPSSTGQYTP 369
SP++ YSPT P YSP+S Y+P
Sbjct: 1662 SPTS-YSPTSPSYSPTSP-SYSP 1682
Score = 105 bits (261), Expect = 4e-21
Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S A++ ++ SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1581 SPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1640
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1641 SPTSPSYSPTSPSYSPTSP-SYSP 1663
Score = 99.8 bits (247), Expect = 2e-19
Identities = 56/100 (56%), Positives = 67/100 (67%), Gaps = 18/100 (18%)
Frame = -1
Query: 614 SIAYSPSNARL---------SPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSP 486
S +YSPS+ + SP+SP YSP+SP+YSPTSPSYSPTSPSYSP+SP
Sbjct: 1558 SPSYSPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSP 1617
Query: 485 TYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1618 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1656
Score = 87.4 bits (215), Expect = 9e-16
Identities = 45/81 (55%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Frame = -1
Query: 608 AYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
A SPS + SP SP++SP+SP+++ TSPSYSPSSP+YSP+SP S SP YSP
Sbjct: 1556 ATSPSYSPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPT 1615
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1616 SPSYSPTSPSYSPTSP-SYSP 1635
Score = 82.0 bits (201), Expect = 4e-14
Identities = 50/93 (53%), Positives = 61/93 (65%), Gaps = 9/93 (9%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSP 465
SPS + S L ASP +SP+SP ++ TSPSYSP+SPSYSP+SP +YSP+SP
Sbjct: 1558 SPSYSPSSPGMGLGAASPSFSPSSPAFAATSPSYSPSSPSYSPTSPSYSPTSPSYSPTSP 1617
Query: 464 YSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1618 SYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1649
[11][TOP]
>UniRef100_Q9BMP3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=Q9BMP3_MONBE
Length = 1743
Score = 115 bits (287), Expect = 4e-24
Identities = 59/92 (64%), Positives = 69/92 (75%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSP+YSP+SP+YSP+SP S SP Y
Sbjct: 1652 SPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSY 1711
Query: 437 SPSA---------GYSPTLPGYSPSSTGQYTP 369
SP+A GYSPT PGYSP+S G Y+P
Sbjct: 1712 SPTANGTSGPTSPGYSPTSPGYSPTSPG-YSP 1742
Score = 110 bits (275), Expect = 9e-23
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSP+YSP+SP+YSP+SP S SP Y
Sbjct: 1624 SPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSY 1683
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1684 SPTSPNYSPTSPSYSPTSP-NYSP 1706
Score = 104 bits (259), Expect = 7e-21
Identities = 55/92 (59%), Positives = 64/92 (69%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
S AYSP++ SP SP YSPTSP YSP+SPSYSPTSP+YSP+SP+YSP+SP
Sbjct: 1588 SPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPN 1647
Query: 461 SSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1648 YSPTSPSYSPTSPNYSPTSPSYSPTSP-NYSP 1678
Score = 103 bits (257), Expect = 1e-20
Identities = 54/86 (62%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
SP++ SP++ SP SP YSP+SP+YSPTSP+YSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1602 SPNVK-SPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSP 1660
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
+YSP S YSPT P YSP+S Y+P
Sbjct: 1661 NYSPTSPSYSPTSPNYSPTSP-SYSP 1685
Score = 98.2 bits (243), Expect = 5e-19
Identities = 55/99 (55%), Positives = 65/99 (65%), Gaps = 17/99 (17%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPS--------YSPTSPSYSPSSPT 483
S +YSP++ SP+SP YSPTSP+YSPTSP+ YSPTSP YSPSSP+
Sbjct: 1567 SPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPS 1626
Query: 482 YSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1627 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSP-NYSP 1664
Score = 92.0 bits (227), Expect = 3e-17
Identities = 49/90 (54%), Positives = 62/90 (68%), Gaps = 11/90 (12%)
Frame = -1
Query: 605 YSPSNARLSPASP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YSS 456
YSP++ SP SP YSPTSP+YSP+SP+Y+ SP+YSP+SP+YSP+SP S
Sbjct: 1548 YSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKS 1607
Query: 455 GASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S GYSP+ P YSP+S Y+P
Sbjct: 1608 PTSPGYSPTSPGYSPSSPSYSPTSP-NYSP 1636
Score = 87.8 bits (216), Expect = 7e-16
Identities = 49/91 (53%), Positives = 56/91 (61%), Gaps = 16/91 (17%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTY-------------- 480
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSP+YSP+SP+Y
Sbjct: 1666 SPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPG 1725
Query: 479 -SPSSPYSSGASPDYSPSAGYSPTLPGYSPS 390
SP+SP GYSPT PGYSPS
Sbjct: 1726 YSPTSP-------------GYSPTSPGYSPS 1743
Score = 85.9 bits (211), Expect = 2e-15
Identities = 50/94 (53%), Positives = 58/94 (61%), Gaps = 16/94 (17%)
Frame = -1
Query: 620 SPSIAYSPSNARLSP----ASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPY 462
SP A SP SP +SP YSPTSP+YSPTSP SPTSP +SP+SP ++P+SP+
Sbjct: 1488 SPGGAMSPGVVSASPFYDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPH 1547
Query: 461 SSGASPDYSP---------SAGYSPTLPGYSPSS 387
S SP YSP S YSPT P YSPSS
Sbjct: 1548 YSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSS 1581
Score = 61.6 bits (148), Expect = 5e-08
Identities = 37/88 (42%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSP---TSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSPYSSG 453
SP SP SP SP SP SP Y P+SP+ YSP+SP+YSP+SP
Sbjct: 1469 SPGGMLSPGGIAQSPGGAMSPGGAMSPGVVSASPFYDPSSPAGYSPTSPSYSPTSP---- 1524
Query: 452 ASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
G SPT PG+SP+S +TP
Sbjct: 1525 ---------GMSPTSPGFSPASPAGFTP 1543
[12][TOP]
>UniRef100_A9V5W6 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9V5W6_MONBE
Length = 1307
Score = 115 bits (287), Expect = 4e-24
Identities = 59/92 (64%), Positives = 69/92 (75%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSP+YSP+SP+YSP+SP S SP Y
Sbjct: 1216 SPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSY 1275
Query: 437 SPSA---------GYSPTLPGYSPSSTGQYTP 369
SP+A GYSPT PGYSP+S G Y+P
Sbjct: 1276 SPTANGTSGPTSPGYSPTSPGYSPTSPG-YSP 1306
Score = 110 bits (275), Expect = 9e-23
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSP+YSP+SP+YSP+SP S SP Y
Sbjct: 1188 SPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSY 1247
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1248 SPTSPNYSPTSPSYSPTSP-NYSP 1270
Score = 104 bits (259), Expect = 7e-21
Identities = 55/92 (59%), Positives = 64/92 (69%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
S AYSP++ SP SP YSPTSP YSP+SPSYSPTSP+YSP+SP+YSP+SP
Sbjct: 1152 SPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPN 1211
Query: 461 SSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1212 YSPTSPSYSPTSPNYSPTSPSYSPTSP-NYSP 1242
Score = 103 bits (257), Expect = 1e-20
Identities = 54/86 (62%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
SP++ SP++ SP SP YSP+SP+YSPTSP+YSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1166 SPNVK-SPTSPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSP 1224
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
+YSP S YSPT P YSP+S Y+P
Sbjct: 1225 NYSPTSPSYSPTSPNYSPTSP-SYSP 1249
Score = 98.2 bits (243), Expect = 5e-19
Identities = 55/99 (55%), Positives = 65/99 (65%), Gaps = 17/99 (17%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPS--------YSPTSPSYSPSSPT 483
S +YSP++ SP+SP YSPTSP+YSPTSP+ YSPTSP YSPSSP+
Sbjct: 1131 SPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPS 1190
Query: 482 YSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1191 YSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSP-NYSP 1228
Score = 92.0 bits (227), Expect = 3e-17
Identities = 49/90 (54%), Positives = 62/90 (68%), Gaps = 11/90 (12%)
Frame = -1
Query: 605 YSPSNARLSPASP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YSS 456
YSP++ SP SP YSPTSP+YSP+SP+Y+ SP+YSP+SP+YSP+SP S
Sbjct: 1112 YSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKS 1171
Query: 455 GASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S GYSP+ P YSP+S Y+P
Sbjct: 1172 PTSPGYSPTSPGYSPSSPSYSPTSP-NYSP 1200
Score = 87.8 bits (216), Expect = 7e-16
Identities = 49/91 (53%), Positives = 56/91 (61%), Gaps = 16/91 (17%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTY-------------- 480
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSP+YSP+SP+Y
Sbjct: 1230 SPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPG 1289
Query: 479 -SPSSPYSSGASPDYSPSAGYSPTLPGYSPS 390
SP+SP GYSPT PGYSPS
Sbjct: 1290 YSPTSP-------------GYSPTSPGYSPS 1307
Score = 85.9 bits (211), Expect = 2e-15
Identities = 50/94 (53%), Positives = 58/94 (61%), Gaps = 16/94 (17%)
Frame = -1
Query: 620 SPSIAYSPSNARLSP----ASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPY 462
SP A SP SP +SP YSPTSP+YSPTSP SPTSP +SP+SP ++P+SP+
Sbjct: 1052 SPGGAMSPGVVSASPFYDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPH 1111
Query: 461 SSGASPDYSP---------SAGYSPTLPGYSPSS 387
S SP YSP S YSPT P YSPSS
Sbjct: 1112 YSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSS 1145
Score = 61.6 bits (148), Expect = 5e-08
Identities = 37/88 (42%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSP---TSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSPYSSG 453
SP SP SP SP SP SP Y P+SP+ YSP+SP+YSP+SP
Sbjct: 1033 SPGGMLSPGGIAQSPGGAMSPGGAMSPGVVSASPFYDPSSPAGYSPTSPSYSPTSP---- 1088
Query: 452 ASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
G SPT PG+SP+S +TP
Sbjct: 1089 ---------GMSPTSPGFSPASPAGFTP 1107
[13][TOP]
>UniRef100_Q6CL79 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CL79_KLULA
Length = 1720
Score = 114 bits (286), Expect = 5e-24
Identities = 60/104 (57%), Positives = 74/104 (71%), Gaps = 6/104 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1617 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1676
Query: 437 SP-SAGYSPTLPGYSPS----STGQYTPHEGDKKDKTGKKDASK 321
SP S YSPT P YSP+ S G Y+P E +++ +K +K
Sbjct: 1677 SPTSPSYSPTSPSYSPTSPQYSPGSYSPAEPKQQESDEEKKENK 1720
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1554 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1613
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1614 SPTSPSYSPTSPSYSPTSP-SYSP 1636
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1575 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1634
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1635 SPTSPSYSPTSPSYSPTSP-SYSP 1657
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1596 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1655
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1656 SPTSPSYSPTSPSYSPTSP-SYSP 1678
Score = 102 bits (255), Expect = 2e-20
Identities = 53/78 (67%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = -1
Query: 596 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 423
S+ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1539 SSPGFSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1598
Query: 422 YSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 1599 YSPTSPSYSPTSP-SYSP 1615
[14][TOP]
>UniRef100_O94231 RNA polymerase II largest subunit (Fragment) n=1 Tax=Kluyveromyces
lactis RepID=O94231_KLULA
Length = 414
Score = 114 bits (286), Expect = 5e-24
Identities = 60/104 (57%), Positives = 74/104 (71%), Gaps = 6/104 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 311 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 370
Query: 437 SP-SAGYSPTLPGYSPS----STGQYTPHEGDKKDKTGKKDASK 321
SP S YSPT P YSP+ S G Y+P E +++ +K +K
Sbjct: 371 SPTSPSYSPTSPSYSPTSPQYSPGSYSPAEPKQQESDEEKKENK 414
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 248 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 307
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 308 SPTSPSYSPTSPSYSPTSP-SYSP 330
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 269 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 328
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 329 SPTSPSYSPTSPSYSPTSP-SYSP 351
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 290 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 349
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 350 SPTSPSYSPTSPSYSPTSP-SYSP 372
Score = 102 bits (255), Expect = 2e-20
Identities = 53/78 (67%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = -1
Query: 596 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 423
S+ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 233 SSPGFSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 292
Query: 422 YSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 293 YSPTSPSYSPTSP-SYSP 309
[15][TOP]
>UniRef100_C4VAM1 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4VAM1_NOSCE
Length = 1612
Score = 113 bits (283), Expect = 1e-23
Identities = 62/106 (58%), Positives = 74/106 (69%), Gaps = 8/106 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1504 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1563
Query: 437 SP-SAGYSPTLPGYSPSS------TGQYTPHEGDKKDKTGKKDASK 321
SP S YSPT P YSP+S + Y+P G KKDK K + +
Sbjct: 1564 SPTSPSYSPTSPSYSPTSLSYSPTSPSYSP-TGYKKDKDKKNERKR 1608
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1462 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1521
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1522 SPTSPSYSPTSPSYSPTSP-SYSP 1544
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1483 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1542
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1543 SPTSPSYSPTSPSYSPTSP-SYSP 1565
Score = 102 bits (253), Expect = 3e-20
Identities = 53/79 (67%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 426
SPS SP+ YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1448 SPSYGSASPS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1505
Query: 425 GYSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 1506 SYSPTSPSYSPTSP-SYSP 1523
Score = 87.8 bits (216), Expect = 7e-16
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPA-SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AY ++ SP S +S SP+Y SPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1427 SPAYLAEESKYSPKLSLFSVGSPSYGSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1486
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1487 SPTSPSYSPTSPSYSPTSP-SYSP 1509
[16][TOP]
>UniRef100_B0XAQ9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0XAQ9_CULQU
Length = 1874
Score = 113 bits (282), Expect = 1e-23
Identities = 57/90 (63%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S AYSP++ SP SPYSPTSP+YSPTSP+YSPTSPSYSPSSP+YSP+SP S SP YS
Sbjct: 1638 SPAYSPTSPSYSPTSPYSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYS 1697
Query: 434 PSA--------GYSPTLPGYSPSSTGQYTP 369
P++ YSPT P YSPSS Y+P
Sbjct: 1698 PTSPNYTPATPSYSPTSPNYSPSSP-HYSP 1726
Score = 107 bits (266), Expect = 1e-21
Identities = 54/84 (64%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSP+SP+YSPTSPSYSPTSPSYSP+SP Y+P++P S SP+Y
Sbjct: 1658 SPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNY 1717
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSPSS +Y+P
Sbjct: 1718 SPSSPHYSPTSPSYSPSSP-KYSP 1740
Score = 106 bits (265), Expect = 1e-21
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
SP+ Y+PS+ SP SP YSPTSP YSPTSPSYSPTSP+YSP+SP+YSPSSP S SP
Sbjct: 1629 SPTATYAPSSPAYSPTSPSYSPTSP-YSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSP 1687
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P Y+P +T Y+P
Sbjct: 1688 SYSPTSPSYSPTSPNYTP-ATPSYSP 1712
Score = 103 bits (258), Expect = 9e-21
Identities = 55/102 (53%), Positives = 66/102 (64%), Gaps = 18/102 (17%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTY 480
S S +YSPS+ + ASP YSPTSPNYSPTSP YSPTSP+YSP+SP Y
Sbjct: 1555 SASPSYSPSSPNYAAASPGGASPGYSPTSPSYSPTSPNYSPTSPRYSPTSPNYSPTSPNY 1614
Query: 479 SPSSPYSSGASPDYSPSAGYSPTLPGYSPSS-----TGQYTP 369
SP+SP S SP YSP+A Y+P+ P YSP+S T Y+P
Sbjct: 1615 SPTSPSYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSPYSP 1656
Score = 103 bits (256), Expect = 1e-20
Identities = 51/83 (61%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ +PA+P YSPTSPNYSP+SP YSPTSPSYSPSSP YSP+SP S SP Y
Sbjct: 1693 SPSYSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSY 1752
Query: 437 SPSAGYSPTLPGYSPSSTGQYTP 369
S Y+P P YSP+S +Y+P
Sbjct: 1753 GGSPQYTPASPQYSPTSP-KYSP 1774
Score = 100 bits (250), Expect = 7e-20
Identities = 57/96 (59%), Positives = 70/96 (72%), Gaps = 14/96 (14%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-------SSPYS 459
S AYSP++ SP+SP YSPTSP+YSPTSPSYSPTSP+Y+P++P+YSP SSP+
Sbjct: 1665 SPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSSPHY 1724
Query: 458 SGASPDYSPSA-GYSPTLPGYSPSS-----TGQYTP 369
S SP YSPS+ YSPT P YSP+S + QYTP
Sbjct: 1725 SPTSPSYSPSSPKYSPTSPSYSPTSPSYGGSPQYTP 1760
Score = 100 bits (249), Expect = 1e-19
Identities = 53/89 (59%), Positives = 63/89 (70%), Gaps = 7/89 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPS------YSPTSPSYSPSSPTYSPSSPYSSG 453
S +YSP++ SP + Y+P+SP YSPTSPS YSPTSPSYSP+SP YSP+SP S
Sbjct: 1618 SPSYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTSPYSPTSPSYSPTSPAYSPTSPSYSP 1677
Query: 452 ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+SP YSP S YSPT P YSP+S YTP
Sbjct: 1678 SSPSYSPTSPSYSPTSPSYSPTSP-NYTP 1705
Score = 99.4 bits (246), Expect = 2e-19
Identities = 53/87 (60%), Positives = 63/87 (72%), Gaps = 8/87 (9%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG------AS 447
Y+P+ SP SP YSP+SP+YSPTSPSYSP+SP YSP+SP+YSP+SP G AS
Sbjct: 1703 YTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYGGSPQYTPAS 1762
Query: 446 PDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P YSP S YSPT P YSPSS Q++P
Sbjct: 1763 PQYSPTSPKYSPTSPSYSPSSP-QHSP 1788
Score = 95.1 bits (235), Expect = 4e-18
Identities = 57/107 (53%), Positives = 65/107 (60%), Gaps = 28/107 (26%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP--------------------TSPS----- 504
YSP++ R SP SP YSPTSPNYSPTSPSYSP TSPS
Sbjct: 1593 YSPTSPRYSPTSPNYSPTSPNYSPTSPSYSPTSPLYSPTATYAPSSPAYSPTSPSYSPTS 1652
Query: 503 -YSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSPS+ YSPT P YSP+S Y+P
Sbjct: 1653 PYSPTSPSYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSP-SYSP 1698
Score = 90.5 bits (223), Expect = 1e-16
Identities = 54/99 (54%), Positives = 66/99 (66%), Gaps = 17/99 (17%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNY------SPTSPSYSPTSPSYSPSSPTYSPSSPY-- 462
S +YSPS+ + SP SP YSPTSP+Y +P SP YSPTSP YSP+SP+YSPSSP
Sbjct: 1728 SPSYSPSSPKYSPTSPSYSPTSPSYGGSPQYTPASPQYSPTSPKYSPTSPSYSPSSPQHS 1787
Query: 461 --SSGA-----SPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SSG+ SP YSP +A YSP + YSP S +Y+P
Sbjct: 1788 PGSSGSNFMVNSPTYSPTTARYSPNMSSYSPGSQ-KYSP 1825
Score = 90.1 bits (222), Expect = 1e-16
Identities = 52/95 (54%), Positives = 62/95 (65%), Gaps = 12/95 (12%)
Frame = -1
Query: 617 PSIA-YSPSNARLSPASPYSPTSPNYSPTSPS-----YSPTSPSYSPSSPTYSPSSPYSS 456
PS++ Y PS+ SP+ YSP+SPNY+ SP YSPTSPSYSP+SP YSP+SP S
Sbjct: 1544 PSMSPYFPSSPSASPS--YSPSSPNYAAASPGGASPGYSPTSPSYSPTSPNYSPTSPRYS 1601
Query: 455 GASPDYSP-SAGYSPTLPGYSPSS-----TGQYTP 369
SP+YSP S YSPT P YSP+S T Y P
Sbjct: 1602 PTSPNYSPTSPNYSPTSPSYSPTSPLYSPTATYAP 1636
Score = 82.8 bits (203), Expect = 2e-14
Identities = 56/125 (44%), Positives = 64/125 (51%), Gaps = 34/125 (27%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSP--------------------- 507
SPS SP + +PASP YSPTSP YSPTSPSYSP+SP
Sbjct: 1749 SPSYGGSP---QYTPASPQYSPTSPKYSPTSPSYSPSSPQHSPGSSGSNFMVNSPTYSPT 1805
Query: 506 ---------SYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ--YTPHE 363
SYSP S YSP+SP + SP YSPS+ YSPT GYSPSS Y+P
Sbjct: 1806 TARYSPNMSSYSPGSQKYSPTSPVYTPTSPHYSPSSPAYSPTGQGYSPSSPASPTYSPTS 1865
Query: 362 GDKKD 348
+D
Sbjct: 1866 PSYED 1870
Score = 80.9 bits (198), Expect = 8e-14
Identities = 44/76 (57%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSP-ASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP+ AR SP S YSP S YSPTSP Y+PTSP YSPSSP YSP+ G SP
Sbjct: 1799 SPTYSPTTARYSPNMSSYSPGSQKYSPTSPVYTPTSPHYSPSSPAYSPT---GQGYSPSS 1855
Query: 437 SPSAGYSPTLPGYSPS 390
S YSPT P Y S
Sbjct: 1856 PASPTYSPTSPSYEDS 1871
[17][TOP]
>UniRef100_A3GID7 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3GID7_PICST
Length = 1739
Score = 113 bits (282), Expect = 1e-23
Identities = 59/102 (57%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1638 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQY 1697
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDD 315
SP S YSPT P YSP+S QY+P + + K + K++
Sbjct: 1698 SPTSPSYSPTSPQYSPTSP-QYSPGSPEYSPNSPKTEDKKNE 1738
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1561 SPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1620
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1621 SPTSPSYSPTSPSYSPTSP-SYSP 1643
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1582 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1641
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1642 SPTSPSYSPTSPSYSPTSP-SYSP 1664
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1603 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1662
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1663 SPTSPSYSPTSPSYSPTSP-SYSP 1685
Score = 100 bits (250), Expect = 7e-20
Identities = 53/85 (62%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SPS S S + YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1532 SPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPS 1591
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1592 YSPTSPSYSPTSPSYSPTSP-SYSP 1615
Score = 100 bits (249), Expect = 1e-19
Identities = 58/91 (63%), Positives = 66/91 (72%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1610 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1669
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S QY+P
Sbjct: 1670 SPTSPSYSPTSPSYSPTSPQYSPTSP-QYSP 1699
Score = 84.7 bits (208), Expect = 6e-15
Identities = 49/85 (57%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SPS S SP+ S SP Y TSPSYSPTSPSYSP+SP+YSP+SP S SP
Sbjct: 1519 SPSATSPFSYGSTSPSFGGS-VSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA 1577
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1578 YSPTSPSYSPTSPSYSPTSP-SYSP 1601
[18][TOP]
>UniRef100_Q75A34 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Eremothecium
gossypii RepID=RPB1_ASHGO
Length = 1745
Score = 113 bits (282), Expect = 1e-23
Identities = 59/103 (57%), Positives = 70/103 (67%), Gaps = 2/103 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1640 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1699
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDK 312
SP S YSPT P YSP+S QY+P D + D+
Sbjct: 1700 SPTSPSYSPTSPSYSPTSP-QYSPRSPSYSPSFNNNDKEQKDE 1741
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1556 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1615
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1616 SPTSPSYSPTSPSYSPTSP-SYSP 1638
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1577 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1636
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSP-SYSP 1659
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1598 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1657
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1658 SPTSPSYSPTSPSYSPTSP-SYSP 1680
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1619 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1678
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1679 SPTSPSYSPTSPSYSPTSP-SYSP 1701
Score = 102 bits (255), Expect = 2e-20
Identities = 53/78 (67%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = -1
Query: 596 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 423
S+ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1541 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1600
Query: 422 YSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 1601 YSPTSPSYSPTSP-SYSP 1617
Score = 98.6 bits (244), Expect = 4e-19
Identities = 58/102 (56%), Positives = 70/102 (68%), Gaps = 10/102 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP
Sbjct: 1647 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP----T 1702
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYTP----HEGDKKDKTG 339
SP YSP S YSPT P YSP S Y+P ++ ++KD+ G
Sbjct: 1703 SPSYSPTSPSYSPTSPQYSPRSP-SYSPSFNNNDKEQKDENG 1743
[19][TOP]
>UniRef100_UPI0000546D90 PREDICTED: im:7136071 isoform 1 n=1 Tax=Danio rerio
RepID=UPI0000546D90
Length = 1972
Score = 112 bits (280), Expect = 2e-23
Identities = 57/84 (67%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNY+PTSPSYSPTSPSYSP+SP+YSP+SP + SP+Y
Sbjct: 1735 SPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNY 1794
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS +YTP
Sbjct: 1795 SPTSPSYSPTSPSYSPSSP-RYTP 1817
Score = 110 bits (276), Expect = 7e-23
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1616 SPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1675
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1676 SPTSPSYSPTSPSYSPTSP-SYSP 1698
Score = 110 bits (276), Expect = 7e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1679 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1738
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S YTP
Sbjct: 1739 SPTSPSYSPTSPSYSPTSP-NYTP 1761
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1658 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1717
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1718 SPTSPSYSPTSPSYSPTSP-SYSP 1740
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1640 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1699
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1700 SPSYSPTSPSYSPTSP-SYSP 1719
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1700 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1759
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
+P S YSPT P YSP+S Y+P
Sbjct: 1760 TPTSPSYSPTSPSYSPTSP-SYSP 1782
Score = 108 bits (270), Expect = 4e-22
Identities = 64/113 (56%), Positives = 74/113 (65%), Gaps = 9/113 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPS-------SPTYSPSSPYS 459
S +YSP++ SP SP Y+PTSPNYSPTSPSYSPTSPSYSPS SPTY+PSSP
Sbjct: 1770 SPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSY 1829
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
S +SP YSP S Y+PT P YSPSS +YTP K T K + K +P
Sbjct: 1830 SPSSPSYSPTSPKYTPTSPSYSPSSP-EYTP-TSPKYSPTSPKYSPTSPKYSP 1880
Score = 103 bits (258), Expect = 9e-21
Identities = 52/84 (61%), Positives = 63/84 (75%), Gaps = 5/84 (5%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP+Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1878 YSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1937
Query: 428 ----AGYSPTLPGYSPSSTGQYTP 369
+ YSPT PGYSP+S Y+P
Sbjct: 1938 SPKGSTYSPTSPGYSPTSP-TYSP 1960
Score = 102 bits (254), Expect = 3e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1857 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPT 1916
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1917 SPTYSPTSPKYSPTSP-TYSP 1936
Score = 101 bits (252), Expect = 4e-20
Identities = 52/83 (62%), Positives = 59/83 (71%), Gaps = 4/83 (4%)
Frame = -1
Query: 605 YSPSNARLSPASP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
YSP++ P SP Y+P SP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YS
Sbjct: 1596 YSPTSPAYEPRSPGGGYTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYS 1655
Query: 434 P-SAGYSPTLPGYSPSSTGQYTP 369
P S YSPT P YSP+S Y+P
Sbjct: 1656 PTSPSYSPTSPSYSPTSP-SYSP 1677
Score = 100 bits (250), Expect = 7e-20
Identities = 52/84 (61%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S Y+PS+ SP+SP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP Y
Sbjct: 1819 SPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKY 1878
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1879 SPTSPTYSPTTPKYSPTSP-TYSP 1901
Score = 99.0 bits (245), Expect = 3e-19
Identities = 53/94 (56%), Positives = 65/94 (69%), Gaps = 5/94 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP-- 444
S YSP+ + SP SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP
Sbjct: 1882 SPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKG 1941
Query: 443 -DYSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKD 348
YSP S GYSPT P YSP+ +P + D+++
Sbjct: 1942 STYSPTSPGYSPTSPTYSPA----ISPDDSDEEN 1971
Score = 95.5 bits (236), Expect = 3e-18
Identities = 54/91 (59%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYS 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYS P+SP Y+P+SP
Sbjct: 1707 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSY 1766
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P Y+P+S Y+P
Sbjct: 1767 SPTSPSYSPTSPSYSPTSPNYTPTSP-NYSP 1796
Score = 89.4 bits (220), Expect = 2e-16
Identities = 51/88 (57%), Positives = 60/88 (68%), Gaps = 6/88 (6%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S +YSPS+ SP SP Y+PTSP+YSP+SP Y+PTSP YSP+SP YSP SP
Sbjct: 1826 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSP----T 1881
Query: 449 SPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
SP YSP+ YSPT P YSP+S YTP
Sbjct: 1882 SPTYSPTTPKYSPTSPTYSPTSP-TYTP 1908
Score = 89.0 bits (219), Expect = 3e-16
Identities = 49/83 (59%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Frame = -1
Query: 608 AYSPSNARLSPASPYSPTSPN--YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
A SP+ + SPA Y P SP Y+P SP YSPTSPSYSP+SP+YSP+SP S SP YS
Sbjct: 1591 ALSPNYSPTSPA--YEPRSPGGGYTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYS 1648
Query: 434 P-SAGYSPTLPGYSPSSTGQYTP 369
P S YSPT P YSP+S Y+P
Sbjct: 1649 PTSPSYSPTSPSYSPTSP-SYSP 1670
Score = 66.6 bits (161), Expect = 2e-09
Identities = 44/98 (44%), Positives = 51/98 (52%), Gaps = 16/98 (16%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----------SPNYSPTSPSYSPTSPS--YSPSSPT 483
S A+SP S PASPY P+ SPNYSPTSP+Y P SP Y+P SP
Sbjct: 1559 SPAWSPTPGSPGSPGPASPYIPSPGYITLHFGALSPNYSPTSPAYEPRSPGGGYTPQSPG 1618
Query: 482 YSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
YSP+SP YSPT P YSP+S Y+P
Sbjct: 1619 YSPTSP-------------SYSPTSPSYSPTSP-NYSP 1642
[20][TOP]
>UniRef100_A5DCV3 DNA-directed RNA polymerase II subunit RPB1 (Fragments) n=1
Tax=Pichia guilliermondii RepID=RPB1_PICGU
Length = 1579
Score = 112 bits (280), Expect = 2e-23
Identities = 59/92 (64%), Positives = 68/92 (73%), Gaps = 2/92 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1487 SPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPAY 1546
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDK 345
SP S YSP P YSP S Y+P + D KDK
Sbjct: 1547 SPTSPQYSPNSPQYSPRSP-LYSPDQNDDKDK 1577
Score = 109 bits (273), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1452 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSY 1511
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1512 SPTSPSYSPTSPSYSPTSP-SYSP 1534
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1389 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1448
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1449 SPTSPSYSPTSPSYSPTSP-SYSP 1471
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1410 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1469
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1470 SPTSPSYSPTSPSYSPTSP-SYSP 1492
Score = 107 bits (268), Expect = 6e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1431 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1490
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1491 SPTSPSYSPTSPLYSPTSP-SYSP 1513
Score = 100 bits (248), Expect = 1e-19
Identities = 53/84 (63%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AY ++ SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1368 SPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1427
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1428 SPTSPSYSPTSPSYSPTSP-SYSP 1450
Score = 98.6 bits (244), Expect = 4e-19
Identities = 56/88 (63%), Positives = 63/88 (71%), Gaps = 6/88 (6%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP SP
Sbjct: 1459 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSP----T 1514
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S YSPT P YSP+S QY+P
Sbjct: 1515 SPSYSPTSPSYSPTSPSYSPTSP-QYSP 1541
Score = 82.4 bits (202), Expect = 3e-14
Identities = 45/83 (54%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = -1
Query: 608 AYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
AY SP SP Y TSP Y SP Y TSP+YSP+SP+YSP+SP S SP YS
Sbjct: 1348 AYGGQPGSPSPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYS 1407
Query: 434 P-SAGYSPTLPGYSPSSTGQYTP 369
P S YSPT P YSP+S Y+P
Sbjct: 1408 PTSPSYSPTSPSYSPTSP-SYSP 1429
[21][TOP]
>UniRef100_UPI0000F24379 DNA-directed RNA polymerase II largest subunit (RNA polymerase II
subunit 1) (B220) n=1 Tax=Pichia stipitis CBS 6054
RepID=UPI0000F24379
Length = 1739
Score = 112 bits (279), Expect = 3e-23
Identities = 58/102 (56%), Positives = 74/102 (72%), Gaps = 2/102 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1638 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQY 1697
Query: 437 SPSAG-YSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDD 315
SP++ YSPT P YSP+S QY+P + + K + K++
Sbjct: 1698 SPTSPLYSPTSPQYSPTSP-QYSPGSPEYSPNSPKTEDKKNE 1738
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1561 SPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1620
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1621 SPTSPSYSPTSPSYSPTSP-SYSP 1643
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1582 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1641
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1642 SPTSPSYSPTSPSYSPTSP-SYSP 1664
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1603 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1662
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1663 SPTSPSYSPTSPSYSPTSP-SYSP 1685
Score = 100 bits (250), Expect = 7e-20
Identities = 53/85 (62%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SPS S S + YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1532 SPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPS 1591
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1592 YSPTSPSYSPTSPSYSPTSP-SYSP 1615
Score = 100 bits (249), Expect = 1e-19
Identities = 58/91 (63%), Positives = 66/91 (72%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1610 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1669
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S QY+P
Sbjct: 1670 SPTSPSYSPTSPSYSPTSPQYSPTSP-QYSP 1699
Score = 84.7 bits (208), Expect = 6e-15
Identities = 49/85 (57%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SPS S SP+ S SP Y TSPSYSPTSPSYSP+SP+YSP+SP S SP
Sbjct: 1519 SPSATSPFSYGSTSPSFGGS-VSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPA 1577
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1578 YSPTSPSYSPTSPSYSPTSP-SYSP 1601
[22][TOP]
>UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351
Length = 2085
Score = 112 bits (279), Expect = 3e-23
Identities = 58/88 (65%), Positives = 67/88 (76%), Gaps = 4/88 (4%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA 450
SPS +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S
Sbjct: 1680 SPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1739
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S YSP S YSPT PGYSP+S Y+P
Sbjct: 1740 SSAYSPTSPAYSPTSPGYSPTSP-SYSP 1766
Score = 110 bits (276), Expect = 7e-23
Identities = 60/97 (61%), Positives = 69/97 (71%), Gaps = 13/97 (13%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP---YSPTSP---------NYSPTSPSYSPTSPSYSPSSPTYS 477
SPS +YSP++ SP SP YSPTSP NYSPTSPSYSPTSPSYSP+SP+YS
Sbjct: 1664 SPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYS 1723
Query: 476 PSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P+SP S SP YSP S+ YSPT P YSP+S G Y+P
Sbjct: 1724 PTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPG-YSP 1759
Score = 99.4 bits (246), Expect = 2e-19
Identities = 48/83 (57%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTS YSPTSP+YSPTSP YSP+SP+YSPSSP + +S Y
Sbjct: 1719 SPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKY 1778
Query: 437 SPSAGYSPTLPGYSPSSTGQYTP 369
+PS YSP+ P Y S++ Y+P
Sbjct: 1779 TPSHAYSPSSPNYYSSTSPTYSP 1801
Score = 92.8 bits (229), Expect = 2e-17
Identities = 55/90 (61%), Positives = 67/90 (74%), Gaps = 8/90 (8%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYS--PTSPSYSPTSPSYS--PSSPTYSPSSP-YS-S 456
S Y+P+++ SP SP Y+PTSP+YS PTSPSYSPTSPSYS P+SP+YSP+SP Y+ S
Sbjct: 1643 SPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYS 1702
Query: 455 GASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S YSPT P YSP+S Y+P
Sbjct: 1703 PTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1731
Score = 89.7 bits (221), Expect = 2e-16
Identities = 49/87 (56%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S+ +SP++ S SP YSP+SP YSPTS SYSPTSP YSP+SP Y+P+S S SP Y
Sbjct: 1601 SLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSY 1660
Query: 437 ---SPSAGYSPTLPGYSPSSTG-QYTP 369
SPS YSPT P YSP+S Y+P
Sbjct: 1661 NPTSPSYSYSPTSPSYSPTSPSYSYSP 1687
Score = 85.1 bits (209), Expect = 4e-15
Identities = 49/89 (55%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YSSGASPD 441
S AYSP++ SP SP YSPTSP+YSP+SPSY+P+S Y+PS YSPSSP Y S SP
Sbjct: 1740 SSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSH-AYSPSSPNYYSSTSPT 1798
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTPHEGD 357
YSP S YS P YSP+ + GD
Sbjct: 1799 YSPTSPSYSQPSPSYSPTRGEEGAIANGD 1827
Score = 84.7 bits (208), Expect = 6e-15
Identities = 47/84 (55%), Positives = 56/84 (66%), Gaps = 5/84 (5%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS-- 435
YS ++ SP+SP YSPTS +YSPTSP YSPTSP Y+P+S YSP+SP + SP YS
Sbjct: 1611 YSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYS 1670
Query: 434 -PSAGYSPTLPGYSPSSTG-QYTP 369
S YSPT P YS S T Y+P
Sbjct: 1671 PTSPSYSPTSPSYSYSPTSPSYSP 1694
Score = 79.7 bits (195), Expect = 2e-13
Identities = 49/100 (49%), Positives = 57/100 (57%), Gaps = 18/100 (18%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
S Y+P + SPASP Y PTS +SPTSP YS TSP YSPSSP YSP+S
Sbjct: 1572 SSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLS 1631
Query: 461 SSGASPDYSP--------SAGYSPTLPGYSPSSTG-QYTP 369
S SP YSP S+ YSPT P Y+P+S Y+P
Sbjct: 1632 YSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSP 1671
Score = 65.9 bits (159), Expect = 3e-09
Identities = 40/89 (44%), Positives = 48/89 (53%), Gaps = 16/89 (17%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPSYSP--------TSPSYSPSSPTYSPSSPYSSGA 450
YSPS +P +S Y+P SP YSP TSPSY P+S +SP+SP S
Sbjct: 1555 YSPSPPVCTPGPGSFTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSAT 1614
Query: 449 SPDYSPSA--------GYSPTLPGYSPSS 387
SP YSPS+ YSPT P YSP+S
Sbjct: 1615 SPIYSPSSPIYSPTSLSYSPTSPVYSPTS 1643
[23][TOP]
>UniRef100_UPI000051AA8E PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) n=1 Tax=Apis mellifera
RepID=UPI000051AA8E
Length = 452
Score = 112 bits (279), Expect = 3e-23
Identities = 58/84 (69%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 206 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 265
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS YTP
Sbjct: 266 SPTSPSYSPTSPSYSPSSP-NYTP 288
Score = 110 bits (275), Expect = 9e-23
Identities = 59/86 (68%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
SPSI +PS+ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP
Sbjct: 143 SPSI--TPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 200
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 201 SYSPTSPSYSPTSPSYSPTSP-SYSP 225
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 185 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 244
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 245 SPTSPSYSPTSPSYSPTSP-SYSP 267
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 167 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 226
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 227 SPSYSPTSPSYSPTSP-SYSP 246
Score = 108 bits (270), Expect = 4e-22
Identities = 56/84 (66%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSPSSP + ASP Y
Sbjct: 234 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSY 293
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSP+ P YSP+S Y+P
Sbjct: 294 SPTSPSYSPSSPQYSPASP-SYSP 316
Score = 108 bits (269), Expect = 5e-22
Identities = 56/90 (62%), Positives = 68/90 (75%), Gaps = 8/90 (8%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSP+SP+Y+P SPSYSP+SP+YSPSSP S ASP Y
Sbjct: 255 SPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPASPSY 314
Query: 437 SPSA-GYSPTLPGYSPSS------TGQYTP 369
SPS+ YSPT P YSP+S + QYTP
Sbjct: 315 SPSSPKYSPTSPSYSPTSPSFAGTSPQYTP 344
Score = 100 bits (250), Expect = 7e-20
Identities = 51/84 (60%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ P SP +P+SPNYSPTSP+YSPTSP+YSP+SP+YSP+SP S SP Y
Sbjct: 129 SPSYSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSY 188
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 189 SPTSPSYSPTSPSYSPTSP-SYSP 211
Score = 100 bits (250), Expect = 7e-20
Identities = 52/91 (57%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ +PASP YSP+SP YSP SPSYSP+SP YSP+SP+YSP+SP
Sbjct: 276 SPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSF 335
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+G SP Y+P S YSPT P YSP+S Y+P
Sbjct: 336 AGTSPQYTPASPTYSPTSPTYSPTSP-SYSP 365
Score = 100 bits (248), Expect = 1e-19
Identities = 53/92 (57%), Positives = 63/92 (68%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
S YSP++ SP+SP YSP+SPNYSPTSP+YSPTSP YSPSS YSP+SP
Sbjct: 353 SPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSPSSTKYSPTSPT 412
Query: 461 SSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+ SP YSP S YSP +PGYSP+S Y+P
Sbjct: 413 YTPTSPSYSPTSPTYSPPVPGYSPTSP-TYSP 443
Score = 99.0 bits (245), Expect = 3e-19
Identities = 55/106 (51%), Positives = 67/106 (63%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ + SPASP YSPTSP+YSPTSPS++ TSP Y+P+SPTYSP+SP
Sbjct: 297 SPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPASPTYSPTSPTY 356
Query: 458 SGASPDYSPSA----------------GYSPTLPGYSPSSTGQYTP 369
S SP YSPS+ YSPT P YSP+S QY+P
Sbjct: 357 SPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSP-QYSP 401
Score = 97.8 bits (242), Expect = 6e-19
Identities = 53/91 (58%), Positives = 61/91 (67%), Gaps = 10/91 (10%)
Frame = -1
Query: 614 SIAYSPSN--------ARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
S +YSPS+ R SP+SP YSPTSP YSPTSP YSP+S YSP+SPTY+P+SP
Sbjct: 360 SPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSPSSTKYSPTSPTYTPTSPS 419
Query: 461 SSGASPDYSPSA-GYSPTLPGYSPSSTGQYT 372
S SP YSP GYSPT P YSP+S T
Sbjct: 420 YSPTSPTYSPPVPGYSPTSPTYSPASPAYET 450
Score = 92.4 bits (228), Expect = 3e-17
Identities = 53/102 (51%), Positives = 65/102 (63%), Gaps = 15/102 (14%)
Frame = -1
Query: 620 SPSIA-----YSPSNARLSPASP-YSPTSPNYSPTSPS--------YSPTSPSYSPSSPT 483
SPS A Y+P++ SP SP YSPTSP+YSP+SP YSP+SP+YSP+SPT
Sbjct: 332 SPSFAGTSPQYTPASPTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPT 391
Query: 482 YSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTPHEG 360
YSP+SP S +S YSP S Y+PT P YSP+S P G
Sbjct: 392 YSPTSPQYSPSSTKYSPTSPTYTPTSPSYSPTSPTYSPPVPG 433
Score = 92.0 bits (227), Expect = 3e-17
Identities = 47/84 (55%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Frame = -1
Query: 617 PSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
PS++ P + + YSPTSP Y PTSPS +P+SP+YSP+SPTYSP+SP S SP Y
Sbjct: 115 PSMSPYPMSPAGGASPSYSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYSPTSPSY 174
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 175 SPTSPSYSPTSPSYSPTSP-SYSP 197
Score = 59.7 bits (143), Expect = 2e-07
Identities = 40/88 (45%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Frame = -1
Query: 608 AYSPSNARLSPASPYSPTSPNYSP--------TSPSYSPTSPSYSPSSPTYSPSSPYSSG 453
AYSP P SP SP P+ SP SPSYSPTSP+Y P+SP+ +PSSP
Sbjct: 102 AYSPQ-----PGSPGSP-GPSMSPYPMSPAGGASPSYSPTSPAYLPTSPSITPSSP---- 151
Query: 452 ASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 152 ---------NYSPTSPTYSPTSP-NYSP 169
[24][TOP]
>UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q5WMZ9_ORYSJ
Length = 1741
Score = 112 bits (279), Expect = 3e-23
Identities = 58/88 (65%), Positives = 67/88 (76%), Gaps = 4/88 (4%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA 450
SPS +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S
Sbjct: 1627 SPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1686
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S YSP S YSPT PGYSP+S Y+P
Sbjct: 1687 SSAYSPTSPAYSPTSPGYSPTSP-SYSP 1713
Score = 110 bits (276), Expect = 7e-23
Identities = 60/97 (61%), Positives = 69/97 (71%), Gaps = 13/97 (13%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP---YSPTSP---------NYSPTSPSYSPTSPSYSPSSPTYS 477
SPS +YSP++ SP SP YSPTSP NYSPTSPSYSPTSPSYSP+SP+YS
Sbjct: 1611 SPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYS 1670
Query: 476 PSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P+SP S SP YSP S+ YSPT P YSP+S G Y+P
Sbjct: 1671 PTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPG-YSP 1706
Score = 110 bits (274), Expect = 1e-22
Identities = 57/86 (66%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
SPS YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+S YSP+SP S SP
Sbjct: 1643 SPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSP 1702
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSP+ P Y+PSS +YTP
Sbjct: 1703 GYSPTSPSYSPSSPSYNPSSV-KYTP 1727
Score = 94.4 bits (233), Expect = 7e-18
Identities = 49/82 (59%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTS +YSPTSP+YSP+SP YSP+SP S +SP Y
Sbjct: 1659 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSY 1718
Query: 437 SPSA-GYSPTLPGYSPSSTGQY 375
+PS+ Y+P+ YSPSS Y
Sbjct: 1719 NPSSVKYTPS-HAYSPSSPNYY 1739
Score = 92.8 bits (229), Expect = 2e-17
Identities = 55/90 (61%), Positives = 67/90 (74%), Gaps = 8/90 (8%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYS--PTSPSYSPTSPSYS--PSSPTYSPSSP-YS-S 456
S Y+P+++ SP SP Y+PTSP+YS PTSPSYSPTSPSYS P+SP+YSP+SP Y+ S
Sbjct: 1590 SPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYS 1649
Query: 455 GASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S YSPT P YSP+S Y+P
Sbjct: 1650 PTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1678
Score = 89.7 bits (221), Expect = 2e-16
Identities = 49/87 (56%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S+ +SP++ S SP YSP+SP YSPTS SYSPTSP YSP+SP Y+P+S S SP Y
Sbjct: 1548 SLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSY 1607
Query: 437 ---SPSAGYSPTLPGYSPSSTG-QYTP 369
SPS YSPT P YSP+S Y+P
Sbjct: 1608 NPTSPSYSYSPTSPSYSPTSPSYSYSP 1634
Score = 84.7 bits (208), Expect = 6e-15
Identities = 47/84 (55%), Positives = 56/84 (66%), Gaps = 5/84 (5%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS-- 435
YS ++ SP+SP YSPTS +YSPTSP YSPTSP Y+P+S YSP+SP + SP YS
Sbjct: 1558 YSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYS 1617
Query: 434 -PSAGYSPTLPGYSPSSTG-QYTP 369
S YSPT P YS S T Y+P
Sbjct: 1618 PTSPSYSPTSPSYSYSPTSPSYSP 1641
Score = 79.7 bits (195), Expect = 2e-13
Identities = 49/100 (49%), Positives = 57/100 (57%), Gaps = 18/100 (18%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
S Y+P + SPASP Y PTS +SPTSP YS TSP YSPSSP YSP+S
Sbjct: 1519 SSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLS 1578
Query: 461 SSGASPDYSP--------SAGYSPTLPGYSPSSTG-QYTP 369
S SP YSP S+ YSPT P Y+P+S Y+P
Sbjct: 1579 YSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSP 1618
Score = 65.9 bits (159), Expect = 3e-09
Identities = 40/89 (44%), Positives = 48/89 (53%), Gaps = 16/89 (17%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPSYSP--------TSPSYSPSSPTYSPSSPYSSGA 450
YSPS +P +S Y+P SP YSP TSPSY P+S +SP+SP S
Sbjct: 1502 YSPSPPVCTPGPGSFTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSAT 1561
Query: 449 SPDYSPSA--------GYSPTLPGYSPSS 387
SP YSPS+ YSPT P YSP+S
Sbjct: 1562 SPIYSPSSPIYSPTSLSYSPTSPVYSPTS 1590
[25][TOP]
>UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DKN9_ORYSJ
Length = 1834
Score = 112 bits (279), Expect = 3e-23
Identities = 58/88 (65%), Positives = 67/88 (76%), Gaps = 4/88 (4%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA 450
SPS +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S
Sbjct: 1680 SPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1739
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S YSP S YSPT PGYSP+S Y+P
Sbjct: 1740 SSAYSPTSPAYSPTSPGYSPTSP-SYSP 1766
Score = 110 bits (276), Expect = 7e-23
Identities = 60/97 (61%), Positives = 69/97 (71%), Gaps = 13/97 (13%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP---YSPTSP---------NYSPTSPSYSPTSPSYSPSSPTYS 477
SPS +YSP++ SP SP YSPTSP NYSPTSPSYSPTSPSYSP+SP+YS
Sbjct: 1664 SPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYS 1723
Query: 476 PSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P+SP S SP YSP S+ YSPT P YSP+S G Y+P
Sbjct: 1724 PTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPG-YSP 1759
Score = 99.4 bits (246), Expect = 2e-19
Identities = 48/83 (57%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTS YSPTSP+YSPTSP YSP+SP+YSPSSP + +S Y
Sbjct: 1719 SPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKY 1778
Query: 437 SPSAGYSPTLPGYSPSSTGQYTP 369
+PS YSP+ P Y S++ Y+P
Sbjct: 1779 TPSHAYSPSSPNYYSSTSPTYSP 1801
Score = 92.8 bits (229), Expect = 2e-17
Identities = 55/90 (61%), Positives = 67/90 (74%), Gaps = 8/90 (8%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYS--PTSPSYSPTSPSYS--PSSPTYSPSSP-YS-S 456
S Y+P+++ SP SP Y+PTSP+YS PTSPSYSPTSPSYS P+SP+YSP+SP Y+ S
Sbjct: 1643 SPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPTSPSYNYS 1702
Query: 455 GASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S YSPT P YSP+S Y+P
Sbjct: 1703 PTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1731
Score = 89.7 bits (221), Expect = 2e-16
Identities = 49/87 (56%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S+ +SP++ S SP YSP+SP YSPTS SYSPTSP YSP+SP Y+P+S S SP Y
Sbjct: 1601 SLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSY 1660
Query: 437 ---SPSAGYSPTLPGYSPSSTG-QYTP 369
SPS YSPT P YSP+S Y+P
Sbjct: 1661 NPTSPSYSYSPTSPSYSPTSPSYSYSP 1687
Score = 89.4 bits (220), Expect = 2e-16
Identities = 50/93 (53%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YSSGASPD 441
S AYSP++ SP SP YSPTSP+YSP+SPSY+P+S Y+PS YSPSSP Y S SP
Sbjct: 1740 SSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSH-AYSPSSPNYYSSTSPT 1798
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDK 345
YSP S YS P YSP+S + HE ++++
Sbjct: 1799 YSPTSPSYSQPSPSYSPTSRVEEEAHEEAEEEE 1831
Score = 84.7 bits (208), Expect = 6e-15
Identities = 47/84 (55%), Positives = 56/84 (66%), Gaps = 5/84 (5%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS-- 435
YS ++ SP+SP YSPTS +YSPTSP YSPTSP Y+P+S YSP+SP + SP YS
Sbjct: 1611 YSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYS 1670
Query: 434 -PSAGYSPTLPGYSPSSTG-QYTP 369
S YSPT P YS S T Y+P
Sbjct: 1671 PTSPSYSPTSPSYSYSPTSPSYSP 1694
Score = 79.7 bits (195), Expect = 2e-13
Identities = 49/100 (49%), Positives = 57/100 (57%), Gaps = 18/100 (18%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
S Y+P + SPASP Y PTS +SPTSP YS TSP YSPSSP YSP+S
Sbjct: 1572 SSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLS 1631
Query: 461 SSGASPDYSP--------SAGYSPTLPGYSPSSTG-QYTP 369
S SP YSP S+ YSPT P Y+P+S Y+P
Sbjct: 1632 YSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSP 1671
Score = 65.9 bits (159), Expect = 3e-09
Identities = 40/89 (44%), Positives = 48/89 (53%), Gaps = 16/89 (17%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPSYSP--------TSPSYSPSSPTYSPSSPYSSGA 450
YSPS +P +S Y+P SP YSP TSPSY P+S +SP+SP S
Sbjct: 1555 YSPSPPVCTPGPGSFTSSSPYNPVSPFYSPASPLSCPLTSPSYVPTSLPHSPTSPIYSAT 1614
Query: 449 SPDYSPSA--------GYSPTLPGYSPSS 387
SP YSPS+ YSPT P YSP+S
Sbjct: 1615 SPIYSPSSPIYSPTSLSYSPTSPVYSPTS 1643
[26][TOP]
>UniRef100_Q6FQS9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FQS9_CANGA
Length = 1715
Score = 112 bits (279), Expect = 3e-23
Identities = 61/99 (61%), Positives = 71/99 (71%), Gaps = 4/99 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1617 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1676
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTPHEG--DKKDKTGKKD 330
SP S YSPT P YSP+S Y+P KD+ KKD
Sbjct: 1677 SPTSPSYSPTSPSYSPTSP-SYSPGSPTYSPKDEDEKKD 1714
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1554 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1613
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1614 SPTSPSYSPTSPSYSPTSP-SYSP 1636
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1575 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1634
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1635 SPTSPSYSPTSPSYSPTSP-SYSP 1657
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1596 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1655
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1656 SPTSPSYSPTSPSYSPTSP-SYSP 1678
Score = 102 bits (255), Expect = 2e-20
Identities = 53/78 (67%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = -1
Query: 596 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 423
S+ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1539 SSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1598
Query: 422 YSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 1599 YSPTSPSYSPTSP-SYSP 1615
Score = 77.8 bits (190), Expect = 7e-13
Identities = 48/85 (56%), Positives = 54/85 (63%), Gaps = 14/85 (16%)
Frame = -1
Query: 581 SPASP---------YSPTSPNYSPTSPSYSPTSPSYSPSSP----TYSPSSPYSSGASPD 441
+PASP +SPTSP YSPTSPSYSPTSPSYS +YSP+SP S SP
Sbjct: 1529 APASPGFGGVSSPGFSPTSPAYSPTSPSYSPTSPSYS----PTSPSYSPTSPSYSPTSPS 1584
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1585 YSPTSPSYSPTSPSYSPTSP-SYSP 1608
[27][TOP]
>UniRef100_C5DXL0 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DXL0_ZYGRC
Length = 1744
Score = 112 bits (279), Expect = 3e-23
Identities = 58/92 (63%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1647 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1706
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDK 345
SP S YSPT P YSP S Y+P + D+
Sbjct: 1707 SPTSPSYSPTSPNYSPGSP-TYSPSSPKQDDR 1737
Score = 109 bits (273), Expect = 2e-22
Identities = 56/84 (66%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1671
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1672 SPTSPSYSPTSPSYSPTSP-SYSP 1694
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1570 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1629
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1630 SPTSPSYSPTSPSYSPTSP-SYSP 1652
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1591 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1650
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1651 SPTSPSYSPTSPSYSPTSP-NYSP 1673
Score = 108 bits (271), Expect = 3e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1549 SPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1608
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1609 SPTSPSYSPTSPSYSPTSP-SYSP 1631
Score = 99.8 bits (247), Expect = 2e-19
Identities = 51/78 (65%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = -1
Query: 596 SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 423
S+ SP+SP YSPTSP+YSPTSPSYSP SP+YSP+SP+YSP+SP S SP YSP S
Sbjct: 1534 SSPGFSPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1593
Query: 422 YSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 1594 YSPTSPSYSPTSP-SYSP 1610
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1619 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSY 1678
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1679 SPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1708
Score = 83.6 bits (205), Expect = 1e-14
Identities = 40/59 (67%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSP SPTYSPSSP D
Sbjct: 1682 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPGSPTYSPSSPKQDDREKD 1740
[28][TOP]
>UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WN64_CANDC
Length = 1735
Score = 112 bits (279), Expect = 3e-23
Identities = 58/93 (62%), Positives = 66/93 (70%), Gaps = 9/93 (9%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SP YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1538 SPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1597
Query: 464 YSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S G Y+P
Sbjct: 1598 SYSPTSPSYSPTSPSYSPTSPSYSPTSPG-YSP 1629
Score = 111 bits (278), Expect = 4e-23
Identities = 59/97 (60%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP Y
Sbjct: 1638 SPSYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSY 1697
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKD 330
SP S YSPT P YSP+S +Y+P + K+ KKD
Sbjct: 1698 SPTSPQYSPTSPQYSPTSP-RYSPGSPGYEPKSPKKD 1733
Score = 110 bits (276), Expect = 7e-23
Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1610 SPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPSY 1669
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S QY+P
Sbjct: 1670 SPTSPQYSPTSPSYSPTSP-QYSP 1692
Score = 108 bits (271), Expect = 3e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1568 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGY 1627
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1628 SPTSPSYSPTSPSYSPTSP-SYSP 1650
Score = 107 bits (266), Expect = 1e-21
Identities = 55/84 (65%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP S SP Y
Sbjct: 1589 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSY 1648
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1649 SPTSPSYSPTSPQYSPTSP-SYSP 1671
Score = 101 bits (252), Expect = 4e-20
Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
Frame = -1
Query: 608 AYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
A SP A SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1531 ATSPGYA--SPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1588
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1589 SPSYSPTSPSYSPTSP-SYSP 1608
Score = 77.0 bits (188), Expect = 1e-12
Identities = 36/55 (65%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 453
S +YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP SP Y P SP G
Sbjct: 1680 SPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSPRYSPGSPGYEPKSPKKDG 1734
Score = 65.5 bits (158), Expect = 3e-09
Identities = 39/74 (52%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Frame = -1
Query: 578 PASPY--SPTSPNYSP-TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPT 411
P SP SP S Y+ TSP Y+ YSP+SP+YSP+SP S SP YSP S YSPT
Sbjct: 1515 PTSPAATSPFSFGYNTATSPGYASPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1574
Query: 410 LPGYSPSSTGQYTP 369
P YSP+S Y+P
Sbjct: 1575 SPSYSPTSP-SYSP 1587
[29][TOP]
>UniRef100_UPI0000F2BF13 PREDICTED: similar to RNA polymerase II isoform 2 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF13
Length = 1932
Score = 111 bits (278), Expect = 4e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNY+PTSPSYSPTSPSYSP+SP Y+P+SP S SP Y
Sbjct: 1693 SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSY 1752
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS +YTP
Sbjct: 1753 SPTSPSYSPTSPSYSPSSP-RYTP 1775
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1574 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1633
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1634 SPTSPSYSPTSPSYSPTSP-SYSP 1656
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1616 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1675
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1676 SPTSPSYSPTSPSYSPTSP-SYSP 1698
Score = 109 bits (272), Expect = 2e-22
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y
Sbjct: 1721 SPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTY 1780
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
+PS+ YSP+ P YSP+S +YTP
Sbjct: 1781 TPSSPSYSPSSPSYSPTSP-KYTP 1803
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1657
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1658 SPSYSPTSPSYSPTSP-SYSP 1677
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1651 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1710
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1711 SPTSPNYTPTSPSYSPTSP-SYSP 1733
Score = 105 bits (262), Expect = 3e-21
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSP+SP Y+P+SP S SP Y
Sbjct: 1672 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSY 1731
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1732 SPTSPNYTPTSPNYSPTSP-SYSP 1754
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1552 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1611
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSP-SYSP 1635
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1815 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1874
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1875 SPTYSPTSPKYSPTSP-TYSP 1894
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1836 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1895
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1896 SPKGSTYSPTSPGYSPTS 1913
Score = 102 bits (253), Expect = 3e-20
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ R +P SP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP
Sbjct: 1763 SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY 1822
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP +T +Y+P
Sbjct: 1823 SPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1852
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1623 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1682
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1683 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1712
Score = 98.2 bits (243), Expect = 5e-19
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 1791 SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 1850
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 1851 SPTSPTYSPTSPVYTPTSP-KYSP 1873
Score = 97.1 bits (240), Expect = 1e-18
Identities = 48/81 (59%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSP+SP Y+P SP+Y+PSSP+YSPSSP S SP Y+P
Sbjct: 1745 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1804
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSP+ P Y+P+S +Y+P
Sbjct: 1805 SPSYSPSSPEYTPTSP-KYSP 1824
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1850 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1906
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1907 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1932
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1822 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1881
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1882 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1911
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1524 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1583
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1584 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1628
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1875 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1925
Query: 443 DYS 435
D S
Sbjct: 1926 DDS 1928
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1508 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1565
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1566 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1593
[30][TOP]
>UniRef100_UPI0000F2BF12 PREDICTED: similar to RNA polymerase II isoform 1 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF12
Length = 1970
Score = 111 bits (278), Expect = 4e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNY+PTSPSYSPTSPSYSP+SP Y+P+SP S SP Y
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSY 1790
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS +YTP
Sbjct: 1791 SPTSPSYSPTSPSYSPSSP-RYTP 1813
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1671
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1672 SPTSPSYSPTSPSYSPTSP-SYSP 1694
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1713
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1714 SPTSPSYSPTSPSYSPTSP-SYSP 1736
Score = 109 bits (272), Expect = 2e-22
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y
Sbjct: 1759 SPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTY 1818
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
+PS+ YSP+ P YSP+S +YTP
Sbjct: 1819 TPSSPSYSPSSPSYSPTSP-KYTP 1841
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSP-SYSP 1715
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1748
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1749 SPTSPNYTPTSPSYSPTSP-SYSP 1771
Score = 105 bits (262), Expect = 3e-21
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSP+SP Y+P+SP S SP Y
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSY 1769
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1770 SPTSPNYTPTSPNYSPTSP-SYSP 1792
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSP-SYSP 1673
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1853 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1913 SPTYSPTSPKYSPTSP-TYSP 1932
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1934 SPKGSTYSPTSPGYSPTS 1951
Score = 102 bits (253), Expect = 3e-20
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ R +P SP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP
Sbjct: 1801 SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY 1860
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP +T +Y+P
Sbjct: 1861 SPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1890
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1661 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1720
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1721 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1750
Score = 98.2 bits (243), Expect = 5e-19
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 1829 SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 1888
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 1889 SPTSPTYSPTSPVYTPTSP-KYSP 1911
Score = 97.1 bits (240), Expect = 1e-18
Identities = 48/81 (59%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSP+SP Y+P SP+Y+PSSP+YSPSSP S SP Y+P
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSP+ P Y+P+S +Y+P
Sbjct: 1843 SPSYSPSSPEYTPTSP-KYSP 1862
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1888 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1944
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1945 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1970
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1860 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1919
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1920 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1949
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1562 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1621
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1913 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1963
Query: 443 DYS 435
D S
Sbjct: 1964 DDS 1966
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1546 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1631
[31][TOP]
>UniRef100_UPI0000EBDCD2 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
isoform 4 n=1 Tax=Bos taurus RepID=UPI0000EBDCD2
Length = 1970
Score = 111 bits (278), Expect = 4e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNY+PTSPSYSPTSPSYSP+SP Y+P+SP S SP Y
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSY 1790
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS +YTP
Sbjct: 1791 SPTSPSYSPTSPSYSPSSP-RYTP 1813
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1671
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1672 SPTSPSYSPTSPSYSPTSP-SYSP 1694
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1713
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1714 SPTSPSYSPTSPSYSPTSP-SYSP 1736
Score = 109 bits (272), Expect = 2e-22
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y
Sbjct: 1759 SPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTY 1818
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
+PS+ YSP+ P YSP+S +YTP
Sbjct: 1819 TPSSPSYSPSSPSYSPTSP-KYTP 1841
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSP-SYSP 1715
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1748
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1749 SPTSPNYTPTSPSYSPTSP-SYSP 1771
Score = 105 bits (262), Expect = 3e-21
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSP+SP Y+P+SP S SP Y
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSY 1769
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1770 SPTSPNYTPTSPNYSPTSP-SYSP 1792
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSP-SYSP 1673
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1853 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1913 SPTYSPTSPKYSPTSP-TYSP 1932
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1934 SPKGSTYSPTSPGYSPTS 1951
Score = 102 bits (253), Expect = 3e-20
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ R +P SP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP
Sbjct: 1801 SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY 1860
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP +T +Y+P
Sbjct: 1861 SPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1890
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1661 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1720
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1721 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1750
Score = 98.2 bits (243), Expect = 5e-19
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 1829 SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 1888
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 1889 SPTSPTYSPTSPVYTPTSP-KYSP 1911
Score = 97.1 bits (240), Expect = 1e-18
Identities = 48/81 (59%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSP+SP Y+P SP+Y+PSSP+YSPSSP S SP Y+P
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSP+ P Y+P+S +Y+P
Sbjct: 1843 SPSYSPSSPEYTPTSP-KYSP 1862
Score = 95.5 bits (236), Expect = 3e-18
Identities = 50/87 (57%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1888 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1944
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D ++
Sbjct: 1945 PGYSPTSPTYSLTSPA-ISPDDSDDEN 1970
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1860 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1919
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1920 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1949
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1562 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1621
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1913 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1963
Query: 443 DYS 435
D S
Sbjct: 1964 DDS 1966
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1546 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1631
[32][TOP]
>UniRef100_UPI00005A0B2C PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 23 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2C
Length = 1888
Score = 111 bits (278), Expect = 4e-23
Identities = 62/109 (56%), Positives = 75/109 (68%), Gaps = 5/109 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1688 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1747
Query: 437 SPSA----GYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
SPS+ Y+PT P YSPSS +YTP K T K + K +P
Sbjct: 1748 SPSSPTSPKYTPTSPSYSPSSP-EYTP-TSPKYSPTSPKYSPTSPKYSP 1794
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1611 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1670
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1671 SPTSPSYSPTSPSYSPTSP-SYSP 1693
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1653 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1712
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1713 SPTSPSYSPTSPSYSPTSP-SYSP 1735
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSP-SYSP 1714
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1589 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1648
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSP-SYSP 1672
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1771 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1830
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1831 SPTYSPTSPKYSPTSP-TYSP 1850
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1792 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1851
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1852 SPKGSTYSPTSPGYSPTS 1869
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1660 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1719
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1720 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1749
Score = 96.3 bits (238), Expect = 2e-18
Identities = 51/87 (58%), Positives = 61/87 (70%), Gaps = 5/87 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPY----SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
S +YSP++ SP SP SPTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S S
Sbjct: 1730 SPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 1789
Query: 446 PDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P YSP S YSPT P YSP+S Y+P
Sbjct: 1790 PKYSPTSPTYSPTTPKYSPTSP-TYSP 1815
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1806 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1862
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1863 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1888
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1778 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1837
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1838 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1867
Score = 87.4 bits (215), Expect = 9e-16
Identities = 50/91 (54%), Positives = 61/91 (67%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS 459
S +YSP++ SP+SP Y+PTSP+YSP+SP Y+PTSP YSP+SP YSP SP
Sbjct: 1737 SPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSP-- 1794
Query: 458 SGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
SP YSP+ YSPT P YSP+S YTP
Sbjct: 1795 --TSPTYSPTTPKYSPTSPTYSPTSP-VYTP 1822
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1561 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1620
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1621 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1665
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1831 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1881
Query: 443 DYS 435
D S
Sbjct: 1882 DDS 1884
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1545 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1602
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1603 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1630
[33][TOP]
>UniRef100_UPI00003BD271 hypothetical protein DEHA0A14036g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BD271
Length = 1749
Score = 111 bits (278), Expect = 4e-23
Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1632 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQY 1691
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S QY+P
Sbjct: 1692 SPTSPSYSPTSPSYSPTSP-QYSP 1714
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1604 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1663
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S QY+P
Sbjct: 1664 SPTSPSYSPTSPSYSPTSP-QYSP 1686
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1562 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1621
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1622 SPTSPSYSPTSPSYSPTSP-SYSP 1644
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1583 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1642
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1643 SPTSPSYSPTSPSYSPTSP-SYSP 1665
Score = 103 bits (257), Expect = 1e-20
Identities = 64/112 (57%), Positives = 73/112 (65%), Gaps = 15/112 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP SP S
Sbjct: 1639 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSY 1698
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP------HEGDKKDKTGKKDAS 324
S SP YSP S YSPT P YSP+S QY+P E + K K KKD +
Sbjct: 1699 SPTSPSYSPTSPQYSPTSPQYSPTSP-QYSPGSPLYSPESESKSKDEKKDGN 1749
Score = 99.8 bits (247), Expect = 2e-19
Identities = 52/79 (65%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 426
SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1548 SPGYGGTSPT--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1605
Query: 425 GYSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 1606 SYSPTSPSYSPTSP-SYSP 1623
Score = 87.0 bits (214), Expect = 1e-15
Identities = 47/82 (57%), Positives = 54/82 (65%), Gaps = 11/82 (13%)
Frame = -1
Query: 581 SPASPYS----------PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP 432
SP SP+S TSP Y TSP+YSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1529 SPTSPFSYGATSPSFGGVTSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1588
Query: 431 -SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1589 TSPSYSPTSPSYSPTSP-SYSP 1609
[34][TOP]
>UniRef100_UPI0001B7A25C UPI0001B7A25C related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25C
Length = 1968
Score = 111 bits (278), Expect = 4e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNY+PTSPSYSPTSPSYSP+SP Y+P+SP S SP Y
Sbjct: 1733 SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSY 1792
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS +YTP
Sbjct: 1793 SPTSPSYSPTSPSYSPSSP-RYTP 1815
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1614 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1673
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1674 SPTSPSYSPTSPSYSPTSP-SYSP 1696
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1656 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1715
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1716 SPTSPSYSPTSPSYSPTSP-SYSP 1738
Score = 109 bits (272), Expect = 2e-22
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y
Sbjct: 1761 SPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTY 1820
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
+PS+ YSP+ P YSP+S +YTP
Sbjct: 1821 TPSSPSYSPSSPSYSPTSP-KYTP 1843
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1638 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1697
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1698 SPSYSPTSPSYSPTSP-SYSP 1717
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1691 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1750
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1751 SPTSPNYTPTSPSYSPTSP-SYSP 1773
Score = 105 bits (262), Expect = 3e-21
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSP+SP Y+P+SP S SP Y
Sbjct: 1712 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSY 1771
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1772 SPTSPNYTPTSPNYSPTSP-SYSP 1794
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1592 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1651
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1652 YSPTSPSYSPTSPSYSPTSP-SYSP 1675
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1855 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1914
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1915 SPTYSPTSPKYSPTSP-TYSP 1934
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1876 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1935
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1936 SPKGSTYSPTSPGYSPTS 1953
Score = 102 bits (253), Expect = 3e-20
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ R +P SP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP
Sbjct: 1803 SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY 1862
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP +T +Y+P
Sbjct: 1863 SPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1892
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1663 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1722
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1723 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1752
Score = 98.2 bits (243), Expect = 5e-19
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 1831 SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 1890
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 1891 SPTSPTYSPTSPVYTPTSP-KYSP 1913
Score = 97.8 bits (242), Expect = 6e-19
Identities = 52/84 (61%), Positives = 62/84 (73%), Gaps = 5/84 (5%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP
Sbjct: 1869 YSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPT 1928
Query: 431 SAGYSPTLPG---YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1929 SPTYSPTSPKGSTYSPTSPG-YSP 1951
Score = 97.1 bits (240), Expect = 1e-18
Identities = 48/81 (59%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSP+SP Y+P SP+Y+PSSP+YSPSSP S SP Y+P
Sbjct: 1785 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1844
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSP+ P Y+P+S +Y+P
Sbjct: 1845 SPSYSPSSPEYTPTSP-KYSP 1864
Score = 94.7 bits (234), Expect = 5e-18
Identities = 48/74 (64%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1890 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1946
Query: 428 AGYSPTLPGYSPSS 387
GYSPT P YS +S
Sbjct: 1947 PGYSPTSPTYSLTS 1960
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1564 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1623
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1624 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1668
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1548 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1605
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1606 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1633
[35][TOP]
>UniRef100_UPI0001B7A25B UPI0001B7A25B related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25B
Length = 1932
Score = 111 bits (278), Expect = 4e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNY+PTSPSYSPTSPSYSP+SP Y+P+SP S SP Y
Sbjct: 1693 SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSY 1752
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS +YTP
Sbjct: 1753 SPTSPSYSPTSPSYSPSSP-RYTP 1775
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1574 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1633
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1634 SPTSPSYSPTSPSYSPTSP-SYSP 1656
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1616 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1675
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1676 SPTSPSYSPTSPSYSPTSP-SYSP 1698
Score = 109 bits (272), Expect = 2e-22
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y
Sbjct: 1721 SPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTY 1780
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
+PS+ YSP+ P YSP+S +YTP
Sbjct: 1781 TPSSPSYSPSSPSYSPTSP-KYTP 1803
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1598 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1657
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1658 SPSYSPTSPSYSPTSP-SYSP 1677
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1651 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1710
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1711 SPTSPNYTPTSPSYSPTSP-SYSP 1733
Score = 105 bits (262), Expect = 3e-21
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSP+SP Y+P+SP S SP Y
Sbjct: 1672 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSY 1731
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1732 SPTSPNYTPTSPNYSPTSP-SYSP 1754
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1552 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1611
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1612 YSPTSPSYSPTSPSYSPTSP-SYSP 1635
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1815 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1874
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1875 SPTYSPTSPKYSPTSP-TYSP 1894
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1836 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1895
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1896 SPKGSTYSPTSPGYSPTS 1913
Score = 102 bits (253), Expect = 3e-20
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ R +P SP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP
Sbjct: 1763 SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY 1822
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP +T +Y+P
Sbjct: 1823 SPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1852
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1623 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1682
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1683 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1712
Score = 98.2 bits (243), Expect = 5e-19
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 1791 SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 1850
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 1851 SPTSPTYSPTSPVYTPTSP-KYSP 1873
Score = 97.1 bits (240), Expect = 1e-18
Identities = 48/81 (59%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSP+SP Y+P SP+Y+PSSP+YSPSSP S SP Y+P
Sbjct: 1745 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1804
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSP+ P Y+P+S +Y+P
Sbjct: 1805 SPSYSPSSPEYTPTSP-KYSP 1824
Score = 96.7 bits (239), Expect = 1e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1850 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1906
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1907 PGYSPTSPTYSLTSPA-ISPEDSDEEN 1932
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1822 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1881
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1882 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1911
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1524 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1583
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1584 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1628
Score = 62.8 bits (151), Expect = 2e-08
Identities = 34/61 (55%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP S
Sbjct: 1875 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPEDS 1928
Query: 443 D 441
D
Sbjct: 1929 D 1929
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1508 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1565
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1566 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1593
[36][TOP]
>UniRef100_UPI0000DA33D8 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Rattus norvegicus RepID=UPI0000DA33D8
Length = 1970
Score = 111 bits (278), Expect = 4e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNY+PTSPSYSPTSPSYSP+SP Y+P+SP S SP Y
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSY 1790
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS +YTP
Sbjct: 1791 SPTSPSYSPTSPSYSPSSP-RYTP 1813
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1671
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1672 SPTSPSYSPTSPSYSPTSP-SYSP 1694
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1713
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1714 SPTSPSYSPTSPSYSPTSP-SYSP 1736
Score = 109 bits (272), Expect = 2e-22
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y
Sbjct: 1759 SPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTY 1818
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
+PS+ YSP+ P YSP+S +YTP
Sbjct: 1819 TPSSPSYSPSSPSYSPTSP-KYTP 1841
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSP-SYSP 1715
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1748
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1749 SPTSPNYTPTSPSYSPTSP-SYSP 1771
Score = 105 bits (262), Expect = 3e-21
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSP+SP Y+P+SP S SP Y
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSY 1769
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1770 SPTSPNYTPTSPNYSPTSP-SYSP 1792
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSP-SYSP 1673
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1853 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1913 SPTYSPTSPKYSPTSP-TYSP 1932
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1934 SPKGSTYSPTSPGYSPTS 1951
Score = 102 bits (253), Expect = 3e-20
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ R +P SP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP
Sbjct: 1801 SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY 1860
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP +T +Y+P
Sbjct: 1861 SPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1890
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1661 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1720
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1721 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1750
Score = 98.2 bits (243), Expect = 5e-19
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 1829 SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 1888
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 1889 SPTSPTYSPTSPVYTPTSP-KYSP 1911
Score = 97.1 bits (240), Expect = 1e-18
Identities = 48/81 (59%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSP+SP Y+P SP+Y+PSSP+YSPSSP S SP Y+P
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSP+ P Y+P+S +Y+P
Sbjct: 1843 SPSYSPSSPEYTPTSP-KYSP 1862
Score = 96.7 bits (239), Expect = 1e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1888 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1944
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1945 PGYSPTSPTYSLTSPA-ISPEDSDEEN 1970
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1860 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1919
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1920 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1949
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1562 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1621
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
Score = 62.8 bits (151), Expect = 2e-08
Identities = 34/61 (55%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP S
Sbjct: 1913 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPEDS 1966
Query: 443 D 441
D
Sbjct: 1967 D 1967
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1546 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1631
[37][TOP]
>UniRef100_O35559 DNA-directed RNA polymerase n=1 Tax=Cricetulus griseus
RepID=O35559_CRIGR
Length = 1970
Score = 111 bits (278), Expect = 4e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNY+PTSPSYSPTSPSYSP+SP Y+P+SP S SP Y
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSY 1790
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS +YTP
Sbjct: 1791 SPTSPSYSPTSPSYSPSSP-RYTP 1813
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1671
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1672 SPTSPSYSPTSPSYSPTSP-SYSP 1694
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1713
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1714 SPTSPSYSPTSPSYSPTSP-SYSP 1736
Score = 109 bits (272), Expect = 2e-22
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y
Sbjct: 1759 SPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTY 1818
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
+PS+ YSP+ P YSP+S +YTP
Sbjct: 1819 TPSSPSYSPSSPSYSPTSP-KYTP 1841
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSP-SYSP 1715
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1748
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1749 SPTSPNYTPTSPSYSPTSP-SYSP 1771
Score = 105 bits (262), Expect = 3e-21
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSP+SP Y+P+SP S SP Y
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSY 1769
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1770 SPTSPNYTPTSPNYSPTSP-SYSP 1792
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSP-SYSP 1673
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1853 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1913 SPTYSPTSPKYSPTSP-TYSP 1932
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1934 SPKGSTYSPTSPGYSPTS 1951
Score = 102 bits (253), Expect = 3e-20
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ R +P SP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP
Sbjct: 1801 SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY 1860
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP +T +Y+P
Sbjct: 1861 SPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1890
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1661 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1720
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1721 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1750
Score = 98.2 bits (243), Expect = 5e-19
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 1829 SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 1888
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 1889 SPTSPTYSPTSPVYTPTSP-KYSP 1911
Score = 97.1 bits (240), Expect = 1e-18
Identities = 48/81 (59%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSP+SP Y+P SP+Y+PSSP+YSPSSP S SP Y+P
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSP+ P Y+P+S +Y+P
Sbjct: 1843 SPSYSPSSPEYTPTSP-KYSP 1862
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1888 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1944
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1945 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1970
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1860 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1919
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1920 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1949
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1562 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1621
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1913 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1963
Query: 443 DYS 435
D S
Sbjct: 1964 DDS 1966
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1546 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1631
[38][TOP]
>UniRef100_O08847 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=O08847_MOUSE
Length = 1966
Score = 111 bits (278), Expect = 4e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNY+PTSPSYSPTSPSYSP+SP Y+P+SP S SP Y
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSY 1790
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS +YTP
Sbjct: 1791 SPTSPSYSPTSPSYSPSSP-RYTP 1813
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1671
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1672 SPTSPSYSPTSPSYSPTSP-SYSP 1694
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1713
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1714 SPTSPSYSPTSPSYSPTSP-SYSP 1736
Score = 109 bits (272), Expect = 2e-22
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y
Sbjct: 1759 SPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTY 1818
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
+PS+ YSP+ P YSP+S +YTP
Sbjct: 1819 TPSSPSYSPSSPSYSPTSP-KYTP 1841
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSP-SYSP 1715
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1748
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1749 SPTSPNYTPTSPSYSPTSP-SYSP 1771
Score = 105 bits (262), Expect = 3e-21
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSP+SP Y+P+SP S SP Y
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSY 1769
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1770 SPTSPNYTPTSPNYSPTSP-SYSP 1792
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSP-SYSP 1673
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1853 YTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1913 SPTYSPTSPKYSPTSP-TYSP 1932
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1934 SPKGSTYSPTSPGYSPTS 1951
Score = 102 bits (253), Expect = 3e-20
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ R +P SP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP
Sbjct: 1801 SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKY 1860
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP +T +Y+P
Sbjct: 1861 SPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1890
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1661 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1720
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1721 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1750
Score = 97.8 bits (242), Expect = 6e-19
Identities = 52/84 (61%), Positives = 62/84 (73%), Gaps = 5/84 (5%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPT+P YSPTSP+YSPTSP Y+P+SP YSP+SP S SP YSP
Sbjct: 1867 YSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPT 1926
Query: 431 SAGYSPTLPG---YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1927 SPTYSPTSPKGSTYSPTSPG-YSP 1949
Score = 97.1 bits (240), Expect = 1e-18
Identities = 48/81 (59%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSP+SP Y+P SP+Y+PSSP+YSPSSP S SP Y+P
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSP+ P Y+P+S +Y+P
Sbjct: 1843 SPSYSPSSPEYTPASP-KYSP 1862
Score = 96.3 bits (238), Expect = 2e-18
Identities = 48/84 (57%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+P SP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 1829 SPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 1888
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 1889 SPTSPTYSPTSPVYTPTSP-KYSP 1911
Score = 94.7 bits (234), Expect = 5e-18
Identities = 48/74 (64%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1888 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1944
Query: 428 AGYSPTLPGYSPSS 387
GYSPT P YS +S
Sbjct: 1945 PGYSPTSPTYSLTS 1958
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1562 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1621
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
Score = 75.5 bits (184), Expect = 3e-12
Identities = 39/64 (60%), Positives = 47/64 (73%), Gaps = 4/64 (6%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSP---SYSPSSPTYSPSSPYSSGAS 447
S Y+P++ + SP SP YSPTSP YSPTSP+YSPTSP +YSP+SP YSP+SP S S
Sbjct: 1899 SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTS 1958
Query: 446 PDYS 435
P S
Sbjct: 1959 PAIS 1962
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1546 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1631
[39][TOP]
>UniRef100_B4E3V7 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4E3V7_HUMAN
Length = 1935
Score = 111 bits (278), Expect = 4e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNY+PTSPSYSPTSPSYSP+SP Y+P+SP S SP Y
Sbjct: 1696 SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSY 1755
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS +YTP
Sbjct: 1756 SPTSPSYSPTSPSYSPSSP-RYTP 1778
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1605 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1664
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1665 SPTSPSYSPTSPSYSPTSP-SYSP 1687
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1626 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1685
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1686 SPTSPSYSPTSPSYSPTSP-SYSP 1708
Score = 109 bits (272), Expect = 2e-22
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y
Sbjct: 1724 SPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTY 1783
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
+PS+ YSP+ P YSP+S +YTP
Sbjct: 1784 TPSSPSYSPSSPSYSPTSP-KYTP 1806
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1713
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1714 SPTSPNYTPTSPSYSPTSP-SYSP 1736
Score = 106 bits (265), Expect = 1e-21
Identities = 56/91 (61%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1577 SPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1636
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1637 SPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
Score = 105 bits (262), Expect = 3e-21
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSP+SP Y+P+SP S SP Y
Sbjct: 1675 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSY 1734
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1735 SPTSPNYTPTSPNYSPTSP-SYSP 1757
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP+ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1839 YSPTGPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPT 1898
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1899 SPKGSTYSPTSPGYSPTS 1916
Score = 101 bits (252), Expect = 4e-20
Identities = 50/81 (61%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPT P+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1818 YTPTSPKFSPTSPKYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1877
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1878 SPTYSPTSPQYSPTSP-TYSP 1897
Score = 100 bits (248), Expect = 1e-19
Identities = 52/85 (61%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+S YSP+SP S SP
Sbjct: 1555 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPS 1614
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1615 YSPTSPSYSPTSPSYSPTSP-SYSP 1638
Score = 99.4 bits (246), Expect = 2e-19
Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ R +P SP YSP+SP+YSPTSP Y+PTSP YSPSSP Y+P+SP
Sbjct: 1766 SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPTSPKF 1825
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP +T +Y+P
Sbjct: 1826 SPTSPKYSPTSPKYSPTGPTYSP-TTPKYSP 1855
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1853 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTYSP---TS 1909
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1910 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1935
Score = 95.1 bits (235), Expect = 4e-18
Identities = 46/75 (61%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSP+SP Y+P SP+Y+PSSP+YSPSSP S SP Y+P
Sbjct: 1748 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1807
Query: 431 SAGYSPTLPGYSPSS 387
S YSP+ P Y+P+S
Sbjct: 1808 SPPYSPSSPEYTPTS 1822
Score = 95.1 bits (235), Expect = 4e-18
Identities = 47/84 (55%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+PTSP +SPTSP YSP+SP YSP+ P S +P Y
Sbjct: 1794 SPSYSPTSPKYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSPTSPKYSPTGPTYSPTTPKY 1853
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 1854 SPTSPTYSPTSPVYTPTSP-KYSP 1876
Score = 84.3 bits (207), Expect = 7e-15
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPY 462
S A+SP S P+SPY P+ SP+YSPTSP+Y P SP Y+P SP+YSP+SP
Sbjct: 1527 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1586
Query: 461 SSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S+ YSPT P YSP+S Y+P
Sbjct: 1587 YSPTSPSYSPTSSNYSPTSPSYSPTSP-SYSP 1617
Score = 62.8 bits (151), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1878 SPTYSPTSPQ------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1928
Query: 443 DYS 435
D S
Sbjct: 1929 DDS 1931
Score = 55.1 bits (131), Expect = 5e-06
Identities = 46/96 (47%), Positives = 54/96 (56%), Gaps = 17/96 (17%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSS----PY 462
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+S P
Sbjct: 1511 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1568
Query: 461 SSGA----SPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S G SP YSP S YSPT P YSP+S+ Y+P
Sbjct: 1569 SPGGYTPQSPSYSPTSPSYSPTSPSYSPTSS-NYSP 1603
[40][TOP]
>UniRef100_B4DET1 cDNA FLJ53860, highly similar to DNA-directed RNA polymerase II
largest subunit (EC 2.7.7.6) n=1 Tax=Homo sapiens
RepID=B4DET1_HUMAN
Length = 855
Score = 111 bits (278), Expect = 4e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNY+PTSPSYSPTSPSYSP+SP Y+P+SP S SP Y
Sbjct: 630 SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSY 689
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS +YTP
Sbjct: 690 SPTSPSYSPTSPSYSPSSP-RYTP 712
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 511 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 570
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 571 SPTSPSYSPTSPSYSPTSP-SYSP 593
Score = 110 bits (274), Expect = 1e-22
Identities = 60/106 (56%), Positives = 74/106 (69%), Gaps = 2/106 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y
Sbjct: 658 SPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTY 717
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
+PS+ YSP+ P YSP+S +YTP K T K + K +P
Sbjct: 718 TPSSPSYSPSSPSYSPTSP-KYTP-TSPKYSPTSPKYSPTSPKYSP 761
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 553 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 612
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 613 SPTSPSYSPTSPSYSPTSP-SYSP 635
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 535 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 594
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 595 SPSYSPTSPSYSPTSP-SYSP 614
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 588 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 647
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 648 SPTSPNYTPTSPSYSPTSP-SYSP 670
Score = 105 bits (262), Expect = 3e-21
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSP+SP Y+P+SP S SP Y
Sbjct: 609 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSY 668
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 669 SPTSPNYTPTSPNYSPTSP-SYSP 691
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 489 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 548
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 549 YSPTSPSYSPTSPSYSPTSP-SYSP 572
Score = 102 bits (253), Expect = 3e-20
Identities = 50/81 (61%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP+
Sbjct: 738 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 797
Query: 428 A-GYSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 798 GPTYSPTSPKYSPTSP-TYSP 817
Score = 100 bits (250), Expect = 7e-20
Identities = 49/78 (62%), Positives = 58/78 (74%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+ PTYSP+SP S SP YSP+
Sbjct: 759 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSPT 818
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 819 SPKGSTYSPTSPGYSPTS 836
Score = 99.8 bits (247), Expect = 2e-19
Identities = 51/84 (60%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S Y+PS+ SP+SP YSPTSP Y+PTSP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 714 SPTYTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 773
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 774 SPTSPTYSPTSPVYTPTSP-KYSP 796
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 560 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 619
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 620 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 649
Score = 94.7 bits (234), Expect = 5e-18
Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPT P+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 773 YSPTSPTYSPTSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 829
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 830 PGYSPTSPTYSLTSPA-ISPDDSDEEN 855
Score = 90.5 bits (223), Expect = 1e-16
Identities = 51/91 (56%), Positives = 61/91 (67%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S P YSP
Sbjct: 745 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTGPTYSPT 804
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 805 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 834
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 461 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 520
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 521 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 565
Score = 85.9 bits (211), Expect = 2e-15
Identities = 54/112 (48%), Positives = 65/112 (58%), Gaps = 30/112 (26%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYS-------------------- 498
S +YSP++ +P SP YSPTSP+YSPTSPSYSPTSPSYS
Sbjct: 665 SPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSY 724
Query: 497 --------PSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P+SP Y+P+SP S SP YSP S YSPT P YSP +T +Y+P
Sbjct: 725 SPSSPSYSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 775
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 445 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 502
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 503 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 530
[41][TOP]
>UniRef100_A6NN93 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=A6NN93_HUMAN
Length = 1970
Score = 111 bits (278), Expect = 4e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNY+PTSPSYSPTSPSYSP+SP Y+P+SP S SP Y
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSY 1790
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS +YTP
Sbjct: 1791 SPTSPSYSPTSPSYSPSSP-RYTP 1813
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1671
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1672 SPTSPSYSPTSPSYSPTSP-SYSP 1694
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1713
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1714 SPTSPSYSPTSPSYSPTSP-SYSP 1736
Score = 109 bits (272), Expect = 2e-22
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y
Sbjct: 1759 SPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTY 1818
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
+PS+ YSP+ P YSP+S +YTP
Sbjct: 1819 TPSSPSYSPSSPSYSPASP-KYTP 1841
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSP-SYSP 1715
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1748
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1749 SPTSPNYTPTSPSYSPTSP-SYSP 1771
Score = 105 bits (262), Expect = 3e-21
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSP+SP Y+P+SP S SP Y
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSY 1769
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1770 SPTSPNYTPTSPNYSPTSP-SYSP 1792
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSP-SYSP 1673
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1853 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1913 SPTYSPTSPKYSPTSP-TYSP 1932
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1934 SPKGSTYSPTSPGYSPTS 1951
Score = 100 bits (248), Expect = 1e-19
Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ R +P SP YSP+SP+YSP SP Y+PTSPSYSPSSP Y+P+SP
Sbjct: 1801 SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTSPKY 1860
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP +T +Y+P
Sbjct: 1861 SPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1890
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1661 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1720
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1721 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1750
Score = 98.6 bits (244), Expect = 4e-19
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSP+SP Y+P SP+Y+PSSP+YSPSSP S ASP Y+P
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPT 1842
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSP+ P Y+P+S +Y+P
Sbjct: 1843 SPSYSPSSPEYTPTSP-KYSP 1862
Score = 98.2 bits (243), Expect = 5e-19
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 1829 SPSYSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 1888
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 1889 SPTSPTYSPTSPVYTPTSP-KYSP 1911
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1888 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1944
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1945 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1970
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1860 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1919
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1920 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1949
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1562 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1621
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1913 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1963
Query: 443 DYS 435
D S
Sbjct: 1964 DDS 1966
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1546 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1631
[42][TOP]
>UniRef100_B5RSM9 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RSM9_DEBHA
Length = 1749
Score = 111 bits (278), Expect = 4e-23
Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1632 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQY 1691
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S QY+P
Sbjct: 1692 SPTSPSYSPTSPSYSPTSP-QYSP 1714
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1604 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1663
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S QY+P
Sbjct: 1664 SPTSPSYSPTSPSYSPTSP-QYSP 1686
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1562 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1621
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1622 SPTSPSYSPTSPSYSPTSP-SYSP 1644
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1583 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1642
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1643 SPTSPSYSPTSPSYSPTSP-SYSP 1665
Score = 103 bits (257), Expect = 1e-20
Identities = 64/112 (57%), Positives = 73/112 (65%), Gaps = 15/112 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP SP S
Sbjct: 1639 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSY 1698
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP------HEGDKKDKTGKKDAS 324
S SP YSP S YSPT P YSP+S QY+P E + K K KKD +
Sbjct: 1699 SPTSPSYSPTSPQYSPTSPQYSPTSP-QYSPGSPSYSPESESKSKDEKKDGN 1749
Score = 99.8 bits (247), Expect = 2e-19
Identities = 52/79 (65%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 426
SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1548 SPGYGGTSPT--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1605
Query: 425 GYSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 1606 SYSPTSPSYSPTSP-SYSP 1623
Score = 87.0 bits (214), Expect = 1e-15
Identities = 47/82 (57%), Positives = 54/82 (65%), Gaps = 11/82 (13%)
Frame = -1
Query: 581 SPASPYS----------PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP 432
SP SP+S TSP Y TSP+YSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1529 SPTSPFSYGATSPSFGGVTSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1588
Query: 431 -SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1589 TSPSYSPTSPSYSPTSP-SYSP 1609
[43][TOP]
>UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E6J4_LODEL
Length = 1745
Score = 111 bits (278), Expect = 4e-23
Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1635 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQY 1694
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S QY+P
Sbjct: 1695 SPTSPSYSPTSPSYSPTSP-QYSP 1717
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1607 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1666
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S QY+P
Sbjct: 1667 SPTSPSYSPTSPSYSPTSP-QYSP 1689
Score = 109 bits (273), Expect = 2e-22
Identities = 57/93 (61%), Positives = 65/93 (69%), Gaps = 9/93 (9%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SP YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1535 SPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1594
Query: 464 YSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1595 SYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1626
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1565 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1624
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1625 SPTSPSYSPTSPSYSPTSP-SYSP 1647
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1586 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1645
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1646 SPTSPSYSPTSPSYSPTSP-SYSP 1668
Score = 103 bits (256), Expect = 1e-20
Identities = 52/79 (65%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 426
SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1528 SPGYGGTSPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1587
Query: 425 GYSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 1588 SYSPTSPSYSPTSP-SYSP 1605
Score = 100 bits (249), Expect = 1e-19
Identities = 62/105 (59%), Positives = 70/105 (66%), Gaps = 10/105 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP SP S
Sbjct: 1642 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSY 1701
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKT-GKKD 330
S SP YSP S YSPT P YSP S Y+P + K K+ KKD
Sbjct: 1702 SPTSPSYSPTSPQYSPTSPQYSPRSP-NYSPKSPEYKPKSPSKKD 1745
Score = 88.6 bits (218), Expect = 4e-16
Identities = 50/85 (58%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +P SP Y TSP Y SPTSPSYSPTSPSYSP+SP+YSP+SP S SP
Sbjct: 1517 SYGTTPGYGGTSPG--YGGTSPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1574
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1575 YSPTSPSYSPTSPSYSPTSP-SYSP 1598
[44][TOP]
>UniRef100_P08775 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Mus musculus
RepID=RPB1_MOUSE
Length = 1970
Score = 111 bits (278), Expect = 4e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNY+PTSPSYSPTSPSYSP+SP Y+P+SP S SP Y
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSY 1790
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS +YTP
Sbjct: 1791 SPTSPSYSPTSPSYSPSSP-RYTP 1813
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1671
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1672 SPTSPSYSPTSPSYSPTSP-SYSP 1694
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1713
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1714 SPTSPSYSPTSPSYSPTSP-SYSP 1736
Score = 109 bits (272), Expect = 2e-22
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y
Sbjct: 1759 SPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTY 1818
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
+PS+ YSP+ P YSP+S +YTP
Sbjct: 1819 TPSSPSYSPSSPSYSPTSP-KYTP 1841
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSP-SYSP 1715
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1748
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1749 SPTSPNYTPTSPSYSPTSP-SYSP 1771
Score = 105 bits (262), Expect = 3e-21
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSP+SP Y+P+SP S SP Y
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSY 1769
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1770 SPTSPNYTPTSPNYSPTSP-SYSP 1792
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSP-SYSP 1673
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1853 YTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1913 SPTYSPTSPKYSPTSP-TYSP 1932
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1934 SPKGSTYSPTSPGYSPTS 1951
Score = 102 bits (253), Expect = 3e-20
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ R +P SP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP
Sbjct: 1801 SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKY 1860
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP +T +Y+P
Sbjct: 1861 SPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1890
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1661 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1720
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1721 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1750
Score = 97.1 bits (240), Expect = 1e-18
Identities = 48/81 (59%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSP+SP Y+P SP+Y+PSSP+YSPSSP S SP Y+P
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSP+ P Y+P+S +Y+P
Sbjct: 1843 SPSYSPSSPEYTPASP-KYSP 1862
Score = 96.3 bits (238), Expect = 2e-18
Identities = 48/84 (57%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+P SP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 1829 SPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 1888
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 1889 SPTSPTYSPTSPVYTPTSP-KYSP 1911
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1888 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1944
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1945 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1970
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1860 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1919
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1920 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1949
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1562 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1621
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1913 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1963
Query: 443 DYS 435
D S
Sbjct: 1964 DDS 1966
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1546 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1631
[45][TOP]
>UniRef100_P24928 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Euarchontoglires
RepID=RPB1_HUMAN
Length = 1970
Score = 111 bits (278), Expect = 4e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNY+PTSPSYSPTSPSYSP+SP Y+P+SP S SP Y
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSY 1790
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS +YTP
Sbjct: 1791 SPTSPSYSPTSPSYSPSSP-RYTP 1813
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1671
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1672 SPTSPSYSPTSPSYSPTSP-SYSP 1694
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1713
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1714 SPTSPSYSPTSPSYSPTSP-SYSP 1736
Score = 109 bits (272), Expect = 2e-22
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y
Sbjct: 1759 SPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTY 1818
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
+PS+ YSP+ P YSP+S +YTP
Sbjct: 1819 TPSSPSYSPSSPSYSPTSP-KYTP 1841
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSP-SYSP 1715
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1748
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1749 SPTSPNYTPTSPSYSPTSP-SYSP 1771
Score = 105 bits (262), Expect = 3e-21
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSP+SP Y+P+SP S SP Y
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSY 1769
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1770 SPTSPNYTPTSPNYSPTSP-SYSP 1792
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSP-SYSP 1673
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1853 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1913 SPTYSPTSPKYSPTSP-TYSP 1932
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1934 SPKGSTYSPTSPGYSPTS 1951
Score = 102 bits (253), Expect = 3e-20
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ R +P SP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP
Sbjct: 1801 SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY 1860
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP +T +Y+P
Sbjct: 1861 SPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 1890
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1661 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1720
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1721 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1750
Score = 98.2 bits (243), Expect = 5e-19
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 1829 SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 1888
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 1889 SPTSPTYSPTSPVYTPTSP-KYSP 1911
Score = 97.1 bits (240), Expect = 1e-18
Identities = 48/81 (59%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSP+SP Y+P SP+Y+PSSP+YSPSSP S SP Y+P
Sbjct: 1783 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 1842
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSP+ P Y+P+S +Y+P
Sbjct: 1843 SPSYSPSSPEYTPTSP-KYSP 1862
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1888 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1944
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1945 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1970
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1860 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1919
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1920 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1949
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1562 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1621
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1913 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1963
Query: 443 DYS 435
D S
Sbjct: 1964 DDS 1966
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1546 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1631
[46][TOP]
>UniRef100_P11414 DNA-directed RNA polymerase II subunit RPB1 (Fragment) n=1
Tax=Cricetulus griseus RepID=RPB1_CRIGR
Length = 467
Score = 111 bits (278), Expect = 4e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNY+PTSPSYSPTSPSYSP+SP Y+P+SP S SP Y
Sbjct: 228 SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSY 287
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS +YTP
Sbjct: 288 SPTSPSYSPTSPSYSPSSP-RYTP 310
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 109 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 168
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 169 SPTSPSYSPTSPSYSPTSP-SYSP 191
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 151 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 210
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 211 SPTSPSYSPTSPSYSPTSP-SYSP 233
Score = 109 bits (272), Expect = 2e-22
Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP Y+PTSPNYSPTSPSYSPTSPSYSP+SP+YSPSSP + SP Y
Sbjct: 256 SPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTY 315
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
+PS+ YSP+ P YSP+S +YTP
Sbjct: 316 TPSSPSYSPSSPSYSPTSP-KYTP 338
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 133 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 192
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 193 SPSYSPTSPSYSPTSP-SYSP 212
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 186 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 245
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 246 SPTSPNYTPTSPSYSPTSP-SYSP 268
Score = 105 bits (262), Expect = 3e-21
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSP+SP Y+P+SP S SP Y
Sbjct: 207 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSY 266
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 267 SPTSPNYTPTSPNYSPTSP-SYSP 289
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 87 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 146
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 147 YSPTSPSYSPTSPSYSPTSP-SYSP 170
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 350 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 409
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 410 SPTYSPTSPKYSPTSP-TYSP 429
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 371 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 430
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 431 SPKGSTYSPTSPGYSPTS 448
Score = 102 bits (253), Expect = 3e-20
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ R +P SP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP
Sbjct: 298 SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY 357
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP +T +Y+P
Sbjct: 358 SPTSPKYSPTSPKYSPTSPTYSP-TTPKYSP 387
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 158 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 217
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 218 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 247
Score = 98.2 bits (243), Expect = 5e-19
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 326 SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 385
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 386 SPTSPTYSPTSPVYTPTSP-KYSP 408
Score = 97.1 bits (240), Expect = 1e-18
Identities = 48/81 (59%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSP+SP Y+P SP+Y+PSSP+YSPSSP S SP Y+P
Sbjct: 280 YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPT 339
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSP+ P Y+P+S +Y+P
Sbjct: 340 SPSYSPSSPEYTPTSP-KYSP 359
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 385 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 441
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 442 PGYSPTSPTYSLTSPA-ISPDDSDEEN 467
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 357 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 416
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 417 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 446
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 59 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 118
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 119 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 163
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 410 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 460
Query: 443 DYS 435
D S
Sbjct: 461 DDS 463
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 43 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 100
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 101 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 128
[47][TOP]
>UniRef100_UPI0001796DD3 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase II subunit A) (DNA-directed RNA polymerase III
largest subunit) n=1 Tax=Equus caballus
RepID=UPI0001796DD3
Length = 1834
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1671
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1672 SPTSPSYSPTSPSYSPTSP-SYSP 1694
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1713
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1714 SPTSPSYSPTSPSYSPTSP-SYSP 1736
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSP-SYSP 1715
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1748
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1749 SPTSPNYTPTSPSYSPTSP-SYSP 1771
Score = 108 bits (270), Expect = 4e-22
Identities = 54/84 (64%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSP+Y+PTSPSYSP+SP+YSP+SP + SP+Y
Sbjct: 1724 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNY 1783
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1784 SPTSPSYSPTTPSYSPTSP-SYSP 1806
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSP-SYSP 1673
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1661 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1720
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1721 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1750
Score = 98.2 bits (243), Expect = 5e-19
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 6/88 (6%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP
Sbjct: 1696 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSP----T 1751
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP+Y+P S YSPT P YSP+S YTP
Sbjct: 1752 SPNYTPTSPSYSPTSPSYSPTSP-NYTP 1778
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/78 (60%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ SP SP YSPTSPNY+PTSP+YSPTSPSYSP++P+YSP+SP S SP YSP
Sbjct: 1755 YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPTSPSYSPTSPGYSPT 1814
Query: 431 SAGYSPTLPGYSPSSTGQ 378
S YS T P SP + +
Sbjct: 1815 SPTYSLTSPAISPDDSDE 1832
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1562 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1621
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1546 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1631
[48][TOP]
>UniRef100_UPI0000E24648 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Pan troglodytes RepID=UPI0000E24648
Length = 1913
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1671
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1672 SPTSPSYSPTSPSYSPTSP-SYSP 1694
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSP-SYSP 1715
Score = 105 bits (261), Expect = 4e-21
Identities = 56/90 (62%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S S Y
Sbjct: 1668 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSQSY 1727
Query: 437 SP-------SAGYSPTLPGYSPSSTGQYTP 369
P S YSPT P YSPSS +YTP
Sbjct: 1728 HPTVVDSSTSPSYSPTSPSYSPSSP-RYTP 1756
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSP-SYSP 1673
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1796 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1855
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1856 SPTYSPTSPKYSPTSP-TYSP 1875
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1817 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1876
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1877 SPKGSTYSPTSPGYSPTS 1894
Score = 100 bits (250), Expect = 7e-20
Identities = 52/84 (61%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S Y+PS+ SP+SP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP Y
Sbjct: 1758 SPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKY 1817
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1818 SPTSPTYSPTTPKYSPTSP-TYSP 1840
Score = 99.8 bits (247), Expect = 2e-19
Identities = 50/86 (58%), Positives = 67/86 (77%), Gaps = 2/86 (2%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S S +YSP++ SP+SP Y+P SP Y+P+SPSYSP+SPSYSP+SP Y+P+SP S +SP
Sbjct: 1735 STSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSP 1794
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
+Y+P S YSPT P YSP+S +Y+P
Sbjct: 1795 EYTPTSPKYSPTSPKYSPTSP-KYSP 1819
Score = 99.4 bits (246), Expect = 2e-19
Identities = 60/119 (50%), Positives = 72/119 (60%), Gaps = 15/119 (12%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTS-------------PNYSPTSPSYSPTSPSYSPSSPTYS 477
S +YSP++ SP SP YSPTS P+YSPTSPSYSP+SP Y+P SPTY+
Sbjct: 1703 SPSYSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTSPSYSPTSPSYSPSSPRYTPQSPTYT 1762
Query: 476 PSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
PSSP S +SP YSP S Y+PT P YSPSS +YTP K T K + K +P
Sbjct: 1763 PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSP-EYTP-TSPKYSPTSPKYSPTSPKYSP 1819
Score = 98.6 bits (244), Expect = 4e-19
Identities = 55/85 (64%), Positives = 62/85 (72%), Gaps = 9/85 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1640 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1699
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSS 387
S SP YSP S YSPT P YSP+S
Sbjct: 1700 SPTSPSYSPTSPSYSPTSPSYSPTS 1724
Score = 96.7 bits (239), Expect = 1e-18
Identities = 55/104 (52%), Positives = 67/104 (64%), Gaps = 22/104 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSP--------------------TSPSYS 498
S +YSP++ SP SP YSPTSP+YSPTSPSYSP TSPSYS
Sbjct: 1682 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSQSYHPTVVDSSTSPSYS 1741
Query: 497 PSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
P+SP+YSPSSP + SP Y+PS+ YSP+ P YSP+S +YTP
Sbjct: 1742 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSP-KYTP 1784
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1831 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1887
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1888 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1913
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1803 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1862
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1863 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1892
Score = 89.0 bits (219), Expect = 3e-16
Identities = 51/88 (57%), Positives = 60/88 (68%), Gaps = 6/88 (6%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S +YSPS+ SP SP Y+PTSP+YSP+SP Y+PTSP YSP+SP YSP SP
Sbjct: 1765 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSP----T 1820
Query: 449 SPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
SP YSP+ YSPT P YSP+S YTP
Sbjct: 1821 SPTYSPTTPKYSPTSPTYSPTSP-VYTP 1847
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1562 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1621
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1856 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1906
Query: 443 DYS 435
D S
Sbjct: 1907 DDS 1909
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1546 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1631
[49][TOP]
>UniRef100_UPI00005A0B2B PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 22 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2B
Length = 1892
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1597 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1656
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1657 SPTSPSYSPTSPSYSPTSP-SYSP 1679
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1639 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1698
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1699 SPTSPSYSPTSPSYSPTSP-SYSP 1721
Score = 108 bits (271), Expect = 3e-22
Identities = 57/91 (62%), Positives = 67/91 (73%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1674 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1733
Query: 437 SP--------SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S +YTP
Sbjct: 1734 SPSRPNYTPTSPSYSPTSPSYSPTSP-KYTP 1763
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1681 SPSYSPTSPSYSPTSP-SYSP 1700
Score = 103 bits (257), Expect = 1e-20
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSPS +P SP YSPTSP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP
Sbjct: 1733 YSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1792
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP +T +Y+P
Sbjct: 1793 SPKYSPTSPTYSP-TTPKYSP 1812
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1575 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1634
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSP-SYSP 1658
Score = 102 bits (255), Expect = 2e-20
Identities = 51/84 (60%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP Y
Sbjct: 1709 SPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSY 1768
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ Y+PT P YSP+S +Y+P
Sbjct: 1769 SPSSPEYTPTSPKYSPTSP-KYSP 1791
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1775 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1834
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1835 SPTYSPTSPKYSPTSP-TYSP 1854
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1796 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1855
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1856 SPKGSTYSPTSPGYSPTS 1873
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1646 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1705
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1706 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1735
Score = 98.2 bits (243), Expect = 5e-19
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 1751 SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 1810
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 1811 SPTSPTYSPTSPVYTPTSP-KYSP 1833
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1810 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1866
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1867 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1892
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1782 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1841
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1842 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1871
Score = 87.4 bits (215), Expect = 9e-16
Identities = 52/98 (53%), Positives = 60/98 (61%), Gaps = 16/98 (16%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPT---------------SPSYSPTSPSYSPSSPTY 480
S A+SP+ SP SP SP+YSPT SPSYSPTSPSYSP+SP+Y
Sbjct: 1557 SPAWSPTPG--SPGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSY 1614
Query: 479 SPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1615 SPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1651
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1835 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1885
Query: 443 DYS 435
D S
Sbjct: 1886 DDS 1888
[50][TOP]
>UniRef100_UPI00005A0B2A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 21 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2A
Length = 1896
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1601 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1660
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1661 SPTSPSYSPTSPSYSPTSP-SYSP 1683
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1643 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1702
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1703 SPTSPSYSPTSPSYSPTSP-SYSP 1725
Score = 108 bits (271), Expect = 3e-22
Identities = 57/91 (62%), Positives = 67/91 (73%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1678 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1737
Query: 437 SP--------SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S +YTP
Sbjct: 1738 SPSRPNYTPTSPSYSPTSPSYSPTSP-KYTP 1767
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1625 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1684
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1685 SPSYSPTSPSYSPTSP-SYSP 1704
Score = 103 bits (257), Expect = 1e-20
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSPS +P SP YSPTSP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP
Sbjct: 1737 YSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1796
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP +T +Y+P
Sbjct: 1797 SPKYSPTSPTYSP-TTPKYSP 1816
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1579 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1638
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1639 YSPTSPSYSPTSPSYSPTSP-SYSP 1662
Score = 102 bits (255), Expect = 2e-20
Identities = 51/84 (60%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP Y
Sbjct: 1713 SPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSY 1772
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ Y+PT P YSP+S +Y+P
Sbjct: 1773 SPSSPEYTPTSPKYSPTSP-KYSP 1795
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1779 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1838
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1839 SPTYSPTSPKYSPTSP-TYSP 1858
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1800 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1859
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1860 SPKGSTYSPTSPGYSPTS 1877
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1650 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1709
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1710 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1739
Score = 98.2 bits (243), Expect = 5e-19
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 1755 SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 1814
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 1815 SPTSPTYSPTSPVYTPTSP-KYSP 1837
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1814 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1870
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1871 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1896
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1786 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1845
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1846 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1875
Score = 87.4 bits (215), Expect = 9e-16
Identities = 52/98 (53%), Positives = 60/98 (61%), Gaps = 16/98 (16%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPT---------------SPSYSPTSPSYSPSSPTY 480
S A+SP+ SP SP SP+YSPT SPSYSPTSPSYSP+SP+Y
Sbjct: 1561 SPAWSPTPG--SPGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSY 1618
Query: 479 SPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1619 SPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1655
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1839 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1889
Query: 443 DYS 435
D S
Sbjct: 1890 DDS 1892
[51][TOP]
>UniRef100_UPI00005A0B29 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 20 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B29
Length = 1891
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1580 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1639
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1640 SPTSPSYSPTSPSYSPTSP-SYSP 1662
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1622 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1681
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1682 SPTSPSYSPTSPSYSPTSP-SYSP 1704
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1604 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1663
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1664 SPSYSPTSPSYSPTSP-SYSP 1683
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1657 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1716
Query: 437 SPS-AGYSPTLPGYSPSSTGQYTP 369
SPS Y+PT P YSP+S Y+P
Sbjct: 1717 SPSRPNYTPTSPSYSPTSP-SYSP 1739
Score = 105 bits (263), Expect = 2e-21
Identities = 58/108 (53%), Positives = 73/108 (67%), Gaps = 4/108 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+Y
Sbjct: 1692 SPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNY 1751
Query: 437 SP---SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
SP S Y+PT P YSPSS +YTP K T K + K +P
Sbjct: 1752 SPTPTSPKYTPTSPSYSPSSP-EYTP-TSPKYSPTSPKYSPTSPKYSP 1797
Score = 104 bits (260), Expect = 5e-21
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP Y
Sbjct: 1678 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1737
Query: 437 SP-SAGYSPTLPGYSPSSTG-QYTP 369
SP S Y+P P YSP+ T +YTP
Sbjct: 1738 SPTSPNYTPMSPNYSPTPTSPKYTP 1762
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1558 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1617
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1618 YSPTSPSYSPTSPSYSPTSP-SYSP 1641
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1774 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1833
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1834 SPTYSPTSPKYSPTSP-TYSP 1853
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1795 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1854
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1855 SPKGSTYSPTSPGYSPTS 1872
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1629 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1688
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1689 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1718
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1809 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1865
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1866 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1891
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/86 (59%), Positives = 62/86 (72%), Gaps = 4/86 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPT--SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S +YSP++ +P SP YSPT SP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP
Sbjct: 1734 SPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1793
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1794 KYSPTSPTYSPTTPKYSPTSP-TYSP 1818
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1781 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1840
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1841 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1870
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1530 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1589
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1590 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1634
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1834 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1884
Query: 443 DYS 435
D S
Sbjct: 1885 DDS 1887
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1514 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1571
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1572 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1599
[52][TOP]
>UniRef100_UPI00005A0B28 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 19 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B28
Length = 1908
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1597 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1656
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1657 SPTSPSYSPTSPSYSPTSP-SYSP 1679
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1639 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1698
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1699 SPTSPSYSPTSPSYSPTSP-SYSP 1721
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1680
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1681 SPSYSPTSPSYSPTSP-SYSP 1700
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1674 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1733
Query: 437 SPS-AGYSPTLPGYSPSSTGQYTP 369
SPS Y+PT P YSP+S Y+P
Sbjct: 1734 SPSRPNYTPTSPSYSPTSP-SYSP 1756
Score = 105 bits (263), Expect = 2e-21
Identities = 58/108 (53%), Positives = 73/108 (67%), Gaps = 4/108 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+Y
Sbjct: 1709 SPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNY 1768
Query: 437 SP---SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
SP S Y+PT P YSPSS +YTP K T K + K +P
Sbjct: 1769 SPTPTSPKYTPTSPSYSPSSP-EYTP-TSPKYSPTSPKYSPTSPKYSP 1814
Score = 104 bits (260), Expect = 5e-21
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP Y
Sbjct: 1695 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1754
Query: 437 SP-SAGYSPTLPGYSPSSTG-QYTP 369
SP S Y+P P YSP+ T +YTP
Sbjct: 1755 SPTSPNYTPMSPNYSPTPTSPKYTP 1779
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1575 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1634
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSP-SYSP 1658
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1791 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1850
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1851 SPTYSPTSPKYSPTSP-TYSP 1870
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1812 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1871
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1872 SPKGSTYSPTSPGYSPTS 1889
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1646 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1705
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1706 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1735
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1826 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1882
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1883 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1908
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/86 (59%), Positives = 62/86 (72%), Gaps = 4/86 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPT--SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S +YSP++ +P SP YSPT SP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP
Sbjct: 1751 SPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1810
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1811 KYSPTSPTYSPTTPKYSPTSP-TYSP 1835
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1798 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1857
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1858 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1887
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1547 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1606
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1607 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1651
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1851 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1901
Query: 443 DYS 435
D S
Sbjct: 1902 DDS 1904
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1531 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1588
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1589 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1616
[53][TOP]
>UniRef100_UPI00005A0B27 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 18 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B27
Length = 1831
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1530 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1589
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1590 SPTSPSYSPTSPSYSPTSP-SYSP 1612
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1572 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1631
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1632 SPTSPSYSPTSPSYSPTSP-SYSP 1654
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1554 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1613
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1614 SPSYSPTSPSYSPTSP-SYSP 1633
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1607 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1666
Query: 437 SPS-AGYSPTLPGYSPSSTGQYTP 369
SPS Y+PT P YSP+S Y+P
Sbjct: 1667 SPSRPNYTPTSPSYSPTSP-SYSP 1689
Score = 104 bits (260), Expect = 5e-21
Identities = 49/83 (59%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+Y
Sbjct: 1642 SPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNY 1701
Query: 437 SPSAGYSPTLPGYSPSSTGQYTP 369
SP+ YSP+ P Y+P+S +Y+P
Sbjct: 1702 SPTPSYSPSSPEYTPTSP-KYSP 1723
Score = 104 bits (259), Expect = 7e-21
Identities = 54/93 (58%), Positives = 65/93 (69%), Gaps = 9/93 (9%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SP+ +YSPS+ +P SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP
Sbjct: 1702 SPTPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1761
Query: 464 YSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+ SP YSP S YSPT P YSP+S Y+P
Sbjct: 1762 VYTPTSPKYSPTSPTYSPTSPKYSPTSP-TYSP 1793
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1508 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1567
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1568 YSPTSPSYSPTSPSYSPTSP-SYSP 1591
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1735 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1794
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1795 SPKGSTYSPTSPGYSPTS 1812
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1579 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1638
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1639 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1668
Score = 97.4 bits (241), Expect = 8e-19
Identities = 50/84 (59%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP+ P Y+PTSP+YSPTSPSYSPTSP+Y+P SP YSP+ YS +SP+Y
Sbjct: 1656 SPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSYSP-SSPEY 1714
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
+P S YSPT P YSP+S +Y+P
Sbjct: 1715 TPTSPKYSPTSPKYSPTSP-KYSP 1737
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1749 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1805
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1806 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1831
Score = 95.5 bits (236), Expect = 3e-18
Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-S 429
Y+P + SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P YSP S
Sbjct: 1694 YTPMSPNYSPTPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1753
Query: 428 AGYSPTLPGYSPSSTGQYTP 369
YSPT P Y+P+S +Y+P
Sbjct: 1754 PTYSPTSPVYTPTSP-KYSP 1772
Score = 94.4 bits (233), Expect = 7e-18
Identities = 52/90 (57%), Positives = 61/90 (67%), Gaps = 8/90 (8%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPT------SPSYSPTSPSYSPSSPTYSPSSPYSS 456
S +YSP++ SP SP Y+P SPNYSPT SP Y+PTSP YSP+SP YSP+SP S
Sbjct: 1677 SPSYSPTSPSYSPTSPNYTPMSPNYSPTPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYS 1736
Query: 455 GASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
SP YSP+ YSPT P YSP+S YTP
Sbjct: 1737 PTSPTYSPTTPKYSPTSPTYSPTSP-VYTP 1765
Score = 94.0 bits (232), Expect = 9e-18
Identities = 54/91 (59%), Positives = 62/91 (68%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYS 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYS P+SP YSPS P
Sbjct: 1614 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNY 1673
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+ SP YSP S YSPT P Y+P S Y+P
Sbjct: 1674 TPTSPSYSPTSPSYSPTSPNYTPMSP-NYSP 1703
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1721 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1780
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1781 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1810
Score = 81.3 bits (199), Expect = 6e-14
Identities = 45/88 (51%), Positives = 54/88 (61%), Gaps = 16/88 (18%)
Frame = -1
Query: 584 LSPASPYSPTSPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYSSGA 450
++P + SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S
Sbjct: 1498 MTPGAAGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1557
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S YSPT P YSP+S Y+P
Sbjct: 1558 SPSYSPTSPSYSPTSPSYSPTSP-SYSP 1584
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1774 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1824
Query: 443 DYS 435
D S
Sbjct: 1825 DDS 1827
[54][TOP]
>UniRef100_UPI00005A0B26 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 17 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B26
Length = 1684
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1507 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1566
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1567 SPTSPSYSPTSPSYSPTSP-SYSP 1589
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1549 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1608
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1609 SPTSPSYSPTSPSYSPTSP-SYSP 1631
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1531 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1590
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1591 SPSYSPTSPSYSPTSP-SYSP 1610
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1584 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1643
Query: 437 SPS-AGYSPTLPGYSPSSTGQYTP 369
SPS Y+PT P YSP+S Y+P
Sbjct: 1644 SPSRPNYTPTSPSYSPTSP-SYSP 1666
Score = 101 bits (252), Expect = 4e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP Y
Sbjct: 1605 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1664
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S Y+P P YSP+S
Sbjct: 1665 SPTSPNYTPMSPNYSPTS 1682
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1556 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1615
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1616 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1645
Score = 96.3 bits (238), Expect = 2e-18
Identities = 53/85 (62%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S AY P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1490 STSPAYEPR----SPGG-YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1544
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1545 YSPTSPSYSPTSPSYSPTSP-SYSP 1568
Score = 94.0 bits (232), Expect = 9e-18
Identities = 54/91 (59%), Positives = 62/91 (68%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYS 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYS P+SP YSPS P
Sbjct: 1591 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNY 1650
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+ SP YSP S YSPT P Y+P S Y+P
Sbjct: 1651 TPTSPSYSPTSPSYSPTSPNYTPMSP-NYSP 1680
Score = 80.9 bits (198), Expect = 8e-14
Identities = 38/59 (64%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ SP SP YSP+ PNY+PTSPSYSPTSPSYSP+SP Y+P SP S SP+
Sbjct: 1626 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1684
[55][TOP]
>UniRef100_UPI00005A0B25 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 16 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B25
Length = 1752
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1507 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1566
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1567 SPTSPSYSPTSPSYSPTSP-SYSP 1589
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1549 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1608
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1609 SPTSPSYSPTSPSYSPTSP-SYSP 1631
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1531 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1590
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1591 SPSYSPTSPSYSPTSP-SYSP 1610
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1584 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1643
Query: 437 SPS-AGYSPTLPGYSPSSTGQYTP 369
SPS Y+PT P YSP+S Y+P
Sbjct: 1644 SPSRPNYTPTSPSYSPTSP-SYSP 1666
Score = 102 bits (255), Expect = 2e-20
Identities = 52/87 (59%), Positives = 65/87 (74%), Gaps = 5/87 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP Y
Sbjct: 1605 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1664
Query: 437 SPSA---GYSPTLPGYSPSSTG-QYTP 369
SP++ YSP+ P YSP+S +Y+P
Sbjct: 1665 SPTSPNYTYSPSSPSYSPTSPNPKYSP 1691
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1556 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1615
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1616 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1645
Score = 96.7 bits (239), Expect = 1e-18
Identities = 54/90 (60%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSP--TYSPSSPYSSGASP 444
S +YSP++ SP SP YSP+ PNY+PTSPSYSPTSPSYSP+SP TYSPSSP S SP
Sbjct: 1626 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSP 1685
Query: 443 D-----YSPSAGYSPTLPGYSPSSTGQYTP 369
+ SP+ YSPT P YSP+S Y+P
Sbjct: 1686 NPKYSPTSPNPTYSPTSPKYSPTSP-TYSP 1714
Score = 96.3 bits (238), Expect = 2e-18
Identities = 53/85 (62%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S AY P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1490 STSPAYEPR----SPGG-YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1544
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1545 YSPTSPSYSPTSPSYSPTSP-SYSP 1568
Score = 92.8 bits (229), Expect = 2e-17
Identities = 52/91 (57%), Positives = 61/91 (67%), Gaps = 18/91 (19%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSP--SYSPTSPSYSPSS-----------PTYSPSS 468
YSPS +P SP YSPTSP+YSPTSP +YSP+SPSYSP+S PTYSP+S
Sbjct: 1643 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPNPTYSPTS 1702
Query: 467 PYSSGASPDYSPS----AGYSPTLPGYSPSS 387
P S SP YSP+ + YSPT PGYSP+S
Sbjct: 1703 PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTS 1733
Score = 86.7 bits (213), Expect = 1e-15
Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 11/100 (11%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---YSPTSPNYSPTSPS--YSPTSPS--YSPSSPTYSPSSPYSS 456
S +YSP++ SP SP YSP+SP+YSPTSP+ YSPTSP+ YSP+SP YSP+SP S
Sbjct: 1654 SPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPNPTYSPTSPKYSPTSPTYS 1713
Query: 455 GASP---DYSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKD 348
SP YSP S GYSPT P YS +S +P + D+++
Sbjct: 1714 PTSPKGSTYSPTSPGYSPTSPTYSLTSPA-ISPDDSDEEN 1752
[56][TOP]
>UniRef100_UPI00005A0B24 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 15 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B24
Length = 1924
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1613 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1672
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1673 SPTSPSYSPTSPSYSPTSP-SYSP 1695
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1655 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1714
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1715 SPTSPSYSPTSPSYSPTSP-SYSP 1737
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1637 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1696
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1697 SPSYSPTSPSYSPTSP-SYSP 1716
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1690 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1749
Query: 437 SPS-AGYSPTLPGYSPSSTGQYTP 369
SPS Y+PT P YSP+S Y+P
Sbjct: 1750 SPSRPNYTPTSPSYSPTSP-SYSP 1772
Score = 105 bits (263), Expect = 2e-21
Identities = 58/108 (53%), Positives = 73/108 (67%), Gaps = 4/108 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+Y
Sbjct: 1725 SPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNY 1784
Query: 437 SP---SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
SP S Y+PT P YSPSS +YTP K T K + K +P
Sbjct: 1785 SPTPTSPKYTPTSPSYSPSSP-EYTP-TSPKYSPTSPKYSPTSPKYSP 1830
Score = 104 bits (260), Expect = 5e-21
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP Y
Sbjct: 1711 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1770
Query: 437 SP-SAGYSPTLPGYSPSSTG-QYTP 369
SP S Y+P P YSP+ T +YTP
Sbjct: 1771 SPTSPNYTPMSPNYSPTPTSPKYTP 1795
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1591 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1650
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1651 YSPTSPSYSPTSPSYSPTSP-SYSP 1674
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1807 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1866
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1867 SPTYSPTSPKYSPTSP-TYSP 1886
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1828 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1887
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1888 SPKGSTYSPTSPGYSPTS 1905
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1662 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1721
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1722 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1751
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1842 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1898
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1899 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1924
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/86 (59%), Positives = 62/86 (72%), Gaps = 4/86 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPT--SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S +YSP++ +P SP YSPT SP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP
Sbjct: 1767 SPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1826
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1827 KYSPTSPTYSPTTPKYSPTSP-TYSP 1851
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1814 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1873
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1874 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1903
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1563 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1622
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1623 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1667
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1867 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1917
Query: 443 DYS 435
D S
Sbjct: 1918 DDS 1920
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1547 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1604
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1605 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1632
[57][TOP]
>UniRef100_UPI00005A0B23 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 14 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B23
Length = 1653
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1476 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1535
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1536 SPTSPSYSPTSPSYSPTSP-SYSP 1558
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1518 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1577
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1578 SPTSPSYSPTSPSYSPTSP-SYSP 1600
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1500 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1559
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1560 SPSYSPTSPSYSPTSP-SYSP 1579
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1553 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1612
Query: 437 SPS-AGYSPTLPGYSPSSTGQYTP 369
SPS Y+PT P YSP+S Y+P
Sbjct: 1613 SPSRPNYTPTSPSYSPTSP-SYSP 1635
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1454 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1513
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1514 YSPTSPSYSPTSPSYSPTSP-SYSP 1537
Score = 101 bits (252), Expect = 4e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP Y
Sbjct: 1574 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1633
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S Y+P P YSP+S
Sbjct: 1634 SPTSPNYTPMSPNYSPTS 1651
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1525 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1584
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1585 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1614
Score = 94.0 bits (232), Expect = 9e-18
Identities = 54/91 (59%), Positives = 62/91 (68%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYS 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYS P+SP YSPS P
Sbjct: 1560 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNY 1619
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+ SP YSP S YSPT P Y+P S Y+P
Sbjct: 1620 TPTSPSYSPTSPSYSPTSPNYTPMSP-NYSP 1649
Score = 80.9 bits (198), Expect = 8e-14
Identities = 38/59 (64%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ SP SP YSP+ PNY+PTSPSYSPTSPSYSP+SP Y+P SP S SP+
Sbjct: 1595 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1653
[58][TOP]
>UniRef100_UPI00005A0B22 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 13 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B22
Length = 1722
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1476 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1535
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1536 SPTSPSYSPTSPSYSPTSP-SYSP 1558
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1518 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1577
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1578 SPTSPSYSPTSPSYSPTSP-SYSP 1600
Score = 108 bits (271), Expect = 3e-22
Identities = 57/90 (63%), Positives = 69/90 (76%), Gaps = 8/90 (8%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1553 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1612
Query: 437 SPSA-GYSPTLPGYSPSS------TGQYTP 369
SPS+ YSPT P YSP+S T +Y+P
Sbjct: 1613 SPSSPKYSPTSPKYSPTSPTYSPTTPKYSP 1642
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1500 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1559
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1560 SPSYSPTSPSYSPTSP-SYSP 1579
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1454 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1513
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1514 YSPTSPSYSPTSPSYSPTSP-SYSP 1537
Score = 103 bits (256), Expect = 1e-20
Identities = 53/84 (63%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSP+SP YSPTSP YSP+SPTYSP++P S SP Y
Sbjct: 1588 SPSYSPTSPSYSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTY 1647
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1648 SPTSPVYTPTSPKYSPTSP-TYSP 1670
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1626 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1685
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1686 SPKGSTYSPTSPGYSPTS 1703
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1525 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1584
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1585 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1614
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1640 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1696
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1697 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1722
Score = 93.2 bits (230), Expect = 2e-17
Identities = 53/91 (58%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSPS+ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1612 YSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1671
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1672 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1701
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1665 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1715
Query: 443 DYS 435
D S
Sbjct: 1716 DDS 1718
[59][TOP]
>UniRef100_UPI00005A0B21 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 12 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B21
Length = 1922
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1611 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1670
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1671 SPTSPSYSPTSPSYSPTSP-SYSP 1693
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1653 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1712
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1713 SPTSPSYSPTSPSYSPTSP-SYSP 1735
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSP-SYSP 1714
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1688 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1747
Query: 437 SPS-AGYSPTLPGYSPSSTGQYTP 369
SPS Y+PT P YSP+S Y+P
Sbjct: 1748 SPSRPNYTPTSPSYSPTSP-SYSP 1770
Score = 105 bits (263), Expect = 2e-21
Identities = 58/108 (53%), Positives = 73/108 (67%), Gaps = 4/108 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+Y
Sbjct: 1723 SPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNY 1782
Query: 437 SP---SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
SP S Y+PT P YSPSS +YTP K T K + K +P
Sbjct: 1783 SPTPTSPKYTPTSPSYSPSSP-EYTP-TSPKYSPTSPKYSPTSPKYSP 1828
Score = 104 bits (260), Expect = 5e-21
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP Y
Sbjct: 1709 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1768
Query: 437 SP-SAGYSPTLPGYSPSSTG-QYTP 369
SP S Y+P P YSP+ T +YTP
Sbjct: 1769 SPTSPNYTPMSPNYSPTPTSPKYTP 1793
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1589 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1648
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSP-SYSP 1672
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1805 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1864
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1865 SPTYSPTSPKYSPTSP-TYSP 1884
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1826 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1885
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1886 SPKGSTYSPTSPGYSPTS 1903
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1660 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1719
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1720 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1749
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1840 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1896
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1897 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1922
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/86 (59%), Positives = 62/86 (72%), Gaps = 4/86 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPT--SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S +YSP++ +P SP YSPT SP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP
Sbjct: 1765 SPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1824
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1825 KYSPTSPTYSPTTPKYSPTSP-TYSP 1849
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1812 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1871
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1872 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1901
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1561 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1620
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1621 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1665
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1865 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1915
Query: 443 DYS 435
D S
Sbjct: 1916 DDS 1918
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1545 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1602
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1603 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1630
[60][TOP]
>UniRef100_UPI00005A0B20 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 11 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B20
Length = 1923
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1671
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1672 SPTSPSYSPTSPSYSPTSP-SYSP 1694
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1713
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1714 SPTSPSYSPTSPSYSPTSP-SYSP 1736
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSP-SYSP 1715
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1748
Query: 437 SPS-AGYSPTLPGYSPSSTGQYTP 369
SPS Y+PT P YSP+S Y+P
Sbjct: 1749 SPSRPNYTPTSPSYSPTSP-SYSP 1771
Score = 105 bits (263), Expect = 2e-21
Identities = 58/108 (53%), Positives = 73/108 (67%), Gaps = 4/108 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+Y
Sbjct: 1724 SPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNY 1783
Query: 437 SP---SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
SP S Y+PT P YSPSS +YTP K T K + K +P
Sbjct: 1784 SPTPTSPKYTPTSPSYSPSSP-EYTP-TSPKYSPTSPKYSPTSPKYSP 1829
Score = 104 bits (260), Expect = 5e-21
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP Y
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1769
Query: 437 SP-SAGYSPTLPGYSPSSTG-QYTP 369
SP S Y+P P YSP+ T +YTP
Sbjct: 1770 SPTSPNYTPMSPNYSPTPTSPKYTP 1794
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSP-SYSP 1673
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1806 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1865
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1866 SPTYSPTSPKYSPTSP-TYSP 1885
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1827 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1886
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1887 SPKGSTYSPTSPGYSPTS 1904
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1661 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1720
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1721 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1750
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1841 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1897
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1898 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1923
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/86 (59%), Positives = 62/86 (72%), Gaps = 4/86 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPT--SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S +YSP++ +P SP YSPT SP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP
Sbjct: 1766 SPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1825
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1826 KYSPTSPTYSPTTPKYSPTSP-TYSP 1850
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1813 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1872
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1873 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1902
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1562 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1621
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1866 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1916
Query: 443 DYS 435
D S
Sbjct: 1917 DDS 1919
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1546 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1631
[61][TOP]
>UniRef100_UPI00005A0B1F PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 10 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1F
Length = 1840
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1545 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1604
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1605 SPTSPSYSPTSPSYSPTSP-SYSP 1627
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1587 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1646
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1647 SPTSPSYSPTSPSYSPTSP-SYSP 1669
Score = 108 bits (271), Expect = 3e-22
Identities = 57/91 (62%), Positives = 67/91 (73%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1622 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1681
Query: 437 SP--------SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S +YTP
Sbjct: 1682 SPSRPNYTPTSPSYSPTSPSYSPTSP-KYTP 1711
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1569 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1628
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1629 SPSYSPTSPSYSPTSP-SYSP 1648
Score = 105 bits (261), Expect = 4e-21
Identities = 54/87 (62%), Positives = 62/87 (71%), Gaps = 3/87 (3%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SP YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S S
Sbjct: 1521 SPGELYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTS 1580
Query: 446 PDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P YSP S YSPT P YSP+S Y+P
Sbjct: 1581 PSYSPTSPSYSPTSPSYSPTSP-SYSP 1606
Score = 103 bits (257), Expect = 1e-20
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSPS +P SP YSPTSP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP
Sbjct: 1681 YSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 1740
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP +T +Y+P
Sbjct: 1741 SPKYSPTSPTYSP-TTPKYSP 1760
Score = 102 bits (255), Expect = 2e-20
Identities = 51/84 (60%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP Y
Sbjct: 1657 SPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSY 1716
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ Y+PT P YSP+S +Y+P
Sbjct: 1717 SPSSPEYTPTSPKYSPTSP-KYSP 1739
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1723 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1782
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1783 SPTYSPTSPKYSPTSP-TYSP 1802
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1744 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1803
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1804 SPKGSTYSPTSPGYSPTS 1821
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1594 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1653
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1654 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1683
Score = 98.2 bits (243), Expect = 5e-19
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 1699 SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 1758
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 1759 SPTSPTYSPTSPVYTPTSP-KYSP 1781
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1758 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1814
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1815 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1840
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1730 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1789
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1790 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1819
Score = 69.7 bits (169), Expect = 2e-10
Identities = 46/98 (46%), Positives = 55/98 (56%), Gaps = 16/98 (16%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSP---------------SYSPSSPTY 480
S A+SP+ SP SP P+SP YSPTSP SYSP+SP+Y
Sbjct: 1499 SPAWSPTPG--SPGSP-GPSSPYIPSPGELYSPTSPAYEPRSPGGYTPQSPSYSPTSPSY 1555
Query: 479 SPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP+SP S SP+YSP S YSPT P YSP+S Y+P
Sbjct: 1556 SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP-SYSP 1592
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1783 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1833
Query: 443 DYS 435
D S
Sbjct: 1834 DDS 1836
[62][TOP]
>UniRef100_UPI00005A0B1E PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 9 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1E
Length = 1851
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1549 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1608
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1609 SPTSPSYSPTSPSYSPTSP-SYSP 1631
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1591 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1650
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1651 SPTSPSYSPTSPSYSPTSP-SYSP 1673
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1573 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1633 SPSYSPTSPSYSPTSP-SYSP 1652
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1626 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1685
Query: 437 SPS-AGYSPTLPGYSPSSTGQYTP 369
SPS Y+PT P YSP+S Y+P
Sbjct: 1686 SPSRPNYTPTSPSYSPTSP-SYSP 1708
Score = 106 bits (264), Expect = 2e-21
Identities = 60/113 (53%), Positives = 72/113 (63%), Gaps = 9/113 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP Y
Sbjct: 1647 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1706
Query: 437 SPSA--------GYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
SPS+ Y+PT P YSPSS +YTP K T K + K +P
Sbjct: 1707 SPSSPSYSPTSPKYTPTSPSYSPSSP-EYTP-TSPKYSPTSPKYSPTSPKYSP 1757
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1527 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1586
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1587 YSPTSPSYSPTSPSYSPTSP-SYSP 1610
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1734 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1793
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1794 SPTYSPTSPKYSPTSP-TYSP 1813
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1755 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1814
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1815 SPKGSTYSPTSPGYSPTS 1832
Score = 101 bits (251), Expect = 6e-20
Identities = 52/84 (61%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP+SP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP Y
Sbjct: 1696 SPSYSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKY 1755
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1756 SPTSPTYSPTTPKYSPTSP-TYSP 1778
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1598 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1657
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1658 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1687
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1769 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1825
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1826 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1851
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1741 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1800
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1801 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1830
Score = 89.0 bits (219), Expect = 3e-16
Identities = 51/88 (57%), Positives = 60/88 (68%), Gaps = 6/88 (6%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S +YSPS+ SP SP Y+PTSP+YSP+SP Y+PTSP YSP+SP YSP SP
Sbjct: 1703 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSP----T 1758
Query: 449 SPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
SP YSP+ YSPT P YSP+S YTP
Sbjct: 1759 SPTYSPTTPKYSPTSPTYSPTSP-VYTP 1785
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1499 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1558
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1559 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1603
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1794 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1844
Query: 443 DYS 435
D S
Sbjct: 1845 DDS 1847
[63][TOP]
>UniRef100_UPI00005A0B1D PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=2 Tax=Canis lupus familiaris
RepID=UPI00005A0B1D
Length = 1764
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1587 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1646
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1647 SPTSPSYSPTSPSYSPTSP-SYSP 1669
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1629 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1688
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1689 SPTSPSYSPTSPSYSPTSP-SYSP 1711
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1611 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1670
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1671 SPSYSPTSPSYSPTSP-SYSP 1690
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1664 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1723
Query: 437 SPS-AGYSPTLPGYSPSSTGQYTP 369
SPS Y+PT P YSP+S Y+P
Sbjct: 1724 SPSRPNYTPTSPSYSPTSP-SYSP 1746
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1565 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1624
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1625 YSPTSPSYSPTSPSYSPTSP-SYSP 1648
Score = 101 bits (252), Expect = 4e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP Y
Sbjct: 1685 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1744
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S Y+P P YSP+S
Sbjct: 1745 SPTSPNYTPMSPNYSPTS 1762
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1636 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1695
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1696 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1725
Score = 94.0 bits (232), Expect = 9e-18
Identities = 54/91 (59%), Positives = 62/91 (68%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYS 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYS P+SP YSPS P
Sbjct: 1671 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNY 1730
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+ SP YSP S YSPT P Y+P S Y+P
Sbjct: 1731 TPTSPSYSPTSPSYSPTSPNYTPMSP-NYSP 1760
Score = 80.9 bits (198), Expect = 8e-14
Identities = 38/59 (64%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ SP SP YSP+ PNY+PTSPSYSPTSPSYSP+SP Y+P SP S SP+
Sbjct: 1706 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1764
[64][TOP]
>UniRef100_UPI00005A0B1C PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 8 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1C
Length = 1719
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1542 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1601
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1602 SPTSPSYSPTSPSYSPTSP-SYSP 1624
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1584 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1643
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1644 SPTSPSYSPTSPSYSPTSP-SYSP 1666
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1626 SPSYSPTSPSYSPTSP-SYSP 1645
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1619 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1678
Query: 437 SPS-AGYSPTLPGYSPSSTGQYTP 369
SPS Y+PT P YSP+S Y+P
Sbjct: 1679 SPSRPNYTPTSPSYSPTSP-SYSP 1701
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1520 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1579
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSP-SYSP 1603
Score = 101 bits (252), Expect = 4e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP Y
Sbjct: 1640 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1699
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S Y+P P YSP+S
Sbjct: 1700 SPTSPNYTPMSPNYSPTS 1717
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1591 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1650
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1651 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1680
Score = 94.0 bits (232), Expect = 9e-18
Identities = 54/91 (59%), Positives = 62/91 (68%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYS 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYS P+SP YSPS P
Sbjct: 1626 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNY 1685
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+ SP YSP S YSPT P Y+P S Y+P
Sbjct: 1686 TPTSPSYSPTSPSYSPTSPNYTPMSP-NYSP 1715
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1492 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1551
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1552 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1596
Score = 80.9 bits (198), Expect = 8e-14
Identities = 38/59 (64%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ SP SP YSP+ PNY+PTSPSYSPTSPSYSP+SP Y+P SP S SP+
Sbjct: 1661 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1719
[65][TOP]
>UniRef100_UPI00005A0B1B PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 7 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1B
Length = 1858
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1542 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1601
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1602 SPTSPSYSPTSPSYSPTSP-SYSP 1624
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1584 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1643
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1644 SPTSPSYSPTSPSYSPTSP-SYSP 1666
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1566 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1626 SPSYSPTSPSYSPTSP-SYSP 1645
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1619 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1678
Query: 437 SPS-AGYSPTLPGYSPSSTGQYTP 369
SPS Y+PT P YSP+S Y+P
Sbjct: 1679 SPSRPNYTPTSPSYSPTSP-SYSP 1701
Score = 105 bits (261), Expect = 4e-21
Identities = 55/91 (60%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP Y
Sbjct: 1640 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1699
Query: 437 SP--------SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S +YTP
Sbjct: 1700 SPTSPNYTPMSPNYSPTSPSYSPTSP-KYTP 1729
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1520 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1579
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1580 YSPTSPSYSPTSPSYSPTSP-SYSP 1603
Score = 103 bits (256), Expect = 1e-20
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ +P SP YSPTSP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP Y
Sbjct: 1696 SPSYSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKY 1755
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP +T +Y+P
Sbjct: 1756 SPTSPKYSPTSPTYSP-TTPKYSP 1778
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1741 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1800
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1801 SPTYSPTSPKYSPTSP-TYSP 1820
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1762 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1821
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1822 SPKGSTYSPTSPGYSPTS 1839
Score = 100 bits (248), Expect = 1e-19
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSPS +P SP YSPTSP+YSPTSP+Y+P SP+YSP+SP+YSP+SP + SP YSPS
Sbjct: 1678 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSPSYSPS 1737
Query: 428 A-GYSPTLPGYSPSSTGQYTP 369
+ Y+PT P YSP+S +Y+P
Sbjct: 1738 SPEYTPTSPKYSPTSP-KYSP 1757
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1591 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1650
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1651 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1680
Score = 98.2 bits (243), Expect = 5e-19
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 1717 SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 1776
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 1777 SPTSPTYSPTSPVYTPTSP-KYSP 1799
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1776 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1832
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1833 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1858
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1748 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1807
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1808 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1837
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1492 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1551
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1552 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1596
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1801 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1851
Query: 443 DYS 435
D S
Sbjct: 1852 DDS 1854
[66][TOP]
>UniRef100_UPI00005A0B1A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 6 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1A
Length = 1767
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1590 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1649
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1650 SPTSPSYSPTSPSYSPTSP-SYSP 1672
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1632 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1691
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1692 SPTSPSYSPTSPSYSPTSP-SYSP 1714
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1614 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1673
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1674 SPSYSPTSPSYSPTSP-SYSP 1693
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1667 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1726
Query: 437 SPS-AGYSPTLPGYSPSSTGQYTP 369
SPS Y+PT P YSP+S Y+P
Sbjct: 1727 SPSRPNYTPTSPSYSPTSP-SYSP 1749
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1568 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1627
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1628 YSPTSPSYSPTSPSYSPTSP-SYSP 1651
Score = 101 bits (252), Expect = 4e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP Y
Sbjct: 1688 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1747
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S Y+P P YSP+S
Sbjct: 1748 SPTSPNYTPMSPNYSPTS 1765
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1639 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1698
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1699 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1728
Score = 94.0 bits (232), Expect = 9e-18
Identities = 54/91 (59%), Positives = 62/91 (68%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYS 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYS P+SP YSPS P
Sbjct: 1674 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNY 1733
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+ SP YSP S YSPT P Y+P S Y+P
Sbjct: 1734 TPTSPSYSPTSPSYSPTSPNYTPMSP-NYSP 1763
Score = 80.9 bits (198), Expect = 8e-14
Identities = 38/59 (64%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ SP SP YSP+ PNY+PTSPSYSPTSPSYSP+SP Y+P SP S SP+
Sbjct: 1709 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1767
Score = 71.2 bits (173), Expect = 6e-11
Identities = 49/103 (47%), Positives = 60/103 (58%), Gaps = 21/103 (20%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT---------SPNYSPTSPSYSPTSPS-YSPSSP---- 486
S A+SP S P+SPY P+ SP+YSPTSP+Y P SP Y+P SP
Sbjct: 1536 SPAWSPTPGSPGSPGPSSPYIPSPGELSCGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1595
Query: 485 ---TYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+YSP+SP S SP+YSP S YSPT P YSP+S Y+P
Sbjct: 1596 TSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP-SYSP 1637
[67][TOP]
>UniRef100_UPI00005A0B19 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 5 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B19
Length = 1693
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1516 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1575
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1576 SPTSPSYSPTSPSYSPTSP-SYSP 1598
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1558 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1617
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1618 SPTSPSYSPTSPSYSPTSP-SYSP 1640
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1540 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1599
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1600 SPSYSPTSPSYSPTSP-SYSP 1619
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1593 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1652
Query: 437 SPS-AGYSPTLPGYSPSSTGQYTP 369
SPS Y+PT P YSP+S Y+P
Sbjct: 1653 SPSRPNYTPTSPSYSPTSP-SYSP 1675
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1494 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1553
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1554 YSPTSPSYSPTSPSYSPTSP-SYSP 1577
Score = 101 bits (252), Expect = 4e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP Y
Sbjct: 1614 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1673
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S Y+P P YSP+S
Sbjct: 1674 SPTSPNYTPMSPNYSPTS 1691
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1565 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1624
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1625 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1654
Score = 94.0 bits (232), Expect = 9e-18
Identities = 54/91 (59%), Positives = 62/91 (68%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYS 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYS P+SP YSPS P
Sbjct: 1600 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNY 1659
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+ SP YSP S YSPT P Y+P S Y+P
Sbjct: 1660 TPTSPSYSPTSPSYSPTSPNYTPMSP-NYSP 1689
Score = 81.3 bits (199), Expect = 6e-14
Identities = 45/88 (51%), Positives = 54/88 (61%), Gaps = 16/88 (18%)
Frame = -1
Query: 584 LSPASPYSPTSPNYSPT---------------SPSYSPTSPSYSPSSPTYSPSSPYSSGA 450
++P + SP+YSPT SPSYSPTSPSYSP+SP+YSP+SP S
Sbjct: 1484 MTPGAAGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1543
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S YSPT P YSP+S Y+P
Sbjct: 1544 SPSYSPTSPSYSPTSPSYSPTSP-SYSP 1570
Score = 80.9 bits (198), Expect = 8e-14
Identities = 38/59 (64%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ SP SP YSP+ PNY+PTSPSYSPTSPSYSP+SP Y+P SP S SP+
Sbjct: 1635 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1693
[68][TOP]
>UniRef100_UPI00005A0B17 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B17
Length = 1788
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1611 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1670
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1671 SPTSPSYSPTSPSYSPTSP-SYSP 1693
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1653 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1712
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1713 SPTSPSYSPTSPSYSPTSP-SYSP 1735
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSP-SYSP 1714
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1688 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1747
Query: 437 SPS-AGYSPTLPGYSPSSTGQYTP 369
SPS Y+PT P YSP+S Y+P
Sbjct: 1748 SPSRPNYTPTSPSYSPTSP-SYSP 1770
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1589 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1648
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSP-SYSP 1672
Score = 101 bits (252), Expect = 4e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP Y
Sbjct: 1709 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1768
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S Y+P P YSP+S
Sbjct: 1769 SPTSPNYTPMSPNYSPTS 1786
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1660 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1719
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1720 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1749
Score = 94.0 bits (232), Expect = 9e-18
Identities = 54/91 (59%), Positives = 62/91 (68%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYS 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYS P+SP YSPS P
Sbjct: 1695 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNY 1754
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+ SP YSP S YSPT P Y+P S Y+P
Sbjct: 1755 TPTSPSYSPTSPSYSPTSPNYTPMSP-NYSP 1784
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1561 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1620
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1621 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1665
Score = 80.9 bits (198), Expect = 8e-14
Identities = 38/59 (64%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ SP SP YSP+ PNY+PTSPSYSPTSPSYSP+SP Y+P SP S SP+
Sbjct: 1730 SPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1788
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1545 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1602
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1603 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1630
[69][TOP]
>UniRef100_UPI00005A0B16 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B16
Length = 1922
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1611 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1670
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1671 SPTSPSYSPTSPSYSPTSP-SYSP 1693
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1653 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1712
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1713 SPTSPSYSPTSPSYSPTSP-SYSP 1735
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSP-SYSP 1714
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1688 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1747
Query: 437 SPS-AGYSPTLPGYSPSSTGQYTP 369
SPS Y+PT P YSP+S Y+P
Sbjct: 1748 SPSRPNYTPTSPSYSPTSP-SYSP 1770
Score = 105 bits (263), Expect = 2e-21
Identities = 58/108 (53%), Positives = 73/108 (67%), Gaps = 4/108 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+Y
Sbjct: 1723 SPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNY 1782
Query: 437 SP---SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
SP S Y+PT P YSPSS +YTP K T K + K +P
Sbjct: 1783 SPTPTSPKYTPTSPSYSPSSP-EYTP-TSPKYSPTSPKYSPTSPKYSP 1828
Score = 104 bits (260), Expect = 5e-21
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSPS P Y+P+SP S SP Y
Sbjct: 1709 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSY 1768
Query: 437 SP-SAGYSPTLPGYSPSSTG-QYTP 369
SP S Y+P P YSP+ T +YTP
Sbjct: 1769 SPTSPNYTPMSPNYSPTPTSPKYTP 1793
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1589 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1648
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSP-SYSP 1672
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1805 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1864
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1865 SPTYSPTSPKYSPTSP-TYSP 1884
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1826 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1885
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1886 SPKGSTYSPTSPGYSPTS 1903
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1660 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1719
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1720 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1749
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1840 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1896
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1897 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1922
Score = 94.7 bits (234), Expect = 5e-18
Identities = 51/86 (59%), Positives = 62/86 (72%), Gaps = 4/86 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPT--SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S +YSP++ +P SP YSPT SP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP
Sbjct: 1765 SPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1824
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1825 KYSPTSPTYSPTTPKYSPTSP-TYSP 1849
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1812 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1871
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1872 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1901
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1561 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1620
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1621 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1665
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1865 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1915
Query: 443 DYS 435
D S
Sbjct: 1916 DDS 1918
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1545 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1602
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1603 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1630
[70][TOP]
>UniRef100_UPI0001951285 220 kDa DNA-directed RNA polymerase polypeptide A n=1 Tax=Canis lupus
familiaris RepID=UPI0001951285
Length = 1969
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1671
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1672 SPTSPSYSPTSPSYSPTSP-SYSP 1694
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1713
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1714 SPTSPSYSPTSPSYSPTSP-SYSP 1736
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSP-SYSP 1715
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP+Y
Sbjct: 1689 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNY 1748
Query: 437 SPS-AGYSPTLPGYSPSSTGQYTP 369
SPS Y+PT P YSP+S Y+P
Sbjct: 1749 SPSRPNYTPTSPSYSPTSP-SYSP 1771
Score = 107 bits (267), Expect = 8e-22
Identities = 57/102 (55%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-S 429
Y+P + SP SP SPTSP+YSPTSPSYSP+SP Y+P SPTY+PSSP S +SP YSP S
Sbjct: 1776 YTPMSPNYSPTSPNSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTS 1835
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
Y+PT P YSPSS +YTP K T K + K +P
Sbjct: 1836 PKYTPTSPSYSPSSP-EYTP-TSPKYSPTSPKYSPTSPKYSP 1875
Score = 105 bits (261), Expect = 4e-21
Identities = 54/90 (60%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNYSP+ P+Y+PTSPSYSP+SP+YSP+SP + SP+Y
Sbjct: 1724 SPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNY 1783
Query: 437 SP-------SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS +YTP
Sbjct: 1784 SPTSPNSPTSPSYSPTSPSYSPSSP-RYTP 1812
Score = 103 bits (256), Expect = 1e-20
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP Y+P SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPS 1649
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSP-SYSP 1673
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 1852 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1911
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1912 SPTYSPTSPKYSPTSP-TYSP 1931
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 1873 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1932
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 1933 SPKGSTYSPTSPGYSPTS 1950
Score = 100 bits (250), Expect = 7e-20
Identities = 52/84 (61%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S Y+PS+ SP+SP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP Y
Sbjct: 1814 SPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKY 1873
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1874 SPTSPTYSPTTPKYSPTSP-TYSP 1896
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1661 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1720
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1721 SPTSPSYSPTSPSYSPTSPSYSPTSP-NYSP 1750
Score = 98.2 bits (243), Expect = 5e-19
Identities = 51/84 (60%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP+ P Y+PTSP+YSPTSPSYSPTSP+Y+P SP YSP+SP +S SP Y
Sbjct: 1738 SPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP-NSPTSPSY 1796
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSP+ P Y+P S YTP
Sbjct: 1797 SPTSPSYSPSSPRYTPQSP-TYTP 1819
Score = 97.4 bits (241), Expect = 8e-19
Identities = 53/94 (56%), Positives = 64/94 (68%), Gaps = 15/94 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSY-------------SPTSPSYSPSSPTYSPSS 468
YSPS +P SP YSPTSP+YSPTSP+Y SPTSPSYSP+SP+YSPSS
Sbjct: 1748 YSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPNSPTSPSYSPTSPSYSPSS 1807
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
P + SP Y+PS+ YSP+ P YSP+S +YTP
Sbjct: 1808 PRYTPQSPTYTPSSPSYSPSSPSYSPTSP-KYTP 1840
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1887 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 1943
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
GYSPT P YS +S +P + D+++
Sbjct: 1944 PGYSPTSPTYSLTSPA-ISPDDSDEEN 1969
Score = 94.0 bits (232), Expect = 9e-18
Identities = 54/91 (59%), Positives = 62/91 (68%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYS 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYS P+SP YSPS P
Sbjct: 1696 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSRPNY 1755
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+ SP YSP S YSPT P Y+P S Y+P
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPMSP-NYSP 1785
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 1859 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1918
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 1919 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 1948
Score = 89.0 bits (219), Expect = 3e-16
Identities = 51/88 (57%), Positives = 60/88 (68%), Gaps = 6/88 (6%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S +YSPS+ SP SP Y+PTSP+YSP+SP Y+PTSP YSP+SP YSP SP
Sbjct: 1821 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSP----T 1876
Query: 449 SPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
SP YSP+ YSPT P YSP+S YTP
Sbjct: 1877 SPTYSPTTPKYSPTSPTYSPTSP-VYTP 1903
Score = 86.3 bits (212), Expect = 2e-15
Identities = 54/106 (50%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPT---------------SPSYSPTSPS 504
S A+SP S P+SPY P+ SP+YSPT SPSYSPTSPS
Sbjct: 1562 SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS 1621
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1622 YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 1912 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 1962
Query: 443 DYS 435
D S
Sbjct: 1963 DDS 1965
Score = 54.3 bits (129), Expect = 8e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPTSPSYSPTSPS--YSPS-----SPTYSPSSPYSSGA 450
+SPS A S AS +SP SP +SPT S PS Y PS SP+YSP+SP
Sbjct: 1546 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPR 1603
Query: 449 SP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YSPT P YSP+S Y+P
Sbjct: 1604 SPGGYTPQSPSYSPTSPSYSPTSP-SYSP 1631
[71][TOP]
>UniRef100_B7G9I2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G9I2_PHATR
Length = 1706
Score = 111 bits (277), Expect = 6e-23
Identities = 60/93 (64%), Positives = 69/93 (74%), Gaps = 3/93 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1612 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1671
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTPHEG-DKKDK 345
SP S YSPT P YSP+S Y+P G DKKD+
Sbjct: 1672 SPTSPAYSPTSPAYSPTSPA-YSPSGGDDKKDE 1703
Score = 105 bits (263), Expect = 2e-21
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1528 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1587
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1588 SPTSPAYSPTSPAYSPTSPA-YSP 1610
Score = 105 bits (263), Expect = 2e-21
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1549 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1608
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1609 SPTSPAYSPTSPAYSPTSPA-YSP 1631
Score = 105 bits (263), Expect = 2e-21
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1570 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1629
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1630 SPTSPAYSPTSPAYSPTSPA-YSP 1652
Score = 105 bits (263), Expect = 2e-21
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1591 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1650
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1651 SPTSPAYSPTSPAYSPTSPA-YSP 1673
Score = 97.4 bits (241), Expect = 8e-19
Identities = 50/73 (68%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Frame = -1
Query: 581 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 408
SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT
Sbjct: 1518 SPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1577
Query: 407 PGYSPSSTGQYTP 369
P YSP+S Y+P
Sbjct: 1578 PAYSPTSPA-YSP 1589
Score = 95.1 bits (235), Expect = 4e-18
Identities = 49/72 (68%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Frame = -1
Query: 581 SPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 405
SPA YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P
Sbjct: 1514 SPA--YSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1571
Query: 404 GYSPSSTGQYTP 369
YSP+S Y+P
Sbjct: 1572 AYSPTSPA-YSP 1582
Score = 75.1 bits (183), Expect = 4e-12
Identities = 45/92 (48%), Positives = 51/92 (55%), Gaps = 18/92 (19%)
Frame = -1
Query: 590 ARLSPASPYSPTSPNYSP-----------------TSPSYSPTSPSYSPSSPTYSPSSPY 462
A SPA + SP YSP SP+YSPTSP YSP+SP YSP+SP
Sbjct: 1478 AAFSPAVGAASFSPAYSPDSGSYGSGFASGSYGAGDSPAYSPTSPQYSPTSPAYSPTSPA 1537
Query: 461 SSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1538 YSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1568
[72][TOP]
>UniRef100_Q5ACI7 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q5ACI7_CANAL
Length = 1728
Score = 111 bits (277), Expect = 6e-23
Identities = 61/92 (66%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP Y
Sbjct: 1638 SPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQY 1697
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDK 345
SP S YSPT P YSP S G Y P E KKD+
Sbjct: 1698 SPTSPQYSPTSPQYSPGSPG-YEP-EPPKKDE 1727
Score = 109 bits (272), Expect = 2e-22
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1589 SPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSY 1648
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1649 SPTSPSYSPTSPQYSPTSP-SYSP 1671
Score = 108 bits (271), Expect = 3e-22
Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1613 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPT 1672
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S QY+P
Sbjct: 1673 SPQYSPTSPSYSPTSP-QYSP 1692
Score = 106 bits (264), Expect = 2e-21
Identities = 53/84 (63%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ +P SP YSPTSP+Y+PTSP+YSPTSP+YSP+SP+YSP+SP S SP Y
Sbjct: 1561 SPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSY 1620
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1621 SPTSPSYSPTSPSYSPTSPA-YSP 1643
Score = 99.4 bits (246), Expect = 2e-19
Identities = 52/85 (61%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP YSP+ SP+ YSPTSP+Y+PTSP+YSPTSPSY+P+SP YSP+SP + SP
Sbjct: 1538 SPGYGYSPT----SPS--YSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPA 1591
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S QY+P
Sbjct: 1592 YSPTSPAYSPTSPSYSPTSP-QYSP 1615
Score = 81.6 bits (200), Expect = 5e-14
Identities = 43/76 (56%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = -1
Query: 593 NARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYS 417
N+ SP Y+ YSPTSPSYSPTSPSY+P+SP YSP+SP + SP YSP S Y+
Sbjct: 1529 NSITSPG--YTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYA 1586
Query: 416 PTLPGYSPSSTGQYTP 369
PT P YSP+S Y+P
Sbjct: 1587 PTSPAYSPTSPA-YSP 1601
Score = 62.8 bits (151), Expect = 2e-08
Identities = 38/74 (51%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Frame = -1
Query: 578 PASPY--SPTSPNY-SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPT 411
P SP SP S Y S TSP Y+ YSP+SP+YSP+SP + SP YSP S Y+PT
Sbjct: 1515 PTSPAATSPFSYGYNSITSPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPT 1574
Query: 410 LPGYSPSSTGQYTP 369
P YSP+S Y P
Sbjct: 1575 SPAYSPTSP-SYAP 1587
[73][TOP]
>UniRef100_C4YN85 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=C4YN85_CANAL
Length = 1742
Score = 111 bits (277), Expect = 6e-23
Identities = 61/92 (66%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP Y
Sbjct: 1652 SPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQY 1711
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDK 345
SP S YSPT P YSP S G Y P E KKD+
Sbjct: 1712 SPTSPQYSPTSPQYSPGSPG-YEP-EPPKKDE 1741
Score = 109 bits (272), Expect = 2e-22
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1603 SPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSY 1662
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1663 SPTSPSYSPTSPQYSPTSP-SYSP 1685
Score = 108 bits (271), Expect = 3e-22
Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1627 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPT 1686
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S QY+P
Sbjct: 1687 SPQYSPTSPSYSPTSP-QYSP 1706
Score = 106 bits (264), Expect = 2e-21
Identities = 53/84 (63%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ +P SP YSPTSP+Y+PTSP+YSPTSP+YSP+SP+YSP+SP S SP Y
Sbjct: 1575 SPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSY 1634
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1635 SPTSPSYSPTSPSYSPTSPA-YSP 1657
Score = 100 bits (250), Expect = 7e-20
Identities = 51/84 (60%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +Y+P++ SP SP Y+PTSP YSPTSPSY+PTSP+YSP+SP+Y+P+SP S SP Y
Sbjct: 1554 SPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPAY 1613
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1614 SPTSPSYSPTSPQYSPTSP-SYSP 1636
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/85 (58%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP YSP+ SP+ YSPTSP+Y+PTSP+YSPTSPSY+P+SP YSP+SP + SP
Sbjct: 1538 SPGYGYSPT----SPS--YSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPA 1591
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S Y+PT P YSP+S Y+P
Sbjct: 1592 YSPTSPSYAPTSPAYSPTSPA-YSP 1615
Score = 81.3 bits (199), Expect = 6e-14
Identities = 43/76 (56%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Frame = -1
Query: 593 NARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYS 417
N+ SP Y+ YSPTSPSYSPTSPSY+P+SP YSP+SP + SP YSP S Y+
Sbjct: 1529 NSITSPG--YTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYA 1586
Query: 416 PTLPGYSPSSTGQYTP 369
PT P YSP+S Y P
Sbjct: 1587 PTSPAYSPTSP-SYAP 1601
Score = 62.8 bits (151), Expect = 2e-08
Identities = 38/74 (51%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Frame = -1
Query: 578 PASPY--SPTSPNY-SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPT 411
P SP SP S Y S TSP Y+ YSP+SP+YSP+SP + SP YSP S Y+PT
Sbjct: 1515 PTSPAATSPFSYGYNSITSPGYTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPT 1574
Query: 410 LPGYSPSSTGQYTP 369
P YSP+S Y P
Sbjct: 1575 SPAYSPTSP-SYAP 1587
[74][TOP]
>UniRef100_C4Y5N3 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y5N3_CLAL4
Length = 281
Score = 111 bits (277), Expect = 6e-23
Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 171 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 230
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S QY+P
Sbjct: 231 SPTSPSYSPTSPSYSPTSP-QYSP 253
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 87 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 146
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 147 SPTSPSYSPTSPSYSPTSP-SYSP 169
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 108 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 167
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 168 SPTSPSYSPTSPSYSPTSP-SYSP 190
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 129 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 188
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 189 SPTSPSYSPTSPSYSPTSP-SYSP 211
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 150 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 209
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 210 SPTSPSYSPTSPSYSPTSP-SYSP 232
Score = 109 bits (272), Expect = 2e-22
Identities = 59/95 (62%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 192 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQY 251
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGK 336
SP S YSP P YSP S P GDKK+ K
Sbjct: 252 SPTSPQYSPGSPSYSPRS-----PSYGDKKEDEKK 281
Score = 100 bits (249), Expect = 1e-19
Identities = 53/81 (65%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Frame = -1
Query: 608 AYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
A SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 71 ATSPGYGGTSPT--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 128
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 129 SPSYSPTSPSYSPTSP-SYSP 148
Score = 77.4 bits (189), Expect = 9e-13
Identities = 48/98 (48%), Positives = 57/98 (58%), Gaps = 18/98 (18%)
Frame = -1
Query: 608 AYSPSNARLSPASPYS----------PTSPNYSPTSPSYSPTSPSYSPSSP-------TY 480
+Y + SP SP+S TSP Y TSP+YSPTSPSYSP+SP +Y
Sbjct: 45 SYGGQPSMTSPTSPFSYGGASPAFGGATSPGYGGTSPTYSPTSPSYSPTSPSYSPTSPSY 104
Query: 479 SPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 105 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 141
[75][TOP]
>UniRef100_A1YIA7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pichia kudriavzevii
RepID=A1YIA7_ISSOR
Length = 1647
Score = 111 bits (277), Expect = 6e-23
Identities = 58/84 (69%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1516 SPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQY 1575
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S QY+P
Sbjct: 1576 SPTSPQYSPTSPQYSPTSP-QYSP 1598
Score = 109 bits (272), Expect = 2e-22
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1495 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1554
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S QY+P
Sbjct: 1555 SPTSPSYSPTSPQYSPTSP-QYSP 1577
Score = 106 bits (265), Expect = 1e-21
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP Y
Sbjct: 1558 SPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQY 1617
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S QY+P
Sbjct: 1618 SPTSPQYSPTSPQYSPTSP-QYSP 1640
Score = 106 bits (264), Expect = 2e-21
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP S SP Y
Sbjct: 1537 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQY 1596
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S QY+P
Sbjct: 1597 SPTSPQYSPTSPQYSPTSP-QYSP 1619
Score = 105 bits (262), Expect = 3e-21
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1474 SPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSY 1533
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1534 SPTSPSYSPTSPSYSPTSP-SYSP 1556
Score = 103 bits (258), Expect = 9e-21
Identities = 53/81 (65%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP
Sbjct: 1568 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1627
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1628 SPQYSPTSPQYSPTSP-SYSP 1647
Score = 97.4 bits (241), Expect = 8e-19
Identities = 49/81 (60%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y ++ P SP Y PTSP+YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP
Sbjct: 1456 YGATSPSYGPTSPSYGPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1515
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1516 SPAYSPTSPAYSPTSP-SYSP 1535
[76][TOP]
>UniRef100_A7NVN7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7NVN7_VITVI
Length = 1010
Score = 110 bits (276), Expect = 7e-23
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 833 SPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSY 892
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 893 SPTSPAYSPTSPAYSPTSP-SYSP 915
Score = 109 bits (273), Expect = 2e-22
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 896 SPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGY 955
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y P
Sbjct: 956 SPTSPSYSPTSPSYSPTSP-SYNP 978
Score = 108 bits (269), Expect = 5e-22
Identities = 57/84 (67%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSPS+ SP+SP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP Y
Sbjct: 777 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 836
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 837 SPTSPSYSPTSPSYSPTSP-SYSP 859
Score = 107 bits (266), Expect = 1e-21
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP+SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 812 SPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 871
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 872 SPTSPSYSPTSPVYSPTSP-SYSP 894
Score = 107 bits (266), Expect = 1e-21
Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSP+YSPTSP+YSP+SP+YSP+SP S SP Y
Sbjct: 868 SPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 927
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 928 SPTSPSYSPTSPSYSPTSPA-YSP 950
Score = 102 bits (254), Expect = 3e-20
Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP + +S Y
Sbjct: 924 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKY 983
Query: 437 SPSAGYSPTLPGYSPSSTGQYTP 369
SPS YSP+ P SPSS Y+P
Sbjct: 984 SPSLAYSPSSPRLSPSS--PYSP 1004
Score = 98.2 bits (243), Expect = 5e-19
Identities = 57/91 (62%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP SP S
Sbjct: 840 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPSYSPTSPAY 899
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 900 SPTSPAYSPTSPSYSPTSPSYSPTSP-SYSP 929
Score = 96.7 bits (239), Expect = 1e-18
Identities = 57/91 (62%), Positives = 61/91 (67%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S YSPS+ SP SP YSPTSP YSPTSP YSPTSP+YSPSSP YSP SP S
Sbjct: 784 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 843
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 844 SPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 873
Score = 95.5 bits (236), Expect = 3e-18
Identities = 49/73 (67%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSY+PSS YSPS YS +SP
Sbjct: 938 SPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPSLAYSP-SSPRL 996
Query: 437 SPSAGYSPTLPGY 399
SPS+ YSPT P Y
Sbjct: 997 SPSSPYSPTSPNY 1009
Score = 89.0 bits (219), Expect = 3e-16
Identities = 55/97 (56%), Positives = 63/97 (64%), Gaps = 13/97 (13%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPA-----SPY------SPTS-PNYSPTSPSYSPTSPSYSPSSPTYS 477
SP+ SP N RLSP SPY SPTS P YSP+SP YSP+SP YSP+SP YS
Sbjct: 744 SPNYLLSP-NLRLSPITDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 802
Query: 476 PSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P+SP S SP YSP S YSP+ PGYSP+S Y+P
Sbjct: 803 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 838
[77][TOP]
>UniRef100_B7PJA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
RepID=B7PJA3_IXOSC
Length = 1937
Score = 110 bits (276), Expect = 7e-23
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1611 SPTYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1670
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1671 SPTSPSYSPTSPSYSPTSP-SYSP 1693
Score = 110 bits (276), Expect = 7e-23
Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSPSSP + ASP Y
Sbjct: 1674 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSY 1733
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1734 SPTSPSYSPTSPSYSPTSP-SYSP 1756
Score = 110 bits (275), Expect = 9e-23
Identities = 60/97 (61%), Positives = 67/97 (69%), Gaps = 15/97 (15%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ +PASP YSPTSP+YSPTSPSYSPTSPSYSPSSP YSP SP
Sbjct: 1716 SPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSY 1775
Query: 458 SGASPDYSPSA-GYSPTLPGYSPSS------TGQYTP 369
S SP YSPS+ YSPT P YSP+S + QYTP
Sbjct: 1776 SPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTP 1812
Score = 109 bits (272), Expect = 2e-22
Identities = 56/87 (64%), Positives = 64/87 (73%), Gaps = 5/87 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S Y+PS+ + SP SP YSPTSP YSPTSP YSPTSP YSP+SPTYSP+SP S SP Y
Sbjct: 1849 SPTYTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTY 1908
Query: 437 SPS----AGYSPTLPGYSPSSTGQYTP 369
SP+ + YSPT PGYSPSS Y+P
Sbjct: 1909 SPTSPKGSSYSPTSPGYSPSSP-TYSP 1934
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1635 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1694
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1695 SPSYSPTSPSYSPTSP-SYSP 1714
Score = 106 bits (265), Expect = 1e-21
Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1653 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1712
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSP+ P Y+P+S Y+P
Sbjct: 1713 SPTSPSYSPSSPNYTPASP-SYSP 1735
Score = 105 bits (262), Expect = 3e-21
Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+PS+ + SP SP YSPTSP+YSP+SP YSPTSP YSP+SPTY+PSSP S SP YSP
Sbjct: 1810 YTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPT 1869
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S +Y+P
Sbjct: 1870 SPQYSPTSPKYSPTSP-KYSP 1889
Score = 102 bits (255), Expect = 2e-20
Identities = 53/81 (65%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP + SP SP YSP+SP YSPTSPSYSPTSPSYSP SP Y+PSSP S SP YSP
Sbjct: 1768 YSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPT 1827
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSP+ P YSP+S +Y+P
Sbjct: 1828 SPSYSPSSPKYSPTSP-KYSP 1847
Score = 102 bits (254), Expect = 3e-20
Identities = 53/84 (63%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ + SP SP YSPTSP Y+P+SP YSPTSP YSP+SP YSP+SP S SP Y
Sbjct: 1828 SPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSPKY 1887
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1888 SPTSPTYSPTSPKYSPTSP-TYSP 1910
Score = 102 bits (253), Expect = 3e-20
Identities = 56/102 (54%), Positives = 68/102 (66%), Gaps = 18/102 (17%)
Frame = -1
Query: 620 SPSIAY----------------SPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPS 492
SP+ Y +PS+ ++PASP YSPTSP+YSPTSPSYSPTSP+YSP+
Sbjct: 1579 SPASPYIPSPVSPNYSPSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPTSPNYSPT 1638
Query: 491 SPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1639 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1679
Score = 101 bits (252), Expect = 4e-20
Identities = 51/84 (60%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSP+SP+Y+P SPSYSP+SP+YSP+SP S SP Y
Sbjct: 1695 SPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSPSY 1754
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSP+ P YSP S Y+P
Sbjct: 1755 SPTSPSYSPSSPNYSPQSP-SYSP 1777
Score = 99.8 bits (247), Expect = 2e-19
Identities = 49/74 (66%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ + SP SP YSPTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 1866 YSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSP---TS 1922
Query: 428 AGYSPTLPGYSPSS 387
GYSP+ P YSP+S
Sbjct: 1923 PGYSPSSPTYSPTS 1936
Score = 99.0 bits (245), Expect = 3e-19
Identities = 51/87 (58%), Positives = 62/87 (71%), Gaps = 3/87 (3%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPY--SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SP + P + SPASPY SP SPNYSP+SP+Y+P+SPS +P+SPTYSP+SP S S
Sbjct: 1566 SPGWSPQPGSPASSPASPYIPSPVSPNYSPSSPAYAPSSPSMTPASPTYSPTSPSYSPTS 1625
Query: 446 PDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P YSP S YSPT P YSP+S Y+P
Sbjct: 1626 PSYSPTSPNYSPTSPSYSPTSP-SYSP 1651
Score = 99.0 bits (245), Expect = 3e-19
Identities = 52/91 (57%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ + SP SP YSP SP Y+P+SP YSPTSP+YSP+SP+YSPSSP
Sbjct: 1779 SPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKY 1838
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S Y+P+ P YSP+S QY+P
Sbjct: 1839 SPTSPKYSPTSPTYTPSSPKYSPTSP-QYSP 1868
Score = 89.7 bits (221), Expect = 2e-16
Identities = 54/98 (55%), Positives = 63/98 (64%), Gaps = 16/98 (16%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSP+SP+YSP SPSYSP SP+YSP SP S
Sbjct: 1737 SPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSY 1796
Query: 458 SGASPDYSP--------SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1797 SPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSP-SYSP 1833
Score = 79.0 bits (193), Expect = 3e-13
Identities = 40/58 (68%), Positives = 45/58 (77%), Gaps = 4/58 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSP---SYSPSSPTYSPSSPYSSGASP 444
YSP++ + SP SP YSPTSP YSPTSP+YSPTSP SYSP+SP YSPSSP S SP
Sbjct: 1880 YSPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSPGYSPSSPTYSPTSP 1937
Score = 68.2 bits (165), Expect = 5e-10
Identities = 46/97 (47%), Positives = 53/97 (54%), Gaps = 18/97 (18%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPSYS-----------------PTSPSYSPSSPTYS 477
+SPS A S AS YSP S SP +S P SP+YSPSSP Y+
Sbjct: 1547 FSPSAA--SDASGYSPASAGLSP---GWSPQPGSPASSPASPYIPSPVSPNYSPSSPAYA 1601
Query: 476 PSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
PSSP + ASP YSP S YSPT P YSP+S Y+P
Sbjct: 1602 PSSPSMTPASPTYSPTSPSYSPTSPSYSPTSP-NYSP 1637
[78][TOP]
>UniRef100_A7S8F9 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7S8F9_NEMVE
Length = 1929
Score = 110 bits (276), Expect = 7e-23
Identities = 58/93 (62%), Positives = 66/93 (70%), Gaps = 9/93 (9%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SPS YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1624 SPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 464 YSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1684 SYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1715
Score = 110 bits (276), Expect = 7e-23
Identities = 60/86 (69%), Positives = 67/86 (77%), Gaps = 2/86 (2%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
SPS A SPS+ + SPASP YSPTSP YSPTSP+YSP SPSYSPSSP YSP+SP + ASP
Sbjct: 1780 SPSYA-SPSSPKYSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPKYSPTSPSYTPASP 1838
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSP+ P YSPSS +YTP
Sbjct: 1839 SYSPASPSYSPSSPSYSPSSP-RYTP 1863
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1713
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1714 SPTSPSYSPTSPSYSPTSP-SYSP 1736
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1675 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1734
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1735 SPTSPSYSPTSPSYSPTSP-SYSP 1757
Score = 108 bits (269), Expect = 5e-22
Identities = 53/84 (63%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S +SP Y
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSY 1769
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSP P Y+ S+ +Y+P
Sbjct: 1770 SPSSPSYSPQSPSYASPSSPKYSP 1793
Score = 106 bits (265), Expect = 1e-21
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 4/86 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S +YSP++ SP+SP YSP SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP
Sbjct: 1610 SPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1669
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1670 SYSPTSPSYSPTSPSYSPTSP-SYSP 1694
Score = 105 bits (262), Expect = 3e-21
Identities = 59/99 (59%), Positives = 68/99 (68%), Gaps = 17/99 (17%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP--------Y 462
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSPSSP+YSPSSP Y
Sbjct: 1724 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSY 1783
Query: 461 SSGASPDYSP--------SAGYSPTLPGYSPSSTGQYTP 369
+S +SP YSP S YSPT P YSP+S Y+P
Sbjct: 1784 ASPSSPKYSPASPSYSPTSPKYSPTSPNYSPASP-SYSP 1821
Score = 105 bits (262), Expect = 3e-21
Identities = 54/84 (64%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP+SP YSPTSP+Y+P SPSYSP SPSYSPSSP+YSPSSP + SP YSP
Sbjct: 1812 YSPASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPT 1871
Query: 431 SAGYSPTLPGYSPSSTGQYTPHEG 360
S YSP P YSP +T YTP G
Sbjct: 1872 SPKYSPASPNYSP-TTPSYTPMSG 1894
Score = 102 bits (253), Expect = 3e-20
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPS--YSPTSPSYSPSSPTYSPSSPYSSGASP 444
S A+ PS+ +SPASP YSPTSP YSP+SPS YSP SPSYSP+SP+YSP+SP S SP
Sbjct: 1596 SPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSP 1655
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1656 SYSPTSPSYSPTSPSYSPTSP-SYSP 1680
Score = 101 bits (252), Expect = 4e-20
Identities = 54/92 (58%), Positives = 62/92 (67%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
S +YSPS+ SP SP YSP SP+YSPTSP YSPTSP+YSP+SP+YSPSSP
Sbjct: 1766 SPSYSPSSPSYSPQSPSYASPSSPKYSPASPSYSPTSPKYSPTSPNYSPASPSYSPSSPK 1825
Query: 461 SSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP Y+P S YSP P YSPSS Y+P
Sbjct: 1826 YSPTSPSYTPASPSYSPASPSYSPSSP-SYSP 1856
Score = 100 bits (249), Expect = 1e-19
Identities = 58/91 (63%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1682 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1741
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSPSS Y+P
Sbjct: 1742 SPTSPSYSPTSPSYSPTSPSYSPSSP-SYSP 1771
Score = 98.6 bits (244), Expect = 4e-19
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNY-SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSPS+ SP+SP YSP SP+Y SP+SP YSP SPSYSP+SP YSP+SP S ASP
Sbjct: 1759 SPSYSPSSPSYSPSSPSYSPQSPSYASPSSPKYSPASPSYSPTSPKYSPTSPNYSPASPS 1818
Query: 440 YSPSA-GYSPTLPGYSPSSTGQYTP 369
YSPS+ YSPT P Y+P+S Y+P
Sbjct: 1819 YSPSSPKYSPTSPSYTPASP-SYSP 1842
Score = 95.9 bits (237), Expect = 2e-18
Identities = 58/93 (62%), Positives = 66/93 (70%), Gaps = 11/93 (11%)
Frame = -1
Query: 614 SIAYSPSN--ARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSP 465
S YSPS+ + SPASP YSPTSP+YSPTSPSYSPTSPSYSP+SP +YSP+SP
Sbjct: 1617 SPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1676
Query: 464 YSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1677 SYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1708
Score = 91.7 bits (226), Expect = 5e-17
Identities = 52/86 (60%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
Frame = -1
Query: 617 PSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS--SGASP 444
P+ Y PS A SP YSP+SP + P+SPS SP SPSYSP+SP YSPSSP S S ASP
Sbjct: 1577 PTSPYIPSPAAASPG--YSPSSPAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASP 1634
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1635 SYSPTSPSYSPTSPSYSPTSP-SYSP 1659
Score = 85.1 bits (209), Expect = 4e-15
Identities = 38/66 (57%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +Y+P++ SPASP YSP+SP+YSP+SP Y+PTSP YSP+SP YSP+SP S +P Y
Sbjct: 1830 SPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSPTTPSY 1889
Query: 437 SPSAGY 420
+P +G+
Sbjct: 1890 TPMSGH 1895
Score = 76.6 bits (187), Expect = 2e-12
Identities = 46/88 (52%), Positives = 57/88 (64%), Gaps = 9/88 (10%)
Frame = -1
Query: 605 YSPSNARLSPASPYSP--TSPNYSPT----SPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
+SPS +P SP SP TSP Y P+ SP YSP+SP++ PSSP+ SP+SP S SP
Sbjct: 1560 FSPSWMSPTPGSPVSPGPTSP-YIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYSPTSP 1618
Query: 443 DY---SPSAGYSPTLPGYSPSSTGQYTP 369
Y SPS+GYSP P YSP+S Y+P
Sbjct: 1619 GYSPSSPSSGYSPASPSYSPTSP-SYSP 1645
[79][TOP]
>UniRef100_UPI0000E48672 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48672
Length = 1913
Score = 110 bits (275), Expect = 9e-23
Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SPASP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1607 SPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1666
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1667 SPTSPSYSPTSPSYSPTSP-SYSP 1689
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1628 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1687
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1688 SPTSPSYSPTSPSYSPTSP-SYSP 1710
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1649 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1708
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1709 SPTSPSYSPTSPSYSPTSP-SYSP 1731
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1670 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1729
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1730 SPTSPSYSPTSPSYSPTSP-SYSP 1752
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1691 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1750
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSP+S Y+P
Sbjct: 1751 SPSSPKYSPTSPSYSPTSP-SYSP 1773
Score = 108 bits (270), Expect = 4e-22
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSPSSP YSP+SP S SP Y
Sbjct: 1712 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSY 1771
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSP P YSPSS +Y+P
Sbjct: 1772 SPQSPSYSPGSPSYSPSSP-KYSP 1794
Score = 108 bits (270), Expect = 4e-22
Identities = 56/84 (66%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP + SP+SP YSPTSP+YSPTSPSYSPTSP++SPSSPTYSP+SP S SP Y
Sbjct: 1775 SPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKY 1834
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSP+S +Y+P
Sbjct: 1835 SPSSPKYSPTSPTYSPTSP-KYSP 1857
Score = 107 bits (267), Expect = 8e-22
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP+SP YSPTSP+YSPTSPSYSP SPSYSP SP+YSPSSP S SP Y
Sbjct: 1740 SPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSY 1799
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P +SPSS Y+P
Sbjct: 1800 SPTSPSYSPTSPNFSPSSP-TYSP 1822
Score = 104 bits (259), Expect = 7e-21
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S +YSP++ PASP +P SP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YS
Sbjct: 1580 SPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYS 1639
Query: 434 P-SAGYSPTLPGYSPSSTGQYTP 369
P S YSPT P YSP+S Y+P
Sbjct: 1640 PTSPSYSPTSPSYSPTSP-SYSP 1661
Score = 103 bits (257), Expect = 1e-20
Identities = 53/87 (60%), Positives = 64/87 (73%), Gaps = 5/87 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSP+SP YSPTSP+YSPTSP YSP+SPTYSP+SP S +SP Y
Sbjct: 1817 SPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTY 1876
Query: 437 SPS----AGYSPTLPGYSPSSTGQYTP 369
SP+ + YSPT P YSP+S Y+P
Sbjct: 1877 SPTSPKGSTYSPTSPSYSPTSP-SYSP 1902
Score = 102 bits (253), Expect = 3e-20
Identities = 53/76 (69%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSPS+ + SP SP YSPTSP YSP SP+YSPTSP YSPSSPTYSP+SP S SP SPS
Sbjct: 1834 YSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPT-SPS 1892
Query: 428 AGYSPTLPGYSPSSTG 381
YSPT P YSP+S G
Sbjct: 1893 --YSPTSPSYSPTSPG 1906
Score = 101 bits (252), Expect = 4e-20
Identities = 54/84 (64%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP +SP+SP YSP SPSYSPTSP YSPSSP YSP+SP S SP Y
Sbjct: 1796 SPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKY 1855
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS Y+P
Sbjct: 1856 SPASPTYSPTSPKYSPSSP-TYSP 1878
Score = 93.6 bits (231), Expect = 1e-17
Identities = 56/98 (57%), Positives = 66/98 (67%), Gaps = 16/98 (16%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYS--------------PSSPTY 480
S +YSPS+ + SP SP YSPTSP+YSP SPSYSP SPSYS P+SP+Y
Sbjct: 1747 SPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSY 1806
Query: 479 SPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP+SP S +SP YSP S YSPT P YSPSS +Y+P
Sbjct: 1807 SPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSP-KYSP 1843
Score = 87.8 bits (216), Expect = 7e-16
Identities = 52/96 (54%), Positives = 60/96 (62%), Gaps = 13/96 (13%)
Frame = -1
Query: 617 PSIAYSPSNARL--SPASP----YSPTSPNY------SPTSPSYSPTSPSYSPSSPTYSP 474
P SP+N+ SPA P YSP SP+Y +P SP YSPTSPSYSP+SP YSP
Sbjct: 1560 PQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSP 1619
Query: 473 SSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1620 ASPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1654
Score = 73.2 bits (178), Expect = 2e-11
Identities = 37/61 (60%), Positives = 45/61 (73%), Gaps = 11/61 (18%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSS 468
S YSP++ + SPASP YSP+SP YSPTSP +YSPTSPSYSP+SP+YSP+S
Sbjct: 1845 SPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPTSPSYSPTSPSYSPTS 1904
Query: 467 P 465
P
Sbjct: 1905 P 1905
Score = 70.5 bits (171), Expect = 1e-10
Identities = 45/92 (48%), Positives = 55/92 (59%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYS-PTSPSYSPSSPTY---SPSSPYSSG 453
S S +SP+ + P SP SP SP PS + P SPSYSP+SP+Y SP++P S G
Sbjct: 1543 SESTGFSPAYSPAWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASPATPQSPG 1602
Query: 452 ---ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S GYSP P YSP+S Y+P
Sbjct: 1603 YSPTSPSYSPTSPGYSPASPSYSPTSP-SYSP 1633
Score = 63.9 bits (154), Expect = 1e-08
Identities = 44/93 (47%), Positives = 55/93 (59%), Gaps = 14/93 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPT-SPNYSPTSPSY-----------SPTSPSYSPSSPTYSPSSP 465
+SP+N+ + SP YSP SP P SP P SPSYSP+SP+Y P+SP
Sbjct: 1538 FSPANSESTGFSPAYSPAWSPQ--PQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASP 1595
Query: 464 YSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
++ SP YSP S YSPT PGYSP+S Y+P
Sbjct: 1596 -ATPQSPGYSPTSPSYSPTSPGYSPASP-SYSP 1626
[80][TOP]
>UniRef100_UPI0000E48671 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48671
Length = 1921
Score = 110 bits (275), Expect = 9e-23
Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SPASP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1615 SPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1674
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1675 SPTSPSYSPTSPSYSPTSP-SYSP 1697
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1636 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1695
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1696 SPTSPSYSPTSPSYSPTSP-SYSP 1718
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1657 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1716
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1717 SPTSPSYSPTSPSYSPTSP-SYSP 1739
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1678 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1737
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1738 SPTSPSYSPTSPSYSPTSP-SYSP 1760
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1699 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1758
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSP+S Y+P
Sbjct: 1759 SPSSPKYSPTSPSYSPTSP-SYSP 1781
Score = 108 bits (270), Expect = 4e-22
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSPSSP YSP+SP S SP Y
Sbjct: 1720 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSY 1779
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSP P YSPSS +Y+P
Sbjct: 1780 SPQSPSYSPGSPSYSPSSP-KYSP 1802
Score = 108 bits (270), Expect = 4e-22
Identities = 56/84 (66%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP + SP+SP YSPTSP+YSPTSPSYSPTSP++SPSSPTYSP+SP S SP Y
Sbjct: 1783 SPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKY 1842
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSP+S +Y+P
Sbjct: 1843 SPSSPKYSPTSPTYSPTSP-KYSP 1865
Score = 107 bits (267), Expect = 8e-22
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP+SP YSPTSP+YSPTSPSYSP SPSYSP SP+YSPSSP S SP Y
Sbjct: 1748 SPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSY 1807
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P +SPSS Y+P
Sbjct: 1808 SPTSPSYSPTSPNFSPSSP-TYSP 1830
Score = 104 bits (259), Expect = 7e-21
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S +YSP++ PASP +P SP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YS
Sbjct: 1588 SPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYS 1647
Query: 434 P-SAGYSPTLPGYSPSSTGQYTP 369
P S YSPT P YSP+S Y+P
Sbjct: 1648 PTSPSYSPTSPSYSPTSP-SYSP 1669
Score = 103 bits (257), Expect = 1e-20
Identities = 53/87 (60%), Positives = 64/87 (73%), Gaps = 5/87 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSP+SP YSPTSP+YSPTSP YSP+SPTYSP+SP S +SP Y
Sbjct: 1825 SPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTY 1884
Query: 437 SPS----AGYSPTLPGYSPSSTGQYTP 369
SP+ + YSPT P YSP+S Y+P
Sbjct: 1885 SPTSPKGSTYSPTSPSYSPTSP-SYSP 1910
Score = 102 bits (253), Expect = 3e-20
Identities = 53/76 (69%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSPS+ + SP SP YSPTSP YSP SP+YSPTSP YSPSSPTYSP+SP S SP SPS
Sbjct: 1842 YSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPT-SPS 1900
Query: 428 AGYSPTLPGYSPSSTG 381
YSPT P YSP+S G
Sbjct: 1901 --YSPTSPSYSPTSPG 1914
Score = 101 bits (252), Expect = 4e-20
Identities = 54/84 (64%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP +SP+SP YSP SPSYSPTSP YSPSSP YSP+SP S SP Y
Sbjct: 1804 SPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKY 1863
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS Y+P
Sbjct: 1864 SPASPTYSPTSPKYSPSSP-TYSP 1886
Score = 93.6 bits (231), Expect = 1e-17
Identities = 56/98 (57%), Positives = 66/98 (67%), Gaps = 16/98 (16%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYS--------------PSSPTY 480
S +YSPS+ + SP SP YSPTSP+YSP SPSYSP SPSYS P+SP+Y
Sbjct: 1755 SPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSY 1814
Query: 479 SPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP+SP S +SP YSP S YSPT P YSPSS +Y+P
Sbjct: 1815 SPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSP-KYSP 1851
Score = 87.8 bits (216), Expect = 7e-16
Identities = 52/96 (54%), Positives = 60/96 (62%), Gaps = 13/96 (13%)
Frame = -1
Query: 617 PSIAYSPSNARL--SPASP----YSPTSPNY------SPTSPSYSPTSPSYSPSSPTYSP 474
P SP+N+ SPA P YSP SP+Y +P SP YSPTSPSYSP+SP YSP
Sbjct: 1568 PQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTSPGYSP 1627
Query: 473 SSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1628 ASPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1662
Score = 73.2 bits (178), Expect = 2e-11
Identities = 37/61 (60%), Positives = 45/61 (73%), Gaps = 11/61 (18%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSS 468
S YSP++ + SPASP YSP+SP YSPTSP +YSPTSPSYSP+SP+YSP+S
Sbjct: 1853 SPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPTSPSYSPTSPSYSPTS 1912
Query: 467 P 465
P
Sbjct: 1913 P 1913
Score = 70.5 bits (171), Expect = 1e-10
Identities = 45/92 (48%), Positives = 55/92 (59%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYS-PTSPSYSPSSPTY---SPSSPYSSG 453
S S +SP+ + P SP SP SP PS + P SPSYSP+SP+Y SP++P S G
Sbjct: 1551 SESTGFSPAYSPAWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASPATPQSPG 1610
Query: 452 ---ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S GYSP P YSP+S Y+P
Sbjct: 1611 YSPTSPSYSPTSPGYSPASPSYSPTSP-SYSP 1641
Score = 63.9 bits (154), Expect = 1e-08
Identities = 44/93 (47%), Positives = 55/93 (59%), Gaps = 14/93 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPT-SPNYSPTSPSY-----------SPTSPSYSPSSPTYSPSSP 465
+SP+N+ + SP YSP SP P SP P SPSYSP+SP+Y P+SP
Sbjct: 1546 FSPANSESTGFSPAYSPAWSPQ--PQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASP 1603
Query: 464 YSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
++ SP YSP S YSPT PGYSP+S Y+P
Sbjct: 1604 -ATPQSPGYSPTSPSYSPTSPGYSPASP-SYSP 1634
[81][TOP]
>UniRef100_B3RM26 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3RM26_TRIAD
Length = 1784
Score = 110 bits (275), Expect = 9e-23
Identities = 56/81 (69%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ R SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1676 YSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPT 1735
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S +Y+P
Sbjct: 1736 SPRYSPTSPSYSPTSP-RYSP 1755
Score = 108 bits (271), Expect = 3e-22
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ R SP SP YSPTSP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP Y
Sbjct: 1610 SPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSY 1669
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1670 SPTSPKYSPTSPRYSPTSP-SYSP 1692
Score = 107 bits (268), Expect = 6e-22
Identities = 57/91 (62%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSP++ R SP SP YSPTSP YSPTSPSYSPTSPSYSP+SP YSP+SP
Sbjct: 1624 SPSYSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTSPRY 1683
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1684 SPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1713
Score = 107 bits (267), Expect = 8e-22
Identities = 55/85 (64%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP Y
Sbjct: 1701 SPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSY 1760
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTPH 366
SP S YSPT P YSP+S Y+P+
Sbjct: 1761 SPTSPSYSPTSPSYSPTSP-DYSPN 1784
Score = 105 bits (263), Expect = 2e-21
Identities = 56/91 (61%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSP++ R SP SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP
Sbjct: 1645 SPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTSPSY 1704
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1705 SPTSPSYSPTSPSYSPTSPRYSPTSP-SYSP 1734
Score = 98.2 bits (243), Expect = 5e-19
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
SI + + L+ S YSPTSP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP YS
Sbjct: 1576 SIILTVESKLLTDFSKYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYS 1635
Query: 434 P-SAGYSPTLPGYSPSSTGQYTP 369
P S YSPT P YSP+S +Y+P
Sbjct: 1636 PTSPSYSPTSPSYSPTSP-RYSP 1657
Score = 89.7 bits (221), Expect = 2e-16
Identities = 52/83 (62%), Positives = 58/83 (69%), Gaps = 9/83 (10%)
Frame = -1
Query: 590 ARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS---SGASPDYS 435
++ SP SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP SP S S SP YS
Sbjct: 1590 SKYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYS 1649
Query: 434 P-SAGYSPTLPGYSPSSTGQYTP 369
P S YSPT P YSP+S Y+P
Sbjct: 1650 PTSPRYSPTSPSYSPTSP-SYSP 1671
[82][TOP]
>UniRef100_UPI00019270E9 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 2 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270E9
Length = 2014
Score = 110 bits (274), Expect = 1e-22
Identities = 56/84 (66%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSY 1713
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S +Y+P
Sbjct: 1714 SPTSPSYSPTSPSYSPTSP-KYSP 1736
Score = 109 bits (273), Expect = 2e-22
Identities = 58/84 (69%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP YSPTSP YSPTSPSYSPSSP+YSPSSP S SP Y
Sbjct: 1766 SPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTY 1825
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1826 SPTSPTYSPTSPAYSPTSPA-YSP 1848
Score = 109 bits (272), Expect = 2e-22
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP YSPTSPSYSPTSPSYSPSSP YSP+SP S SP Y
Sbjct: 1710 SPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSY 1769
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSP+S +Y+P
Sbjct: 1770 SPSSPSYSPTSPKYSPTSP-KYSP 1792
Score = 108 bits (271), Expect = 3e-22
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1605 SPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1664
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1665 SPTSPSYSPTSPSYSPTSP-SYSP 1687
Score = 108 bits (270), Expect = 4e-22
Identities = 54/78 (69%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1626 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1685
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S YSPT P YSP+S
Sbjct: 1686 SPTSPSYSPTSPSYSPTS 1703
Score = 108 bits (269), Expect = 5e-22
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP Y
Sbjct: 1689 SPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSY 1748
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSP S Y+P
Sbjct: 1749 SPSSPQYSPTSPAYSPQSP-SYSP 1771
Score = 106 bits (264), Expect = 2e-21
Identities = 56/84 (66%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S A SPS+ SP SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP Y
Sbjct: 1584 SPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSY 1643
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1644 SPTSPSYSPTSPSYSPTSP-SYSP 1666
Score = 105 bits (261), Expect = 4e-21
Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP+SP YSP+SPNYSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP
Sbjct: 1797 YSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPT 1856
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S +Y+P
Sbjct: 1857 SPVYSPTSPAYSPTSP-KYSP 1876
Score = 105 bits (261), Expect = 4e-21
Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 9/88 (10%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+
Sbjct: 1818 YSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPT 1877
Query: 428 AG--------YSPTLPGYSPSSTGQYTP 369
+ YSPT P YSP+STG Y+P
Sbjct: 1878 SPKYSPTSPIYSPTSPAYSPTSTG-YSP 1904
Score = 104 bits (259), Expect = 7e-21
Identities = 54/81 (66%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSP+SP YSPTSP+YSP SPSYSPSSP+YSP+SP S SP YSP
Sbjct: 1734 YSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPT 1793
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSPSS Y+P
Sbjct: 1794 SPKYSPTSPSYSPSSP-SYSP 1813
Score = 102 bits (254), Expect = 3e-20
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+S S SP+Y
Sbjct: 1850 SPAYSPTSPVYSPTSPAYSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEY 1909
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSP+S +Y+P
Sbjct: 1910 SPSSPKYSPTTPQYSPTSP-KYSP 1932
Score = 99.0 bits (245), Expect = 3e-19
Identities = 59/98 (60%), Positives = 65/98 (66%), Gaps = 16/98 (16%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP SP S
Sbjct: 1661 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSY 1720
Query: 458 SGASPDYSP--------SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSPSS QY+P
Sbjct: 1721 SPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSP-QYSP 1757
Score = 94.0 bits (232), Expect = 9e-18
Identities = 49/85 (57%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPTS YSPTSP YSPSSP YSP++P S SP YSP
Sbjct: 1874 YSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPA 1933
Query: 431 SAGYSPTLPGYSPSSTGQYTPHEGD 357
S YSP+ P + Y+P E D
Sbjct: 1934 SPTYSPSTPTDKSVGSINYSPLEPD 1958
Score = 92.8 bits (229), Expect = 2e-17
Identities = 54/91 (59%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP+SP YSPTSP YSP SPSYSP+SPSYSP+SP YSP SP S
Sbjct: 1738 SPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKY 1797
Query: 458 SGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
S SP YSPS+ YSP+ P YSP+S Y+P
Sbjct: 1798 SPTSPSYSPSSPSYSPSSPNYSPTSP-TYSP 1827
Score = 88.6 bits (218), Expect = 4e-16
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ +SP+ + YSP SP ++P SP+ SP+SP YSP+SP YSP+SP S SP
Sbjct: 1555 SPAGGFSPAWSPQDSIPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPS 1614
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S GYSPT P YSP+S Y+P
Sbjct: 1615 YSPTSPGYSPTSPSYSPTSP-SYSP 1638
Score = 71.2 bits (173), Expect = 6e-11
Identities = 49/115 (42%), Positives = 58/115 (50%), Gaps = 31/115 (26%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPS------------------ 492
S YSP++ SP+SP YSPT+P YSPTSP YSP SP+YSPS
Sbjct: 1899 STGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPD 1958
Query: 491 ----SPTYSPSSPYSSGASPDYSPSA-GYSPTLP------GYSPSS-TGQYTPHE 363
+PTYSP +P YSP G+S T YSPSS +G TP E
Sbjct: 1959 YSPGTPTYSPD------GTPTYSPDGRGFSGTAAKNISPMDYSPSSPSGPGTPEE 2007
[83][TOP]
>UniRef100_UPI00019270BB PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 1 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270BB
Length = 2041
Score = 110 bits (274), Expect = 1e-22
Identities = 56/84 (66%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1681 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSY 1740
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S +Y+P
Sbjct: 1741 SPTSPSYSPTSPSYSPTSP-KYSP 1763
Score = 109 bits (273), Expect = 2e-22
Identities = 58/84 (69%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP YSPTSP YSPTSPSYSPSSP+YSPSSP S SP Y
Sbjct: 1793 SPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTY 1852
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1853 SPTSPTYSPTSPAYSPTSPA-YSP 1875
Score = 109 bits (272), Expect = 2e-22
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP YSPTSPSYSPTSPSYSPSSP YSP+SP S SP Y
Sbjct: 1737 SPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSY 1796
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSP+S +Y+P
Sbjct: 1797 SPSSPSYSPTSPKYSPTSP-KYSP 1819
Score = 108 bits (271), Expect = 3e-22
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1632 SPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1691
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1692 SPTSPSYSPTSPSYSPTSP-SYSP 1714
Score = 108 bits (270), Expect = 4e-22
Identities = 54/78 (69%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1653 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1712
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S YSPT P YSP+S
Sbjct: 1713 SPTSPSYSPTSPSYSPTS 1730
Score = 108 bits (269), Expect = 5e-22
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP Y
Sbjct: 1716 SPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSY 1775
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSP S Y+P
Sbjct: 1776 SPSSPQYSPTSPAYSPQSP-SYSP 1798
Score = 106 bits (264), Expect = 2e-21
Identities = 56/84 (66%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S A SPS+ SP SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S SP Y
Sbjct: 1611 SPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSY 1670
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1671 SPTSPSYSPTSPSYSPTSP-SYSP 1693
Score = 105 bits (261), Expect = 4e-21
Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP+SP YSP+SPNYSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP
Sbjct: 1824 YSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPT 1883
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S +Y+P
Sbjct: 1884 SPVYSPTSPAYSPTSP-KYSP 1903
Score = 105 bits (261), Expect = 4e-21
Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 9/88 (10%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP+
Sbjct: 1845 YSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSPKYSPT 1904
Query: 428 AG--------YSPTLPGYSPSSTGQYTP 369
+ YSPT P YSP+STG Y+P
Sbjct: 1905 SPKYSPTSPIYSPTSPAYSPTSTG-YSP 1931
Score = 104 bits (259), Expect = 7e-21
Identities = 54/81 (66%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSP+SP YSPTSP+YSP SPSYSPSSP+YSP+SP S SP YSP
Sbjct: 1761 YSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPT 1820
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSPSS Y+P
Sbjct: 1821 SPKYSPTSPSYSPSSP-SYSP 1840
Score = 102 bits (254), Expect = 3e-20
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+S S SP+Y
Sbjct: 1877 SPAYSPTSPVYSPTSPAYSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEY 1936
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSP+S +Y+P
Sbjct: 1937 SPSSPKYSPTTPQYSPTSP-KYSP 1959
Score = 99.0 bits (245), Expect = 3e-19
Identities = 59/98 (60%), Positives = 65/98 (66%), Gaps = 16/98 (16%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP SP S
Sbjct: 1688 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSY 1747
Query: 458 SGASPDYSP--------SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSPSS QY+P
Sbjct: 1748 SPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSP-QYSP 1784
Score = 94.0 bits (232), Expect = 9e-18
Identities = 49/85 (57%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPTS YSPTSP YSPSSP YSP++P S SP YSP
Sbjct: 1901 YSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPA 1960
Query: 431 SAGYSPTLPGYSPSSTGQYTPHEGD 357
S YSP+ P + Y+P E D
Sbjct: 1961 SPTYSPSTPTDKSVGSINYSPLEPD 1985
Score = 92.8 bits (229), Expect = 2e-17
Identities = 54/91 (59%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP+SP YSPTSP YSP SPSYSP+SPSYSP+SP YSP SP S
Sbjct: 1765 SPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKY 1824
Query: 458 SGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
S SP YSPS+ YSP+ P YSP+S Y+P
Sbjct: 1825 SPTSPSYSPSSPSYSPSSPNYSPTSP-TYSP 1854
Score = 89.0 bits (219), Expect = 3e-16
Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S Y PS +R + YSP SP ++P SP+ SP+SP YSP+SP YSP+SP S SP YS
Sbjct: 1584 SSPYIPSPSRNVMSPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYS 1643
Query: 434 P-SAGYSPTLPGYSPSSTGQYTP 369
P S GYSPT P YSP+S Y+P
Sbjct: 1644 PTSPGYSPTSPSYSPTSP-SYSP 1665
Score = 83.6 bits (205), Expect = 1e-14
Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARL--SP-ASPYSPT------SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
S A+SP ++ SP +SPY P+ SP+YSP SP+++P SP+ SPSSP YSP+SP
Sbjct: 1568 SPAWSPQDSMSLGSPDSSPYIPSPSRNVMSPSYSPNSPAFNPQSPAMSPSSPGYSPTSPL 1627
Query: 461 SSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT PGYSP+S Y+P
Sbjct: 1628 YSPTSPGYSPTSPSYSPTSPGYSPTSP-SYSP 1658
Score = 71.2 bits (173), Expect = 6e-11
Identities = 49/115 (42%), Positives = 58/115 (50%), Gaps = 31/115 (26%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPS------------------ 492
S YSP++ SP+SP YSPT+P YSPTSP YSP SP+YSPS
Sbjct: 1926 STGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEPD 1985
Query: 491 ----SPTYSPSSPYSSGASPDYSPSA-GYSPTLP------GYSPSS-TGQYTPHE 363
+PTYSP +P YSP G+S T YSPSS +G TP E
Sbjct: 1986 YSPGTPTYSPD------GTPTYSPDGRGFSGTAAKNISPMDYSPSSPSGPGTPEE 2034
[84][TOP]
>UniRef100_UPI000186D846 predicted protein n=1 Tax=Pediculus humanus corporis
RepID=UPI000186D846
Length = 1885
Score = 110 bits (274), Expect = 1e-22
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1591 SPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1650
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1651 SPTSPSYSPTSPSYSPTSP-SYSP 1673
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1671
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1672 SPTSPSYSPTSPSYSPTSP-SYSP 1694
Score = 109 bits (272), Expect = 2e-22
Identities = 58/91 (63%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1633 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1692
Query: 437 SP--------SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS YTP
Sbjct: 1693 SPTSPSYSRTSPSYSPTSPSYSPSSP-NYTP 1722
Score = 102 bits (254), Expect = 3e-20
Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ +P SP YSPTSP+YSP+SP+YSP SPSYSP+SP+YSP+SP
Sbjct: 1563 SPSYSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSY 1622
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1623 SPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1652
Score = 100 bits (248), Expect = 1e-19
Identities = 60/103 (58%), Positives = 68/103 (66%), Gaps = 21/103 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP--------- 465
S +YSP++ SP SP YSPTSP+YS TSPSYSPTSPSYSPSSP Y+P+SP
Sbjct: 1675 SPSYSPTSPSYSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPTSPSL 1734
Query: 464 YS----SGASPDYSP-SAGYSPTLPGYSPSS------TGQYTP 369
YS S ASP YSP S YSPT P YSP+S + QYTP
Sbjct: 1735 YSSPRYSPASPSYSPGSPKYSPTSPSYSPTSPSYASVSPQYTP 1777
Score = 94.4 bits (233), Expect = 7e-18
Identities = 54/109 (49%), Positives = 66/109 (60%), Gaps = 15/109 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPN------YSPTSPSYSPTSPSYSPSSPTYSPSSPYSS 456
S +YSPS+ +PASP +SPTSP+ YSP SPSYSP SP YSP+SP+YSP+SP +
Sbjct: 1710 SPSYSPSSPNYTPASPSFSPTSPSLYSSPRYSPASPSYSPGSPKYSPTSPSYSPTSPSYA 1769
Query: 455 GASPDYSP--------SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKK 333
SP Y+P S YSPT P YSPSS +TP + T K
Sbjct: 1770 SVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSP-SHTPGASTRYSPTSPK 1817
Score = 92.0 bits (227), Expect = 3e-17
Identities = 51/90 (56%), Positives = 63/90 (70%), Gaps = 9/90 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYS-------PSSPTYSPSSPYS 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYS P+SP+YS +SP
Sbjct: 1647 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRTSPSY 1706
Query: 458 SGASPDYSPSA-GYSPTLPGYSPSSTGQYT 372
S SP YSPS+ Y+P P +SP+S Y+
Sbjct: 1707 SPTSPSYSPSSPNYTPASPSFSPTSPSLYS 1736
Score = 90.9 bits (224), Expect = 8e-17
Identities = 51/94 (54%), Positives = 59/94 (62%), Gaps = 18/94 (19%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---------YSPTSPNYSPTSPSYSPTSPSYSPS-------SPT 483
S YSP++ SP+SP YSPTSP YSPTS SYSP SP YSPS SPT
Sbjct: 1786 SPTYSPTSPSYSPSSPSHTPGASTRYSPTSPKYSPTSLSYSPASPQYSPSSSKYSPTSPT 1845
Query: 482 YSPSSPYSSGASPDYSPSA--GYSPTLPGYSPSS 387
Y+P+SP S +SP YSP+ YSPT P YSP+S
Sbjct: 1846 YTPTSPDYSASSPTYSPTGPPSYSPTSPTYSPTS 1879
Score = 89.0 bits (219), Expect = 3e-16
Identities = 53/100 (53%), Positives = 61/100 (61%), Gaps = 17/100 (17%)
Frame = -1
Query: 605 YSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPT--------YSP 474
YSP++ SP SP Y+PTSP YSPTSP+YSPTSPSYSPSSP+ YSP
Sbjct: 1754 YSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSSPSHTPGASTRYSP 1813
Query: 473 SSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTPHEGD 357
+SP S S YSP S YSP+ YSP+S YTP D
Sbjct: 1814 TSPKYSPTSLSYSPASPQYSPSSSKYSPTSP-TYTPTSPD 1852
Score = 86.7 bits (213), Expect = 1e-15
Identities = 48/89 (53%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPN--------YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 453
YSP++ SP SP YSP+SP+ YSPTSP YSPTS SYSP+SP YSPSS S
Sbjct: 1782 YSPTSPTYSPTSPSYSPSSPSHTPGASTRYSPTSPKYSPTSLSYSPASPQYSPSSSKYSP 1841
Query: 452 ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S YS + P YSP+ Y+P
Sbjct: 1842 TSPTYTPTSPDYSASSPTYSPTGPPSYSP 1870
Score = 83.2 bits (204), Expect = 2e-14
Identities = 52/99 (52%), Positives = 60/99 (60%), Gaps = 15/99 (15%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSP--------------SYSPTSPSYSPSSPT 483
SPS + PSN+ P SP SP+YSP+SP +YSPTSPSYSPSSP
Sbjct: 1543 SPS-SPGPSNSPYVP-SPGGGMSPSYSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPN 1600
Query: 482 YSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1601 YSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1638
Score = 73.9 bits (180), Expect = 1e-11
Identities = 35/61 (57%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-TYSPSSPYSSGASPD 441
S++YSP++ + SP+S YSPTSP Y+PTSP YS +SP+YSP+ P +YSP+SP S SP+
Sbjct: 1822 SLSYSPASPQYSPSSSKYSPTSPTYTPTSPDYSASSPTYSPTGPPSYSPTSPTYSPTSPE 1881
Query: 440 Y 438
Y
Sbjct: 1882 Y 1882
[85][TOP]
>UniRef100_UPI000179348F PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179348F
Length = 1862
Score = 110 bits (274), Expect = 1e-22
Identities = 57/91 (62%), Positives = 66/91 (72%), Gaps = 7/91 (7%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
SP+ YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1625 SPNYNYSPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1684
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1685 SPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1714
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1653 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1712
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1713 SPTSPSYSPTSPSYSPTSP-SYSP 1735
Score = 104 bits (260), Expect = 5e-21
Identities = 59/112 (52%), Positives = 71/112 (63%), Gaps = 27/112 (24%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSPSSP + +SP Y
Sbjct: 1688 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPSY 1747
Query: 437 SPSA--------------------GYSPTLPGYSPS------STGQYTPHEG 360
+PSA YSPT P YSPS S+ Q+TP+ G
Sbjct: 1748 TPSATSGTSNYKYSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSLQHTPNAG 1799
Score = 98.2 bits (243), Expect = 5e-19
Identities = 57/94 (60%), Positives = 64/94 (68%), Gaps = 12/94 (12%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP
Sbjct: 1660 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP----T 1715
Query: 449 SPDYSP-SAGYSPTLPGYSPS------STGQYTP 369
SP YSP S YSPT P YSPS S+ YTP
Sbjct: 1716 SPSYSPTSPSYSPTSPSYSPSSPQYAASSPSYTP 1749
Score = 97.1 bits (240), Expect = 1e-18
Identities = 51/84 (60%), Positives = 60/84 (71%), Gaps = 6/84 (7%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
+P + +SP YSPTSP+YSPTSP SYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1618 TPKYSSMSPNYNYSPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1677
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1678 SPTSPSYSPTSPSYSPTSP-SYSP 1700
Score = 80.1 bits (196), Expect = 1e-13
Identities = 53/130 (40%), Positives = 65/130 (50%), Gaps = 48/130 (36%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSP---------------- 486
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSPSSP
Sbjct: 1695 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPSYTPSATSG 1754
Query: 485 -----------------TYSPSSPYSSGASPDYSPSA--------------GYSPTLPGY 399
TYSP+SP S ++ YSPS+ YSP+ P Y
Sbjct: 1755 TSNYKYSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSLQHTPNAGGTQYNQSYSPSSPVY 1814
Query: 398 SPSSTGQYTP 369
SP++ +P
Sbjct: 1815 SPTNFSMASP 1824
Score = 77.0 bits (188), Expect = 1e-12
Identities = 55/114 (48%), Positives = 63/114 (55%), Gaps = 30/114 (26%)
Frame = -1
Query: 620 SPSIAY--SPSNARLSPA---SPYSPTSPNYSP-------------------TSPSYSPT 513
SP+ Y SP LSP+ + YSPTSP YS TSPSYSPT
Sbjct: 1581 SPNYNYPSSPQFGSLSPSMTPTNYSPTSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPT 1640
Query: 512 SP-----SYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP SYSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1641 SPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1693
Score = 76.6 bits (187), Expect = 2e-12
Identities = 48/114 (42%), Positives = 55/114 (48%), Gaps = 28/114 (24%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPT--------------------SPSY 501
+PS SN + SP SP SP YSPTSP YSP+ + SY
Sbjct: 1748 TPSATSGTSNYKYSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSLQHTPNAGGTQYNQSY 1807
Query: 500 SPSSPTYSP-----SSPYSSGASPDYSPSAG---YSPTLPGYSPSSTGQYTPHE 363
SPSSP YSP +SP S SP YSP G YSP+ P YSP+S P E
Sbjct: 1808 SPSSPVYSPTNFSMASPRYSPTSPTYSPGVGSPHYSPSSPSYSPTSPNYSGPDE 1861
Score = 64.3 bits (155), Expect = 8e-09
Identities = 36/60 (60%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Frame = -1
Query: 608 AYSPSNARLSPASPYSPTSPNYSPTSPSYSP--TSPSYSPSSPTYSPSSPYSSGASPDYS 435
+YSPS+ SP + +S SP YSPTSP+YSP SP YSPSSP+YSP+SP SG PD S
Sbjct: 1806 SYSPSSPVYSPTN-FSMASPRYSPTSPTYSPGVGSPHYSPSSPSYSPTSPNYSG--PDES 1862
[86][TOP]
>UniRef100_UPI000179338A PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179338A
Length = 1862
Score = 110 bits (274), Expect = 1e-22
Identities = 57/91 (62%), Positives = 66/91 (72%), Gaps = 7/91 (7%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
SP+ YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1625 SPNYNYSPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1684
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1685 SPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1714
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1653 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1712
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1713 SPTSPSYSPTSPSYSPTSP-SYSP 1735
Score = 105 bits (261), Expect = 4e-21
Identities = 59/112 (52%), Positives = 71/112 (63%), Gaps = 27/112 (24%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSPSSP + +SP Y
Sbjct: 1688 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYTASSPSY 1747
Query: 437 SPSA--------------------GYSPTLPGYSPS------STGQYTPHEG 360
+PSA YSPT P YSPS S+ Q+TP+ G
Sbjct: 1748 TPSATSGASNYKYSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSVQHTPNAG 1799
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/87 (65%), Positives = 63/87 (72%), Gaps = 6/87 (6%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP
Sbjct: 1660 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP----T 1715
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYT 372
SP YSP S YSPT P YSPSS QYT
Sbjct: 1716 SPSYSPTSPSYSPTSPSYSPSSP-QYT 1741
Score = 97.1 bits (240), Expect = 1e-18
Identities = 51/84 (60%), Positives = 60/84 (71%), Gaps = 6/84 (7%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
+P + +SP YSPTSP+YSPTSP SYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1618 TPKYSSMSPNYNYSPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1677
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1678 SPTSPSYSPTSPSYSPTSP-SYSP 1700
Score = 77.0 bits (188), Expect = 1e-12
Identities = 48/114 (42%), Positives = 55/114 (48%), Gaps = 28/114 (24%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPT--------------------SPSY 501
+PS SN + SP SP SP YSPTSP YSP+ + SY
Sbjct: 1748 TPSATSGASNYKYSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSVQHTPNAGVTQYNQSY 1807
Query: 500 SPSSPTYSP-----SSPYSSGASPDYSPSAG---YSPTLPGYSPSSTGQYTPHE 363
SPSSP YSP +SP S SP YSP G YSP+ P YSP+S P E
Sbjct: 1808 SPSSPVYSPTNFSLASPRYSPTSPTYSPGVGSPNYSPSSPSYSPTSPNYSGPEE 1861
Score = 76.6 bits (187), Expect = 2e-12
Identities = 54/103 (52%), Positives = 63/103 (61%), Gaps = 19/103 (18%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPT---SPNYSP---------TSPSYSPTSP-----SYSP 495
SPS+ +P+N SP SP YS T +P YS TSPSYSPTSP SYSP
Sbjct: 1596 SPSM--TPTN--YSPTSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPTSPSYSHTSYSP 1651
Query: 494 SSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1652 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1693
[87][TOP]
>UniRef100_A7NVN8 Chromosome chr18 scaffold_1, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7NVN8_VITVI
Length = 89
Score = 110 bits (274), Expect = 1e-22
Identities = 53/75 (70%), Positives = 60/75 (80%), Gaps = 7/75 (9%)
Frame = -1
Query: 557 TSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD-------YSPSAGYSPTLPGY 399
+S + SPTSPSYSPTSPSYSP+SPTYSP+SPY+SG SPD YSPSAGYSP+ PGY
Sbjct: 9 SSYSCSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPSAGYSPSAPGY 68
Query: 398 SPSSTGQYTPHEGDK 354
SPSST QYTP +K
Sbjct: 69 SPSSTSQYTPQMSNK 83
[88][TOP]
>UniRef100_C4R4Y0 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R4Y0_PICPG
Length = 1743
Score = 110 bits (274), Expect = 1e-22
Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1578 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQY 1637
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S QY+P
Sbjct: 1638 SPTSPQYSPTSPQYSPTSP-QYSP 1660
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S ++P++ R SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1543 SPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1602
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1603 SPTSPSYSPTSPSYSPTSP-SYSP 1625
Score = 106 bits (265), Expect = 1e-21
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP Y
Sbjct: 1620 SPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQY 1679
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S QY+P
Sbjct: 1680 SPTSPQYSPTSPQYSPTSP-QYSP 1702
Score = 106 bits (264), Expect = 2e-21
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP S SP Y
Sbjct: 1599 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQY 1658
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S QY+P
Sbjct: 1659 SPTSPQYSPTSPQYSPTSP-QYSP 1681
Score = 105 bits (263), Expect = 2e-21
Identities = 54/81 (66%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP
Sbjct: 1644 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1703
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S QY+P
Sbjct: 1704 SPQYSPTSPQYSPTSP-QYSP 1723
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/88 (64%), Positives = 64/88 (72%), Gaps = 9/88 (10%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS---SGA 450
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S S
Sbjct: 1553 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1612
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S YSPT P YSP+S QY+P
Sbjct: 1613 SPSYSPTSPSYSPTSPQYSPTSP-QYSP 1639
Score = 96.3 bits (238), Expect = 2e-18
Identities = 48/81 (59%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y P++ LS SP ++PTSP ++PTSP YSPTSP YSP+SP+YSP+SP S SP YSP
Sbjct: 1525 YQPTSPGLSATSPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPT 1584
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1585 SPSYSPTSPSYSPTSP-SYSP 1604
Score = 93.6 bits (231), Expect = 1e-17
Identities = 49/87 (56%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+
Sbjct: 1665 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPA 1724
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDKKD 348
+ P YSPS +++P+ G+ K+
Sbjct: 1725 S------PQYSPS---RHSPN-GESKE 1741
Score = 84.7 bits (208), Expect = 6e-15
Identities = 41/69 (59%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = -1
Query: 572 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYS 396
SPY PTSP S TSP ++PTSP ++P+SP YSP+SP S SP YSP S YSPT P YS
Sbjct: 1523 SPYQPTSPGLSATSPGFAPTSPGFAPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYS 1582
Query: 395 PSSTGQYTP 369
P+S Y+P
Sbjct: 1583 PTSP-SYSP 1590
Score = 69.3 bits (168), Expect = 2e-10
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP + R + Y+ Y PTSP S TSP ++P+SP ++P+SP S SP
Sbjct: 1500 SPMAETGSGDDRSGGLTEYAGIQSPYQPTSPGLSATSPGFAPTSPGFAPTSPRYSPTSPG 1559
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1560 YSPTSPSYSPTSPSYSPTSP-SYSP 1583
[89][TOP]
>UniRef100_UPI0000D5670C PREDICTED: similar to GA13798-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D5670C
Length = 2007
Score = 109 bits (273), Expect = 2e-22
Identities = 58/91 (63%), Positives = 66/91 (72%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1659 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1718
Query: 437 SP--------SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS +YTP
Sbjct: 1719 SPTSPSYSPTSPSYSPTSPSYSPSSP-RYTP 1748
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1638 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1697
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1698 SPTSPSYSPTSPSYSPTSP-SYSP 1720
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1620 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1679
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1680 SPSYSPTSPSYSPTSP-SYSP 1699
Score = 107 bits (268), Expect = 6e-22
Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSPSSP + ASP Y
Sbjct: 1694 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSY 1753
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S YSP+ P YSP+S
Sbjct: 1754 SPTSPSYSPSSPQYSPAS 1771
Score = 106 bits (265), Expect = 1e-21
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSPS+ R +PASP YSP+SP YSP SPS+SP+SP YSP+SP+YSP+SP
Sbjct: 1736 SPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPASPSFSPSSPKYSPTSPSYSPTSPSF 1795
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+G SP YSP S YSPT P YSPSS Q+TP
Sbjct: 1796 AGGSPQYSPTSPSYSPTSPNYSPSSP-QHTP 1825
Score = 106 bits (264), Expect = 2e-21
Identities = 57/86 (66%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
SPS+ +P + SP SP YSPTSPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP
Sbjct: 1596 SPSM--TPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1653
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1654 SYSPTSPSYSPTSPSYSPTSP-SYSP 1678
Score = 104 bits (259), Expect = 7e-21
Identities = 54/90 (60%), Positives = 67/90 (74%), Gaps = 8/90 (8%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSP+SP Y+P SPSYSP+SP+YSPSSP S ASP +
Sbjct: 1715 SPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPASPSF 1774
Query: 437 SPSA-GYSPTLPGYSPSS------TGQYTP 369
SPS+ YSPT P YSP+S + QY+P
Sbjct: 1775 SPSSPKYSPTSPSYSPTSPSFAGGSPQYSP 1804
Score = 102 bits (255), Expect = 2e-20
Identities = 59/100 (59%), Positives = 70/100 (70%), Gaps = 17/100 (17%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPS-------YSPTSPSYSPSSPTY 480
S +YSPS+ + SPASP YSPTSP+YSPTSPS YSPTSPSYSP+SP Y
Sbjct: 1757 SPSYSPSSPQYSPASPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNY 1816
Query: 479 SPSSP-YSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTPH 366
SPSSP ++ AS YSPS+ YSP+ P YSP+S QY+PH
Sbjct: 1817 SPSSPQHTPAASSRYSPSSPNYSPSSPSYSPTSP-QYSPH 1855
Score = 93.2 bits (230), Expect = 2e-17
Identities = 51/92 (55%), Positives = 60/92 (65%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
S +YSP++ SP+SP YSP+SPNYSP+SPSYSPTSP YSP S YSP+SP
Sbjct: 1806 SPSYSPTSPNYSPSSPQHTPAASSRYSPSSPNYSPSSPSYSPTSPQYSPHSTKYSPTSPT 1865
Query: 461 SSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+ SP YSP S YS P YSPSS Y+P
Sbjct: 1866 YTPTSPSYSPASPAYSSQPPRYSPSSP-SYSP 1896
Score = 89.7 bits (221), Expect = 2e-16
Identities = 45/73 (61%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Frame = -1
Query: 581 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 408
SP+SP + PTSP+ +P SP YSPTSP YSP+SP YSP+SP S SP YSP S YSPT
Sbjct: 1586 SPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTS 1645
Query: 407 PGYSPSSTGQYTP 369
P YSP+S Y+P
Sbjct: 1646 PSYSPTSP-SYSP 1657
Score = 89.0 bits (219), Expect = 3e-16
Identities = 48/83 (57%), Positives = 58/83 (69%), Gaps = 10/83 (12%)
Frame = -1
Query: 605 YSPSN--------ARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 453
YSPS+ +R SP+SP YSP+SP+YSPTSP YSP S YSP+SPTY+P+SP S
Sbjct: 1816 YSPSSPQHTPAASSRYSPSSPNYSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSP 1875
Query: 452 ASPDYSPS-AGYSPTLPGYSPSS 387
ASP YS YSP+ P YSP+S
Sbjct: 1876 ASPAYSSQPPRYSPSSPSYSPTS 1898
Score = 87.0 bits (214), Expect = 1e-15
Identities = 48/84 (57%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S A SP A SP YSP+SP++ PTSPS +P SP YSP+SP YSP+SP S SP Y
Sbjct: 1568 SPAMSPFMASPHGQSPSYSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNYSPTSPSY 1627
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1628 SPTSPSYSPTSPSYSPTSP-SYSP 1650
Score = 84.7 bits (208), Expect = 6e-15
Identities = 51/99 (51%), Positives = 61/99 (61%), Gaps = 15/99 (15%)
Frame = -1
Query: 620 SPSIA-----YSPSNARLSPASP-YSPTSPN--------YSPTSPSYSPTSPSYSPSSPT 483
SPS A YSP++ SP SP YSP+SP YSP+SP+YSP+SPSYSP+SP
Sbjct: 1792 SPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTPAASSRYSPSSPNYSPSSPSYSPTSPQ 1851
Query: 482 YSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S S SP Y+P S YSP P YS S +Y+P
Sbjct: 1852 YSPHSTKYSPTSPTYTPTSPSYSPASPAYS-SQPPRYSP 1889
Score = 84.3 bits (207), Expect = 7e-15
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSPS+ SP SP YSP S YSPTSP+Y+PTSPSYSP+SP YS P S +SP YSP+
Sbjct: 1838 YSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSPASPAYSSQPPRYSPSSPSYSPT 1897
Query: 428 AGYS-PTLPGYSPSST 384
+ + P P YS SS+
Sbjct: 1898 SPITLPPSPYYSRSSS 1913
Score = 80.1 bits (196), Expect = 1e-13
Identities = 43/95 (45%), Positives = 56/95 (58%), Gaps = 16/95 (16%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP + + SP SP Y+PTSP+YSP SP+YS P YSPSSP+YSP+SP + SP YS S
Sbjct: 1852 YSPHSTKYSPTSPTYTPTSPSYSPASPAYSSQPPRYSPSSPSYSPTSPITLPPSPYYSRS 1911
Query: 428 AG---------------YSPTLPGYSPSSTGQYTP 369
+ YSPT+P ++ Y+P
Sbjct: 1912 SSTYTFSSRDYTYSSPPYSPTIPQDEMFTSPVYSP 1946
Score = 72.0 bits (175), Expect = 4e-11
Identities = 47/90 (52%), Positives = 56/90 (62%), Gaps = 10/90 (11%)
Frame = -1
Query: 608 AYSPSNARLSPASPYSPTSPNYSPT--SPSYSP-------TSPSYSPSSPTYSPSSPYSS 456
A+SPS A S AS SP +SPT SP+ SP SPSYSPSSP++ P+SP +
Sbjct: 1543 AFSPSAA--SDASGMSPGYGAWSPTPQSPAMSPFMASPHGQSPSYSPSSPSFQPTSPSMT 1600
Query: 455 GASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S GYSPT P YSP+S Y+P
Sbjct: 1601 PVSPGYSPTSPGYSPTSPNYSPTSP-SYSP 1629
Score = 57.0 bits (136), Expect = 1e-06
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP-- 444
S AYS R SP+SP YSPTSP P SP YS +S +Y+ SS Y+ SSP S P
Sbjct: 1877 SPAYSSQPPRYSPSSPSYSPTSPITLPPSPYYSRSSSTYTFSSRDYTYSSPPYSPTIPQD 1936
Query: 443 DYSPSAGYSPTLPGY 399
+ S YSPT+P Y
Sbjct: 1937 EMFTSPVYSPTIPKY 1951
[90][TOP]
>UniRef100_Q99366 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99366_SOYBN
Length = 625
Score = 109 bits (273), Expect = 2e-22
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 465 SPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGY 524
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y P
Sbjct: 525 SPTSPSYSPTSPSYSPTSP-SYNP 547
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP YSPTSP+YSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 444 SPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 503
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S G Y+P
Sbjct: 504 SPTSPSYSPTSPAYSPTSPG-YSP 526
Score = 108 bits (271), Expect = 3e-22
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSPS+ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 402 SPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAY 461
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 462 SPTSPAYSPTSPAYSPTSP-SYSP 484
Score = 107 bits (268), Expect = 6e-22
Identities = 55/84 (65%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 423 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSY 482
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 483 SPTSPSYSPTSPSYSPTSP-SYSP 505
Score = 107 bits (266), Expect = 1e-21
Identities = 56/84 (66%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSPS+ SP+SP YSPTSP YSPTSP YSPTSP+YSPSSP YSP+SP S SP Y
Sbjct: 367 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 426
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 427 SPTSPSYSPTSPSYSPTSP-SYSP 449
Score = 101 bits (252), Expect = 4e-20
Identities = 52/83 (62%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP YSPTSP YSPTSPSYSP+SP+YSP+SP + S Y
Sbjct: 493 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKY 552
Query: 437 SPSAGYSPTLPGYSPSSTGQYTP 369
SPS YSP+ P SPSS Y+P
Sbjct: 553 SPSLAYSPSSPRLSPSS--PYSP 573
Score = 101 bits (251), Expect = 6e-20
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 471
SPS+AYSPS+ RLSP+SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS
Sbjct: 553 SPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 602
Score = 99.8 bits (247), Expect = 2e-19
Identities = 59/97 (60%), Positives = 65/97 (67%), Gaps = 15/97 (15%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSY-------------SPSSPTYS 477
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSY SPSSP S
Sbjct: 507 SPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLS 566
Query: 476 PSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
PSSPYS SP+YSP S YSPT P YSPSS Y+P
Sbjct: 567 PSSPYSP-TSPNYSPTSPSYSPTSPSYSPSSP-TYSP 601
Score = 94.7 bits (234), Expect = 5e-18
Identities = 55/91 (60%), Positives = 61/91 (67%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S YSPS+ SP SP YSPTSP YSPTSP+YSP+SP YSP+SP YSP SP S
Sbjct: 374 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSY 433
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 434 SPTSPSYSPTSPSYSPTSPSYSPTSPA-YSP 463
Score = 93.6 bits (231), Expect = 1e-17
Identities = 57/97 (58%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPA-----SPY------SPTS-PNYSPTSPSYSPTSPSYSPSSPTYS 477
SPS SP N RLSP SPY SPTS P YSP+SP YSP+SP YSP+SP YS
Sbjct: 334 SPSYLLSP-NLRLSPTTDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 392
Query: 476 PSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
P+SP S SP YSPS+ GYSPT P YSP+S Y+P
Sbjct: 393 PTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP-SYSP 428
Score = 81.3 bits (199), Expect = 6e-14
Identities = 38/62 (61%), Positives = 50/62 (80%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S +Y+P +A+ SP+ YSP+SP SP+SP YSPTSP+YSP+SP+YSP+SP S +SP YS
Sbjct: 542 SPSYNPQSAKYSPSLAYSPSSPRLSPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYS 600
Query: 434 PS 429
PS
Sbjct: 601 PS 602
Score = 75.5 bits (184), Expect = 3e-12
Identities = 46/91 (50%), Positives = 54/91 (59%), Gaps = 14/91 (15%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNY-------------SPTSPSYSPTSPSYSPSSPTYS 477
S YSP++ SP SP YSPTSP+Y SP+SP SP+SP YSP+SP YS
Sbjct: 521 SPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSP-YSPTSPNYS 579
Query: 476 PSSPYSSGASPDYSPSAGYSPTLPGYSPSST 384
P+SP S SP YSPS+ P YSPS T
Sbjct: 580 PTSPSYSPTSPSYSPSS------PTYSPSRT 604
[91][TOP]
>UniRef100_Q30BD9 DNA-directed RNA polymerase n=1 Tax=Glaucocystis nostochinearum
RepID=Q30BD9_9EUKA
Length = 1852
Score = 109 bits (273), Expect = 2e-22
Identities = 55/78 (70%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1662 SPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSY 1721
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S YSPT P YSPSS
Sbjct: 1722 SPTSPSYSPTSPSYSPSS 1739
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSP YSPTSPSYSP+SP YSP+SP S SP Y
Sbjct: 1599 SPSYSPTSPSYSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSY 1658
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S GYSPT P YSP+S Y+P
Sbjct: 1659 SPTSPGYSPTSPSYSPTSP-SYSP 1681
Score = 108 bits (271), Expect = 3e-22
Identities = 57/84 (67%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+ SPTSPSYSPTSPSYSP+SP+YSPSSP S ASP Y
Sbjct: 1690 SPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPSSPSCSPASPTY 1749
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSP+ P YSPSS Y+P
Sbjct: 1750 SPSSPSYSPSSPSYSPSSP-SYSP 1772
Score = 105 bits (261), Expect = 4e-21
Identities = 56/91 (61%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSP++ R SP SP YSPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1634 SPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1693
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P SP+S Y+P
Sbjct: 1694 SPTSPSYSPTSPSYSPTSPSCSPTSP-SYSP 1723
Score = 104 bits (259), Expect = 7e-21
Identities = 56/91 (61%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YS ++ R SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP
Sbjct: 1564 SPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSY 1623
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1624 SPTSPGYSPTSPSYSPTSPRYSPTSP-SYSP 1653
Score = 101 bits (251), Expect = 6e-20
Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYS 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSP+SPS YSPSSP+YSPSSP
Sbjct: 1704 SPSYSPTSPSCSPTSPSYSPTSPSYSPTSPSYSPSSPSCSPASPTYSPSSPSYSPSSPSY 1763
Query: 458 SGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
S +SP YSPS+ YSP+ P Y+P+S Y+P
Sbjct: 1764 SPSSPSYSPSSPSYSPSSPQYTPAS-ANYSP 1793
Score = 99.4 bits (246), Expect = 2e-19
Identities = 56/91 (61%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY----SSG- 453
S +YSP++ SP SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP S G
Sbjct: 1606 SPSYSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGY 1665
Query: 452 --ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S YSPT P YSP+S Y+P
Sbjct: 1666 SPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1695
Score = 97.1 bits (240), Expect = 1e-18
Identities = 53/95 (55%), Positives = 64/95 (67%), Gaps = 13/95 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSS--- 468
S +YSPS+ SPASP YSP+SP+YSP+SPSYSP+SPSYSPSSP Y+P+S
Sbjct: 1732 SPSYSPSSPSCSPASPTYSPSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPQYTPASANY 1791
Query: 467 --PYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
P +SP YSP++ YSPT P Y SS YTP
Sbjct: 1792 SPPSPLHSSPAYSPTSQYSPTSPAYGASSPA-YTP 1825
Score = 96.7 bits (239), Expect = 1e-18
Identities = 53/86 (61%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
SP Y+ S + SPASP YS SP YSPTSP YS +SPSYSP+SP+YSP+SP S SP
Sbjct: 1549 SPGFDYAASPS-YSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSP 1607
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S G Y+P
Sbjct: 1608 SYSPTSPAYSPTSPSYSPTSPG-YSP 1632
Score = 83.6 bits (205), Expect = 1e-14
Identities = 46/80 (57%), Positives = 52/80 (65%), Gaps = 9/80 (11%)
Frame = -1
Query: 581 SPASPYSPTSPNYSP--------TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-S 429
SP YSP+SP YSP SPSYSP SPSYS +SP YSP+SP S +SP YSP S
Sbjct: 1533 SPHRGYSPSSPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPSYSPTS 1592
Query: 428 AGYSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 1593 PSYSPTSPSYSPTSP-SYSP 1611
Score = 70.5 bits (171), Expect = 1e-10
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP+SP Y+P S NYSP SP +S SP+YSP+S YSP+SP +SP Y
Sbjct: 1767 SPSYSPSSPSYSPSSPQYTPASANYSPPSPLHS--SPAYSPTS-QYSPTSPAYGASSPAY 1823
Query: 437 SPSAGYSP-TLPGYSPSSTGQYTPHEGDK 354
+P + SP +LP + S Q +P + K
Sbjct: 1824 TPQSNLSPASLPSPALSPVSQKSPPQDRK 1852
Score = 55.5 bits (132), Expect = 4e-06
Identities = 40/94 (42%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSP-TSPSYSPTSPSYSPSSPTYSPSSP-YSSGAS 447
+P++ SP + +SP + SP S+SP YSPSSP YSP SP + AS
Sbjct: 1501 TPALQQSPGGTPFLDGATFSPYAE--SPFVDGSFSPHR-GYSPSSPPYSPRSPGFDYAAS 1557
Query: 446 PDYSP--------SAGYSPTLPGYSPSSTGQYTP 369
P YSP S YSPT PGYS SS Y+P
Sbjct: 1558 PSYSPASPSYSAASPRYSPTSPGYSASSP-SYSP 1590
[92][TOP]
>UniRef100_O96446 DNA-directed RNA polymerase n=1 Tax=Vairimorpha necatrix
RepID=O96446_9MICR
Length = 1605
Score = 109 bits (273), Expect = 2e-22
Identities = 60/113 (53%), Positives = 72/113 (63%), Gaps = 15/113 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1492 SPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1551
Query: 437 SP-SAGYSPTLPGYSPSS-------------TGQYTPHEGDKKDKTGKKDASK 321
SP S YSPT P YSP+S + Y+P + + KT +K K
Sbjct: 1552 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTYDNDEKKTNRKRKGK 1604
Score = 106 bits (264), Expect = 2e-21
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP+YSP+SP S SP Y
Sbjct: 1471 SPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSY 1530
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1531 SPTSPSYSPTSPSYSPTSP-SYSP 1553
Score = 99.4 bits (246), Expect = 2e-19
Identities = 53/84 (63%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSP-ASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AY R +P S YSPTSP YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP Y
Sbjct: 1450 SPAYLVEGNRYAPKTSLYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPTY 1509
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1510 SPTSPSYSPTSPSYSPTSP-SYSP 1532
[93][TOP]
>UniRef100_C5E245 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5E245_LACTC
Length = 1740
Score = 109 bits (273), Expect = 2e-22
Identities = 60/118 (50%), Positives = 73/118 (61%), Gaps = 15/118 (12%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1618 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1677
Query: 437 SP-SAGYSPTLPGYSPSS-------------TGQYTPHEGDKKDKTGKKDASKDDKGN 306
SP S YSPT P YSP+S + Y+P + KK+ D+ N
Sbjct: 1678 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGSPSYSPGSPKKENDNDNNNN 1735
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1555 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1614
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1615 SPTSPSYSPTSPSYSPTSP-SYSP 1637
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1576 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1635
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1636 SPTSPSYSPTSPSYSPTSP-SYSP 1658
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1597 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1656
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1657 SPTSPSYSPTSPSYSPTSP-SYSP 1679
Score = 102 bits (253), Expect = 3e-20
Identities = 52/73 (71%), Positives = 58/73 (79%), Gaps = 2/73 (2%)
Frame = -1
Query: 581 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 408
SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT
Sbjct: 1545 SPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1604
Query: 407 PGYSPSSTGQYTP 369
P YSP+S Y+P
Sbjct: 1605 PSYSPTSP-SYSP 1616
Score = 98.2 bits (243), Expect = 5e-19
Identities = 58/109 (53%), Positives = 70/109 (64%), Gaps = 6/109 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP
Sbjct: 1639 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP----T 1694
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGN 306
SP YSP S YSPT P YSP S Y+P G K + + + ++ N
Sbjct: 1695 SPSYSPTSPSYSPTSPSYSPGSP-SYSP--GSPKKENDNDNNNNNNNNN 1740
Score = 96.7 bits (239), Expect = 1e-18
Identities = 50/71 (70%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
Frame = -1
Query: 575 ASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPG 402
ASP +SPTSP YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1540 ASPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1599
Query: 401 YSPSSTGQYTP 369
YSP+S Y+P
Sbjct: 1600 YSPTSP-SYSP 1609
[94][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
discoideum RepID=RPB1_DICDI
Length = 1727
Score = 109 bits (273), Expect = 2e-22
Identities = 56/84 (66%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1627 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1686
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSP+ P YSPSS Y+P
Sbjct: 1687 SPSSPSYSPSSPSYSPSSP-SYSP 1709
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1585 SPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1644
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1645 SPTSPSYSPTSPSYSPTSP-SYSP 1667
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1606 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1665
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1666 SPTSPSYSPTSPSYSPTSP-SYSP 1688
Score = 108 bits (269), Expect = 5e-22
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP Y
Sbjct: 1557 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSY 1616
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1617 SPTSPSYSPTSPSYSPTSP-SYSP 1639
Score = 100 bits (248), Expect = 1e-19
Identities = 59/95 (62%), Positives = 65/95 (68%), Gaps = 11/95 (11%)
Frame = -1
Query: 620 SPSIAYSPS-NARLS--------PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 471
SPS SP NA S P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+
Sbjct: 1525 SPSAMNSPGYNANKSYGSSYQYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1584
Query: 470 SPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1585 SPSYSPTSPSYSPTSPFYSPTSPSYSPTSP-SYSP 1618
Score = 100 bits (248), Expect = 1e-19
Identities = 53/89 (59%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSPSSP+YSPSSP S +SP Y
Sbjct: 1648 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPSY 1707
Query: 437 SPSAGYSPTLPGYSPSSTGQYTPHEGDKK 351
SPS SP+ T +Y +KK
Sbjct: 1708 SPS----------SPTFTNKYNYQPNNKK 1726
[95][TOP]
>UniRef100_P16356 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
elegans RepID=RPB1_CAEEL
Length = 1852
Score = 109 bits (273), Expect = 2e-22
Identities = 57/84 (67%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSPSSP S +SP Y
Sbjct: 1609 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSY 1668
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSP+S Y+P
Sbjct: 1669 SPSSPRYSPTSPTYSPTSP-TYSP 1691
Score = 108 bits (269), Expect = 5e-22
Identities = 59/90 (65%), Positives = 70/90 (77%), Gaps = 8/90 (8%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YSSG---- 453
S +YSPS+ SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SPTYSP+SP Y SG
Sbjct: 1658 SPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYS 1717
Query: 452 -ASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
+SP YSPS+ YSPT P YSP+S QY+P
Sbjct: 1718 PSSPKYSPSSPTYSPTSPSYSPTSP-QYSP 1746
Score = 107 bits (268), Expect = 6e-22
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP+SP YSP+SP YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP Y
Sbjct: 1651 SPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSY 1710
Query: 437 SPSAGYSPTLPGYSPSSTGQYTP 369
GYSP+ P YSPSS Y+P
Sbjct: 1711 ESGGGYSPSSPKYSPSSP-TYSP 1732
Score = 104 bits (260), Expect = 5e-21
Identities = 56/89 (62%), Positives = 65/89 (73%), Gaps = 7/89 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSP+SPSYSP+SPSYSPSSP YSP+SP S SP Y
Sbjct: 1630 SPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTY 1689
Query: 437 SP-SAGYSPTLPGYSPSST-----GQYTP 369
SP S YSPT P YSP+S G Y+P
Sbjct: 1690 SPTSPTYSPTSPTYSPTSPSYESGGGYSP 1718
Score = 104 bits (260), Expect = 5e-21
Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 8/87 (9%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG------AS 447
YSPS+ + SP+SP YSPTSP+YSPTSP YSPTSP YSPSSPTY+PSSP + +S
Sbjct: 1716 YSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSS 1775
Query: 446 PDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P YSP S YSPT P Y+PSS QY+P
Sbjct: 1776 PQYSPTSPTYSPTSPSYTPSSP-QYSP 1801
Score = 102 bits (254), Expect = 3e-20
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 426
SPS + SPA+ SP SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1593 SPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1652
Query: 425 GYSPTLPGYSPSSTGQYTP 369
YSP+ P YSPSS Y+P
Sbjct: 1653 SYSPSSPSYSPSSP-SYSP 1670
Score = 101 bits (252), Expect = 4e-20
Identities = 58/95 (61%), Positives = 66/95 (69%), Gaps = 11/95 (11%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSP---------SYSPTSPSYSPSSPTYSPS 471
SP + YSPS+ + S SP YSPTSP+YSPTSP SYSPTSPSYSP+SP+YSP+
Sbjct: 1571 SPGV-YSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPT 1629
Query: 470 SPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP S SP YSP S YSPT P YSPSS Y+P
Sbjct: 1630 SPSYSPTSPSYSPTSPSYSPTSPSYSPSSP-SYSP 1663
Score = 96.7 bits (239), Expect = 1e-18
Identities = 53/92 (57%), Positives = 61/92 (66%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
SP+ S SP+SP YSP+SP YSPTSPSYSPTSP YSP+SP YSPSSP + +SP
Sbjct: 1704 SPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSP 1763
Query: 443 DYSP-------SAGYSPTLPGYSPSSTGQYTP 369
Y+P S YSPT P YSP+S YTP
Sbjct: 1764 TYNPTSPRGFSSPQYSPTSPTYSPTSP-SYTP 1794
Score = 93.6 bits (231), Expect = 1e-17
Identities = 51/94 (54%), Positives = 64/94 (68%), Gaps = 15/94 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSP------SYSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSP++ + SP+SP Y+P+SP Y+PTSP YSPTSP+YSP+SP+Y+PSSP S S
Sbjct: 1744 YSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTS 1803
Query: 446 PDYSP--------SAGYSPTLPGYSPSSTGQYTP 369
P Y+P SA YSPT P YSPSS Y+P
Sbjct: 1804 PTYTPSPSEQPGTSAQYSPTSPTYSPSSP-TYSP 1836
Score = 93.2 bits (230), Expect = 2e-17
Identities = 49/90 (54%), Positives = 59/90 (65%), Gaps = 8/90 (8%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSS 456
S Y+PS+ +P SP YSPTSP YSPTSPSY+P+SP YSP+SPTY+PS
Sbjct: 1755 SPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQP 1814
Query: 455 GASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
G S YSP S YSP+ P YSP+S Y+P
Sbjct: 1815 GTSAQYSPTSPTYSPSSPTYSPASP-SYSP 1843
Score = 92.8 bits (229), Expect = 2e-17
Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 13/95 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNY------SPTSPSYSPTSPSYSPSSPTYSPSSPYSS 456
S YSP++ SP SP YSPTSP+Y SP+SP YSP+SP+YSP+SP+YSP+SP S
Sbjct: 1686 SPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYS 1745
Query: 455 GASPDYSPSA-GYSPTLPGYSPS-----STGQYTP 369
SP YSPS+ Y+P+ P Y+P+ S+ QY+P
Sbjct: 1746 PTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSP 1780
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/81 (55%), Positives = 54/81 (66%), Gaps = 8/81 (9%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------TSPSYSPSSPTYSPSSPYSSGA 450
YSP++ SP SP Y+P+SP YSPTSP+Y+P TS YSP+SPTYSPSSP S A
Sbjct: 1778 YSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSPSSPTYSPA 1837
Query: 449 SPDYSPSAGYSPTLPGYSPSS 387
SP YSPS+ P Y P+S
Sbjct: 1838 SPSYSPSS------PTYDPNS 1852
Score = 75.5 bits (184), Expect = 3e-12
Identities = 52/142 (36%), Positives = 63/142 (44%), Gaps = 62/142 (43%)
Frame = -1
Query: 608 AYSPSNARLSPASPYSP------------------------------------------- 558
A+SP+ +SP + +SP
Sbjct: 1516 AWSPTTGGMSPGAGFSPAGNTDGGASPFNEGGWSPASPGDPLGALSPRTPSYGGMSPGVY 1575
Query: 557 ---------TSPNYSPTSPSYSPT---------SPSYSPSSPTYSPSSPYSSGASPDYSP 432
TSP+YSPTSPSYSPT SPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1576 SPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSP 1635
Query: 431 -SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1636 TSPSYSPTSPSYSPTSP-SYSP 1656
Score = 56.6 bits (135), Expect = 2e-06
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
Frame = -1
Query: 620 SPSIAYSPS-----NARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSS 489
SP+ SPS +A+ SP SP YSP+SP YSP SPSYSP+SP+Y P+S
Sbjct: 1803 SPTYTPSPSEQPGTSAQYSPTSPTYSPSSPTYSPASPSYSPSSPTYDPNS 1852
[96][TOP]
>UniRef100_UPI000186501C hypothetical protein BRAFLDRAFT_115025 n=1 Tax=Branchiostoma floridae
RepID=UPI000186501C
Length = 1956
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1713
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1714 SPTSPSYSPTSPSYSPTSP-SYSP 1736
Score = 108 bits (271), Expect = 3e-22
Identities = 56/84 (66%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSP SPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1612 SPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1671
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1672 SPTSPSYSPTSPSYSPTSP-SYSP 1694
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSP-SYSP 1715
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1675 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1734
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 1735 SPTSPSYSPTSPNYTPTSP-KYSP 1757
Score = 108 bits (269), Expect = 5e-22
Identities = 55/84 (65%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSPNY+PTSP YSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1724 SPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSY 1783
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSP P YSPSS Y+P
Sbjct: 1784 SPSSPNYSPQSPSYSPSSP-SYSP 1806
Score = 107 bits (268), Expect = 6e-22
Identities = 55/84 (65%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP + SP Y
Sbjct: 1696 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKY 1755
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1756 SPTSPSYSPTSPSYSPASP-SYSP 1778
Score = 105 bits (261), Expect = 4e-21
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 7/86 (8%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
Y+P++ + SP SP YSPTSP+YSP SPSYSPTSPSYSPSSP YSP SP S +SP YSPS
Sbjct: 1748 YTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQSPSYSPSSPSYSPS 1807
Query: 428 A------GYSPTLPGYSPSSTGQYTP 369
+ Y+PT P YSPSS +Y+P
Sbjct: 1808 SPNPSSPKYTPTSPKYSPSSP-KYSP 1832
Score = 102 bits (253), Expect = 3e-20
Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 5/93 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS + +P SP YSP SP Y+PTSP YSPTSPSY+P +P YSP+SP S SP Y
Sbjct: 1855 SPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTY 1914
Query: 437 SPS----AGYSPTLPGYSPSSTGQYTPHEGDKK 351
SP+ + YSPT PGYSP+S Y+P + +
Sbjct: 1915 SPTSPKGSTYSPTTPGYSPASP-TYSPESPESR 1946
Score = 101 bits (251), Expect = 6e-20
Identities = 54/89 (60%), Positives = 63/89 (70%), Gaps = 7/89 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 453
S +YSPS+ SP+SP Y+PTSP YSP+SP YSP+SP YSP+SPTYSPSS S
Sbjct: 1794 SPSYSPSSPSYSPSSPNPSSPKYTPTSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSP 1853
Query: 452 ASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
ASP YSPS Y+PT P YSP+S YTP
Sbjct: 1854 ASPSYSPSTPKYTPTSPKYSPASP-TYTP 1881
Score = 99.4 bits (246), Expect = 2e-19
Identities = 52/85 (61%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP +P SP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1590 SPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPS 1649
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSP-SYSP 1673
Score = 97.4 bits (241), Expect = 8e-19
Identities = 58/110 (52%), Positives = 70/110 (63%), Gaps = 6/110 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S +YSP++ SP SP Y+PTSP YSPTSPSYSPTSPSYSP+SP+YSP SP +
Sbjct: 1731 SPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSP----S 1786
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
SP+YSP S YSP+ P YSPSS +P K T K + K +P
Sbjct: 1787 SPNYSPQSPSYSPSSPSYSPSSPNPSSP----KYTPTSPKYSPSSPKYSP 1832
Score = 95.5 bits (236), Expect = 3e-18
Identities = 48/88 (54%), Positives = 61/88 (69%), Gaps = 9/88 (10%)
Frame = -1
Query: 605 YSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA 450
YSPS+ + SP SP YSP SP+YSP++P Y+PTSP YSP+SPTY+P+SP S
Sbjct: 1830 YSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPT 1889
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P + YSPT P YSP+S Y+P
Sbjct: 1890 SPSYTPDTPKYSPTSPKYSPTSP-TYSP 1916
Score = 92.0 bits (227), Expect = 3e-17
Identities = 58/110 (52%), Positives = 67/110 (60%), Gaps = 28/110 (25%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP------------ 474
S +YSP++ SPASP YSPTSP+YSP+SP+YSP SPSYSPSSP+YSP
Sbjct: 1759 SPSYSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQSPSYSPSSPSYSPSSPNPSSPKYTP 1818
Query: 473 -------SSPYSSGASPDYSP--------SAGYSPTLPGYSPSSTGQYTP 369
SSP S +SP YSP SA YSP P YSP ST +YTP
Sbjct: 1819 TSPKYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSP-STPKYTP 1867
Score = 91.7 bits (226), Expect = 5e-17
Identities = 52/100 (52%), Positives = 63/100 (63%), Gaps = 9/100 (9%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSY-------SPTSPSYSPSSPTYSPSS 468
SPS Y+P++ + SPASP Y+PTSP YSPTSPSY SPTSP YSP+SPTYSP+S
Sbjct: 1859 SPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPTS 1918
Query: 467 PYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTPHEGDKKD 348
P S SP + GYSP P YSP S E ++ +
Sbjct: 1919 PKGSTYSP---TTPGYSPASPTYSPESPESRATQEEEEDE 1955
Score = 84.3 bits (207), Expect = 7e-15
Identities = 53/106 (50%), Positives = 62/106 (58%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPTSPS---------------YSPTSPS 504
S A+SP S PASPY P+ SP+YSP SP+ YSPTSPS
Sbjct: 1562 SPAWSPTPGSPGSPGPASPYIPSPGGPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPS 1621
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1622 YSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
Score = 56.6 bits (135), Expect = 2e-06
Identities = 40/122 (32%), Positives = 54/122 (44%), Gaps = 44/122 (36%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPSYSPT------------------------------ 513
+P A SP++ + + + SP++SPT
Sbjct: 1539 TPGAAGFSPSAASDASGMSPAGYSPAWSPTPGSPGSPGPASPYIPSPGGPMSPSYSPASP 1598
Query: 512 -------------SPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQY 375
SP YSP+SP+YSP+SP S ASP+YSP S YSPT P YSP+S Y
Sbjct: 1599 AYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSP-SY 1657
Query: 374 TP 369
+P
Sbjct: 1658 SP 1659
[97][TOP]
>UniRef100_UPI000151A8B3 hypothetical protein PGUG_01105 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B3
Length = 1018
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 823 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 882
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 883 SPTSPSYSPTSPSYSPTSP-SYSP 905
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 830 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 889
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 890 SPTSPSYSPTSPSYSPTSP-SYSP 912
Score = 100 bits (248), Expect = 1e-19
Identities = 53/84 (63%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AY ++ SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 802 SPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 861
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 862 SPTSPSYSPTSPSYSPTSP-SYSP 884
Score = 99.4 bits (246), Expect = 2e-19
Identities = 50/77 (64%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 844 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 903
Query: 437 SP-SAGYSPTLPGYSPS 390
SP S YSPT P+
Sbjct: 904 SPTSPSYSPTFAKLQPN 920
Score = 82.4 bits (202), Expect = 3e-14
Identities = 45/83 (54%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = -1
Query: 608 AYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
AY SP SP Y TSP Y SP Y TSP+YSP+SP+YSP+SP S SP YS
Sbjct: 782 AYGGQPGSPSPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYS 841
Query: 434 P-SAGYSPTLPGYSPSSTGQYTP 369
P S YSPT P YSP+S Y+P
Sbjct: 842 PTSPSYSPTSPSYSPTSP-SYSP 863
Score = 67.4 bits (163), Expect = 9e-10
Identities = 37/65 (56%), Positives = 44/65 (67%), Gaps = 5/65 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYS----PSSPTYSPSSPYSSGA 450
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYS SPT SP +
Sbjct: 858 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTFAKL 917
Query: 449 SPDYS 435
P++S
Sbjct: 918 QPNFS 922
[98][TOP]
>UniRef100_UPI0000E48673 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48673
Length = 1880
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1602 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1661
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1662 SPTSPSYSPTSPSYSPTSP-SYSP 1684
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1623 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1682
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1683 SPTSPSYSPTSPSYSPTSP-SYSP 1705
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1658 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1717
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSP+S Y+P
Sbjct: 1718 SPSSPKYSPTSPSYSPTSP-SYSP 1740
Score = 108 bits (271), Expect = 3e-22
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1581 SPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1640
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1641 SPTSPSYSPTSPSYSPTSP-SYSP 1663
Score = 108 bits (270), Expect = 4e-22
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSPSSP YSP+SP S SP Y
Sbjct: 1679 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSY 1738
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSP P YSPSS +Y+P
Sbjct: 1739 SPQSPSYSPGSPSYSPSSP-KYSP 1761
Score = 108 bits (270), Expect = 4e-22
Identities = 56/84 (66%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP + SP+SP YSPTSP+YSPTSPSYSPTSP++SPSSPTYSP+SP S SP Y
Sbjct: 1742 SPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKY 1801
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSP+S +Y+P
Sbjct: 1802 SPSSPKYSPTSPTYSPTSP-KYSP 1824
Score = 107 bits (267), Expect = 8e-22
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP+SP YSPTSP+YSPTSPSYSP SPSYSP SP+YSPSSP S SP Y
Sbjct: 1707 SPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSY 1766
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P +SPSS Y+P
Sbjct: 1767 SPTSPSYSPTSPNFSPSSP-TYSP 1789
Score = 103 bits (257), Expect = 1e-20
Identities = 53/87 (60%), Positives = 64/87 (73%), Gaps = 5/87 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSP+SP YSPTSP+YSPTSP YSP+SPTYSP+SP S +SP Y
Sbjct: 1784 SPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTY 1843
Query: 437 SPS----AGYSPTLPGYSPSSTGQYTP 369
SP+ + YSPT P YSP+S Y+P
Sbjct: 1844 SPTSPKGSTYSPTSPSYSPTSP-SYSP 1869
Score = 102 bits (253), Expect = 3e-20
Identities = 53/76 (69%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSPS+ + SP SP YSPTSP YSP SP+YSPTSP YSPSSPTYSP+SP S SP SPS
Sbjct: 1801 YSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPT-SPS 1859
Query: 428 AGYSPTLPGYSPSSTG 381
YSPT P YSP+S G
Sbjct: 1860 --YSPTSPSYSPTSPG 1873
Score = 101 bits (252), Expect = 4e-20
Identities = 55/85 (64%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SPS YSP+ SP+ YSPTSP YSP SPSYSPTSPSYSP+SP+YSP+SP S SP
Sbjct: 1565 SPSPGYSPT----SPS--YSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1618
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1619 YSPTSPSYSPTSPSYSPTSP-SYSP 1642
Score = 101 bits (252), Expect = 4e-20
Identities = 54/84 (64%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP +SP+SP YSP SPSYSPTSP YSPSSP YSP+SP S SP Y
Sbjct: 1763 SPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKY 1822
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS Y+P
Sbjct: 1823 SPASPTYSPTSPKYSPSSP-TYSP 1845
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/91 (62%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1630 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1689
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1690 SPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1719
Score = 97.1 bits (240), Expect = 1e-18
Identities = 55/88 (62%), Positives = 61/88 (69%), Gaps = 6/88 (6%)
Frame = -1
Query: 614 SIAYSP--SNARLSPASPY---SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA 450
S AYSP S SP SP SPTSP+YSPTSP YSP SPSYSP+SP+YSP+SP S
Sbjct: 1549 SPAYSPAWSPQPQSPGSPSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPT 1608
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S YSPT P YSP+S Y+P
Sbjct: 1609 SPSYSPTSPSYSPTSPSYSPTSP-SYSP 1635
Score = 93.6 bits (231), Expect = 1e-17
Identities = 56/98 (57%), Positives = 66/98 (67%), Gaps = 16/98 (16%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYS--------------PSSPTY 480
S +YSPS+ + SP SP YSPTSP+YSP SPSYSP SPSYS P+SP+Y
Sbjct: 1714 SPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSY 1773
Query: 479 SPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP+SP S +SP YSP S YSPT P YSPSS +Y+P
Sbjct: 1774 SPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSP-KYSP 1810
Score = 81.6 bits (200), Expect = 5e-14
Identities = 46/85 (54%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S +SP+ + P SP SP SP YSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1543 SESTGFSPAYSPAWSPQPQSPGSP-----SPGYSPTSPSYSPTSPGYSPASPSYSPTSPS 1597
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1598 YSPTSPSYSPTSPSYSPTSP-SYSP 1621
Score = 73.2 bits (178), Expect = 2e-11
Identities = 37/61 (60%), Positives = 45/61 (73%), Gaps = 11/61 (18%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSS 468
S YSP++ + SPASP YSP+SP YSPTSP +YSPTSPSYSP+SP+YSP+S
Sbjct: 1812 SPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTYSPTSPSYSPTSPSYSPTS 1871
Query: 467 P 465
P
Sbjct: 1872 P 1872
[99][TOP]
>UniRef100_C3ZES3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3ZES3_BRAFL
Length = 1934
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1654 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1713
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1714 SPTSPSYSPTSPSYSPTSP-SYSP 1736
Score = 108 bits (271), Expect = 3e-22
Identities = 56/84 (66%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSP SPNYSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1612 SPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1671
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1672 SPTSPSYSPTSPSYSPTSP-SYSP 1694
Score = 108 bits (270), Expect = 4e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP
Sbjct: 1636 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSP-SYSP 1715
Score = 108 bits (270), Expect = 4e-22
Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1675 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1734
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 1735 SPTSPSYSPTSPNYTPTSP-KYSP 1757
Score = 107 bits (268), Expect = 6e-22
Identities = 55/84 (65%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP + SP Y
Sbjct: 1696 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKY 1755
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1756 SPTSPSYSPTSPSYSPASP-SYSP 1778
Score = 102 bits (253), Expect = 3e-20
Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 5/93 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS + +P SP YSP SP Y+PTSP YSPTSPSY+P +P YSP+SP S SP Y
Sbjct: 1833 SPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTY 1892
Query: 437 SPS----AGYSPTLPGYSPSSTGQYTPHEGDKK 351
SP+ + YSPT PGYSP+S Y+P + +
Sbjct: 1893 SPTSPKGSTYSPTTPGYSPASP-TYSPESPESR 1924
Score = 99.4 bits (246), Expect = 2e-19
Identities = 52/85 (61%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S +YSP++ P SP +P SP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1590 SPSYSPASPAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPS 1649
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1650 YSPTSPSYSPTSPSYSPTSP-SYSP 1673
Score = 97.8 bits (242), Expect = 6e-19
Identities = 53/102 (51%), Positives = 66/102 (64%), Gaps = 20/102 (19%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSP+Y+PTSP YSP+SP+YSP+SP S ASP Y
Sbjct: 1717 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSY 1776
Query: 437 SPS-------------------AGYSPTLPGYSPSSTGQYTP 369
SP+ YSP+ P YSPSS +Y+P
Sbjct: 1777 SPTILSNLTQLQPHLTPVHSHVTQYSPSSPKYSPSSP-KYSP 1817
Score = 95.5 bits (236), Expect = 3e-18
Identities = 48/88 (54%), Positives = 61/88 (69%), Gaps = 9/88 (10%)
Frame = -1
Query: 605 YSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA 450
YSPS+ + SP SP YSP SP+YSP++P Y+PTSP YSP+SPTY+P+SP S
Sbjct: 1808 YSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPT 1867
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P + YSPT P YSP+S Y+P
Sbjct: 1868 SPSYTPDTPKYSPTSPKYSPTSP-TYSP 1894
Score = 93.6 bits (231), Expect = 1e-17
Identities = 54/92 (58%), Positives = 61/92 (66%), Gaps = 9/92 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP Y+P SP
Sbjct: 1703 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSP----T 1758
Query: 449 SPDYSP-SAGYSPTLPGYSP---SSTGQYTPH 366
SP YSP S YSP P YSP S+ Q PH
Sbjct: 1759 SPSYSPTSPSYSPASPSYSPTILSNLTQLQPH 1790
Score = 91.7 bits (226), Expect = 5e-17
Identities = 52/100 (52%), Positives = 63/100 (63%), Gaps = 9/100 (9%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSY-------SPTSPSYSPSSPTYSPSS 468
SPS Y+P++ + SPASP Y+PTSP YSPTSPSY SPTSP YSP+SPTYSP+S
Sbjct: 1837 SPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPTSPTYSPTS 1896
Query: 467 PYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTPHEGDKKD 348
P S SP + GYSP P YSP S E ++ +
Sbjct: 1897 PKGSTYSP---TTPGYSPASPTYSPESPESRATQEEEEDE 1933
Score = 86.7 bits (213), Expect = 1e-15
Identities = 53/116 (45%), Positives = 64/116 (55%), Gaps = 34/116 (29%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------------------------YSPTSPNYSPTSPSYSPT 513
S +YSP++ SPASP YSP+SP YSP+SP YSPT
Sbjct: 1759 SPSYSPTSPSYSPASPSYSPTILSNLTQLQPHLTPVHSHVTQYSPSSPKYSPSSPKYSPT 1818
Query: 512 SPSYSPS-------SPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP+YSPS SP+YSPS+P + SP YSP S Y+PT P YSP+S YTP
Sbjct: 1819 SPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSP-SYTP 1873
Score = 84.3 bits (207), Expect = 7e-15
Identities = 53/106 (50%), Positives = 62/106 (58%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPTSPS---------------YSPTSPS 504
S A+SP S PASPY P+ SP+YSP SP+ YSPTSPS
Sbjct: 1562 SPAWSPTPGSPGSPGPASPYIPSPGGPMSPSYSPASPAYMPRSPGGMTPQSPGYSPTSPS 1621
Query: 503 YSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1622 YSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1666
Score = 83.2 bits (204), Expect = 2e-14
Identities = 56/123 (45%), Positives = 64/123 (52%), Gaps = 41/123 (33%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYS-------------------- 498
S +YSP++ +P SP YSPTSP+YSPTSPSYSP SPSYS
Sbjct: 1738 SPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTILSNLTQLQPHLTPVHSH 1797
Query: 497 -------------------PSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQ 378
P+SPTYSPSS S ASP YSPS Y+PT P YSP+S
Sbjct: 1798 VTQYSPSSPKYSPSSPKYSPTSPTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASP-T 1856
Query: 377 YTP 369
YTP
Sbjct: 1857 YTP 1859
Score = 56.6 bits (135), Expect = 2e-06
Identities = 40/122 (32%), Positives = 54/122 (44%), Gaps = 44/122 (36%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPSYSPT------------------------------ 513
+P A SP++ + + + SP++SPT
Sbjct: 1539 TPGAAGFSPSAASDASGMSPAGYSPAWSPTPGSPGSPGPASPYIPSPGGPMSPSYSPASP 1598
Query: 512 -------------SPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQY 375
SP YSP+SP+YSP+SP S ASP+YSP S YSPT P YSP+S Y
Sbjct: 1599 AYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSP-SY 1657
Query: 374 TP 369
+P
Sbjct: 1658 SP 1659
[100][TOP]
>UniRef100_C8Z6G2 Rpo21p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8Z6G2_YEAST
Length = 1733
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1560 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1619
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1620 SPTSPSYSPTSPSYSPTSP-SYSP 1642
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1581 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1640
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1641 SPTSPSYSPTSPSYSPTSPA-YSP 1663
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1609 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSY 1668
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1669 SPTSPSYSPTSPSYSPTSP-SYSP 1691
Score = 107 bits (267), Expect = 8e-22
Identities = 55/84 (65%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +SP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1539 SPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1598
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1599 SPTSPSYSPTSPSYSPTSP-SYSP 1621
Score = 107 bits (266), Expect = 1e-21
Identities = 54/81 (66%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1644 SPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSY 1703
Query: 437 SP-SAGYSPTLPGYSPSSTGQ 378
SP S GYSP P YSP Q
Sbjct: 1704 SPTSPGYSPGSPAYSPKQDEQ 1724
Score = 99.4 bits (246), Expect = 2e-19
Identities = 59/110 (53%), Positives = 69/110 (62%), Gaps = 22/110 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP SP S
Sbjct: 1616 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSY 1675
Query: 458 SGASPDYSP--------SAGYSPTLPGYSPSSTG------QYTPHEGDKK 351
S SP YSP S YSPT P YSP+S G Y+P + ++K
Sbjct: 1676 SPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQK 1725
Score = 88.6 bits (218), Expect = 4e-16
Identities = 44/73 (60%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Frame = -1
Query: 581 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 408
+P SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP S YSPT
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588
Query: 407 PGYSPSSTGQYTP 369
P YSP+S Y+P
Sbjct: 1589 PSYSPTSP-SYSP 1600
[101][TOP]
>UniRef100_C7GKZ2 Rpo21p n=2 Tax=Saccharomyces cerevisiae RepID=C7GKZ2_YEAS2
Length = 1733
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1560 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1619
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1620 SPTSPSYSPTSPSYSPTSP-SYSP 1642
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1581 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1640
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1641 SPTSPSYSPTSPSYSPTSPA-YSP 1663
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1609 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSY 1668
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1669 SPTSPSYSPTSPSYSPTSP-SYSP 1691
Score = 107 bits (267), Expect = 8e-22
Identities = 55/84 (65%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +SP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1539 SPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1598
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1599 SPTSPSYSPTSPSYSPTSP-SYSP 1621
Score = 107 bits (266), Expect = 1e-21
Identities = 54/81 (66%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1644 SPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSY 1703
Query: 437 SP-SAGYSPTLPGYSPSSTGQ 378
SP S GYSP P YSP Q
Sbjct: 1704 SPTSPGYSPGSPAYSPKQDEQ 1724
Score = 99.4 bits (246), Expect = 2e-19
Identities = 59/110 (53%), Positives = 69/110 (62%), Gaps = 22/110 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP SP S
Sbjct: 1616 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSY 1675
Query: 458 SGASPDYSP--------SAGYSPTLPGYSPSSTG------QYTPHEGDKK 351
S SP YSP S YSPT P YSP+S G Y+P + ++K
Sbjct: 1676 SPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQK 1725
Score = 88.6 bits (218), Expect = 4e-16
Identities = 44/73 (60%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Frame = -1
Query: 581 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 408
+P SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP S YSPT
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588
Query: 407 PGYSPSSTGQYTP 369
P YSP+S Y+P
Sbjct: 1589 PSYSPTSP-SYSP 1600
[102][TOP]
>UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JYP8_SCHJY
Length = 1748
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1566 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1625
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1626 SPTSPSYSPTSPSYSPTSP-SYSP 1648
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1587 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1646
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1647 SPTSPSYSPTSPSYSPTSP-SYSP 1669
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1608 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1667
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1668 SPTSPSYSPTSPSYSPTSP-SYSP 1690
Score = 108 bits (271), Expect = 3e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +SPS+ SP+SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1545 SPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1604
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1605 SPTSPSYSPTSPSYSPTSP-SYSP 1627
Score = 108 bits (270), Expect = 4e-22
Identities = 54/81 (66%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1629 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1688
Query: 437 SP-SAGYSPTLPGYSPSSTGQ 378
SP S YSPT P YSP + Q
Sbjct: 1689 SPTSPSYSPTSPSYSPGHSAQ 1709
Score = 104 bits (259), Expect = 7e-21
Identities = 57/106 (53%), Positives = 68/106 (64%), Gaps = 22/106 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1643 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1702
Query: 437 SP---------------------SAGYSPTLPGYSPSSTGQYTPHE 363
SP S YSPT P YSP+S +Y+P+E
Sbjct: 1703 SPGHSAQNAQGRMSPRSPVYSPTSPSYSPTSPSYSPTSP-RYSPNE 1747
Score = 85.9 bits (211), Expect = 2e-15
Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP A + S +SP S S SP +SP+SPSYSP+SP+YSP+SP+YSP+SP S SP
Sbjct: 1525 SPYGADARSPGYMSPFSGAS--SPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPS 1582
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1583 YSPTSPSYSPTSPSYSPTSP-SYSP 1606
Score = 68.2 bits (165), Expect = 5e-10
Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = -1
Query: 575 ASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGY 399
ASPY + + SP +SP +SPSSP+YSPSSP S SP YSP S YSPT P Y
Sbjct: 1524 ASPYGADARSPGYMSPFSGASSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSY 1583
Query: 398 SPSSTGQYTP 369
SP+S Y+P
Sbjct: 1584 SPTSP-SYSP 1592
[103][TOP]
>UniRef100_B3LH31 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae RM11-1a
RepID=B3LH31_YEAS1
Length = 1733
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1560 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1619
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1620 SPTSPSYSPTSPSYSPTSP-SYSP 1642
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1581 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1640
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1641 SPTSPSYSPTSPSYSPTSPA-YSP 1663
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1609 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSY 1668
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1669 SPTSPSYSPTSPSYSPTSP-SYSP 1691
Score = 107 bits (267), Expect = 8e-22
Identities = 55/84 (65%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +SP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1539 SPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1598
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1599 SPTSPSYSPTSPSYSPTSP-SYSP 1621
Score = 107 bits (266), Expect = 1e-21
Identities = 54/81 (66%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1644 SPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSY 1703
Query: 437 SP-SAGYSPTLPGYSPSSTGQ 378
SP S GYSP P YSP Q
Sbjct: 1704 SPTSPGYSPGSPAYSPKQDEQ 1724
Score = 99.4 bits (246), Expect = 2e-19
Identities = 59/110 (53%), Positives = 69/110 (62%), Gaps = 22/110 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP SP S
Sbjct: 1616 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSY 1675
Query: 458 SGASPDYSP--------SAGYSPTLPGYSPSSTG------QYTPHEGDKK 351
S SP YSP S YSPT P YSP+S G Y+P + ++K
Sbjct: 1676 SPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQK 1725
Score = 88.2 bits (217), Expect = 5e-16
Identities = 44/72 (61%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Frame = -1
Query: 578 PASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLP 405
P SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP S YSPT P
Sbjct: 1530 PTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1589
Query: 404 GYSPSSTGQYTP 369
YSP+S Y+P
Sbjct: 1590 SYSPTSP-SYSP 1600
[104][TOP]
>UniRef100_P04050 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Saccharomyces
cerevisiae RepID=RPB1_YEAST
Length = 1733
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1560 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1619
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1620 SPTSPSYSPTSPSYSPTSP-SYSP 1642
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1581 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1640
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1641 SPTSPSYSPTSPSYSPTSPA-YSP 1663
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1609 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSY 1668
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1669 SPTSPSYSPTSPSYSPTSP-SYSP 1691
Score = 107 bits (267), Expect = 8e-22
Identities = 55/84 (65%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +SP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1539 SPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1598
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1599 SPTSPSYSPTSPSYSPTSP-SYSP 1621
Score = 107 bits (266), Expect = 1e-21
Identities = 54/81 (66%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1644 SPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSY 1703
Query: 437 SP-SAGYSPTLPGYSPSSTGQ 378
SP S GYSP P YSP Q
Sbjct: 1704 SPTSPGYSPGSPAYSPKQDEQ 1724
Score = 99.4 bits (246), Expect = 2e-19
Identities = 59/110 (53%), Positives = 69/110 (62%), Gaps = 22/110 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP YSP SP S
Sbjct: 1616 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSY 1675
Query: 458 SGASPDYSP--------SAGYSPTLPGYSPSSTG------QYTPHEGDKK 351
S SP YSP S YSPT P YSP+S G Y+P + ++K
Sbjct: 1676 SPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQK 1725
Score = 88.6 bits (218), Expect = 4e-16
Identities = 44/73 (60%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Frame = -1
Query: 581 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 408
+P SP + +SP +SPTSP+YSPTSP+YSP+SP+YSP+SP S SP YSP S YSPT
Sbjct: 1529 APTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1588
Query: 407 PGYSPSSTGQYTP 369
P YSP+S Y+P
Sbjct: 1589 PSYSPTSP-SYSP 1600
[105][TOP]
>UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1
Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO
Length = 1752
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1617 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1676
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1677 SPTSPSYSPTSPSYSPTSP-SYSP 1699
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1638 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1697
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1698 SPTSPSYSPTSPSYSPTSP-SYSP 1720
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1659 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1718
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1719 SPTSPSYSPTSPSYSPTSP-SYSP 1741
Score = 106 bits (265), Expect = 1e-21
Identities = 56/91 (61%), Positives = 65/91 (71%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1589 SPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1648
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1649 SPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1678
Score = 104 bits (259), Expect = 7e-21
Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S +YSPS+ S + Y P+SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YS
Sbjct: 1555 SPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYS 1614
Query: 434 P-SAGYSPTLPGYSPSSTGQYTP 369
P S YSPT P YSP+S Y+P
Sbjct: 1615 PTSPSYSPTSPSYSPTSP-SYSP 1636
Score = 99.8 bits (247), Expect = 2e-19
Identities = 50/72 (69%), Positives = 57/72 (79%), Gaps = 2/72 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1680 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1739
Query: 437 SP-SAGYSPTLP 405
SP S YSPT P
Sbjct: 1740 SPTSPSYSPTSP 1751
Score = 98.6 bits (244), Expect = 4e-19
Identities = 55/85 (64%), Positives = 62/85 (72%), Gaps = 9/85 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP S
Sbjct: 1666 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1725
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSS 387
S SP YSP S YSPT P YSP+S
Sbjct: 1726 SPTSPSYSPTSPSYSPTSPSYSPTS 1750
Score = 94.4 bits (233), Expect = 7e-18
Identities = 52/88 (59%), Positives = 62/88 (70%), Gaps = 4/88 (4%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S S AY PS+ SP SP YSPTSP+YSPTSPSYSPTSPSYS +SP+YSP+SP S SP
Sbjct: 1566 STSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSP 1625
Query: 443 DYSPSAGYSPTLPGYSPS---STGQYTP 369
YSP+ SP+ SPS ++ Y+P
Sbjct: 1626 SYSPT---SPSYSPTSPSYSPTSPSYSP 1650
Score = 91.7 bits (226), Expect = 5e-17
Identities = 48/83 (57%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S Y ++ SP+SP TSP Y P+SPSYSPTSPSYSP+SP+YSP+SP S SP YS
Sbjct: 1548 SPGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1607
Query: 434 -PSAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1608 ATSPSYSPTSPSYSPTSP-SYSP 1629
Score = 70.9 bits (172), Expect = 8e-11
Identities = 46/79 (58%), Positives = 47/79 (59%), Gaps = 13/79 (16%)
Frame = -1
Query: 584 LSPASPY----SP--TSPNYSPTSPSYSPTSPSYSPSSPTYS------PSSPYSSGASPD 441
L ASPY SP TSP S SP Y TSPSYSPSSP YS PSSP S SP
Sbjct: 1525 LGAASPYKGVQSPGYTSPFSSAMSPGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPS 1584
Query: 440 YSP-SAGYSPTLPGYSPSS 387
YSP S YSPT P YSP+S
Sbjct: 1585 YSPTSPSYSPTSPSYSPTS 1603
Score = 70.9 bits (172), Expect = 8e-11
Identities = 41/81 (50%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAG 423
SP ++ +SP Y TSP+YSP+SP YS TSP+Y PSSP+YSP+SP S SP YSP+
Sbjct: 1541 SPFSSAMSPG--YGLTSPSYSPSSPGYS-TSPAYMPSSPSYSPTSPSYSPTSPSYSPT-- 1595
Query: 422 YSPTLPGYSPS---STGQYTP 369
SP+ SPS ++ Y+P
Sbjct: 1596 -SPSYSPTSPSYSATSPSYSP 1615
Score = 70.5 bits (171), Expect = 1e-10
Identities = 33/45 (73%), Positives = 39/45 (86%), Gaps = 1/45 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT 483
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+
Sbjct: 1708 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1752
Score = 69.3 bits (168), Expect = 2e-10
Identities = 36/52 (69%), Positives = 41/52 (78%), Gaps = 4/52 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSP---TYSPS 471
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP SPS
Sbjct: 1701 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1752
[106][TOP]
>UniRef100_Q8SSC4 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Encephalitozoon
cuniculi RepID=RPB1_ENCCU
Length = 1599
Score = 109 bits (272), Expect = 2e-22
Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1477 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1536
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1537 SPTSPSYSPTSPSYSPTSP-SYSP 1559
Score = 106 bits (264), Expect = 2e-21
Identities = 57/95 (60%), Positives = 67/95 (70%), Gaps = 7/95 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1498 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1557
Query: 437 SP-SAGYSPTLPGYSP-----SSTGQYTPHEGDKK 351
SP S YSPT P YS S+ + +GDKK
Sbjct: 1558 SPTSPSYSPTSPSYSVSMSSFSNKNKSKNQDGDKK 1592
Score = 105 bits (263), Expect = 2e-21
Identities = 57/84 (67%), Positives = 64/84 (76%), Gaps = 3/84 (3%)
Frame = -1
Query: 611 IAYSPS-NARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
+AYS RLSP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1456 MAYSRDLGERLSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1515
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1516 SPTSPSYSPTSPSYSPTSP-SYSP 1538
Score = 98.6 bits (244), Expect = 4e-19
Identities = 59/113 (52%), Positives = 70/113 (61%), Gaps = 6/113 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP SP
Sbjct: 1491 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP----T 1546
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP*KR 294
SP YSP S YSPT P YSP+S P K+ SK+ G+ +R
Sbjct: 1547 SPSYSPTSPSYSPTSPSYSPTS-----PSYSVSMSSFSNKNKSKNQDGDKKRR 1594
Score = 67.8 bits (164), Expect = 7e-10
Identities = 43/97 (44%), Positives = 54/97 (55%), Gaps = 27/97 (27%)
Frame = -1
Query: 578 PASPY--SPTSPNYSPTSP------------------------SYSPTSPSYSPSSPTYS 477
PA+P +P+S ++S +S SYSPTSPSYSP+SP+YS
Sbjct: 1429 PATPVISTPSSDSFSISSGNWSPTHLEMAYSRDLGERLSPTSPSYSPTSPSYSPTSPSYS 1488
Query: 476 PSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1489 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1524
[107][TOP]
>UniRef100_Q4QZ03 DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum tuberosum
RepID=Q4QZ03_SOLTU
Length = 361
Score = 108 bits (271), Expect = 3e-22
Identities = 57/84 (67%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSPS+ SP+SP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP Y
Sbjct: 120 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 179
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S+ Y+P
Sbjct: 180 SPTSPSYSPTSPSYSPTSS-SYSP 202
Score = 104 bits (260), Expect = 5e-21
Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP YSPTSP+YSPT PSYSP+ P+YSP+SP S SP Y
Sbjct: 204 SPSYSPTSPIYSPTSPAYSPTSPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSY 263
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S G Y+P
Sbjct: 264 SPTSPSYSPTFPAYSPTSPG-YSP 286
Score = 103 bits (258), Expect = 9e-21
Identities = 53/77 (68%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSPS+ SP SP YSPTSP+YSPTSPSYSPTS SYSP+SP+YSP+SP S SP Y
Sbjct: 162 SPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAY 221
Query: 437 SP-SAGYSPTLPGYSPS 390
SP S YSPT P YSP+
Sbjct: 222 SPTSPAYSPTSPAYSPT 238
Score = 102 bits (255), Expect = 2e-20
Identities = 54/84 (64%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP P YSPT P+YSPTSPSYSPTSPSYSP+SP+YSP+ P S SP Y
Sbjct: 225 SPAYSPTSPAYSPTLPSYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGY 284
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y P
Sbjct: 285 SPTSPSYSPTSPSYSPTSP-SYNP 307
Score = 102 bits (253), Expect = 3e-20
Identities = 51/80 (63%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Frame = -1
Query: 620 SPSI-AYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SP++ +YSP++ SP SP YSPTSP+YSPT P+YSPTSP YSP+SP+YSP+SP S S
Sbjct: 243 SPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTSPSYSPTS 302
Query: 446 PDYSPSAGYSPTLPGYSPSS 387
P Y+PSA YSP+L YSP+S
Sbjct: 303 PSYNPSARYSPSL-AYSPTS 321
Score = 100 bits (249), Expect = 1e-19
Identities = 53/91 (58%), Positives = 62/91 (68%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S AYSP++ SP SP YSPTSP+YSPTSP YSPTSP+YSP+SP YSP+SP
Sbjct: 176 SPAYSPTSPSYSPTSPSYSPTSSSYSPTSPSYSPTSPIYSPTSPAYSPTSPAYSPTSPAY 235
Query: 458 SGASPDYSPS-AGYSPTLPGYSPSSTGQYTP 369
S P YSP+ YSPT P YSP+S Y+P
Sbjct: 236 SPTLPSYSPTLPSYSPTSPSYSPTSP-SYSP 265
Score = 99.4 bits (246), Expect = 2e-19
Identities = 52/84 (61%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP YSP+SP YSPTSP+YSP+SP+YSP+SP S S Y
Sbjct: 141 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSSSY 200
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 201 SPTSPSYSPTSPIYSPTSPA-YSP 223
Score = 97.8 bits (242), Expect = 6e-19
Identities = 56/102 (54%), Positives = 65/102 (63%), Gaps = 20/102 (19%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS------- 459
S +YSP++ SP P YSPTSP YSPTSPSYSPTSPSYSP+SP+Y+PS+ YS
Sbjct: 260 SPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSLAYSP 319
Query: 458 -----------SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S +SP YSP S YSPT P YSPSS Y+P
Sbjct: 320 TSPKLSPSSPYSPSSPSYSPTSPSYSPTSPSYSPSSP-TYSP 360
Score = 95.5 bits (236), Expect = 3e-18
Identities = 42/50 (84%), Positives = 49/50 (98%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 471
SPS+AYSP++ +LSP+SPYSP+SP+YSPTSPSYSPTSPSYSPSSPTYSPS
Sbjct: 312 SPSLAYSPTSPKLSPSSPYSPSSPSYSPTSPSYSPTSPSYSPSSPTYSPS 361
Score = 90.1 bits (222), Expect = 1e-16
Identities = 53/87 (60%), Positives = 57/87 (65%), Gaps = 14/87 (16%)
Frame = -1
Query: 608 AYSPSNARLSPASP-YSPTSPNYSPTSPSY------------SPTSPSYSPSSPTYSPSS 468
AYSP++ SP SP YSPTSP+YSPTSPSY SPTSP SPSSP YSPSS
Sbjct: 276 AYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSLAYSPTSPKLSPSSP-YSPSS 334
Query: 467 PYSSGASPDYSP-SAGYSPTLPGYSPS 390
P S SP YSP S YSP+ P YSPS
Sbjct: 335 PSYSPTSPSYSPTSPSYSPSSPTYSPS 361
Score = 88.2 bits (217), Expect = 5e-16
Identities = 50/90 (55%), Positives = 63/90 (70%), Gaps = 6/90 (6%)
Frame = -1
Query: 620 SPSIAYSP-SNARLSP---ASPYSPTS-PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSS 456
SP++ SP ++A+ SP +SPTS P YSP+SP YSP+SP YSP+SP YSP+SP S
Sbjct: 93 SPNMRMSPITDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYS 152
Query: 455 GASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S YSP+ PGYSP+S Y+P
Sbjct: 153 PTSPGYSPTSPTYSPSSPGYSPTSPA-YSP 181
Score = 80.1 bits (196), Expect = 1e-13
Identities = 41/62 (66%), Positives = 50/62 (80%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S +Y+PS AR SP+ YSPTSP SP+SP YSP+SPSYSP+SP+YSP+SP S +SP YS
Sbjct: 302 SPSYNPS-ARYSPSLAYSPTSPKLSPSSP-YSPSSPSYSPTSPSYSPTSPSYSPSSPTYS 359
Query: 434 PS 429
PS
Sbjct: 360 PS 361
[108][TOP]
>UniRef100_A4S3M0 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S3M0_OSTLU
Length = 1646
Score = 108 bits (271), Expect = 3e-22
Identities = 56/92 (60%), Positives = 68/92 (73%), Gaps = 2/92 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1555 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1614
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDK 345
SP S YSPT P YSP+S Y+P E ++ ++
Sbjct: 1615 SPTSPAYSPTSPAYSPTSPA-YSPKEEEENEE 1645
Score = 105 bits (263), Expect = 2e-21
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1527 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1586
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1587 SPTSPAYSPTSPAYSPTSPA-YSP 1609
Score = 95.9 bits (237), Expect = 2e-18
Identities = 52/87 (59%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPAS--PYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
S +A+SP +SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S S
Sbjct: 1506 SDGMAFSPG---MSPGGFGGYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1562
Query: 446 PDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P YSP S YSPT P YSP+S Y+P
Sbjct: 1563 PAYSPTSPAYSPTSPAYSPTSPA-YSP 1588
[109][TOP]
>UniRef100_A8PU11 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PU11_BRUMA
Length = 1943
Score = 108 bits (271), Expect = 3e-22
Identities = 58/91 (63%), Positives = 68/91 (74%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SPTYSP+SP S ASP Y
Sbjct: 1750 SPSYSPASPGYSPSSPRYSPTSPAYSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGY 1809
Query: 437 SPSA--------GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSPSS QY+P
Sbjct: 1810 SPSSPRYSPTSPTYSPTSPAYSPSSP-QYSP 1839
Score = 108 bits (270), Expect = 4e-22
Identities = 56/84 (66%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSP YSPTSPSYSP+SP+YSP+SP S ASP Y
Sbjct: 1701 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGY 1760
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSP+S Y+P
Sbjct: 1761 SPSSPRYSPTSPAYSPTSP-TYSP 1783
Score = 104 bits (260), Expect = 5e-21
Identities = 55/84 (65%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSP SP YSPSSP YSP+SP S SP Y
Sbjct: 1722 SPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPRYSPTSPAYSPTSPTY 1781
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1782 SPTSPAYSPTSPTYSPTSP-SYSP 1804
Score = 102 bits (255), Expect = 2e-20
Identities = 55/85 (64%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP A SP+ +SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP
Sbjct: 1674 SPYGASSPAYGVMSPR--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPG 1731
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1732 YSPTSPSYSPTSPSYSPTSP-SYSP 1755
Score = 102 bits (254), Expect = 3e-20
Identities = 56/84 (66%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSPS+ R SP SP YSPTSP YSP+SP YSP+SP YSPSSP Y+PSSP + ASP Y
Sbjct: 1806 SPGYSPSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPSSPQYTPSSP-AGDASPAY 1864
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSP+ P YSPSS QY+P
Sbjct: 1865 SPTSPQYSPSSPRYSPSSP-QYSP 1887
Score = 102 bits (253), Expect = 3e-20
Identities = 52/83 (62%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP+SP YSPTSP YSPTSP+YSP+SP YSPSSP YSPSSP + +SP
Sbjct: 1799 SPSYSPASPGYSPSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPSSPQYTPSSPAG 1858
Query: 437 SPSAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSPSS +Y+P
Sbjct: 1859 DASPAYSPTSPQYSPSSP-RYSP 1880
Score = 100 bits (250), Expect = 7e-20
Identities = 50/78 (64%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP+YSP SP YSP+SP YSP+SPTYSP+SP S +SP Y
Sbjct: 1778 SPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPTSPTYSPTSPAYSPSSPQY 1837
Query: 437 SPSA-GYSPTLPGYSPSS 387
SPS+ YSP+ P Y+PSS
Sbjct: 1838 SPSSPQYSPSSPQYTPSS 1855
Score = 97.1 bits (240), Expect = 1e-18
Identities = 55/95 (57%), Positives = 65/95 (68%), Gaps = 13/95 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPS------YSPTSPSYSPSSPTYSPSSPYSS 456
S AYSPS+ + SP+SP YSP+SP Y+P+SP+ YSPTSP YSPSSP YSPSSP S
Sbjct: 1827 SPAYSPSSPQYSPSSPQYSPSSPQYTPSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYS 1886
Query: 455 GASPDYSPSA------GYSPTLPGYSPSSTGQYTP 369
SP YSPS+ YS + P YSPSS QY+P
Sbjct: 1887 PTSPQYSPSSPGGAGTSYSRSSPQYSPSSP-QYSP 1920
Score = 96.7 bits (239), Expect = 1e-18
Identities = 49/79 (62%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 426
SP + SPASPY +SP Y SP YSPTSPSYSP+SP+YSP+SP S SP YSP S
Sbjct: 1664 SPGYSPTSPASPYGASSPAYGVMSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1723
Query: 425 GYSPTLPGYSPSSTGQYTP 369
YSPT PGYSP+S Y+P
Sbjct: 1724 SYSPTSPGYSPTSP-SYSP 1741
Score = 96.7 bits (239), Expect = 1e-18
Identities = 57/88 (64%), Positives = 61/88 (69%), Gaps = 6/88 (6%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S AYSP++ SP SP YSPTSP YSPTSPSYSP SP YSPSSP YSP SP
Sbjct: 1771 SPAYSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPTSPTYSP----T 1826
Query: 449 SPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
SP YSPS+ YSP+ P YSPSS QYTP
Sbjct: 1827 SPAYSPSSPQYSPSSPQYSPSSP-QYTP 1853
Score = 95.5 bits (236), Expect = 3e-18
Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 20/99 (20%)
Frame = -1
Query: 605 YSPSNARLSPASP-------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-- 453
YSPS+ + +P+SP YSPTSP YSP+SP YSP+SP YSP+SP YSPSSP +G
Sbjct: 1844 YSPSSPQYTPSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTS 1903
Query: 452 ----------ASPDYSPSAG-YSPTLPGYSPSSTGQYTP 369
+SP YSPS+ YSP+ P YSPSS QY+P
Sbjct: 1904 YSRSSPQYSPSSPQYSPSSPQYSPSSPQYSPSSP-QYSP 1941
Score = 72.0 bits (175), Expect = 4e-11
Identities = 36/58 (62%), Positives = 43/58 (74%), Gaps = 7/58 (12%)
Frame = -1
Query: 605 YSPSNARLSPASP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YSSG 453
YSP++ + SP+SP YS +SP YSP+SP YSP+SP YSPSSP YSPSSP YS G
Sbjct: 1885 YSPTSPQYSPSSPGGAGTSYSRSSPQYSPSSPQYSPSSPQYSPSSPQYSPSSPQYSPG 1942
Score = 64.3 bits (155), Expect = 8e-09
Identities = 39/79 (49%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Frame = -1
Query: 581 SPASPYSPTSPNYSP-----TSPSYSPTSPS--YSPSSPTYSPSSPYSSGASPDYSP-SA 426
S A YSP + +Y +SP YSPTSP+ Y SSP Y SP S SP YSP S
Sbjct: 1643 SGAGAYSPAASDYGSGLEGLSSPGYSPTSPASPYGASSPAYGVMSPRYSPTSPSYSPTSP 1702
Query: 425 GYSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 1703 SYSPTSPSYSPTSP-SYSP 1720
[110][TOP]
>UniRef100_B6AG69 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AG69_9CRYT
Length = 1927
Score = 108 bits (269), Expect = 5e-22
Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP YSPTSPNYSPTSP YSPTSP+YSPSSP YSP+SP + ASP+YSPS
Sbjct: 1762 YSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYSPS 1821
Query: 428 A-GYSPTLPGYSPSSTGQYTP 369
+ Y+P P YSPSS QY P
Sbjct: 1822 SPHYNPASPNYSPSSP-QYNP 1841
Score = 107 bits (268), Expect = 6e-22
Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSP+YSPTSP YSP+SP YSP+SP+ S SP+YSP
Sbjct: 1727 YSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPT 1786
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSPSS Y+P
Sbjct: 1787 SPHYSPTSPNYSPSSP-HYSP 1806
Score = 107 bits (266), Expect = 1e-21
Identities = 54/81 (66%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSPNYSPTSP YSPTSP YSP+SP YSP+SP+ S SP+YSP
Sbjct: 1699 YSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPT 1758
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1759 SPHYSPTSPNYSPTSP-HYSP 1778
Score = 103 bits (257), Expect = 1e-20
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S S SP++ + P SP YSPTSPNYSPTSP+YSPTSP+YSP+SP YSP+SP+ S SP
Sbjct: 1680 SSSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSP 1739
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1740 HYSPTSPHYSPTSPNYSPTSP-HYSP 1764
Score = 102 bits (255), Expect = 2e-20
Identities = 53/81 (65%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP
Sbjct: 1706 YSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPT 1765
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1766 SPNYSPTSPHYSPTSP-NYSP 1785
Score = 102 bits (253), Expect = 3e-20
Identities = 54/86 (62%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
SP + P + SP SP YSPTSPNYSPTSP+YSPTSP YSP+SP YSP+SP+ S SP
Sbjct: 1689 SPGV--EPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSP 1746
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1747 HYSPTSPNYSPTSPHYSPTSP-NYSP 1771
Score = 98.2 bits (243), Expect = 5e-19
Identities = 50/103 (48%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP YSP+SP+YSPTSPSY+P SP+YSPSSP Y+P+SP S +SP Y+P+
Sbjct: 1783 YSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYSPSSPHYNPASPNYSPSSPQYNPA 1842
Query: 428 -AGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
YSP+ P Y+P+S Y+P + G D+ + +P
Sbjct: 1843 LPNYSPSSPQYNPTSP-NYSPSSPNYVLSNGNIDSPQYSPSSP 1884
Score = 96.3 bits (238), Expect = 2e-18
Identities = 53/88 (60%), Positives = 64/88 (72%), Gaps = 9/88 (10%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-------SSPYSSGA 450
YSP++ SP SP YSPTSPNYSPTSP YSPTSP+YSP+SP YSP +SP+ S
Sbjct: 1734 YSPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPT 1793
Query: 449 SPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
SP+YSPS+ YSPT P Y+P+S Y+P
Sbjct: 1794 SPNYSPSSPHYSPTSPSYNPASP-NYSP 1820
Score = 84.0 bits (206), Expect = 9e-15
Identities = 42/82 (51%), Positives = 56/82 (68%), Gaps = 7/82 (8%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +Y+P++ SP+SP Y+P SPNYSP+SP Y+P P+YSPSSP Y+P+SP S +SP+Y
Sbjct: 1808 SPSYNPASPNYSPSSPHYNPASPNYSPSSPQYNPALPNYSPSSPQYNPTSPNYSPSSPNY 1867
Query: 437 SPSAG------YSPTLPGYSPS 390
S G YSP+ P Y S
Sbjct: 1868 VLSNGNIDSPQYSPSSPHYDQS 1889
Score = 79.3 bits (194), Expect = 2e-13
Identities = 43/81 (53%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = -1
Query: 608 AYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
AYSP++ S +SP SPTSP P SP+YSP+SP YSP+SP S SP+YSP
Sbjct: 1664 AYSPTSPVYSGDKDGDSSSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPT 1723
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1724 SPHYSPTSPHYSPTSP-HYSP 1743
Score = 58.9 bits (141), Expect = 3e-07
Identities = 48/138 (34%), Positives = 60/138 (43%), Gaps = 54/138 (39%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPN-------YSPTSPS-----YSPTSPSYSPSSPTY- 480
SP I+ S +++P SP SP SP+ YSP SP+ Y+PTSP Y+ SP Y
Sbjct: 1586 SPMISGQFSPVQMTPRSPMSPVSPSGILSPMPYSPASPTSPLIDYTPTSPIYAVRSPAYG 1645
Query: 479 --------------------SPSSPYSSG--------------------ASPDYSP-SAG 423
SP+SP SG SP+YSP S
Sbjct: 1646 HETEERTKKRYKANIATSAYSPTSPVYSGDKDGDSSSPFMSPTSPGVEPLSPNYSPTSPN 1705
Query: 422 YSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 1706 YSPTSPNYSPTSP-NYSP 1722
[111][TOP]
>UniRef100_P35074 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
briggsae RepID=RPB1_CAEBR
Length = 1853
Score = 108 bits (269), Expect = 5e-22
Identities = 56/84 (66%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1613 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1672
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSP+S Y+P
Sbjct: 1673 SPSSPRYSPTSPTYSPTSP-TYSP 1695
Score = 107 bits (266), Expect = 1e-21
Identities = 55/78 (70%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSPSSP YSP+SP S SP Y
Sbjct: 1634 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTY 1693
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S YSPT P YSP+S
Sbjct: 1694 SPTSPTYSPTSPTYSPTS 1711
Score = 106 bits (265), Expect = 1e-21
Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 5/87 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG---AS 447
S +YSP++ SP+SP YSPTSP YSPTSP+YSPTSP+YSP+SPTYSP+SP G +S
Sbjct: 1662 SPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSS 1721
Query: 446 PDYSPSA-GYSPTLPGYSPSSTGQYTP 369
P YSPS+ YSPT P YSP+S QY+P
Sbjct: 1722 PKYSPSSPTYSPTSPSYSPTSP-QYSP 1747
Score = 105 bits (262), Expect = 3e-21
Identities = 56/86 (65%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Frame = -1
Query: 620 SPSI-AYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SPS YSPS+ + SP+SP YSPTSP+YSPTSP YSPTSP YSPSSPTY+PSSP + S
Sbjct: 1711 SPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTS 1770
Query: 446 PDYSPSAGYSPTLPGYSPSSTGQYTP 369
P S YSPT P YSP+S YTP
Sbjct: 1771 PRAFSSPQYSPTSPTYSPTSP-SYTP 1795
Score = 102 bits (254), Expect = 3e-20
Identities = 53/84 (63%), Positives = 61/84 (72%), Gaps = 5/84 (5%)
Frame = -1
Query: 605 YSPSNARLSPASP----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
YSP++ SP SP SP SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1592 YSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1651
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1652 SPTSPSYSPTSPSYSPTSP-SYSP 1674
Score = 102 bits (253), Expect = 3e-20
Identities = 53/81 (65%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSPS+ SP SP YSPTSP YSPTSP YSP+SP+Y+PSSPTY+P+SP + +SP YSP
Sbjct: 1724 YSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSP-RAFSSPQYSPT 1782
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P Y+PSS QY+P
Sbjct: 1783 SPTYSPTSPSYTPSSP-QYSP 1802
Score = 99.4 bits (246), Expect = 2e-19
Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 5/90 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSPSSP S SP Y
Sbjct: 1627 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTY 1686
Query: 437 SP-SAGYSPTLP---GYSPSSTGQYTPHEG 360
SP S YSPT P SP+ + +EG
Sbjct: 1687 SPTSPTYSPTSPTYSPTSPTYSPTSPSYEG 1716
Score = 97.8 bits (242), Expect = 6e-19
Identities = 56/96 (58%), Positives = 65/96 (67%), Gaps = 12/96 (12%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPT----------SPSYSPTSPSYSPSSPTYSP 474
SP + YSP++ S SP YSPTSP+YSPT SPSYSPTSPSYSP+SP+YSP
Sbjct: 1574 SPGV-YSPASPGFSMTSPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSP 1632
Query: 473 SSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1633 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1667
Score = 94.0 bits (232), Expect = 9e-18
Identities = 50/92 (54%), Positives = 66/92 (71%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNY---SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
S YSP++ SP SP YSPTSP+Y SP+SP YSP+SP+YSP+SP+YSP+SP S S
Sbjct: 1690 SPTYSPTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTS 1749
Query: 446 PDYSPSA-GYSPTLPGYSPS-----STGQYTP 369
P YSPS+ Y+P+ P Y+P+ S+ QY+P
Sbjct: 1750 PQYSPSSPTYTPSSPTYNPTSPRAFSSPQYSP 1781
Score = 93.2 bits (230), Expect = 2e-17
Identities = 49/90 (54%), Positives = 60/90 (66%), Gaps = 8/90 (8%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSS 456
S Y+PS+ +P SP YSPTSP YSPTSPSY+P+SP YSP+SPTY+PS
Sbjct: 1756 SPTYTPSSPTYNPTSPRAFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPADQP 1815
Query: 455 GASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
G S YSPS+ YSP+ P YSP+S Y+P
Sbjct: 1816 GTSNQYSPSSPTYSPSSPTYSPASP-SYSP 1844
Score = 90.9 bits (224), Expect = 8e-17
Identities = 49/94 (52%), Positives = 63/94 (67%), Gaps = 15/94 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSP------SYSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSP++ + SP+SP Y+P+SP Y+PTSP YSPTSP+YSP+SP+Y+PSSP S S
Sbjct: 1745 YSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTS 1804
Query: 446 PDYSPSAG--------YSPTLPGYSPSSTGQYTP 369
P Y+PS YSP+ P YSPSS Y+P
Sbjct: 1805 PTYTPSPADQPGTSNQYSPSSPTYSPSSP-TYSP 1837
Score = 83.2 bits (204), Expect = 2e-14
Identities = 50/96 (52%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Frame = -1
Query: 617 PSIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPS----------SPTYSP 474
P A SP SP YSP SP +S TSP YSPTSPSYSP+ SP+YSP
Sbjct: 1559 PLGALSPRTPAYGGMSPGVYSPASPGFSMTSPHYSPTSPSYSPTSPAHHGQSPVSPSYSP 1618
Query: 473 SSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1619 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1653
Score = 82.8 bits (203), Expect = 2e-14
Identities = 45/81 (55%), Positives = 53/81 (65%), Gaps = 8/81 (9%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------TSPSYSPSSPTYSPSSPYSSGA 450
YSP++ SP SP Y+P+SP YSPTSP+Y+P TS YSPSSPTYSPSSP S A
Sbjct: 1779 YSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPTYSPA 1838
Query: 449 SPDYSPSAGYSPTLPGYSPSS 387
SP YSPS+ P Y P +
Sbjct: 1839 SPSYSPSS------PTYDPQN 1853
[112][TOP]
>UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U396_PHYPA
Length = 1742
Score = 107 bits (268), Expect = 6e-22
Identities = 55/84 (65%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP+YSPTSPSY+PTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1582 SPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSY 1641
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1642 SPTSPSYSPTSPSYSPTSPA-YSP 1664
Score = 107 bits (266), Expect = 1e-21
Identities = 56/91 (61%), Positives = 66/91 (72%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ +P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1603 SPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAY 1662
Query: 437 SP--------SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S G Y+P
Sbjct: 1663 SPTSPSYAPTSPAYSPTSPSYSPTSPG-YSP 1692
Score = 106 bits (264), Expect = 2e-21
Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP SP YSPTSP YSPTSPSY+PTSP+YSP+SP+YSP+SP S SP Y
Sbjct: 1638 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSY 1697
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSP+S Y+P
Sbjct: 1698 SPSSPSYSPTSPSYSPTSPA-YSP 1720
Score = 105 bits (262), Expect = 3e-21
Identities = 54/84 (64%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP YSPTSPSYSPTSP YSP+SP+YSP+SP + SP Y
Sbjct: 1561 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSY 1620
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1621 SPTSPSYSPTSPSYSPTSP-SYSP 1643
Score = 105 bits (261), Expect = 4e-21
Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ +P SP YSPTSP+YSPTSP YSPTSPSYSPSSP+YSP+SP S SP Y
Sbjct: 1659 SPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAY 1718
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S YSP+ P YSP+S
Sbjct: 1719 SPTSPRYSPSSPSYSPTS 1736
Score = 103 bits (256), Expect = 1e-20
Identities = 54/84 (64%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSPS+ SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP Y
Sbjct: 1540 SPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGY 1599
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S Y+P
Sbjct: 1600 SPTSPSYSPTSPSYAPTSP-SYSP 1622
Score = 99.8 bits (247), Expect = 2e-19
Identities = 54/89 (60%), Positives = 64/89 (71%), Gaps = 5/89 (5%)
Frame = -1
Query: 620 SPSIAYSP-SNARLSPA---SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 453
SPS+ SP S+A+ SP P+SP+SP YSP+SP YSP SP YSP+SP YSP+SP S
Sbjct: 1514 SPSLRASPLSDAQFSPYVGNMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSP 1573
Query: 452 ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S GYSPT P YSP+S G Y+P
Sbjct: 1574 TSPGYSPTSPGYSPTSPSYSPTSPG-YSP 1601
Score = 87.4 bits (215), Expect = 9e-16
Identities = 48/78 (61%), Positives = 56/78 (71%), Gaps = 6/78 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S +Y+P++ SP SP YSPTSP YSPTSPSYSP+SPSYSP+SP+YSP SP
Sbjct: 1666 SPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSP----T 1721
Query: 449 SPDYSPSA-GYSPTLPGY 399
SP YSPS+ YSPT P Y
Sbjct: 1722 SPRYSPSSPSYSPTSPSY 1739
Score = 68.6 bits (166), Expect = 4e-10
Identities = 49/90 (54%), Positives = 54/90 (60%), Gaps = 6/90 (6%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-- 453
SPS SPS R SP S +SP N +SP+SP YSPSSP YSP SP G
Sbjct: 1508 SPSYLLSPS-LRASPLSDAQFSPYVGNMP-----FSPSSPGYSPSSPGYSPLSP---GYS 1558
Query: 452 -ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S GYSPT PGYSP+S G Y+P
Sbjct: 1559 PTSPGYSPTSPGYSPTSPGYSPTSPG-YSP 1587
Score = 68.6 bits (166), Expect = 4e-10
Identities = 36/55 (65%), Positives = 41/55 (74%), Gaps = 4/55 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSP---TYSPSSPY 462
S YSP++ SP+SP YSPTSP+YSPTSP+YSPTSP YSPSSP SPS Y
Sbjct: 1687 SPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPSSPSYSPTSPSYRY 1741
Score = 55.1 bits (131), Expect = 5e-06
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPT--SPSYSPSSPTYSPSSPYSSG-- 453
+P I ++ +SP+ SP+ + +SP + +SPSSP YSPSS G
Sbjct: 1495 TPMIGTPHNDGMMSPSYLLSPSLRASPLSDAQFSPYVGNMPFSPSSPGYSPSS---PGYS 1551
Query: 452 -ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S GYSPT PGYSP+S G Y+P
Sbjct: 1552 PLSPGYSPTSPGYSPTSPGYSPTSPG-YSP 1580
[113][TOP]
>UniRef100_Q7Q3C6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7Q3C6_ANOGA
Length = 1878
Score = 107 bits (267), Expect = 8e-22
Identities = 55/89 (61%), Positives = 67/89 (75%), Gaps = 7/89 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP+YSPTSP+++P +PSYSPSSP YSP+SP+ S ASP Y
Sbjct: 1676 SPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSY 1735
Query: 437 SPSA-GYSPTLPGYSPSS-----TGQYTP 369
SPS+ YSPT P YSP+S + YTP
Sbjct: 1736 SPSSPKYSPTSPSYSPTSPSYIGSPHYTP 1764
Score = 104 bits (259), Expect = 7e-21
Identities = 52/84 (61%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ SP+SP +SPTSP+YSP+SPSYSPTSPSYSP+SP+YSP+SP + +P Y
Sbjct: 1655 SPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSY 1714
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSP+S Y+P
Sbjct: 1715 SPSSPNYSPTSPHYSPASP-SYSP 1737
Score = 97.8 bits (242), Expect = 6e-19
Identities = 56/113 (49%), Positives = 66/113 (58%), Gaps = 15/113 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ +P +P YSP+SPNYSPTSP YSP SPSYSPSSP YSP+SP S SP Y
Sbjct: 1697 SPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSSPKYSPTSPSYSPTSPSY 1756
Query: 437 ---------SPSAG-----YSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASK 321
SP G YSPT P YSPSS Q++P G S+
Sbjct: 1757 IGSPHYTPASPQYGQASPNYSPTSPSYSPSSP-QHSPGSSSNHYSIGSSSYSQ 1808
Score = 95.5 bits (236), Expect = 3e-18
Identities = 51/93 (54%), Positives = 61/93 (65%), Gaps = 14/93 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
YSP++ SP SP YSPTSP+YSPTSPSYSP+SP +SP+SP+YSPSSP
Sbjct: 1625 YSPTSPSYSPMSPMHPTSASNFASPGYSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSP 1684
Query: 464 YSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P ++P T Y+P
Sbjct: 1685 SYSPTSPSYSPTSPSYSPTSPNFTP-VTPSYSP 1716
Score = 85.5 bits (210), Expect = 3e-15
Identities = 59/138 (42%), Positives = 67/138 (48%), Gaps = 54/138 (39%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP------YSPTSP----------------------------NY 543
S S +YSPS+ +P SP YSPTSP NY
Sbjct: 1566 SMSPSYSPSSPNYAPNSPGGASPSYSPTSPGYSPPSPQYSPGSSNYSPSSPNIHSATQNY 1625
Query: 542 SPTSPS-------------------YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-G 423
SPTSPS YSPTSPSYSP+SP+YSPSSP S SP YSPS+
Sbjct: 1626 SPTSPSYSPMSPMHPTSASNFASPGYSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPS 1685
Query: 422 YSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 1686 YSPTSPSYSPTSP-SYSP 1702
Score = 83.2 bits (204), Expect = 2e-14
Identities = 53/111 (47%), Positives = 63/111 (56%), Gaps = 38/111 (34%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSY--------------------SPSS 489
YSP++ SPASP YSP+SP YSPTSPSYSPTSPSY SP+S
Sbjct: 1721 YSPTSPHYSPASPSYSPSSPKYSPTSPSYSPTSPSYIGSPHYTPASPQYGQASPNYSPTS 1780
Query: 488 PTYSPSSP----------YSSGASP------DYSPS-AGYSPTLPGYSPSS 387
P+YSPSSP YS G+S YSP+ + YSP+ P YSP+S
Sbjct: 1781 PSYSPSSPQHSPGSSSNHYSIGSSSYSQTPAPYSPNMSSYSPSSPKYSPTS 1831
Score = 83.2 bits (204), Expect = 2e-14
Identities = 51/103 (49%), Positives = 61/103 (59%), Gaps = 24/103 (23%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSY--------------------SPTSPSYSPSS 489
YSP++ SP+SP YSPTSP+YSPTSPSY SPTSPSYSPSS
Sbjct: 1728 YSPASPSYSPSSPKYSPTSPSYSPTSPSYIGSPHYTPASPQYGQASPNYSPTSPSYSPSS 1787
Query: 488 PTYSP---SSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
P +SP S+ YS G+S A YSP + YSPSS +Y+P
Sbjct: 1788 PQHSPGSSSNHYSIGSSSYSQTPAPYSPNMSSYSPSSP-KYSP 1829
Score = 79.7 bits (195), Expect = 2e-13
Identities = 45/89 (50%), Positives = 53/89 (59%), Gaps = 11/89 (12%)
Frame = -1
Query: 605 YSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSS 456
YSP++ SP+SP YS S +YS T YSP SYSPSSP YSP+SP +
Sbjct: 1776 YSPTSPSYSPSSPQHSPGSSSNHYSIGSSSYSQTPAPYSPNMSSYSPSSPKYSPTSPVYT 1835
Query: 455 GASPDYSPSA-GYSPTLPGYSPSSTGQYT 372
+SP YSPS+ YSPT GYSPSS T
Sbjct: 1836 SSSPTYSPSSPAYSPTPQGYSPSSPASPT 1864
Score = 79.7 bits (195), Expect = 2e-13
Identities = 46/93 (49%), Positives = 53/93 (56%), Gaps = 17/93 (18%)
Frame = -1
Query: 614 SIAYSPSNARLSPAS-----------------PYSPTSPNYSPTSPSYSPTSPSYSPSSP 486
S +YSPS+ + SP S PYSP +YSP+SP YSPTSP Y+ SSP
Sbjct: 1780 SPSYSPSSPQHSPGSSSNHYSIGSSSYSQTPAPYSPNMSSYSPSSPKYSPTSPVYTSSSP 1839
Query: 485 TYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 387
TYSPSSP S YSPS SP P YSP+S
Sbjct: 1840 TYSPSSPAYSPTPQGYSPS---SPASPTYSPTS 1869
Score = 75.5 bits (184), Expect = 3e-12
Identities = 41/77 (53%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSP-ASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YS + A SP S YSP+SP YSPTSP Y+ +SP+YSPSSP YSP+ G SP
Sbjct: 1803 SSSYSQTPAPYSPNMSSYSPSSPKYSPTSPVYTSSSPTYSPSSPAYSPT---PQGYSPSS 1859
Query: 437 SPSAGYSPTLPGYSPSS 387
S YSPT P Y S+
Sbjct: 1860 PASPTYSPTSPSYDDSN 1876
Score = 73.6 bits (179), Expect = 1e-11
Identities = 45/85 (52%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S + SPS+ SP SP P+ SP PS SPSYSPSSP Y+P+SP GASP
Sbjct: 1533 SDASGMSPSSWSPIRGSPSSP-GPSMSPYPPSSPSMSPSYSPSSPNYAPNSP--GGASPS 1589
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S GYSP P YSP S+ Y+P
Sbjct: 1590 YSPTSPGYSPPSPQYSPGSS-NYSP 1613
Score = 67.0 bits (162), Expect = 1e-09
Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSP---TYSPSSPYSS 456
SP+++ YSPS+ + SP SP Y+ +SP YSP+SP+YSPT YSPSSP TYSP+SP
Sbjct: 1814 SPNMSSYSPSSPKYSPTSPVYTSSSPTYSPSSPAYSPTPQGYSPSSPASPTYSPTSPSYD 1873
Query: 455 GASPD 441
++ D
Sbjct: 1874 DSNED 1878
[114][TOP]
>UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1EA31_9CHLO
Length = 1720
Score = 107 bits (266), Expect = 1e-21
Identities = 56/84 (66%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1594 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1653
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S QY+P
Sbjct: 1654 SPTSPAYSPTSPQYSPTSP-QYSP 1676
Score = 106 bits (265), Expect = 1e-21
Identities = 54/80 (67%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1615 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSPQY 1674
Query: 437 SP-SAGYSPTLPGYSPSSTG 381
SP S YSPT P YSP+S G
Sbjct: 1675 SPTSPQYSPTSPQYSPTSLG 1694
Score = 105 bits (263), Expect = 2e-21
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1531 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1590
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1591 SPTSPAYSPTSPAYSPTSPA-YSP 1613
Score = 105 bits (263), Expect = 2e-21
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1552 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1611
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1612 SPTSPAYSPTSPAYSPTSPA-YSP 1634
Score = 105 bits (263), Expect = 2e-21
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1573 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1632
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 1633 SPTSPAYSPTSPAYSPTSPA-YSP 1655
Score = 94.0 bits (232), Expect = 9e-18
Identities = 51/89 (57%), Positives = 61/89 (68%), Gaps = 7/89 (7%)
Frame = -1
Query: 614 SIAYSP------SNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 453
S+ +SP S+A + YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S
Sbjct: 1505 SMRFSPQGTDYGSHAGGGQSPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1564
Query: 452 ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S YSPT P YSP+S Y+P
Sbjct: 1565 TSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1592
Score = 86.7 bits (213), Expect = 1e-15
Identities = 49/81 (60%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S AYSP++ SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP SP S G
Sbjct: 1636 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSLGL 1695
Query: 449 SPDYSPSAGYSPTLPGYSPSS 387
S +P+ SPT P YSPS+
Sbjct: 1696 SDADAPTR--SPTSPQYSPST 1714
[115][TOP]
>UniRef100_C5LSN8 P35 antigen, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC
50983 RepID=C5LSN8_9ALVE
Length = 170
Score = 106 bits (265), Expect = 1e-21
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 47 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSY 106
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 107 SPTSPAYSPTSPAYSPTSPA-YSP 129
Score = 105 bits (263), Expect = 2e-21
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 5 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 64
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 65 SPTSPAYSPTSPAYSPTSPA-YSP 87
Score = 105 bits (263), Expect = 2e-21
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 26 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 85
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 86 SPTSPAYSPTSPAYSPTSP-SYSP 108
Score = 100 bits (250), Expect = 7e-20
Identities = 52/83 (62%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSPSYSP+SP YSP+SP S SP
Sbjct: 68 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSPTSP-- 125
Query: 437 SPSAGYSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y P
Sbjct: 126 ----AYSPTSPAYSPTSPAYYHP 144
Score = 93.6 bits (231), Expect = 1e-17
Identities = 46/67 (68%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -1
Query: 566 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS 390
YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT P YSP+
Sbjct: 1 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 60
Query: 389 STGQYTP 369
S Y+P
Sbjct: 61 SPA-YSP 66
Score = 84.3 bits (207), Expect = 7e-15
Identities = 45/73 (61%), Positives = 51/73 (69%), Gaps = 5/73 (6%)
Frame = -1
Query: 572 SPYSPTS----PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 408
SP SP P YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S YSPT
Sbjct: 2 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 61
Query: 407 PGYSPSSTGQYTP 369
P YSP+S Y+P
Sbjct: 62 PAYSPTSPA-YSP 73
Score = 82.4 bits (202), Expect = 3e-14
Identities = 44/77 (57%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP Y + S D
Sbjct: 96 SPAYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYY----HPLVTSSDE 151
Query: 437 SPSAGYSPTLPGYSPSS 387
P YSPT P YS +S
Sbjct: 152 GPVVRYSPTSPAYSNTS 168
Score = 64.3 bits (155), Expect = 8e-09
Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 17/67 (25%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSY----------------SPSSP 486
S +YSP++ SP SP YSPTSP YSPTSP+YSPTSP+Y SP+SP
Sbjct: 103 SPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYYHPLVTSSDEGPVVRYSPTSP 162
Query: 485 TYSPSSP 465
YS +SP
Sbjct: 163 AYSNTSP 169
Score = 54.3 bits (129), Expect = 8e-06
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 17/61 (27%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSY----------------SPTSPSYSPSSP 486
S AYSP++ SP SP YSPTSP YSPTSP+Y SPTSP+YS +SP
Sbjct: 110 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYYHPLVTSSDEGPVVRYSPTSPAYSNTSP 169
Query: 485 T 483
+
Sbjct: 170 S 170
[116][TOP]
>UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IRZ2_CHLRE
Length = 1789
Score = 105 bits (263), Expect = 2e-21
Identities = 55/87 (63%), Positives = 65/87 (74%), Gaps = 5/87 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1582 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1641
Query: 437 SP-SAGYSPTLPGYSPS---STGQYTP 369
SP S YSPT P YSP+ ++ QY+P
Sbjct: 1642 SPTSPAYSPTSPAYSPAYSPTSPQYSP 1668
Score = 103 bits (258), Expect = 9e-21
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP
Sbjct: 1564 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1623
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1624 SPAYSPTSPAYSPTSPA-YSP 1643
Score = 99.4 bits (246), Expect = 2e-19
Identities = 51/79 (64%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
Frame = -1
Query: 599 PSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 426
P + SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP S
Sbjct: 1545 PMSPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1604
Query: 425 GYSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 1605 AYSPTSPAYSPTSPA-YSP 1622
Score = 99.4 bits (246), Expect = 2e-19
Identities = 56/103 (54%), Positives = 67/103 (65%), Gaps = 6/103 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPS----SPTYSPSSPYSSGA 450
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+ SP YSP+SP S
Sbjct: 1610 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPAYSPTSPQYSPT 1669
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDAS 324
SP SP S YSPT P YSP+S Y+P ++ T + S
Sbjct: 1670 SPSMSPTSPRYSPTSPNYSPTSP-NYSPSTRQRRRSTRPRPTS 1711
Score = 84.0 bits (206), Expect = 9e-15
Identities = 47/84 (55%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSP----TSPSYSPTSPSYSPSSPTYSPSSPYSSGA 450
S AYSP++ SP SP YSPTSP YSP TSP YSPTSPS SP+SP YSP+SP S
Sbjct: 1631 SPAYSPTSPAYSPTSPAYSPTSPAYSPAYSPTSPQYSPTSPSMSPTSPRYSPTSPNYSPT 1690
Query: 449 SPDYSPSAGYSPTLPGYSPSSTGQ 378
SP+YSPS P+S G+
Sbjct: 1691 SPNYSPSTRQRRRSTRPRPTSLGR 1714
Score = 57.0 bits (136), Expect = 1e-06
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 21/92 (22%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPS------------------SPT 483
YSP++ +SP SP YSPTSPNYSPTSP+YSP++ S +PT
Sbjct: 1666 YSPTSPSMSPTSPRYSPTSPNYSPTSPNYSPSTRQRRRSTRPRPTSLGRRRAARVQAAPT 1725
Query: 482 YSP--SSPYSSGASPDYSPSAGYSPTLPGYSP 393
+P + P S S +P + + PT P +P
Sbjct: 1726 PAPPTAPPRMSAPSTHLAPPSAHPPTRPRRAP 1757
[117][TOP]
>UniRef100_Q5CUJ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cryptosporidium parvum
Iowa II RepID=Q5CUJ2_CRYPV
Length = 1902
Score = 105 bits (263), Expect = 2e-21
Identities = 50/80 (62%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP YSPTSP+YSPTSP YSP+SP YSP+SP YSP+SP + ASP+YSP+
Sbjct: 1766 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPT 1825
Query: 428 AGYSPTLPGYSPSSTGQYTP 369
+ YSPT P Y+P+S Y+P
Sbjct: 1826 SHYSPTSPNYNPTSP-NYSP 1844
Score = 103 bits (258), Expect = 9e-21
Identities = 53/81 (65%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP
Sbjct: 1731 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1790
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSP+ P YSP+S QY+P
Sbjct: 1791 SPHYSPSSPHYSPTSP-QYSP 1810
Score = 103 bits (258), Expect = 9e-21
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSPS
Sbjct: 1738 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPS 1797
Query: 428 A-GYSPTLPGYSPSSTGQYTP 369
+ YSPT P YSP+S Y P
Sbjct: 1798 SPHYSPTSPQYSPTSP-NYNP 1817
Score = 103 bits (257), Expect = 1e-20
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP
Sbjct: 1689 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1748
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1749 SPHYSPTSPHYSPTSP-HYSP 1768
Score = 103 bits (257), Expect = 1e-20
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP
Sbjct: 1696 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1755
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1756 SPHYSPTSPHYSPTSP-HYSP 1775
Score = 103 bits (257), Expect = 1e-20
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP
Sbjct: 1703 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1762
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1763 SPHYSPTSPHYSPTSP-HYSP 1782
Score = 103 bits (257), Expect = 1e-20
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP
Sbjct: 1710 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1769
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1770 SPHYSPTSPHYSPTSP-HYSP 1789
Score = 100 bits (250), Expect = 7e-20
Identities = 52/80 (65%), Positives = 60/80 (75%), Gaps = 2/80 (2%)
Frame = -1
Query: 602 SPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-S 429
SP++ SP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP S
Sbjct: 1683 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1742
Query: 428 AGYSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 1743 PHYSPTSPHYSPTSP-HYSP 1761
Score = 98.2 bits (243), Expect = 5e-19
Identities = 51/74 (68%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
Frame = -1
Query: 584 LSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPT 411
LSP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP S YSPT
Sbjct: 1682 LSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1741
Query: 410 LPGYSPSSTGQYTP 369
P YSP+S Y+P
Sbjct: 1742 SPHYSPTSP-HYSP 1754
Score = 94.0 bits (232), Expect = 9e-18
Identities = 52/87 (59%), Positives = 62/87 (71%), Gaps = 7/87 (8%)
Frame = -1
Query: 608 AYSPSNA-----RLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
+YSPS+ ++S SP SPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S S
Sbjct: 1662 SYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1721
Query: 446 PDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P YSP S YSPT P YSP+S Y+P
Sbjct: 1722 PHYSPTSPHYSPTSPHYSPTSP-HYSP 1747
Score = 94.0 bits (232), Expect = 9e-18
Identities = 52/91 (57%), Positives = 63/91 (69%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSP+SP+YSPTSP YSPTSP+Y+P+SP YSP+S YS SP+Y+P
Sbjct: 1780 YSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSP-TSPNYNPT 1838
Query: 431 SAGYSPT----------LPGYSPSSTGQYTP 369
S YSP+ PGYSPSS QY P
Sbjct: 1839 SPNYSPSSPNYISNNSGSPGYSPSSP-QYDP 1868
Score = 74.3 bits (181), Expect = 7e-12
Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 14/81 (17%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPS----------YSPSSPTYSPSSPYSS 456
Y+P++ SP S YSPTSPNY+PTSP+YSP+SP+ YSPSSP Y P + S
Sbjct: 1815 YNPASPNYSPTSHYSPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSPSSPQYDPIAVASV 1874
Query: 455 GASPDYS----PSAGYSPTLP 405
SP YS A YSP+ P
Sbjct: 1875 PRSPSYSVGKMVDAEYSPSSP 1895
Score = 66.6 bits (161), Expect = 2e-09
Identities = 51/123 (41%), Positives = 60/123 (48%), Gaps = 39/123 (31%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPN-------YSPTSPS-----YSPTSPSYSPSSPT-- 483
SP I+ S +++P SP SP SP YSP SPS Y+PTSP Y+ SSPT
Sbjct: 1584 SPMISGQFSPVQMTPRSPMSPVSPGGIFSPVPYSPMSPSSPLMDYTPTSPIYAASSPTYN 1643
Query: 482 -------------------YSPSSPYS-----SGASPDYSP-SAGYSPTLPGYSPSSTGQ 378
YSPSSP + S SPD SP S YSPT P YSP+S
Sbjct: 1644 TEVSERARKKYKVNNTLSSYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSP-H 1702
Query: 377 YTP 369
Y+P
Sbjct: 1703 YSP 1705
[118][TOP]
>UniRef100_Q5CH45 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium hominis
RepID=Q5CH45_CRYHO
Length = 1895
Score = 105 bits (263), Expect = 2e-21
Identities = 50/80 (62%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP YSPTSP+YSPTSP YSP+SP YSP+SP YSP+SP + ASP+YSP+
Sbjct: 1759 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPT 1818
Query: 428 AGYSPTLPGYSPSSTGQYTP 369
+ YSPT P Y+P+S Y+P
Sbjct: 1819 SHYSPTSPNYNPTSP-NYSP 1837
Score = 103 bits (258), Expect = 9e-21
Identities = 53/81 (65%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP
Sbjct: 1724 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1783
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSP+ P YSP+S QY+P
Sbjct: 1784 SPHYSPSSPHYSPTSP-QYSP 1803
Score = 103 bits (258), Expect = 9e-21
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSPS
Sbjct: 1731 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPS 1790
Query: 428 A-GYSPTLPGYSPSSTGQYTP 369
+ YSPT P YSP+S Y P
Sbjct: 1791 SPHYSPTSPQYSPTSP-NYNP 1810
Score = 103 bits (257), Expect = 1e-20
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP
Sbjct: 1682 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1741
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1742 SPHYSPTSPHYSPTSP-HYSP 1761
Score = 103 bits (257), Expect = 1e-20
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP
Sbjct: 1689 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1748
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1749 SPHYSPTSPHYSPTSP-HYSP 1768
Score = 103 bits (257), Expect = 1e-20
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP
Sbjct: 1696 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1755
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1756 SPHYSPTSPHYSPTSP-HYSP 1775
Score = 103 bits (257), Expect = 1e-20
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP
Sbjct: 1703 YSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1762
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1763 SPHYSPTSPHYSPTSP-HYSP 1782
Score = 100 bits (250), Expect = 7e-20
Identities = 52/80 (65%), Positives = 60/80 (75%), Gaps = 2/80 (2%)
Frame = -1
Query: 602 SPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-S 429
SP++ SP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP S
Sbjct: 1676 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1735
Query: 428 AGYSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 1736 PHYSPTSPHYSPTSP-HYSP 1754
Score = 98.2 bits (243), Expect = 5e-19
Identities = 51/74 (68%), Positives = 57/74 (77%), Gaps = 2/74 (2%)
Frame = -1
Query: 584 LSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPT 411
LSP SP YSPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S SP YSP S YSPT
Sbjct: 1675 LSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPT 1734
Query: 410 LPGYSPSSTGQYTP 369
P YSP+S Y+P
Sbjct: 1735 SPHYSPTSP-HYSP 1747
Score = 94.0 bits (232), Expect = 9e-18
Identities = 52/87 (59%), Positives = 62/87 (71%), Gaps = 7/87 (8%)
Frame = -1
Query: 608 AYSPSNA-----RLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
+YSPS+ ++S SP SPTSP+YSPTSP YSPTSP YSP+SP YSP+SP+ S S
Sbjct: 1655 SYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1714
Query: 446 PDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P YSP S YSPT P YSP+S Y+P
Sbjct: 1715 PHYSPTSPHYSPTSPHYSPTSP-HYSP 1740
Score = 94.0 bits (232), Expect = 9e-18
Identities = 52/91 (57%), Positives = 63/91 (69%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSP+SP+YSPTSP YSPTSP+Y+P+SP YSP+S YS SP+Y+P
Sbjct: 1773 YSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSPTSHYSP-TSPNYNPT 1831
Query: 431 SAGYSPT----------LPGYSPSSTGQYTP 369
S YSP+ PGYSPSS QY P
Sbjct: 1832 SPNYSPSSPNYISNNSGSPGYSPSSP-QYDP 1861
Score = 74.3 bits (181), Expect = 7e-12
Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 14/81 (17%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPS----------YSPSSPTYSPSSPYSS 456
Y+P++ SP S YSPTSPNY+PTSP+YSP+SP+ YSPSSP Y P + S
Sbjct: 1808 YNPASPNYSPTSHYSPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSPSSPQYDPIAVTSV 1867
Query: 455 GASPDYS----PSAGYSPTLP 405
SP YS A YSP+ P
Sbjct: 1868 PRSPSYSVGKMVDAEYSPSSP 1888
Score = 66.6 bits (161), Expect = 2e-09
Identities = 51/123 (41%), Positives = 60/123 (48%), Gaps = 39/123 (31%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPN-------YSPTSPS-----YSPTSPSYSPSSPT-- 483
SP I+ S +++P SP SP SP YSP SPS Y+PTSP Y+ SSPT
Sbjct: 1577 SPMISGQFSPVQMTPRSPMSPVSPGGIFSPVPYSPMSPSSPLMDYTPTSPIYAASSPTYN 1636
Query: 482 -------------------YSPSSPYS-----SGASPDYSP-SAGYSPTLPGYSPSSTGQ 378
YSPSSP + S SPD SP S YSPT P YSP+S
Sbjct: 1637 TEVSERARKKYKVNNTLSSYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSP-H 1695
Query: 377 YTP 369
Y+P
Sbjct: 1696 YSP 1698
[119][TOP]
>UniRef100_A8Q5I6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8Q5I6_MALGO
Length = 1607
Score = 105 bits (263), Expect = 2e-21
Identities = 54/81 (66%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP
Sbjct: 1486 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1545
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S QY+P
Sbjct: 1546 SPQYSPTSPQYSPTSP-QYSP 1565
Score = 105 bits (263), Expect = 2e-21
Identities = 54/81 (66%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP
Sbjct: 1493 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1552
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S QY+P
Sbjct: 1553 SPQYSPTSPQYSPTSP-QYSP 1572
Score = 105 bits (263), Expect = 2e-21
Identities = 54/81 (66%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP
Sbjct: 1500 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1559
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S QY+P
Sbjct: 1560 SPQYSPTSPQYSPTSP-QYSP 1579
Score = 102 bits (255), Expect = 2e-20
Identities = 56/97 (57%), Positives = 63/97 (64%), Gaps = 15/97 (15%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYS 477
S AYSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YS
Sbjct: 1449 SPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSPTSPQYSPTSPQYS 1508
Query: 476 PSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P+SP S SP YSP S YSPT P YSP+S QY+P
Sbjct: 1509 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP-QYSP 1544
Score = 102 bits (255), Expect = 2e-20
Identities = 51/74 (68%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP
Sbjct: 1507 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1566
Query: 431 SAGYSPTLPGYSPS 390
S YSPT P YSPS
Sbjct: 1567 SPQYSPTSPQYSPS 1580
Score = 93.2 bits (230), Expect = 2e-17
Identities = 53/93 (56%), Positives = 60/93 (64%), Gaps = 15/93 (16%)
Frame = -1
Query: 602 SPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-------------YSPSSPTYSPSSP 465
SP++ SP SP YSPTSP YSPTSP YSPTSP+ YSP+SP YSP+SP
Sbjct: 1432 SPASPNYSPTSPVYSPTSPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSP 1491
Query: 464 YSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S QY+P
Sbjct: 1492 QYSPTSPQYSPTSPQYSPTSPQYSPTSP-QYSP 1523
Score = 90.9 bits (224), Expect = 8e-17
Identities = 56/96 (58%), Positives = 63/96 (65%), Gaps = 14/96 (14%)
Frame = -1
Query: 614 SIAYSPS-------NARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSS 456
S +YSPS NAR + S SP SPNYSPTSP YSPTSP+YSP+SP YSP+SP
Sbjct: 1408 SPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPTSPAYSPTSPQYSPTSPAGP 1467
Query: 455 -----GAS-PDYSP-SAGYSPTLPGYSPSSTGQYTP 369
GAS P YSP S YSPT P YSP+S QY+P
Sbjct: 1468 RGRRLGASGPKYSPTSPQYSPTSPQYSPTSP-QYSP 1502
Score = 80.1 bits (196), Expect = 1e-13
Identities = 49/112 (43%), Positives = 63/112 (56%), Gaps = 30/112 (26%)
Frame = -1
Query: 614 SIAYSPSNARL---SPASPYSPTSPNYSPTSP-------------SYSPTSPSYSPSSPT 483
S AYSP++ R+ + + YSPTSP+YSP+SP SP SP+YSP+SP
Sbjct: 1385 SPAYSPTSPRIFAGATSPSYSPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPV 1444
Query: 482 YSPSSPYSSGASPDYSPSA--------------GYSPTLPGYSPSSTGQYTP 369
YSP+SP S SP YSP++ YSPT P YSP+S QY+P
Sbjct: 1445 YSPTSPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSP-QYSP 1495
Score = 76.3 bits (186), Expect = 2e-12
Identities = 39/60 (65%), Positives = 43/60 (71%), Gaps = 6/60 (10%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS-----SPYSSGASP 444
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSPS S S ASP
Sbjct: 1535 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPSGNVGASAASGAASP 1594
Score = 69.7 bits (169), Expect = 2e-10
Identities = 54/125 (43%), Positives = 63/125 (50%), Gaps = 41/125 (32%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYS-----------------PTSPSYSP------- 516
+P A SP +P SP Y PTSP Y+ TSP+YSP
Sbjct: 1339 TPLGAQSPGYG-FAPTSPGYVPTSPAYNATSPALGAMSPWVGAAGATSPAYSPTSPRIFA 1397
Query: 515 --TSPSYSPSSPTYSPSSPY-------------SSGASPDYSP-SAGYSPTLPGYSPSST 384
TSPSYSP+SP+YSPSSP S ASP+YSP S YSPT P YSP+S
Sbjct: 1398 GATSPSYSPTSPSYSPSSPVIDASNARSTYTSRMSPASPNYSPTSPVYSPTSPAYSPTSP 1457
Query: 383 GQYTP 369
QY+P
Sbjct: 1458 -QYSP 1461
[120][TOP]
>UniRef100_O00820 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba
castellanii RepID=O00820_ACACA
Length = 1569
Score = 105 bits (262), Expect = 3e-21
Identities = 55/84 (65%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP+ A SP+SP YSP+SP YSP+SP YSP SP YSPSSP YSP+SP S ASP Y
Sbjct: 1472 SPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSY 1531
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSPSS Y+P
Sbjct: 1532 SPTSPAYSPTSPSYSPSSP-SYSP 1554
Score = 104 bits (259), Expect = 7e-21
Identities = 53/84 (63%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSPS+ SP+SP YSP SP YSP+SP+YSPTSP YSP+SP+YSP+SP S SP Y
Sbjct: 1486 SPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPSY 1545
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SPS+ YSPT P YSP+S Y+P
Sbjct: 1546 SPSSPSYSPTSPSYSPTSP-SYSP 1568
Score = 95.5 bits (236), Expect = 3e-18
Identities = 49/76 (64%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP+SP YSPTSP YSP SPSYSPTSP+YSP+SP+YSPSSP S SP
Sbjct: 1500 SPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPSYSPSSPSYSPTSP-- 1557
Query: 437 SPSAGYSPTLPGYSPS 390
YSPT P YSPS
Sbjct: 1558 ----SYSPTSPSYSPS 1569
Score = 90.9 bits (224), Expect = 8e-17
Identities = 48/73 (65%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Frame = -1
Query: 581 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTL 408
SP+SP YSP SP YSP YSP+SP YSPSSP YSPSSP S ASP YSPS+ YSPT
Sbjct: 1462 SPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTS 1521
Query: 407 PGYSPSSTGQYTP 369
P YSP+S Y+P
Sbjct: 1522 PKYSPASP-SYSP 1533
Score = 71.6 bits (174), Expect = 5e-11
Identities = 41/76 (53%), Positives = 53/76 (69%), Gaps = 5/76 (6%)
Frame = -1
Query: 581 SPASPYSPTSP--NYSPTSPSYSPT--SPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYS 417
+PA+ YSP +SP S+SP+ SPSYSP+SP YSP+ S +SP YSPS+ GYS
Sbjct: 1438 TPAASYSPYVDFGEFSPGRGSFSPSPSSPSYSPASPGYSPAGAGYSPSSPGYSPSSPGYS 1497
Query: 416 PTLPGYSPSSTGQYTP 369
P+ PGYSP+S G Y+P
Sbjct: 1498 PSSPGYSPASPG-YSP 1512
[121][TOP]
>UniRef100_O96452 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae
RepID=O96452_ANTLO
Length = 1553
Score = 105 bits (261), Expect = 4e-21
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
+PS+ YSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP
Sbjct: 1435 TPSV-YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1493
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1494 AYSPTSPAYSPTSPAYSPTSPA-YSP 1518
Score = 102 bits (253), Expect = 3e-20
Identities = 52/78 (66%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1457 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1516
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S YSPT P Y PS+
Sbjct: 1517 SPTSPAYSPTSPVYRPST 1534
Score = 73.6 bits (179), Expect = 1e-11
Identities = 45/89 (50%), Positives = 58/89 (65%), Gaps = 5/89 (5%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPAS-PYSPTSPN--YSPTSPS-YSPTSPSYSPSSPTYSPSSPYSSG 453
+P I S+ R +S P+SP + + + T+PS YSPTSP+YSP+SP YSP+SP S
Sbjct: 1403 TPVIRSPVSDVRYGSSSVPFSPIAAHGYAAGTTPSVYSPTSPAYSPTSPAYSPTSPAYSP 1462
Query: 452 ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S YSPT P YSP+S Y+P
Sbjct: 1463 TSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1490
[122][TOP]
>UniRef100_A9TK89 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TK89_PHYPA
Length = 1646
Score = 104 bits (260), Expect = 5e-21
Identities = 52/78 (66%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP YSPTSP YSPTSPSYSP+SP+Y+P+SP S SP Y
Sbjct: 1553 SPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSY 1612
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S YSPT P YSP+S
Sbjct: 1613 SPTSPSYSPTSPSYSPTS 1630
Score = 104 bits (259), Expect = 7e-21
Identities = 54/84 (64%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP YSPTSPSYSPTSP YSP+SP YSP+SP S SP Y
Sbjct: 1539 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSY 1598
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
+P S YSPT P YSP+S Y+P
Sbjct: 1599 APTSPSYSPTSPSYSPTSP-SYSP 1621
Score = 102 bits (255), Expect = 2e-20
Identities = 54/84 (64%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP + SP SP YSPTSP YSPTSP YSPTSPSYSP+SP YSP+SP S SP Y
Sbjct: 1532 SPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSY 1591
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S Y+PT P YSP+S Y+P
Sbjct: 1592 SPTSPSYAPTSPSYSPTSP-SYSP 1614
Score = 99.0 bits (245), Expect = 3e-19
Identities = 55/96 (57%), Positives = 63/96 (65%), Gaps = 12/96 (12%)
Frame = -1
Query: 620 SPSIAYSP----------SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP 474
SPS+ SP + SP+SP YSP+SP YSP SP YSPTSP YSP+SP YSP
Sbjct: 1499 SPSLRASPLSEAQFSPYVGSMPFSPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSP 1558
Query: 473 SSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+SP S SP YSP S GYSPT PGYSP+S Y+P
Sbjct: 1559 TSPGYSPTSPSYSPTSPGYSPTSPGYSPTSP-SYSP 1593
Score = 89.4 bits (220), Expect = 2e-16
Identities = 50/83 (60%), Positives = 55/83 (66%), Gaps = 6/83 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S YSP++ SP SP YSPTSP YSPTSPSYSPTSPSY+P+SP+YSP SP
Sbjct: 1560 SPGYSPTSPSYSPTSPGYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSYSP----T 1615
Query: 449 SPDYSP-SAGYSPTLPGYSPSST 384
SP YSP S YSPT P Y T
Sbjct: 1616 SPSYSPTSPSYSPTSPAYKHKPT 1638
Score = 72.0 bits (175), Expect = 4e-11
Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 453
S +YSP++ +P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP Y + G
Sbjct: 1588 SPSYSPTSPSYAPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYKHKPTWLRG 1642
Score = 66.6 bits (161), Expect = 2e-09
Identities = 49/90 (54%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-- 453
SPS SPS R SP S +SP Y + P +SP+SP YSPSSP YSP SP G
Sbjct: 1493 SPSYLLSPS-LRASPLSEAQFSP----YVGSMP-FSPSSPGYSPSSPGYSPLSP---GYS 1543
Query: 452 -ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S GYSPT PGYSP+S Y+P
Sbjct: 1544 PTSPGYSPTSPGYSPTSPGYSPTSP-SYSP 1572
Score = 57.0 bits (136), Expect = 1e-06
Identities = 41/90 (45%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPT--SPSYSPSSPTYSPSSPYSSG-- 453
SP I + +SP+ SP+ + +SP S +SPSSP YSPSS G
Sbjct: 1480 SPMIGTPHNEGMMSPSYLLSPSLRASPLSEAQFSPYVGSMPFSPSSPGYSPSS---PGYS 1536
Query: 452 -ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S GYSPT PGYSP+S G Y+P
Sbjct: 1537 PLSPGYSPTSPGYSPTSPGYSPTSPG-YSP 1565
[123][TOP]
>UniRef100_Q58EF0 Polr2a protein (Fragment) n=2 Tax=Danio rerio RepID=Q58EF0_DANRE
Length = 161
Score = 103 bits (258), Expect = 9e-21
Identities = 52/84 (61%), Positives = 63/84 (75%), Gaps = 5/84 (5%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP+Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 67 YSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 126
Query: 428 ----AGYSPTLPGYSPSSTGQYTP 369
+ YSPT PGYSP+S Y+P
Sbjct: 127 SPKGSTYSPTSPGYSPTSP-TYSP 149
Score = 102 bits (254), Expect = 3e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 46 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPT 105
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 106 SPTYSPTSPKYSPTSP-TYSP 125
Score = 101 bits (251), Expect = 6e-20
Identities = 52/84 (61%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP Y+PTSP+YSP+SP Y+PTSP YSP+SP YSP+SP S SP Y
Sbjct: 15 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTY 74
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SP+ YSPT P YSP+S YTP
Sbjct: 75 SPTTPKYSPTSPTYSPTSP-TYTP 97
Score = 100 bits (250), Expect = 7e-20
Identities = 52/84 (61%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S Y+PS+ SP+SP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP Y
Sbjct: 8 SPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKY 67
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 68 SPTSPTYSPTTPKYSPTSP-TYSP 90
Score = 99.8 bits (247), Expect = 2e-19
Identities = 50/81 (61%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P + +P+SP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP
Sbjct: 4 YTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 63
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP +T +Y+P
Sbjct: 64 SPKYSPTSPTYSP-TTPKYSP 83
Score = 99.0 bits (245), Expect = 3e-19
Identities = 53/94 (56%), Positives = 65/94 (69%), Gaps = 5/94 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP-- 444
S YSP+ + SP SP YSPTSP Y+PTSP YSPTSP+YSP+SP YSP+SP S SP
Sbjct: 71 SPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKG 130
Query: 443 -DYSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKD 348
YSP S GYSPT P YSP+ +P + D+++
Sbjct: 131 STYSPTSPGYSPTSPTYSPA----ISPDDSDEEN 160
Score = 98.6 bits (244), Expect = 4e-19
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 22 SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 81
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 82 SPTSPTYSPTSPTYTPTSP-KYSP 104
Score = 78.6 bits (192), Expect = 4e-13
Identities = 37/62 (59%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = -1
Query: 551 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQY 375
P Y+P SP+Y+P+SPSYSPSSP+YSP+SP + SP YSPS+ Y+PT P YSP+S +Y
Sbjct: 2 PRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSP-KY 60
Query: 374 TP 369
+P
Sbjct: 61 SP 62
[124][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
RepID=Q9AXN0_9RHOD
Length = 1746
Score = 103 bits (258), Expect = 9e-21
Identities = 58/94 (61%), Positives = 67/94 (71%), Gaps = 12/94 (12%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSP----------TYSPSS 468
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP YSPSSP +YSPSS
Sbjct: 1624 SPAYSPTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSS 1683
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
P+ S +SP YSPS+ YSP+ P YSPSS QY+P
Sbjct: 1684 PHYSPSSPQYSPSSPHYSPSSPHYSPSSP-QYSP 1716
Score = 103 bits (257), Expect = 1e-20
Identities = 56/94 (59%), Positives = 65/94 (69%), Gaps = 12/94 (12%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SPTYSP+SP S SP Y
Sbjct: 1603 SPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSPMY 1662
Query: 437 SPSA-----------GYSPTLPGYSPSSTGQYTP 369
SPS+ YSP+ P YSPSS QY+P
Sbjct: 1663 SPSSPAMSPARAGGVSYSPSSPHYSPSSP-QYSP 1695
Score = 100 bits (248), Expect = 1e-19
Identities = 54/85 (63%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP SP SP YSPTSP YSPTSPSYSPTSPSYSP+SP YSP+SP S SP
Sbjct: 1583 SPRSPSSPGGVAASPG--YSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPT 1640
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1641 YSPTSPTYSPTSPTYSPTSP-MYSP 1664
Score = 99.8 bits (247), Expect = 2e-19
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
YSPS+ +SPA YSP+SP+YSP+SP YSP+SP YSPSSP YSPSSP S +SP Y
Sbjct: 1662 YSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQYSPSSPQY 1721
Query: 437 SPSA-GYSPTLPGYSPSS 387
SPS+ YSP+ P YSPSS
Sbjct: 1722 SPSSPAYSPSSPAYSPSS 1739
Score = 95.5 bits (236), Expect = 3e-18
Identities = 53/94 (56%), Positives = 64/94 (68%), Gaps = 12/94 (12%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSP----------NYSPTSPSYSPTSPSYSPSSPTYSPSS 468
S YSP++ SP SP YSP+SP +YSP+SP YSP+SP YSPSSP YSPSS
Sbjct: 1645 SPTYSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHYSPSS 1704
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
P+ S +SP YSPS+ YSP+ P YSPSS Y+P
Sbjct: 1705 PHYSPSSPQYSPSSPQYSPSSPAYSPSSPA-YSP 1737
Score = 91.3 bits (225), Expect = 6e-17
Identities = 43/68 (63%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Frame = -1
Query: 611 IAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
++YSPS+ SP+SP YSP+SP+YSP+SP YSP+SP YSPSSP YSPSSP S +SP YS
Sbjct: 1677 VSYSPSSPHYSPSSPQYSPSSPHYSPSSPHYSPSSPQYSPSSPQYSPSSPAYSPSSPAYS 1736
Query: 434 PSAGYSPT 411
PS+ P+
Sbjct: 1737 PSSPAHPS 1744
Score = 62.4 bits (150), Expect = 3e-08
Identities = 46/116 (39%), Positives = 58/116 (50%), Gaps = 32/116 (27%)
Frame = -1
Query: 620 SPSIAYSPSNARLSP--ASPYSPTSPNYSPTSPSY---------------SPTSPS---- 504
+PS Y+P + SP ASPY + + +PTSP+Y SP S +
Sbjct: 1522 TPSYPYTPIGGQFSPFAASPYGDAAFSPTPTSPAYASPYGTAASPFNAMASPYSRAGNAF 1581
Query: 503 YSPSSPT----------YSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP SP+ YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1582 YSPRSPSSPGGVAASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPA-YSP 1636
[125][TOP]
>UniRef100_A7AWJ0 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7AWJ0_BABBO
Length = 1746
Score = 103 bits (257), Expect = 1e-20
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP YSP
Sbjct: 1602 YSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1661
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 1662 SPAYSPTSPAYSPTSPA-YSP 1681
Score = 101 bits (251), Expect = 6e-20
Identities = 52/86 (60%), Positives = 62/86 (72%), Gaps = 4/86 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1620 SPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1679
Query: 437 SPSA---GYSPTLPGYSPSSTGQYTP 369
SP++ GY PT P Y P+S Y+P
Sbjct: 1680 SPTSPNLGYLPTSPAYRPTSPA-YSP 1704
Score = 96.3 bits (238), Expect = 2e-18
Identities = 53/94 (56%), Positives = 64/94 (68%), Gaps = 10/94 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT--YSPSSPYSSGASP 444
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP Y P+SP SP
Sbjct: 1641 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPNLGYLPTSPAYRPTSP 1700
Query: 443 DYSP-SAGYSPTLPGYSPSS------TGQYTPHE 363
YSP S YSPT P YSP+S + +Y+P +
Sbjct: 1701 AYSPTSPAYSPTSPAYSPTSPVYSPTSPEYSPED 1734
Score = 89.7 bits (221), Expect = 2e-16
Identities = 43/70 (61%), Positives = 51/70 (72%), Gaps = 3/70 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S AYSP++ SP SP Y PTSP Y PTSP+YSPTSP+YSP+SP YSP+SP S SP
Sbjct: 1669 SPAYSPTSPAYSPTSPNLGYLPTSPAYRPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSP 1728
Query: 443 DYSPSAGYSP 414
+YSP +SP
Sbjct: 1729 EYSPEDPFSP 1738
Score = 87.8 bits (216), Expect = 7e-16
Identities = 47/80 (58%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Frame = -1
Query: 602 SPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-S 429
SPS +SP SP YSPTSP Y YSP SP+YSP+SP YSP+SP S SP YSP S
Sbjct: 1575 SPSMGMMSPTSPVYSPTSPVYGQAGGVYSPASPAYSPTSPLYSPTSPVYSPTSPAYSPTS 1634
Query: 428 AGYSPTLPGYSPSSTGQYTP 369
YSPT P YSP+S Y+P
Sbjct: 1635 PAYSPTSPAYSPTSPA-YSP 1653
Score = 87.8 bits (216), Expect = 7e-16
Identities = 49/90 (54%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPN--YSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S AYSP++ SP SP YSPTSPN Y PTSP+Y PTSP+YSP+SP YSP+SP S SP
Sbjct: 1662 SPAYSPTSPAYSPTSPAYSPTSPNLGYLPTSPAYRPTSPAYSPTSPAYSPTSPAYSPTSP 1721
Query: 443 DYSPSAGYSPTLPGYSPSSTGQYTPHEGDK 354
YSPT P YSP P E ++
Sbjct: 1722 ------VYSPTSPEYSPEDPFSPNPFEEEE 1745
Score = 82.4 bits (202), Expect = 3e-14
Identities = 51/96 (53%), Positives = 57/96 (59%), Gaps = 12/96 (12%)
Frame = -1
Query: 620 SPSIAYSPSNARLSP----ASPYSPTSPNYSPTSPSYSPTSP-------SYSPSSPTYSP 474
SP SPS A LSP +P SP+ SPTSP YSPTSP YSP+SP YSP
Sbjct: 1552 SPQSPVSPSYAPLSPNPLSPNPLSPSMGMMSPTSPVYSPTSPVYGQAGGVYSPASPAYSP 1611
Query: 473 SSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1612 TSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPA-YSP 1646
Score = 77.8 bits (190), Expect = 7e-13
Identities = 35/55 (63%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
SP++ Y P++ P SP YSPTSP YSPTSP+YSPTSP YSP+SP YSP P+S
Sbjct: 1683 SPNLGYLPTSPAYRPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPEYSPEDPFS 1737
[126][TOP]
>UniRef100_UPI00006A20E2 DNA-directed RNA polymerase II subunit RPB1 (EC 2.7.7.6) (RNA
polymerase II subunit B1) (DNA-directed RNA polymerase
II subunit A) (DNA-directed RNA polymerase III largest
subunit). n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A20E2
Length = 162
Score = 102 bits (255), Expect = 2e-20
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P++ + SP SP YSPTSP YSPTSP+YSPT+P YSP+SPTYSP+SP + SP YSP
Sbjct: 45 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 104
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S Y+P
Sbjct: 105 SPTYSPTSPKYSPTSP-TYSP 124
Score = 102 bits (254), Expect = 3e-20
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP +P YSPTSP YSPTSP Y+PTSP YSP+SPTYSP+SP S SP YSP+
Sbjct: 66 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 125
Query: 428 ----AGYSPTLPGYSPSS 387
+ YSPT PGYSP+S
Sbjct: 126 SPKGSTYSPTSPGYSPTS 143
Score = 101 bits (251), Expect = 6e-20
Identities = 52/84 (61%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +Y+PS+ SP+SP YSPTSP Y+PTSPSYSP+SP Y+P+SP YSP+SP S SP Y
Sbjct: 7 SPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKY 66
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S Y+P
Sbjct: 67 SPTSPTYSPTTPKYSPTSP-TYSP 89
Score = 100 bits (250), Expect = 7e-20
Identities = 52/84 (61%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP Y+PTSP+YSP+SP Y+PTSP YSP+SP YSP+SP S SP Y
Sbjct: 14 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTY 73
Query: 437 SPSA-GYSPTLPGYSPSSTGQYTP 369
SP+ YSPT P YSP+S YTP
Sbjct: 74 SPTTPKYSPTSPTYSPTSP-VYTP 96
Score = 99.8 bits (247), Expect = 2e-19
Identities = 50/81 (61%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+P + +P+SP YSP+SP+YSPTSP Y+PTSPSYSPSSP Y+P+SP S SP YSP
Sbjct: 3 YTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPT 62
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP +T +Y+P
Sbjct: 63 SPKYSPTSPTYSP-TTPKYSP 82
Score = 98.2 bits (243), Expect = 5e-19
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ + +P SP YSP+SP Y+PTSP YSPTSP YSP+SP YSP+SP S +P Y
Sbjct: 21 SPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKY 80
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P Y+P+S +Y+P
Sbjct: 81 SPTSPTYSPTSPVYTPTSP-KYSP 103
Score = 95.5 bits (236), Expect = 3e-18
Identities = 50/85 (58%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ SP SP Y+PTSP YSPTSP+YSPTSP YSP+SPTYSP+SP S SP S
Sbjct: 80 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSP---TS 136
Query: 428 AGYSPTLPGYSPSSTGQYTPHEGDK 354
GYSPT P YS +S +P + D+
Sbjct: 137 PGYSPTSPTYSLTSPA-ISPDDSDE 160
Score = 92.0 bits (227), Expect = 3e-17
Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPT+P YSPTSP+YSP+SP Y+P+SP S SP YSP
Sbjct: 52 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 111
Query: 431 SAGYSPTLPG----------YSPSSTGQYTP 369
S YSPT P YSP+S G Y+P
Sbjct: 112 SPKYSPTSPTYSPTSPKGSTYSPTSPG-YSP 141
Score = 79.7 bits (195), Expect = 2e-13
Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = -1
Query: 551 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQY 375
P Y+P SPSY+P+SPSYSPSSP+YSP+SP + SP YSPS+ Y+PT P YSP+S +Y
Sbjct: 1 PRYTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSP-KY 59
Query: 374 TP 369
+P
Sbjct: 60 SP 61
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSP---SYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S YSP++ + YSPTSP YSPTSP +YSPTSP YSP+SPTYS +SP SP
Sbjct: 105 SPTYSPTSPK------YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP---AISP 155
Query: 443 DYS 435
D S
Sbjct: 156 DDS 158
[127][TOP]
>UniRef100_Q9XZU9 DNA-directed RNA polymerase n=1 Tax=Drosophila subobscura
RepID=Q9XZU9_DROSU
Length = 1889
Score = 102 bits (255), Expect = 2e-20
Identities = 59/114 (51%), Positives = 68/114 (59%), Gaps = 30/114 (26%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
SP AYSPS+ SP SP YSPTSP+YSP+SPSYSPTSP YSPSSP+YSP+SP + A+P
Sbjct: 1668 SPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATP 1727
Query: 443 DYSPS---------------------AGYSPTLPGYSPSS--------TGQYTP 369
YSP+ A YSPT P YSP S + QYTP
Sbjct: 1728 SYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 99.0 bits (245), Expect = 3e-19
Identities = 51/85 (60%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S YSP NA ++ YSP SP+YSPTSPSYSP+SPSYSP+SP YSPSSP S SP+
Sbjct: 1662 SGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPN 1721
Query: 440 YSPSA-GYSPTLPGYSPSSTGQYTP 369
Y+P+ YSPT P YS S Y+P
Sbjct: 1722 YTPATPSYSPTSPNYSASP--HYSP 1744
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------TSPSYSPSSPTYSPSS 468
Y+P + + SPASP YSPTSP YSP+SP +SP TSP YSP+ YSPSS
Sbjct: 1779 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
S SP Y+P+A YSPT P YSP++ Y+P
Sbjct: 1839 TKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 84.7 bits (208), Expect = 6e-15
Identities = 54/105 (51%), Positives = 64/105 (60%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYS 459
S +YSP++ +PA+P YSPTSPNYS SP YSP SP+ YSP+SPTYSP SP
Sbjct: 1712 SPSYSPTSPNYTPATPSYSPTSPNYS-ASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSY 1770
Query: 458 SGA---------SPDYSP-SAGYSPTLPGYSPSS-----TGQYTP 369
G+ SP YSP S YSPT P YSPSS + QY+P
Sbjct: 1771 DGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Score = 84.7 bits (208), Expect = 6e-15
Identities = 46/89 (51%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSS 456
YSP++ SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 455 GASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S + S YSP + YSPSST +Y+P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 82.0 bits (201), Expect = 4e-14
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSPS+ + SP++ YSPT YS TSP YSP+S YSP+SPTY+P++ S S
Sbjct: 1800 YSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTS 1859
Query: 446 PDYSPSA--GYSPTLPGYSPSS 387
P YSP+A YSPT P YSPSS
Sbjct: 1860 PMYSPTAPSHYSPTSPAYSPSS 1881
Score = 81.6 bits (200), Expect = 5e-14
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Frame = -1
Query: 620 SPSIA--YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SPS++ YSP++ + +SP SPNYSP+SP+YSPTSP Y+ SP Y+ ++P + S
Sbjct: 1572 SPSVSPSYSPTSPNYTASSP-GGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQS 1630
Query: 446 PDYSPSA-GYSPTLPGYSPSSTGQYTP 369
YSPSA GYSPT P YSP+S +P
Sbjct: 1631 TGYSPSASGYSPTSPVYSPTSNFPSSP 1657
Score = 80.1 bits (196), Expect = 1e-13
Identities = 44/89 (49%), Positives = 61/89 (68%), Gaps = 11/89 (12%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-----YSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPS 471
SPS + +PS + PASP YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+
Sbjct: 1557 SPS-SPAPSMSPFYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAP 1615
Query: 470 SPYSSGASPDYSP-SAGYSPTLPGYSPSS 387
SP + +P+++P S GYSP+ GYSP+S
Sbjct: 1616 SPRYASTTPNFNPQSTGYSPSASGYSPTS 1644
Score = 79.7 bits (195), Expect = 2e-13
Identities = 50/100 (50%), Positives = 61/100 (61%), Gaps = 21/100 (21%)
Frame = -1
Query: 605 YSPSNARLSP-ASPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSP 486
++P + SP AS YSPTSP YSPTS PS YSP+S +YSP+SP
Sbjct: 1626 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1685
Query: 485 TYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+YSP+SP S +SP YSP S YSP+ P YSP+S YTP
Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSP-NYTP 1724
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/55 (67%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 465
SP+++ YSPS+ + SP SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 73.6 bits (179), Expect = 1e-11
Identities = 44/107 (41%), Positives = 57/107 (53%), Gaps = 28/107 (26%)
Frame = -1
Query: 605 YSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG- 453
YSPS+ SP SP Y+ T+PN++P S YSP++ YSP+SP YSP+S + S
Sbjct: 1598 YSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSP 1657
Query: 452 ------------------ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+S +YSP S YSPT P YSPSS Y+P
Sbjct: 1658 SFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSP-SYSP 1703
Score = 68.2 bits (165), Expect = 5e-10
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSP 432
YSP+ + SP+S YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP +
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEE 1886
Query: 431 S 429
S
Sbjct: 1887 S 1887
Score = 63.9 bits (154), Expect = 1e-08
Identities = 46/104 (44%), Positives = 57/104 (54%), Gaps = 24/104 (23%)
Frame = -1
Query: 608 AYSPSNAR-LSPASP-YSPTSPNYSPT----------------SPSYSPTSPSYSPS--- 492
++SPS A S SP +SP P SP+ SPSYSPTSP+Y+ S
Sbjct: 1533 SFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPSYSPTSPNYTASSPG 1592
Query: 491 --SPTYSPSSPYSSGASPDY-SPSAGYSPTLPGYSPSSTGQYTP 369
SP YSPSSP S SP Y +PS Y+ T P ++P STG Y+P
Sbjct: 1593 GASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTG-YSP 1635
Score = 62.0 bits (149), Expect = 4e-08
Identities = 47/120 (39%), Positives = 58/120 (48%), Gaps = 40/120 (33%)
Frame = -1
Query: 608 AYSPSNARLSP--ASPYSPTSPNYSPTSPSYSPT----------------SPSYSPSSPT 483
A +P SP AS S SP++SP P SP+ SPSYSP+SP
Sbjct: 1526 AMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPSYSPTSPN 1585
Query: 482 YSPSSPYSSGASPDYSPSA-GYSPTLP---------------------GYSPSSTGQYTP 369
Y+ SSP GASP+YSPS+ YSPT P GYSPS++G Y+P
Sbjct: 1586 YTASSP--GGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASG-YSP 1642
Score = 55.1 bits (131), Expect = 5e-06
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = -1
Query: 572 SPYSPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPT 411
S +P P++SP++ S S SPS+SP+ P SPSSP S ASP SPS YSPT
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPS--YSPT 1582
Query: 410 LPGYSPSSTGQYTPH 366
P Y+ SS G +P+
Sbjct: 1583 SPNYTASSPGGASPN 1597
[128][TOP]
>UniRef100_Q9XZS2 DNA-directed RNA polymerase n=1 Tax=Drosophila madeirensis
RepID=Q9XZS2_DROMD
Length = 1889
Score = 102 bits (255), Expect = 2e-20
Identities = 59/114 (51%), Positives = 68/114 (59%), Gaps = 30/114 (26%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
SP AYSPS+ SP SP YSPTSP+YSP+SPSYSPTSP YSPSSP+YSP+SP + A+P
Sbjct: 1668 SPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATP 1727
Query: 443 DYSPS---------------------AGYSPTLPGYSPSS--------TGQYTP 369
YSP+ A YSPT P YSP S + QYTP
Sbjct: 1728 SYSPTSPNYSASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 99.0 bits (245), Expect = 3e-19
Identities = 51/85 (60%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S YSP NA ++ YSP SP+YSPTSPSYSP+SPSYSP+SP YSPSSP S SP+
Sbjct: 1662 SGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSPN 1721
Query: 440 YSPSA-GYSPTLPGYSPSSTGQYTP 369
Y+P+ YSPT P YS S Y+P
Sbjct: 1722 YTPATPSYSPTSPNYSASP--HYSP 1744
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------TSPSYSPSSPTYSPSS 468
Y+P + + SPASP YSPTSP YSP+SP +SP TSP YSP+ YSPSS
Sbjct: 1779 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
S SP Y+P+A YSPT P YSP++ Y+P
Sbjct: 1839 TKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 84.7 bits (208), Expect = 6e-15
Identities = 54/105 (51%), Positives = 64/105 (60%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYS 459
S +YSP++ +PA+P YSPTSPNYS SP YSP SP+ YSP+SPTYSP SP
Sbjct: 1712 SPSYSPTSPNYTPATPSYSPTSPNYS-ASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSY 1770
Query: 458 SGA---------SPDYSP-SAGYSPTLPGYSPSS-----TGQYTP 369
G+ SP YSP S YSPT P YSPSS + QY+P
Sbjct: 1771 DGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Score = 84.7 bits (208), Expect = 6e-15
Identities = 46/89 (51%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSS 456
YSP++ SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 455 GASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S + S YSP + YSPSST +Y+P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 82.0 bits (201), Expect = 4e-14
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSPS+ + SP++ YSPT YS TSP YSP+S YSP+SPTY+P++ S S
Sbjct: 1800 YSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTS 1859
Query: 446 PDYSPSA--GYSPTLPGYSPSS 387
P YSP+A YSPT P YSPSS
Sbjct: 1860 PMYSPTAPSHYSPTSPAYSPSS 1881
Score = 81.6 bits (200), Expect = 5e-14
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Frame = -1
Query: 620 SPSIA--YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SPS++ YSP++ + +SP SPNYSP+SP+YSPTSP Y+ SP Y+ ++P + S
Sbjct: 1572 SPSVSPSYSPTSPNYTASSP-GGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQS 1630
Query: 446 PDYSPSA-GYSPTLPGYSPSSTGQYTP 369
YSPSA GYSPT P YSP+S +P
Sbjct: 1631 TGYSPSASGYSPTSPVYSPTSNFPSSP 1657
Score = 80.1 bits (196), Expect = 1e-13
Identities = 44/89 (49%), Positives = 61/89 (68%), Gaps = 11/89 (12%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-----YSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPS 471
SPS + +PS + PASP YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+
Sbjct: 1557 SPS-SPAPSMSPFYPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAP 1615
Query: 470 SPYSSGASPDYSP-SAGYSPTLPGYSPSS 387
SP + +P+++P S GYSP+ GYSP+S
Sbjct: 1616 SPRYASTTPNFNPQSTGYSPSASGYSPTS 1644
Score = 79.7 bits (195), Expect = 2e-13
Identities = 50/100 (50%), Positives = 61/100 (61%), Gaps = 21/100 (21%)
Frame = -1
Query: 605 YSPSNARLSP-ASPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSP 486
++P + SP AS YSPTSP YSPTS PS YSP+S +YSP+SP
Sbjct: 1626 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1685
Query: 485 TYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+YSP+SP S +SP YSP S YSP+ P YSP+S YTP
Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPSSPSYSPTSP-NYTP 1724
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/55 (67%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 465
SP+++ YSPS+ + SP SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 73.6 bits (179), Expect = 1e-11
Identities = 44/107 (41%), Positives = 57/107 (53%), Gaps = 28/107 (26%)
Frame = -1
Query: 605 YSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG- 453
YSPS+ SP SP Y+ T+PN++P S YSP++ YSP+SP YSP+S + S
Sbjct: 1598 YSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSP 1657
Query: 452 ------------------ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+S +YSP S YSPT P YSPSS Y+P
Sbjct: 1658 SFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSP-SYSP 1703
Score = 68.2 bits (165), Expect = 5e-10
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSP 432
YSP+ + SP+S YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP +
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEE 1886
Query: 431 S 429
S
Sbjct: 1887 S 1887
Score = 63.9 bits (154), Expect = 1e-08
Identities = 46/104 (44%), Positives = 57/104 (54%), Gaps = 24/104 (23%)
Frame = -1
Query: 608 AYSPSNAR-LSPASP-YSPTSPNYSPT----------------SPSYSPTSPSYSPS--- 492
++SPS A S SP +SP P SP+ SPSYSPTSP+Y+ S
Sbjct: 1533 SFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPSYSPTSPNYTASSPG 1592
Query: 491 --SPTYSPSSPYSSGASPDY-SPSAGYSPTLPGYSPSSTGQYTP 369
SP YSPSSP S SP Y +PS Y+ T P ++P STG Y+P
Sbjct: 1593 GASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTG-YSP 1635
Score = 62.0 bits (149), Expect = 4e-08
Identities = 47/120 (39%), Positives = 58/120 (48%), Gaps = 40/120 (33%)
Frame = -1
Query: 608 AYSPSNARLSP--ASPYSPTSPNYSPTSPSYSPT----------------SPSYSPSSPT 483
A +P SP AS S SP++SP P SP+ SPSYSP+SP
Sbjct: 1526 AMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPSYSPTSPN 1585
Query: 482 YSPSSPYSSGASPDYSPSA-GYSPTLP---------------------GYSPSSTGQYTP 369
Y+ SSP GASP+YSPS+ YSPT P GYSPS++G Y+P
Sbjct: 1586 YTASSP--GGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASG-YSP 1642
Score = 55.1 bits (131), Expect = 5e-06
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = -1
Query: 572 SPYSPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPT 411
S +P P++SP++ S S SPS+SP+ P SPSSP S ASP SPS YSPT
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPS--YSPT 1582
Query: 410 LPGYSPSSTGQYTPH 366
P Y+ SS G +P+
Sbjct: 1583 SPNYTASSPGGASPN 1597
[129][TOP]
>UniRef100_B3NUC1 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NUC1_DROER
Length = 1889
Score = 101 bits (252), Expect = 4e-20
Identities = 52/92 (56%), Positives = 63/92 (68%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SP+ AYSPS+A SP SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P
Sbjct: 1668 SPANAYSPSSANYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTP 1727
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S SP+YS S YSP P YS + +Y+P
Sbjct: 1728 SYSPTSPNYSASPHYSPASPAYSQTGV-KYSP 1758
Score = 97.8 bits (242), Expect = 6e-19
Identities = 50/85 (58%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S YSP+NA ++ YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S SP+
Sbjct: 1662 SGSNIYSPANAYSPSSANYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN 1721
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
Y+P + YSPT P YS S Y+P
Sbjct: 1722 YTPVTPSYSPTSPNYSASP--HYSP 1744
Score = 94.4 bits (233), Expect = 7e-18
Identities = 53/92 (57%), Positives = 64/92 (69%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP+YSPTSP+Y+P +PSYSP+SP YS +SP+ S ASP Y
Sbjct: 1691 SPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPHYSPASPAY 1749
Query: 437 SPS-AGYSPTLPGYSPSS--------TGQYTP 369
S + YSPT P YSP S + QYTP
Sbjct: 1750 SQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 85.5 bits (210), Expect = 3e-15
Identities = 53/103 (51%), Positives = 62/103 (60%), Gaps = 21/103 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPT-----SPN--------------YSPTSPSYSPTSPSYSP 495
S YSPS++ SP SP YSPT SP+ YSP+S +YSP SPSYSP
Sbjct: 1630 STGYSPSSSGYSPTSPVYSPTPHFQSSPSFAGSGSNIYSPANAYSPSSANYSPNSPSYSP 1689
Query: 494 SSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+SP+YSPSSP S SP YSP S YSPT P Y+P T Y+P
Sbjct: 1690 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1731
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/91 (50%), Positives = 56/91 (61%), Gaps = 10/91 (10%)
Frame = -1
Query: 611 IAYSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
+ YSP++ SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y
Sbjct: 1754 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQY 1813
Query: 461 SSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S S + S YSP + YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------TSPSYSPSSPTYSPSS 468
Y+P + + SPASP YSPTSP YSP+SP +SP TSP YSP+ YSPSS
Sbjct: 1779 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
S SP Y+P+A YSPT P YSP++ Y+P
Sbjct: 1839 TKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 83.2 bits (204), Expect = 2e-14
Identities = 53/105 (50%), Positives = 63/105 (60%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYS 459
S +YSP++ +P +P YSPTSPNYS SP YSP SP+ YSP+SPTYSP SP
Sbjct: 1712 SPSYSPTSPNYTPVTPSYSPTSPNYS-ASPHYSPASPAYSQTGVKYSPTSPTYSPPSPSY 1770
Query: 458 SGA---------SPDYSP-SAGYSPTLPGYSPSS-----TGQYTP 369
G+ SP YSP S YSPT P YSPSS + QY+P
Sbjct: 1771 DGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Score = 82.0 bits (201), Expect = 4e-14
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSPS+ + SP++ YSPT YS TSP YSP+S YSP+SPTY+P++ S S
Sbjct: 1800 YSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTS 1859
Query: 446 PDYSPSA--GYSPTLPGYSPSS 387
P YSP+A YSPT P YSPSS
Sbjct: 1860 PMYSPTAPSHYSPTSPAYSPSS 1881
Score = 80.9 bits (198), Expect = 8e-14
Identities = 44/92 (47%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Frame = -1
Query: 617 PSIA-YSPSNARLSPASPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYSS 456
PS++ Y P++ +SP+ YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP +
Sbjct: 1563 PSMSPYFPASPSVSPS--YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYA 1620
Query: 455 GASPDYSP-SAGYSPTLPGYSPSS-TGQYTPH 366
+P+++P S GYSP+ GYSP+S TPH
Sbjct: 1621 STTPNFNPQSTGYSPSSSGYSPTSPVYSPTPH 1652
Score = 76.3 bits (186), Expect = 2e-12
Identities = 53/121 (43%), Positives = 59/121 (48%), Gaps = 42/121 (34%)
Frame = -1
Query: 605 YSPSNARLSPASP----------------------YSPTSPNYSPTSPSYSPT-----SP 507
YSPS+ SP SP YSP+S YSPTSP YSPT SP
Sbjct: 1598 YSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTPHFQSSP 1657
Query: 506 S--------------YSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYT 372
S YSPSS YSP+SP S SP YSPS+ YSPT P YSP+S Y+
Sbjct: 1658 SFAGSGSNIYSPANAYSPSSANYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSP-SYS 1716
Query: 371 P 369
P
Sbjct: 1717 P 1717
Score = 75.1 bits (183), Expect = 4e-12
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIA--YSPSNARLSPASP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SPS++ YSP++ + +SP YSP+SPNYSPTSP Y+ SP Y+ ++P ++P
Sbjct: 1572 SPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQ-- 1629
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S+G SP S+GYSPT P YSP+ Q +P
Sbjct: 1630 -STGYSPS---SSGYSPTSPVYSPTPHFQSSP 1657
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/55 (67%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 465
SP+++ YSPS+ + SP SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 68.6 bits (166), Expect = 4e-10
Identities = 48/104 (46%), Positives = 59/104 (56%), Gaps = 22/104 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S ++SP++ SP+SP SP Y P SPS SPSYSP+SP Y+ SSP GASP+YS
Sbjct: 1546 SPSWSPAHPGSSPSSPGPSMSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYS 1599
Query: 434 PSA-GYSPTLP---------------------GYSPSSTGQYTP 369
PS+ YSPT P GYSPSS+G Y+P
Sbjct: 1600 PSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSSG-YSP 1642
Score = 68.2 bits (165), Expect = 5e-10
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSP 432
YSP+ + SP+S YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP +
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEE 1886
Query: 431 S 429
S
Sbjct: 1887 S 1887
Score = 54.7 bits (130), Expect = 6e-06
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = -1
Query: 572 SPYSPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPT 411
S +P P++SP++ S S SPS+SP+ P SPSSP S ASP SPS YSPT
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPT 1582
Query: 410 LPGYSPSSTGQYTPH 366
P Y+ SS G +P+
Sbjct: 1583 SPNYTASSPGGASPN 1597
[130][TOP]
>UniRef100_Q9C428 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis
macrandra RepID=Q9C428_9FUNG
Length = 1603
Score = 101 bits (252), Expect = 4e-20
Identities = 51/74 (68%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
Frame = -1
Query: 584 LSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPT 411
+SP SP YSPTSP+YSPTSPSY+PTSPSYSP+SP+YSP+SP S SP YSP S YSPT
Sbjct: 1531 ISPTSPGYSPTSPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1590
Query: 410 LPGYSPSSTGQYTP 369
P YSP+S Y+P
Sbjct: 1591 SPSYSPTSP-SYSP 1603
Score = 91.3 bits (225), Expect = 6e-17
Identities = 43/62 (69%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSP++ +P SP YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP Y
Sbjct: 1542 SPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1601
Query: 437 SP 432
SP
Sbjct: 1602 SP 1603
[131][TOP]
>UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MI48_9CHLO
Length = 1694
Score = 101 bits (251), Expect = 6e-20
Identities = 55/96 (57%), Positives = 63/96 (65%), Gaps = 14/96 (14%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP 474
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP
Sbjct: 1546 SPAYSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1605
Query: 473 SSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1606 TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1640
Score = 100 bits (249), Expect = 1e-19
Identities = 54/101 (53%), Positives = 68/101 (67%), Gaps = 11/101 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP Y
Sbjct: 1593 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQY 1652
Query: 437 SPSA----------GYSPTLPGYSPSSTGQYTPHEGDKKDK 345
SP++ SPT P YSP+ G ++P E +K++
Sbjct: 1653 SPTSVGLSDVENAPTRSPTSPQYSPTE-GAFSPMETTEKEE 1692
Score = 97.8 bits (242), Expect = 6e-19
Identities = 57/91 (62%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYS--- 459
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP SP S
Sbjct: 1565 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1624
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSPT P YSP+S QY+P
Sbjct: 1625 SPTSPAYSPTSPAYSPTSPAYSPTSP-QYSP 1654
Score = 88.2 bits (217), Expect = 5e-16
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -1
Query: 566 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS 390
+SPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP + SP YSP S YSPT P YSP+
Sbjct: 1528 FSPTSPGYSPTSPAYSPTSPAYSPTSPAYSPTSP--APTSPAYSPTSPAYSPTSPAYSPT 1585
Query: 389 STGQYTP 369
S Y+P
Sbjct: 1586 SPA-YSP 1591
Score = 86.3 bits (212), Expect = 2e-15
Identities = 53/95 (55%), Positives = 62/95 (65%), Gaps = 14/95 (14%)
Frame = -1
Query: 611 IAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-----YSPSSPTYSP----SSPY 462
+ +SP++ SP SP YSPTSP YSPTSP+YSPTSP+ YSP+SP YSP SP
Sbjct: 1526 MGFSPTSPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPT 1585
Query: 461 S---SGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
S S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1586 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSP 1619
[132][TOP]
>UniRef100_O77165 DNA-directed RNA polymerase (Fragment) n=1 Tax=Breviata anathema
RepID=O77165_9EUKA
Length = 1690
Score = 101 bits (251), Expect = 6e-20
Identities = 53/84 (63%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SPASP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S ASP Y
Sbjct: 1510 SPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAY 1569
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSP P YSP+S Y+P
Sbjct: 1570 SPASPAYSPASPAYSPASPA-YSP 1592
Score = 101 bits (251), Expect = 6e-20
Identities = 53/84 (63%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SPASP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S ASP Y
Sbjct: 1531 SPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAY 1590
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSP P YSP+S Y+P
Sbjct: 1591 SPASPAYSPASPAYSPASPA-YSP 1613
Score = 101 bits (251), Expect = 6e-20
Identities = 53/84 (63%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SPASP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S ASP Y
Sbjct: 1552 SPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAY 1611
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSP P YSP+S Y+P
Sbjct: 1612 SPASPAYSPASPAYSPASPA-YSP 1634
Score = 100 bits (249), Expect = 1e-19
Identities = 54/87 (62%), Positives = 63/87 (72%), Gaps = 3/87 (3%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SP+ A YSP++ SPASP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S AS
Sbjct: 1500 SPAAAGYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPAS 1559
Query: 446 PDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P YSP S YSP P YSP+S Y+P
Sbjct: 1560 PAYSPASPAYSPASPAYSPASPA-YSP 1585
Score = 100 bits (249), Expect = 1e-19
Identities = 51/78 (65%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SPASP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S ASP Y
Sbjct: 1573 SPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAY 1632
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S YSP P YSP+S
Sbjct: 1633 SPASPAYSPASPAYSPAS 1650
Score = 100 bits (248), Expect = 1e-19
Identities = 53/86 (61%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SPASP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP ASP Y
Sbjct: 1601 SPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASPAY 1660
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTPHE 363
SP S YSP P YSP+S Y P E
Sbjct: 1661 SPASPAYSPASPAYSPASPA-YDPAE 1685
Score = 99.8 bits (247), Expect = 2e-19
Identities = 52/84 (61%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SPASP YSP SP YSP SP+YSP SP+YSP+SP YSP+SP S ASP Y
Sbjct: 1594 SPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAY 1653
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
P S YSP P YSP+S Y+P
Sbjct: 1654 GPASPAYSPASPAYSPASPA-YSP 1676
Score = 88.2 bits (217), Expect = 5e-16
Identities = 45/72 (62%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SPASP YSP SP YSP SP+YSP SP+Y P+SP YSP+SP S ASP Y
Sbjct: 1615 SPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPASPAY 1674
Query: 437 SP-SAGYSPTLP 405
SP S Y P P
Sbjct: 1675 SPASPAYDPAEP 1686
Score = 85.1 bits (209), Expect = 4e-15
Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AYSP++ SPASP YSP SP YSP SP+Y P SP+YSP+SP YSP+SP S ASP Y
Sbjct: 1622 SPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPASPAYSPASPAY 1681
Query: 437 SPSAGY 420
P+ Y
Sbjct: 1682 DPAEPY 1687
Score = 82.8 bits (203), Expect = 2e-14
Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = -1
Query: 569 PYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSP 393
P SP + YSP SP+YSP SP+YSP+SP YSP+SP S ASP YSP S YSP P YSP
Sbjct: 1498 PGSPAAAGYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSP 1557
Query: 392 SSTGQYTP 369
+S Y+P
Sbjct: 1558 ASPA-YSP 1564
[133][TOP]
>UniRef100_Q9XZU8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila
pseudoobscura pseudoobscura RepID=Q9XZU8_DROPS
Length = 1811
Score = 100 bits (250), Expect = 7e-20
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SP AYSPS+ SP SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P++P
Sbjct: 1590 SPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATP 1649
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S SP+YS S YSP P YS + +Y+P
Sbjct: 1650 SYSPTSPNYSASPHYSPASPAYSQTG-AKYSP 1680
Score = 97.8 bits (242), Expect = 6e-19
Identities = 50/85 (58%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S YSP NA ++ YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S SP+
Sbjct: 1584 SGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN 1643
Query: 440 YSPSA-GYSPTLPGYSPSSTGQYTP 369
Y+P+ YSPT P YS S Y+P
Sbjct: 1644 YTPATPSYSPTSPNYSASP--HYSP 1666
Score = 95.9 bits (237), Expect = 2e-18
Identities = 54/92 (58%), Positives = 65/92 (70%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP+YSPTSP+Y+P +PSYSP+SP YS +SP+ S ASP Y
Sbjct: 1613 SPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYS-ASPHYSPASPAY 1671
Query: 437 SPS-AGYSPTLPGYSPSS--------TGQYTP 369
S + A YSPT P YSP S + QYTP
Sbjct: 1672 SQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTP 1703
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------TSPSYSPSSPTYSPSS 468
Y+P + + SPASP YSPTSP YSP+SP +SP TSP YSP+ YSPSS
Sbjct: 1701 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1760
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
S SP Y+P+A YSPT P YSP++ Y+P
Sbjct: 1761 TKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1794
Score = 84.7 bits (208), Expect = 6e-15
Identities = 54/105 (51%), Positives = 64/105 (60%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYS 459
S +YSP++ +PA+P YSPTSPNYS SP YSP SP+ YSP+SPTYSP SP
Sbjct: 1634 SPSYSPTSPNYTPATPSYSPTSPNYS-ASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSY 1692
Query: 458 SGA---------SPDYSP-SAGYSPTLPGYSPSS-----TGQYTP 369
G+ SP YSP S YSPT P YSPSS + QY+P
Sbjct: 1693 DGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1737
Score = 84.7 bits (208), Expect = 6e-15
Identities = 46/89 (51%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSS 456
YSP++ SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS
Sbjct: 1678 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1737
Query: 455 GASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S + S YSP + YSPSST +Y+P
Sbjct: 1738 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1765
Score = 82.4 bits (202), Expect = 3e-14
Identities = 44/87 (50%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Frame = -1
Query: 620 SPSIA--YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SPS++ YSP++ + +SP SPNYSP+SP+YSPTSP Y+ +SP Y+ ++P + S
Sbjct: 1494 SPSVSPSYSPTSPNYTASSP-GGASPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQS 1552
Query: 446 PDYSPSA-GYSPTLPGYSPSSTGQYTP 369
YSPSA GYSPT P YSP+S +P
Sbjct: 1553 TGYSPSASGYSPTSPVYSPTSNFPSSP 1579
Score = 82.0 bits (201), Expect = 4e-14
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSPS+ + SP++ YSPT YS TSP YSP+S YSP+SPTY+P++ S S
Sbjct: 1722 YSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTS 1781
Query: 446 PDYSPSA--GYSPTLPGYSPSS 387
P YSP+A YSPT P YSPSS
Sbjct: 1782 PMYSPTAPSHYSPTSPAYSPSS 1803
Score = 81.3 bits (199), Expect = 6e-14
Identities = 51/100 (51%), Positives = 61/100 (61%), Gaps = 21/100 (21%)
Frame = -1
Query: 605 YSPSNARLSP-ASPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSP 486
++P + SP AS YSPTSP YSPTS PS YSP+S +YSP+SP
Sbjct: 1548 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1607
Query: 485 TYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+YSP+SP S +SP YSP S YSPT P YSP+S YTP
Sbjct: 1608 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSP-NYTP 1646
Score = 80.9 bits (198), Expect = 8e-14
Identities = 41/85 (48%), Positives = 63/85 (74%), Gaps = 7/85 (8%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYS 459
+PS++ Y P++ +SP+ YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP
Sbjct: 1484 APSMSPYYPASPSVSPS--YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRY 1541
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSS 387
+ +P+++P S GYSP+ GYSP+S
Sbjct: 1542 ASTTPNFNPQSTGYSPSASGYSPTS 1566
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/55 (67%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 465
SP+++ YSPS+ + SP SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1750 SPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1804
Score = 73.6 bits (179), Expect = 1e-11
Identities = 44/107 (41%), Positives = 57/107 (53%), Gaps = 28/107 (26%)
Frame = -1
Query: 605 YSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG- 453
YSPS+ SP SP Y+ T+PN++P S YSP++ YSP+SP YSP+S + S
Sbjct: 1520 YSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSP 1579
Query: 452 ------------------ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+S +YSP S YSPT P YSPSS Y+P
Sbjct: 1580 SFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSP-SYSP 1625
Score = 68.2 bits (165), Expect = 5e-10
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSP 432
YSP+ + SP+S YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP +
Sbjct: 1749 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEE 1808
Query: 431 S 429
S
Sbjct: 1809 S 1809
Score = 62.4 bits (150), Expect = 3e-08
Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 19/93 (20%)
Frame = -1
Query: 608 AYSPSNARLSP--ASPYSPTSPNYSPTSPSYSPT----------------SPSYSPSSPT 483
A +P SP AS S SP++SP P SP+ SPSYSP+SP
Sbjct: 1448 AMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSPN 1507
Query: 482 YSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSS 387
Y+ SSP GASP+YSPS+ YSPT P Y+ +S
Sbjct: 1508 YTASSP--GGASPNYSPSSPNYSPTSPLYAAAS 1538
Score = 55.1 bits (131), Expect = 5e-06
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = -1
Query: 572 SPYSPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPT 411
S +P P++SP++ S S SPS+SP+ P SPSSP S ASP SPS YSPT
Sbjct: 1447 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPS--YSPT 1504
Query: 410 LPGYSPSSTGQYTPH 366
P Y+ SS G +P+
Sbjct: 1505 SPNYTASSPGGASPN 1519
[134][TOP]
>UniRef100_Q9XZS1 DNA-directed RNA polymerase n=1 Tax=Drosophila guanche
RepID=Q9XZS1_DROGU
Length = 1889
Score = 100 bits (250), Expect = 7e-20
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SP AYSPS+ SP SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P++P
Sbjct: 1668 SPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATP 1727
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S SP+YS S YSP P YS + +Y+P
Sbjct: 1728 SYSPTSPNYSASPHYSPASPAYSQTG-AKYSP 1758
Score = 97.8 bits (242), Expect = 6e-19
Identities = 50/85 (58%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S YSP NA ++ YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S SP+
Sbjct: 1662 SGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN 1721
Query: 440 YSPSA-GYSPTLPGYSPSSTGQYTP 369
Y+P+ YSPT P YS S Y+P
Sbjct: 1722 YTPATPSYSPTSPNYSASP--HYSP 1744
Score = 95.9 bits (237), Expect = 2e-18
Identities = 54/92 (58%), Positives = 65/92 (70%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP+YSPTSP+Y+P +PSYSP+SP YS +SP+ S ASP Y
Sbjct: 1691 SPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYS-ASPHYSPASPAY 1749
Query: 437 SPS-AGYSPTLPGYSPSS--------TGQYTP 369
S + A YSPT P YSP S + QYTP
Sbjct: 1750 SQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------TSPSYSPSSPTYSPSS 468
Y+P + + SPASP YSPTSP YSP+SP +SP TSP YSP+ YSPSS
Sbjct: 1779 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
S SP Y+P+A YSPT P YSP++ Y+P
Sbjct: 1839 TKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 84.7 bits (208), Expect = 6e-15
Identities = 54/105 (51%), Positives = 64/105 (60%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYS 459
S +YSP++ +PA+P YSPTSPNYS SP YSP SP+ YSP+SPTYSP SP
Sbjct: 1712 SPSYSPTSPNYTPATPSYSPTSPNYS-ASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSY 1770
Query: 458 SGA---------SPDYSP-SAGYSPTLPGYSPSS-----TGQYTP 369
G+ SP YSP S YSPT P YSPSS + QY+P
Sbjct: 1771 DGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Score = 84.7 bits (208), Expect = 6e-15
Identities = 46/89 (51%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSS 456
YSP++ SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 455 GASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S + S YSP + YSPSST +Y+P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 82.0 bits (201), Expect = 4e-14
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSPS+ + SP++ YSPT YS TSP YSP+S YSP+SPTY+P++ S S
Sbjct: 1800 YSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTS 1859
Query: 446 PDYSPSA--GYSPTLPGYSPSS 387
P YSP+A YSPT P YSPSS
Sbjct: 1860 PMYSPTAPSHYSPTSPAYSPSS 1881
Score = 81.6 bits (200), Expect = 5e-14
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Frame = -1
Query: 620 SPSIA--YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SPS++ YSP++ + +SP SPNYSP+SP+YSPTSP Y+ SP Y+ ++P + S
Sbjct: 1572 SPSVSPSYSPTSPNYTASSP-GGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQS 1630
Query: 446 PDYSPSA-GYSPTLPGYSPSSTGQYTP 369
YSPSA GYSPT P YSP+S +P
Sbjct: 1631 TGYSPSASGYSPTSPVYSPTSNFPSSP 1657
Score = 81.3 bits (199), Expect = 6e-14
Identities = 51/100 (51%), Positives = 61/100 (61%), Gaps = 21/100 (21%)
Frame = -1
Query: 605 YSPSNARLSP-ASPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSP 486
++P + SP AS YSPTSP YSPTS PS YSP+S +YSP+SP
Sbjct: 1626 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1685
Query: 485 TYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+YSP+SP S +SP YSP S YSPT P YSP+S YTP
Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSP-NYTP 1724
Score = 80.1 bits (196), Expect = 1e-13
Identities = 41/85 (48%), Positives = 62/85 (72%), Gaps = 7/85 (8%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYS 459
+PS++ Y P++ +SP+ YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ SP
Sbjct: 1562 APSMSPYYPASPSVSPS--YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAPSPRY 1619
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSS 387
+ +P+++P S GYSP+ GYSP+S
Sbjct: 1620 ASTTPNFNPQSTGYSPSASGYSPTS 1644
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/55 (67%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 465
SP+++ YSPS+ + SP SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 73.6 bits (179), Expect = 1e-11
Identities = 44/107 (41%), Positives = 57/107 (53%), Gaps = 28/107 (26%)
Frame = -1
Query: 605 YSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG- 453
YSPS+ SP SP Y+ T+PN++P S YSP++ YSP+SP YSP+S + S
Sbjct: 1598 YSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSP 1657
Query: 452 ------------------ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+S +YSP S YSPT P YSPSS Y+P
Sbjct: 1658 SFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSP-SYSP 1703
Score = 68.2 bits (165), Expect = 5e-10
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSP 432
YSP+ + SP+S YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP +
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEE 1886
Query: 431 S 429
S
Sbjct: 1887 S 1887
Score = 63.9 bits (154), Expect = 1e-08
Identities = 46/104 (44%), Positives = 57/104 (54%), Gaps = 24/104 (23%)
Frame = -1
Query: 608 AYSPSNAR-LSPASP-YSPTSPNYSPT----------------SPSYSPTSPSYSPS--- 492
++SPS A S SP +SP P SP+ SPSYSPTSP+Y+ S
Sbjct: 1533 SFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSPNYTASSPG 1592
Query: 491 --SPTYSPSSPYSSGASPDY-SPSAGYSPTLPGYSPSSTGQYTP 369
SP YSPSSP S SP Y +PS Y+ T P ++P STG Y+P
Sbjct: 1593 GASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTG-YSP 1635
Score = 62.0 bits (149), Expect = 4e-08
Identities = 47/120 (39%), Positives = 58/120 (48%), Gaps = 40/120 (33%)
Frame = -1
Query: 608 AYSPSNARLSP--ASPYSPTSPNYSPTSPSYSPT----------------SPSYSPSSPT 483
A +P SP AS S SP++SP P SP+ SPSYSP+SP
Sbjct: 1526 AMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSPN 1585
Query: 482 YSPSSPYSSGASPDYSPSA-GYSPTLP---------------------GYSPSSTGQYTP 369
Y+ SSP GASP+YSPS+ YSPT P GYSPS++G Y+P
Sbjct: 1586 YTASSP--GGASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASG-YSP 1642
Score = 55.1 bits (131), Expect = 5e-06
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = -1
Query: 572 SPYSPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPT 411
S +P P++SP++ S S SPS+SP+ P SPSSP S ASP SPS YSPT
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPS--YSPT 1582
Query: 410 LPGYSPSSTGQYTPH 366
P Y+ SS G +P+
Sbjct: 1583 SPNYTASSPGGASPN 1597
[135][TOP]
>UniRef100_Q29IN2 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q29IN2_DROPS
Length = 1889
Score = 100 bits (250), Expect = 7e-20
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SP AYSPS+ SP SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P++P
Sbjct: 1668 SPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATP 1727
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S SP+YS S YSP P YS + +Y+P
Sbjct: 1728 SYSPTSPNYSASPHYSPASPAYSQTG-AKYSP 1758
Score = 97.8 bits (242), Expect = 6e-19
Identities = 50/85 (58%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S YSP NA ++ YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S SP+
Sbjct: 1662 SGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN 1721
Query: 440 YSPSA-GYSPTLPGYSPSSTGQYTP 369
Y+P+ YSPT P YS S Y+P
Sbjct: 1722 YTPATPSYSPTSPNYSASP--HYSP 1744
Score = 95.9 bits (237), Expect = 2e-18
Identities = 54/92 (58%), Positives = 65/92 (70%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP+YSPTSP+Y+P +PSYSP+SP YS +SP+ S ASP Y
Sbjct: 1691 SPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYS-ASPHYSPASPAY 1749
Query: 437 SPS-AGYSPTLPGYSPSS--------TGQYTP 369
S + A YSPT P YSP S + QYTP
Sbjct: 1750 SQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------TSPSYSPSSPTYSPSS 468
Y+P + + SPASP YSPTSP YSP+SP +SP TSP YSP+ YSPSS
Sbjct: 1779 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
S SP Y+P+A YSPT P YSP++ Y+P
Sbjct: 1839 TKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 84.7 bits (208), Expect = 6e-15
Identities = 54/105 (51%), Positives = 64/105 (60%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYS 459
S +YSP++ +PA+P YSPTSPNYS SP YSP SP+ YSP+SPTYSP SP
Sbjct: 1712 SPSYSPTSPNYTPATPSYSPTSPNYS-ASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSY 1770
Query: 458 SGA---------SPDYSP-SAGYSPTLPGYSPSS-----TGQYTP 369
G+ SP YSP S YSPT P YSPSS + QY+P
Sbjct: 1771 DGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Score = 84.7 bits (208), Expect = 6e-15
Identities = 46/89 (51%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSS 456
YSP++ SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS
Sbjct: 1756 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Query: 455 GASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S + S YSP + YSPSST +Y+P
Sbjct: 1816 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 82.4 bits (202), Expect = 3e-14
Identities = 44/87 (50%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Frame = -1
Query: 620 SPSIA--YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SPS++ YSP++ + +SP SPNYSP+SP+YSPTSP Y+ +SP Y+ ++P + S
Sbjct: 1572 SPSVSPSYSPTSPNYTASSP-GGASPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQS 1630
Query: 446 PDYSPSA-GYSPTLPGYSPSSTGQYTP 369
YSPSA GYSPT P YSP+S +P
Sbjct: 1631 TGYSPSASGYSPTSPVYSPTSNFPSSP 1657
Score = 82.0 bits (201), Expect = 4e-14
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSPS+ + SP++ YSPT YS TSP YSP+S YSP+SPTY+P++ S S
Sbjct: 1800 YSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTS 1859
Query: 446 PDYSPSA--GYSPTLPGYSPSS 387
P YSP+A YSPT P YSPSS
Sbjct: 1860 PMYSPTAPSHYSPTSPAYSPSS 1881
Score = 81.3 bits (199), Expect = 6e-14
Identities = 51/100 (51%), Positives = 61/100 (61%), Gaps = 21/100 (21%)
Frame = -1
Query: 605 YSPSNARLSP-ASPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSP 486
++P + SP AS YSPTSP YSPTS PS YSP+S +YSP+SP
Sbjct: 1626 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1685
Query: 485 TYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+YSP+SP S +SP YSP S YSPT P YSP+S YTP
Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSP-NYTP 1724
Score = 80.9 bits (198), Expect = 8e-14
Identities = 41/85 (48%), Positives = 63/85 (74%), Gaps = 7/85 (8%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYS 459
+PS++ Y P++ +SP+ YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP
Sbjct: 1562 APSMSPYYPASPSVSPS--YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYAAASPRY 1619
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSS 387
+ +P+++P S GYSP+ GYSP+S
Sbjct: 1620 ASTTPNFNPQSTGYSPSASGYSPTS 1644
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/55 (67%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 465
SP+++ YSPS+ + SP SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 73.6 bits (179), Expect = 1e-11
Identities = 44/107 (41%), Positives = 57/107 (53%), Gaps = 28/107 (26%)
Frame = -1
Query: 605 YSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG- 453
YSPS+ SP SP Y+ T+PN++P S YSP++ YSP+SP YSP+S + S
Sbjct: 1598 YSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSP 1657
Query: 452 ------------------ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+S +YSP S YSPT P YSPSS Y+P
Sbjct: 1658 SFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSP-SYSP 1703
Score = 68.2 bits (165), Expect = 5e-10
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSP 432
YSP+ + SP+S YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP +
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEE 1886
Query: 431 S 429
S
Sbjct: 1887 S 1887
Score = 62.4 bits (150), Expect = 3e-08
Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 19/93 (20%)
Frame = -1
Query: 608 AYSPSNARLSP--ASPYSPTSPNYSPTSPSYSPT----------------SPSYSPSSPT 483
A +P SP AS S SP++SP P SP+ SPSYSP+SP
Sbjct: 1526 AMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSPN 1585
Query: 482 YSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSS 387
Y+ SSP GASP+YSPS+ YSPT P Y+ +S
Sbjct: 1586 YTASSP--GGASPNYSPSSPNYSPTSPLYAAAS 1616
Score = 55.1 bits (131), Expect = 5e-06
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = -1
Query: 572 SPYSPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPT 411
S +P P++SP++ S S SPS+SP+ P SPSSP S ASP SPS YSPT
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPS--YSPT 1582
Query: 410 LPGYSPSSTGQYTPH 366
P Y+ SS G +P+
Sbjct: 1583 SPNYTASSPGGASPN 1597
[136][TOP]
>UniRef100_B4H2R8 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4H2R8_DROPE
Length = 1804
Score = 100 bits (250), Expect = 7e-20
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SP AYSPS+ SP SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P++P
Sbjct: 1602 SPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATP 1661
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S SP+YS S YSP P YS + +Y+P
Sbjct: 1662 SYSPTSPNYSASPHYSPASPAYSQTG-AKYSP 1692
Score = 97.8 bits (242), Expect = 6e-19
Identities = 50/85 (58%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S YSP NA ++ YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S SP+
Sbjct: 1596 SGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN 1655
Query: 440 YSPSA-GYSPTLPGYSPSSTGQYTP 369
Y+P+ YSPT P YS S Y+P
Sbjct: 1656 YTPATPSYSPTSPNYSASP--HYSP 1678
Score = 95.9 bits (237), Expect = 2e-18
Identities = 54/92 (58%), Positives = 65/92 (70%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP+YSPTSP+Y+P +PSYSP+SP YS +SP+ S ASP Y
Sbjct: 1625 SPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYS-ASPHYSPASPAY 1683
Query: 437 SPS-AGYSPTLPGYSPSS--------TGQYTP 369
S + A YSPT P YSP S + QYTP
Sbjct: 1684 SQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTP 1715
Score = 84.7 bits (208), Expect = 6e-15
Identities = 54/105 (51%), Positives = 64/105 (60%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYS 459
S +YSP++ +PA+P YSPTSPNYS SP YSP SP+ YSP+SPTYSP SP
Sbjct: 1646 SPSYSPTSPNYTPATPSYSPTSPNYS-ASPHYSPASPAYSQTGAKYSPTSPTYSPPSPSY 1704
Query: 458 SGA---------SPDYSP-SAGYSPTLPGYSPSS-----TGQYTP 369
G+ SP YSP S YSPT P YSPSS + QY+P
Sbjct: 1705 DGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1749
Score = 84.7 bits (208), Expect = 6e-15
Identities = 46/89 (51%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSS 456
YSP++ SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ YS
Sbjct: 1690 YSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1749
Query: 455 GASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S + S YSP + YSPSST +Y+P
Sbjct: 1750 TGSTYSATSPRYSPNMSIYSPSST-KYSP 1777
Score = 81.3 bits (199), Expect = 6e-14
Identities = 51/100 (51%), Positives = 61/100 (61%), Gaps = 21/100 (21%)
Frame = -1
Query: 605 YSPSNARLSP-ASPYSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSP 486
++P + SP AS YSPTSP YSPTS PS YSP+S +YSP+SP
Sbjct: 1560 FNPQSTGYSPSASGYSPTSPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSSTNYSPNSP 1619
Query: 485 TYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+YSP+SP S +SP YSP S YSPT P YSP+S YTP
Sbjct: 1620 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSP-NYTP 1658
Score = 80.9 bits (198), Expect = 8e-14
Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S +YSP++ + +SP SPNYSP+SP+YSPTSP Y+ +SP Y+ ++P + S YS
Sbjct: 1510 SPSYSPTSPNYTASSP-GGASPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYS 1568
Query: 434 PSA-GYSPTLPGYSPSSTGQYTP 369
PSA GYSPT P YSP+S +P
Sbjct: 1569 PSASGYSPTSPVYSPTSNFPSSP 1591
Score = 75.9 bits (185), Expect = 3e-12
Identities = 44/87 (50%), Positives = 53/87 (60%), Gaps = 15/87 (17%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------TSPSYSPSSPTYSPSS 468
Y+P + + SPASP YSPTSP YSP+SP +SP TSP YSP+ YSPSS
Sbjct: 1713 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1772
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPS 390
S SP Y+P+A YSPT YSP+
Sbjct: 1773 TKYSPTSPTYTPTARNYSPTSLMYSPT 1799
Score = 73.6 bits (179), Expect = 1e-11
Identities = 44/107 (41%), Positives = 57/107 (53%), Gaps = 28/107 (26%)
Frame = -1
Query: 605 YSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG- 453
YSPS+ SP SP Y+ T+PN++P S YSP++ YSP+SP YSP+S + S
Sbjct: 1532 YSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPTSNFPSSP 1591
Query: 452 ------------------ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+S +YSP S YSPT P YSPSS Y+P
Sbjct: 1592 SFAGSGSNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSP-SYSP 1637
Score = 64.7 bits (156), Expect = 6e-09
Identities = 44/89 (49%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTS---PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 453
SPS SP + + +P SP YSP S SPTSP YSP+SP +SPS+ YSP+ S
Sbjct: 1701 SPSYDGSPGSPQYTPGSPQYSPASPKY---SPTSPLYSPSSPQHSPSN-QYSPTGSTYSA 1756
Query: 452 ASPDYSPSAG-YSPTLPGYSPSSTGQYTP 369
SP YSP+ YSP+ YSP+S YTP
Sbjct: 1757 TSPRYSPNMSIYSPSSTKYSPTSP-TYTP 1784
Score = 57.4 bits (137), Expect = 9e-07
Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = -1
Query: 533 SPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSS 387
+P +P SPSYSP+SP Y+ SSP GASP+YSPS+ YSPT P Y+ +S
Sbjct: 1503 TPPMTPVSPSYSPTSPNYTASSP--GGASPNYSPSSPNYSPTSPLYAAAS 1550
[137][TOP]
>UniRef100_B4R347 RNA polymerase II 215kD subunit n=1 Tax=Drosophila simulans
RepID=B4R347_DROSI
Length = 552
Score = 100 bits (249), Expect = 1e-19
Identities = 52/85 (61%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S YSP NA +S YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S SP+
Sbjct: 325 SGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN 384
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
Y+P + YSPT P YS S QY+P
Sbjct: 385 YTPVTPSYSPTSPNYSASP--QYSP 407
Score = 100 bits (248), Expect = 1e-19
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SP AYSPS++ SP SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P
Sbjct: 331 SPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTP 390
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S SP+YS S YSP P YS + +Y+P
Sbjct: 391 SYSPTSPNYSASPQYSPASPAYSQTGV-KYSP 421
Score = 93.2 bits (230), Expect = 2e-17
Identities = 53/92 (57%), Positives = 63/92 (68%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP+YSPTSP+Y+P +PSYSP+SP YS +SP S ASP Y
Sbjct: 354 SPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPASPAY 412
Query: 437 SPS-AGYSPTLPGYSPSS--------TGQYTP 369
S + YSPT P YSP S + QYTP
Sbjct: 413 SQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 444
Score = 85.5 bits (210), Expect = 3e-15
Identities = 53/103 (51%), Positives = 62/103 (60%), Gaps = 21/103 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPT-----SPN--------------YSPTSPSYSPTSPSYSP 495
S YSPS++ SP SP YSPT SP+ YSP+S +YSP SPSYSP
Sbjct: 293 STGYSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSP 352
Query: 494 SSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+SP+YSPSSP S SP YSP S YSPT P Y+P T Y+P
Sbjct: 353 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 394
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/91 (50%), Positives = 56/91 (61%), Gaps = 10/91 (10%)
Frame = -1
Query: 611 IAYSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
+ YSP++ SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y
Sbjct: 417 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQY 476
Query: 461 SSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S S + S YSP + YSPSST +Y+P
Sbjct: 477 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 506
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------TSPSYSPSSPTYSPSS 468
Y+P + + SPASP YSPTSP YSP+SP +SP TSP YSP+ YSPSS
Sbjct: 442 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 501
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
S SP Y+P+A YSPT P YSP++ Y+P
Sbjct: 502 TKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 535
Score = 83.6 bits (205), Expect = 1e-14
Identities = 53/105 (50%), Positives = 63/105 (60%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYS 459
S +YSP++ +P +P YSPTSPNYS SP YSP SP+ YSP+SPTYSP SP
Sbjct: 375 SPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPASPAYSQTGVKYSPTSPTYSPPSPSY 433
Query: 458 SGA---------SPDYSP-SAGYSPTLPGYSPSS-----TGQYTP 369
G+ SP YSP S YSPT P YSPSS + QY+P
Sbjct: 434 DGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 478
Score = 81.6 bits (200), Expect = 5e-14
Identities = 50/100 (50%), Positives = 61/100 (61%), Gaps = 21/100 (21%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPT-----SPS--------------YSPTSPSYSPSSP 486
++P + SP+S YSPTSP YSPT SPS YSP+S +YSP+SP
Sbjct: 289 FNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSP 348
Query: 485 TYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+YSP+SP S +SP YSP S YSPT P YSP+S YTP
Sbjct: 349 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSP-NYTP 387
Score = 79.7 bits (195), Expect = 2e-13
Identities = 43/82 (52%), Positives = 53/82 (64%), Gaps = 9/82 (10%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSPS+ + SP++ YSPT YS TSP YSP+S YSP+SPTY+P++ S S
Sbjct: 463 YSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTS 522
Query: 446 PDYSPSA--GYSPTLPGYSPSS 387
P YSP+A YSP P YSPSS
Sbjct: 523 PMYSPTAPSHYSPKSPAYSPSS 544
Score = 79.0 bits (193), Expect = 3e-13
Identities = 44/97 (45%), Positives = 66/97 (68%), Gaps = 14/97 (14%)
Frame = -1
Query: 617 PSIA-YSPSNARLSPASPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYSS 456
PS++ Y P++ +SP+ YSPTSPNY+ +SP +YSP+SP+YSP+SP Y +SP +
Sbjct: 228 PSMSPYFPASPSVSPS--YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLY--ASPRYA 283
Query: 455 GASPDYSP--------SAGYSPTLPGYSPSSTGQYTP 369
+P+++P S+GYSPT PGYSP++ Q +P
Sbjct: 284 STTPNFNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSP 320
Score = 74.7 bits (182), Expect = 6e-12
Identities = 49/105 (46%), Positives = 59/105 (56%), Gaps = 26/105 (24%)
Frame = -1
Query: 605 YSPSNARLSPASP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-----SSP-- 465
YSPS+ SP SP Y+ T+PN++P S YSP+S YSP+SP YSP SSP
Sbjct: 263 YSPSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSPSF 322
Query: 464 -------YSSG-----ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YS G +S +YSP S YSPT P YSPSS Y+P
Sbjct: 323 AGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSP-SYSP 366
Score = 73.6 bits (179), Expect = 1e-11
Identities = 37/55 (67%), Positives = 45/55 (81%), Gaps = 3/55 (5%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 465
SP+++ YSPS+ + SP SP Y+PT+ NYSPTSP YSPT+PS YSP SP YSPSSP
Sbjct: 491 SPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSSP 545
Score = 69.3 bits (168), Expect = 2e-10
Identities = 48/102 (47%), Positives = 59/102 (57%), Gaps = 20/102 (19%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S ++SP++ SP+SP SP Y P SPS SPSYSP+SP Y+ SSP GASP+YS
Sbjct: 211 SPSWSPAHPGSSPSSPGPSMSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYS 264
Query: 434 PSA-GYSPTLP-------------------GYSPSSTGQYTP 369
PS+ YSPT P GYSPSS+G Y+P
Sbjct: 265 PSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSG-YSP 305
Score = 67.8 bits (164), Expect = 7e-10
Identities = 34/61 (55%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSP 432
YSP+ + SP+S YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP SP S +SP +
Sbjct: 490 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSSPTFEE 549
Query: 431 S 429
S
Sbjct: 550 S 550
Score = 54.7 bits (130), Expect = 6e-06
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = -1
Query: 572 SPYSPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPT 411
S +P P++SP++ S S SPS+SP+ P SPSSP S ASP SPS YSPT
Sbjct: 190 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPT 247
Query: 410 LPGYSPSSTGQYTPH 366
P Y+ SS G +P+
Sbjct: 248 SPNYTASSPGGASPN 262
[138][TOP]
>UniRef100_B4IK28 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
RepID=B4IK28_DROSE
Length = 1887
Score = 100 bits (249), Expect = 1e-19
Identities = 52/85 (61%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S YSP NA +S YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S SP+
Sbjct: 1660 SGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN 1719
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
Y+P + YSPT P YS S QY+P
Sbjct: 1720 YTPVTPSYSPTSPNYSASP--QYSP 1742
Score = 100 bits (248), Expect = 1e-19
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SP AYSPS++ SP SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P
Sbjct: 1666 SPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTP 1725
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S SP+YS S YSP P YS + +Y+P
Sbjct: 1726 SYSPTSPNYSASPQYSPASPAYSQTGV-KYSP 1756
Score = 93.2 bits (230), Expect = 2e-17
Identities = 53/92 (57%), Positives = 63/92 (68%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP+YSPTSP+Y+P +PSYSP+SP YS +SP S ASP Y
Sbjct: 1689 SPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPASPAY 1747
Query: 437 SPS-AGYSPTLPGYSPSS--------TGQYTP 369
S + YSPT P YSP S + QYTP
Sbjct: 1748 SQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1779
Score = 85.5 bits (210), Expect = 3e-15
Identities = 53/103 (51%), Positives = 62/103 (60%), Gaps = 21/103 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPT-----SPN--------------YSPTSPSYSPTSPSYSP 495
S YSPS++ SP SP YSPT SP+ YSP+S +YSP SPSYSP
Sbjct: 1628 STGYSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSP 1687
Query: 494 SSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+SP+YSPSSP S SP YSP S YSPT P Y+P T Y+P
Sbjct: 1688 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1729
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/91 (50%), Positives = 56/91 (61%), Gaps = 10/91 (10%)
Frame = -1
Query: 611 IAYSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
+ YSP++ SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y
Sbjct: 1752 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQY 1811
Query: 461 SSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S S + S YSP + YSPSST +Y+P
Sbjct: 1812 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1841
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------TSPSYSPSSPTYSPSS 468
Y+P + + SPASP YSPTSP YSP+SP +SP TSP YSP+ YSPSS
Sbjct: 1777 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1836
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
S SP Y+P+A YSPT P YSP++ Y+P
Sbjct: 1837 TKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1870
Score = 83.6 bits (205), Expect = 1e-14
Identities = 53/105 (50%), Positives = 63/105 (60%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYS 459
S +YSP++ +P +P YSPTSPNYS SP YSP SP+ YSP+SPTYSP SP
Sbjct: 1710 SPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPASPAYSQTGVKYSPTSPTYSPPSPSY 1768
Query: 458 SGA---------SPDYSP-SAGYSPTLPGYSPSS-----TGQYTP 369
G+ SP YSP S YSPT P YSPSS + QY+P
Sbjct: 1769 DGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1813
Score = 82.0 bits (201), Expect = 4e-14
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSPS+ + SP++ YSPT YS TSP YSP+S YSP+SPTY+P++ S S
Sbjct: 1798 YSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTS 1857
Query: 446 PDYSPSA--GYSPTLPGYSPSS 387
P YSP+A YSPT P YSPSS
Sbjct: 1858 PMYSPTAPSHYSPTSPAYSPSS 1879
Score = 81.6 bits (200), Expect = 5e-14
Identities = 50/100 (50%), Positives = 61/100 (61%), Gaps = 21/100 (21%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPT-----SPS--------------YSPTSPSYSPSSP 486
++P + SP+S YSPTSP YSPT SPS YSP+S +YSP+SP
Sbjct: 1624 FNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSP 1683
Query: 485 TYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+YSP+SP S +SP YSP S YSPT P YSP+S YTP
Sbjct: 1684 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSP-NYTP 1722
Score = 79.0 bits (193), Expect = 3e-13
Identities = 44/97 (45%), Positives = 66/97 (68%), Gaps = 14/97 (14%)
Frame = -1
Query: 617 PSIA-YSPSNARLSPASPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYSS 456
PS++ Y P++ +SP+ YSPTSPNY+ +SP +YSP+SP+YSP+SP Y +SP +
Sbjct: 1563 PSMSPYFPASPSVSPS--YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLY--ASPRYA 1618
Query: 455 GASPDYSP--------SAGYSPTLPGYSPSSTGQYTP 369
+P+++P S+GYSPT PGYSP++ Q +P
Sbjct: 1619 STTPNFNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSP 1655
Score = 74.7 bits (182), Expect = 6e-12
Identities = 49/105 (46%), Positives = 59/105 (56%), Gaps = 26/105 (24%)
Frame = -1
Query: 605 YSPSNARLSPASP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-----SSP-- 465
YSPS+ SP SP Y+ T+PN++P S YSP+S YSP+SP YSP SSP
Sbjct: 1598 YSPSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSPSF 1657
Query: 464 -------YSSG-----ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YS G +S +YSP S YSPT P YSPSS Y+P
Sbjct: 1658 AGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSP-SYSP 1701
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/55 (67%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 465
SP+++ YSPS+ + SP SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1826 SPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1880
Score = 69.3 bits (168), Expect = 2e-10
Identities = 48/102 (47%), Positives = 59/102 (57%), Gaps = 20/102 (19%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S ++SP++ SP+SP SP Y P SPS SPSYSP+SP Y+ SSP GASP+YS
Sbjct: 1546 SPSWSPAHPGSSPSSPGPSMSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYS 1599
Query: 434 PSA-GYSPTLP-------------------GYSPSSTGQYTP 369
PS+ YSPT P GYSPSS+G Y+P
Sbjct: 1600 PSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSG-YSP 1640
Score = 68.2 bits (165), Expect = 5e-10
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSP 432
YSP+ + SP+S YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP +
Sbjct: 1825 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEE 1884
Query: 431 S 429
S
Sbjct: 1885 S 1885
Score = 54.7 bits (130), Expect = 6e-06
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = -1
Query: 572 SPYSPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPT 411
S +P P++SP++ S S SPS+SP+ P SPSSP S ASP SPS YSPT
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPT 1582
Query: 410 LPGYSPSSTGQYTPH 366
P Y+ SS G +P+
Sbjct: 1583 SPNYTASSPGGASPN 1597
[139][TOP]
>UniRef100_A9UNH9 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster
RepID=A9UNH9_DROME
Length = 1887
Score = 100 bits (249), Expect = 1e-19
Identities = 52/85 (61%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S YSP NA +S YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S SP+
Sbjct: 1660 SGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN 1719
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
Y+P + YSPT P YS S QY+P
Sbjct: 1720 YTPVTPSYSPTSPNYSASP--QYSP 1742
Score = 100 bits (248), Expect = 1e-19
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SP AYSPS++ SP SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P
Sbjct: 1666 SPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTP 1725
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S SP+YS S YSP P YS + +Y+P
Sbjct: 1726 SYSPTSPNYSASPQYSPASPAYSQTGV-KYSP 1756
Score = 93.2 bits (230), Expect = 2e-17
Identities = 53/92 (57%), Positives = 63/92 (68%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP+YSPTSP+Y+P +PSYSP+SP YS +SP S ASP Y
Sbjct: 1689 SPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPASPAY 1747
Query: 437 SPS-AGYSPTLPGYSPSS--------TGQYTP 369
S + YSPT P YSP S + QYTP
Sbjct: 1748 SQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1779
Score = 85.5 bits (210), Expect = 3e-15
Identities = 53/103 (51%), Positives = 62/103 (60%), Gaps = 21/103 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPT-----SPN--------------YSPTSPSYSPTSPSYSP 495
S YSPS++ SP SP YSPT SP+ YSP+S +YSP SPSYSP
Sbjct: 1628 STGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSP 1687
Query: 494 SSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+SP+YSPSSP S SP YSP S YSPT P Y+P T Y+P
Sbjct: 1688 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1729
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/91 (50%), Positives = 56/91 (61%), Gaps = 10/91 (10%)
Frame = -1
Query: 611 IAYSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
+ YSP++ SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y
Sbjct: 1752 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQY 1811
Query: 461 SSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S S + S YSP + YSPSST +Y+P
Sbjct: 1812 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1841
Score = 85.1 bits (209), Expect = 4e-15
Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------TSPSYSPSSPTYSPSS 468
Y+P + + SPASP YSPTSP YSP+SP +SP TSP YSP+ YSPSS
Sbjct: 1777 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1836
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
S SP Y+P+A YSPT P YSP++ Y+P
Sbjct: 1837 TKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSP 1870
Score = 83.6 bits (205), Expect = 1e-14
Identities = 53/105 (50%), Positives = 63/105 (60%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYS 459
S +YSP++ +P +P YSPTSPNYS SP YSP SP+ YSP+SPTYSP SP
Sbjct: 1710 SPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPASPAYSQTGVKYSPTSPTYSPPSPSY 1768
Query: 458 SGA---------SPDYSP-SAGYSPTLPGYSPSS-----TGQYTP 369
G+ SP YSP S YSPT P YSPSS + QY+P
Sbjct: 1769 DGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1813
Score = 80.5 bits (197), Expect = 1e-13
Identities = 50/100 (50%), Positives = 61/100 (61%), Gaps = 21/100 (21%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPT-----SPS--------------YSPTSPSYSPSSP 486
++P + SP+S YSPTSP YSPT SPS YSP+S +YSP+SP
Sbjct: 1624 FNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSP 1683
Query: 485 TYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+YSP+SP S +SP YSP S YSPT P YSP+S YTP
Sbjct: 1684 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSP-NYTP 1722
Score = 80.1 bits (196), Expect = 1e-13
Identities = 43/82 (52%), Positives = 53/82 (64%), Gaps = 9/82 (10%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSPS+ + SP++ YSPT YS TSP YSP+S YSP+SPTY+P++ S
Sbjct: 1798 YSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTP 1857
Query: 446 PDYSPSA--GYSPTLPGYSPSS 387
P YSP+A YSPT P YSPSS
Sbjct: 1858 PMYSPTAPSHYSPTSPAYSPSS 1879
Score = 75.5 bits (184), Expect = 3e-12
Identities = 49/105 (46%), Positives = 59/105 (56%), Gaps = 26/105 (24%)
Frame = -1
Query: 605 YSPSNARLSPASP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-----SSP-- 465
YSPS+ SP SP Y+ T+PN++P S YSP+S YSP+SP YSP SSP
Sbjct: 1598 YSPSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSF 1657
Query: 464 -------YSSG-----ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YS G +S +YSP S YSPT P YSPSS Y+P
Sbjct: 1658 AGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSP-SYSP 1701
Score = 75.1 bits (183), Expect = 4e-12
Identities = 41/84 (48%), Positives = 61/84 (72%), Gaps = 7/84 (8%)
Frame = -1
Query: 617 PSIA-YSPSNARLSPASPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYSS 456
PS++ Y P++ +SP+ YSPTSPNY+ +SP +YSP+SP+YSP+SP Y +SP +
Sbjct: 1563 PSMSPYFPASPSVSPS--YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLY--ASPRYA 1618
Query: 455 GASPDYSP-SAGYSPTLPGYSPSS 387
+P+++P S GYSP+ GYSP+S
Sbjct: 1619 STTPNFNPQSTGYSPSSSGYSPTS 1642
Score = 72.0 bits (175), Expect = 4e-11
Identities = 36/55 (65%), Positives = 45/55 (81%), Gaps = 3/55 (5%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 465
SP+++ YSPS+ + SP SP Y+PT+ NYSPT P YSPT+PS YSP+SP YSPSSP
Sbjct: 1826 SPNMSIYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSPTSPAYSPSSP 1880
Score = 69.3 bits (168), Expect = 2e-10
Identities = 48/102 (47%), Positives = 59/102 (57%), Gaps = 20/102 (19%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S ++SP++ SP+SP SP Y P SPS SPSYSP+SP Y+ SSP GASP+YS
Sbjct: 1546 SPSWSPAHPGSSPSSPGPSMSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYS 1599
Query: 434 PSA-GYSPTLP-------------------GYSPSSTGQYTP 369
PS+ YSPT P GYSPSS+G Y+P
Sbjct: 1600 PSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSG-YSP 1640
Score = 66.2 bits (160), Expect = 2e-09
Identities = 33/61 (54%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSP 432
YSP+ + SP+S YSPTSP Y+PT+ +YSPT P YSP++P+ YSP+SP S +SP +
Sbjct: 1825 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSPTSPAYSPSSPTFEE 1884
Query: 431 S 429
S
Sbjct: 1885 S 1885
Score = 54.7 bits (130), Expect = 6e-06
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = -1
Query: 572 SPYSPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPT 411
S +P P++SP++ S S SPS+SP+ P SPSSP S ASP SPS YSPT
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPT 1582
Query: 410 LPGYSPSSTGQYTPH 366
P Y+ SS G +P+
Sbjct: 1583 SPNYTASSPGGASPN 1597
[140][TOP]
>UniRef100_P04052 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Drosophila
melanogaster RepID=RPB1_DROME
Length = 1887
Score = 100 bits (249), Expect = 1e-19
Identities = 52/85 (61%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S YSP NA +S YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S SP+
Sbjct: 1660 SGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN 1719
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
Y+P + YSPT P YS S QY+P
Sbjct: 1720 YTPVTPSYSPTSPNYSASP--QYSP 1742
Score = 100 bits (248), Expect = 1e-19
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SP AYSPS++ SP SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P
Sbjct: 1666 SPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTP 1725
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S SP+YS S YSP P YS + +Y+P
Sbjct: 1726 SYSPTSPNYSASPQYSPASPAYSQTGV-KYSP 1756
Score = 93.2 bits (230), Expect = 2e-17
Identities = 53/92 (57%), Positives = 63/92 (68%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP+YSPTSP+Y+P +PSYSP+SP YS +SP S ASP Y
Sbjct: 1689 SPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPASPAY 1747
Query: 437 SPS-AGYSPTLPGYSPSS--------TGQYTP 369
S + YSPT P YSP S + QYTP
Sbjct: 1748 SQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1779
Score = 85.5 bits (210), Expect = 3e-15
Identities = 53/103 (51%), Positives = 62/103 (60%), Gaps = 21/103 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPT-----SPN--------------YSPTSPSYSPTSPSYSP 495
S YSPS++ SP SP YSPT SP+ YSP+S +YSP SPSYSP
Sbjct: 1628 STGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSP 1687
Query: 494 SSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+SP+YSPSSP S SP YSP S YSPT P Y+P T Y+P
Sbjct: 1688 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1729
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/91 (50%), Positives = 56/91 (61%), Gaps = 10/91 (10%)
Frame = -1
Query: 611 IAYSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
+ YSP++ SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y
Sbjct: 1752 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQY 1811
Query: 461 SSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S S + S YSP + YSPSST +Y+P
Sbjct: 1812 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1841
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------TSPSYSPSSPTYSPSS 468
Y+P + + SPASP YSPTSP YSP+SP +SP TSP YSP+ YSPSS
Sbjct: 1777 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1836
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
S SP Y+P+A YSPT P YSP++ Y+P
Sbjct: 1837 TKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1870
Score = 83.6 bits (205), Expect = 1e-14
Identities = 53/105 (50%), Positives = 63/105 (60%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYS 459
S +YSP++ +P +P YSPTSPNYS SP YSP SP+ YSP+SPTYSP SP
Sbjct: 1710 SPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYSPASPAYSQTGVKYSPTSPTYSPPSPSY 1768
Query: 458 SGA---------SPDYSP-SAGYSPTLPGYSPSS-----TGQYTP 369
G+ SP YSP S YSPT P YSPSS + QY+P
Sbjct: 1769 DGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1813
Score = 82.0 bits (201), Expect = 4e-14
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSPS+ + SP++ YSPT YS TSP YSP+S YSP+SPTY+P++ S S
Sbjct: 1798 YSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTS 1857
Query: 446 PDYSPSA--GYSPTLPGYSPSS 387
P YSP+A YSPT P YSPSS
Sbjct: 1858 PMYSPTAPSHYSPTSPAYSPSS 1879
Score = 80.5 bits (197), Expect = 1e-13
Identities = 50/100 (50%), Positives = 61/100 (61%), Gaps = 21/100 (21%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPT-----SPS--------------YSPTSPSYSPSSP 486
++P + SP+S YSPTSP YSPT SPS YSP+S +YSP+SP
Sbjct: 1624 FNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSP 1683
Query: 485 TYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+YSP+SP S +SP YSP S YSPT P YSP+S YTP
Sbjct: 1684 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSP-NYTP 1722
Score = 75.5 bits (184), Expect = 3e-12
Identities = 49/105 (46%), Positives = 59/105 (56%), Gaps = 26/105 (24%)
Frame = -1
Query: 605 YSPSNARLSPASP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-----SSP-- 465
YSPS+ SP SP Y+ T+PN++P S YSP+S YSP+SP YSP SSP
Sbjct: 1598 YSPSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSF 1657
Query: 464 -------YSSG-----ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YS G +S +YSP S YSPT P YSPSS Y+P
Sbjct: 1658 AGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSP-SYSP 1701
Score = 75.1 bits (183), Expect = 4e-12
Identities = 41/84 (48%), Positives = 61/84 (72%), Gaps = 7/84 (8%)
Frame = -1
Query: 617 PSIA-YSPSNARLSPASPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYSS 456
PS++ Y P++ +SP+ YSPTSPNY+ +SP +YSP+SP+YSP+SP Y +SP +
Sbjct: 1563 PSMSPYFPASPSVSPS--YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLY--ASPRYA 1618
Query: 455 GASPDYSP-SAGYSPTLPGYSPSS 387
+P+++P S GYSP+ GYSP+S
Sbjct: 1619 STTPNFNPQSTGYSPSSSGYSPTS 1642
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/55 (67%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 465
SP+++ YSPS+ + SP SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1826 SPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1880
Score = 69.3 bits (168), Expect = 2e-10
Identities = 48/102 (47%), Positives = 59/102 (57%), Gaps = 20/102 (19%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S ++SP++ SP+SP SP Y P SPS SPSYSP+SP Y+ SSP GASP+YS
Sbjct: 1546 SPSWSPAHPGSSPSSPGPSMSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYS 1599
Query: 434 PSA-GYSPTLP-------------------GYSPSSTGQYTP 369
PS+ YSPT P GYSPSS+G Y+P
Sbjct: 1600 PSSPNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSG-YSP 1640
Score = 68.2 bits (165), Expect = 5e-10
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSP 432
YSP+ + SP+S YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP +
Sbjct: 1825 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEE 1884
Query: 431 S 429
S
Sbjct: 1885 S 1885
Score = 54.7 bits (130), Expect = 6e-06
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = -1
Query: 572 SPYSPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPT 411
S +P P++SP++ S S SPS+SP+ P SPSSP S ASP SPS YSPT
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPT 1582
Query: 410 LPGYSPSSTGQYTPH 366
P Y+ SS G +P+
Sbjct: 1583 SPNYTASSPGGASPN 1597
[141][TOP]
>UniRef100_UPI00017B0A92 UPI00017B0A92 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0A92
Length = 1714
Score = 100 bits (248), Expect = 1e-19
Identities = 55/106 (51%), Positives = 66/106 (62%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP---------- 465
S +YSP++ SP SP PTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP
Sbjct: 1610 SPSYSPTSPSYSPTSPSGPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPPHQLVP 1669
Query: 464 ----------YSSGASPDYSPS----AGYSPTLPGYSPSSTGQYTP 369
YS SP YSP+ + YSPT PGYSP+S Y+P
Sbjct: 1670 TSPYTPHISVYSPPTSPTYSPTSPKGSTYSPTSPGYSPTSP-TYSP 1714
Score = 98.6 bits (244), Expect = 4e-19
Identities = 54/97 (55%), Positives = 62/97 (63%), Gaps = 16/97 (16%)
Frame = -1
Query: 605 YSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YS-------- 459
YSP++ P SP Y+P SP YSPTSPSYSPTSPSYSP+SP+YSP+SP YS
Sbjct: 1570 YSPTSPAYEPRSPGGYTPQSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSGPT 1629
Query: 458 ----SGASPDYSP-SAGYSPTLPGYSPSSTGQYTPHE 363
S SP YSP S YSPT P YSP+S PH+
Sbjct: 1630 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYTPPHQ 1666
Score = 94.7 bits (234), Expect = 5e-18
Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 13/95 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPS------YSPTSPSYSPSSPTYSPSSPYSS 456
S +YSP++ SP SP YSPTSP+YSPTSPS YSPTSPSYSP+SP+YSP+SP S
Sbjct: 1596 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1655
Query: 455 GASPDYS------PSAGYSPTLPGYSPSSTGQYTP 369
SP+Y+ P++ Y+P + YSP ++ Y+P
Sbjct: 1656 PTSPNYTPPHQLVPTSPYTPHISVYSPPTSPTYSP 1690
Score = 86.7 bits (213), Expect = 1e-15
Identities = 52/105 (49%), Positives = 62/105 (59%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPTSPS---------------YSPTSPS 504
S A+SP S PASPY P+ SPNYSPTSP+ YSPTSPS
Sbjct: 1539 SPAWSPTPGSPGSPGPASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPS 1598
Query: 503 YSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
YSP+SP+YSP+SP S SP YSP++ PT P YSP+S Y+P
Sbjct: 1599 YSPTSPSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPTSP-SYSP 1642
Score = 55.8 bits (133), Expect = 3e-06
Identities = 47/90 (52%), Positives = 54/90 (60%), Gaps = 11/90 (12%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT-SPNYSPT--SP-SYSPTSPSYSPS-----SPTYSPSSPYSSG 453
+SPS A S AS +SP SP +SPT SP S P SP Y PS SP YSP+SP
Sbjct: 1523 FSPSAA--SDASGFSPGYSPAWSPTPGSPGSPGPASP-YIPSPGGAMSPNYSPTSPAYEP 1579
Query: 452 ASP-DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y+P S GYSPT P YSP+S Y+P
Sbjct: 1580 RSPGGYTPQSPGYSPTSPSYSPTSP-SYSP 1608
[142][TOP]
>UniRef100_C5Y387 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Y387_SORBI
Length = 1874
Score = 100 bits (248), Expect = 1e-19
Identities = 53/85 (62%), Positives = 61/85 (71%), Gaps = 9/85 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S++YSP++ SP SP YSPTSP YSPTSPSYSP+SPSYSP+SPTYSP+S
Sbjct: 1684 SLSYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPSSPSYSPTSPTYSPTSLGY 1743
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSS 387
S SP YSP S YSPT P YSP+S
Sbjct: 1744 SPTSPGYSPTSPTYSPTSPNYSPTS 1768
Score = 97.4 bits (241), Expect = 8e-19
Identities = 56/93 (60%), Positives = 67/93 (72%), Gaps = 9/93 (9%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-------SSP 465
S S +YSP++A SP SP YSPTSP+YSP S SYSPTSP YSP+SP+YSP +SP
Sbjct: 1654 STSPSYSPASASYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPASLSYSPTSP 1713
Query: 464 YSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
+ S SP YSPS+ YSPT P YSP+S G Y+P
Sbjct: 1714 FYSPTSPSYSPSSPSYSPTSPTYSPTSLG-YSP 1745
Score = 95.1 bits (235), Expect = 4e-18
Identities = 51/86 (59%), Positives = 60/86 (69%), Gaps = 4/86 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S Y+PS+ SP S YSP S +YSPTSP YSPTSPSYSP+S +YSP+SP+ S SP
Sbjct: 1640 SSRYNPSSPSFSPTSTSPSYSPASASYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSP 1699
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSP+S Y+P
Sbjct: 1700 SYSPASLSYSPTSPFYSPTSP-SYSP 1724
Score = 94.4 bits (233), Expect = 7e-18
Identities = 54/86 (62%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
SPS + + ++ SPAS YSPTSP YSPTSPSYSP S SYSP+SP YSP+SP S AS
Sbjct: 1647 SPSFSPTSTSPSYSPASASYSPTSPFYSPTSPSYSPASLSYSPTSPFYSPTSPSYSPASL 1706
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S YSPT P YSPSS Y+P
Sbjct: 1707 SYSPTSPFYSPTSPSYSPSSP-SYSP 1731
Score = 88.2 bits (217), Expect = 5e-16
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTS YSPTSP YSPTSP+YSP+SP YSP+SP + + +Y
Sbjct: 1719 SPSYSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLSYTEY 1778
Query: 437 SPSAGYSPT---------LPGYSPSSTGQYTP 369
+ S YSPT P YSP+S Y+P
Sbjct: 1779 NSSNTYSPTRPRITLDSQAPDYSPTSP-TYSP 1809
Score = 81.6 bits (200), Expect = 5e-14
Identities = 51/118 (43%), Positives = 63/118 (53%), Gaps = 32/118 (27%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------------YSPT---------SPNYSPTSPSYSPTSPS 504
S YSP++ SP SP YSPT +P+YSPTSP+YSPTSPS
Sbjct: 1754 SPTYSPTSPNYSPTSPSYNLSYTEYNSSNTYSPTRPRITLDSQAPDYSPTSPTYSPTSPS 1813
Query: 503 YSPSSPTYSPS---------SPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTPHEGD 357
YS S +YSP+ SP S SP++SP+ SPT YSPSSTGQ +G+
Sbjct: 1814 YSLPSLSYSPNRPTDDSGRPSPDYSPTSPNFSPNRSDSPTAADYSPSSTGQAIEKDGE 1871
Score = 77.8 bits (190), Expect = 7e-13
Identities = 47/95 (49%), Positives = 57/95 (60%), Gaps = 13/95 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYS----------PTSPSYSP--TSPSYSPSSPTYSPS 471
S YSP+ S YS SP Y+ P+SPS+SP TSPSYSP+S +YSP+
Sbjct: 1610 SPVYSPTTPVSSQIQSYSSASPIYNPISPNSSRYNPSSPSFSPTSTSPSYSPASASYSPT 1669
Query: 470 SPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP+ S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1670 SPFYSPTSPSYSPASLSYSPTSPFYSPTSP-SYSP 1703
Score = 74.3 bits (181), Expect = 7e-12
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 5/89 (5%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
+P A SP NA S ++ Y+P SP YSPT+P Y+P SP YSP++P S YSS ASP
Sbjct: 1576 TPYNAASPVNA--STSTSYTPVSPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYSS-ASPI 1632
Query: 440 YSP----SAGYSPTLPGYSPSSTG-QYTP 369
Y+P S+ Y+P+ P +SP+ST Y+P
Sbjct: 1633 YNPISPNSSRYNPSSPSFSPTSTSPSYSP 1661
[143][TOP]
>UniRef100_B4PY98 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PY98_DROYA
Length = 1889
Score = 100 bits (248), Expect = 1e-19
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SP AYSPS++ SP SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P
Sbjct: 1668 SPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTP 1727
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S SP+YS S YSP P YS + +Y+P
Sbjct: 1728 SYSPTSPNYSASPHYSPASPAYSQTGV-KYSP 1758
Score = 98.6 bits (244), Expect = 4e-19
Identities = 51/85 (60%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S YSP NA +S YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S SP+
Sbjct: 1662 SGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN 1721
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
Y+P + YSPT P YS S Y+P
Sbjct: 1722 YTPVTPSYSPTSPNYSASP--HYSP 1744
Score = 94.4 bits (233), Expect = 7e-18
Identities = 53/92 (57%), Positives = 64/92 (69%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP+YSPTSP+Y+P +PSYSP+SP YS +SP+ S ASP Y
Sbjct: 1691 SPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPHYSPASPAY 1749
Query: 437 SPS-AGYSPTLPGYSPSS--------TGQYTP 369
S + YSPT P YSP S + QYTP
Sbjct: 1750 SQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/91 (50%), Positives = 56/91 (61%), Gaps = 10/91 (10%)
Frame = -1
Query: 611 IAYSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
+ YSP++ SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y
Sbjct: 1754 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQY 1813
Query: 461 SSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S S + S YSP + YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------TSPSYSPSSPTYSPSS 468
Y+P + + SPASP YSPTSP YSP+SP +SP TSP YSP+ YSPSS
Sbjct: 1779 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
S SP Y+P+A YSPT P YSP++ Y+P
Sbjct: 1839 TKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 83.2 bits (204), Expect = 2e-14
Identities = 53/105 (50%), Positives = 63/105 (60%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYS 459
S +YSP++ +P +P YSPTSPNYS SP YSP SP+ YSP+SPTYSP SP
Sbjct: 1712 SPSYSPTSPNYTPVTPSYSPTSPNYS-ASPHYSPASPAYSQTGVKYSPTSPTYSPPSPSY 1770
Query: 458 SGA---------SPDYSP-SAGYSPTLPGYSPSS-----TGQYTP 369
G+ SP YSP S YSPT P YSPSS + QY+P
Sbjct: 1771 DGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Score = 82.0 bits (201), Expect = 4e-14
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSPS+ + SP++ YSPT YS TSP YSP+S YSP+SPTY+P++ S S
Sbjct: 1800 YSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTS 1859
Query: 446 PDYSPSA--GYSPTLPGYSPSS 387
P YSP+A YSPT P YSPSS
Sbjct: 1860 PMYSPTAPSHYSPTSPAYSPSS 1881
Score = 80.5 bits (197), Expect = 1e-13
Identities = 50/100 (50%), Positives = 61/100 (61%), Gaps = 21/100 (21%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPT-----SPS--------------YSPTSPSYSPSSP 486
++P + SP+S YSPTSP YSPT SPS YSP+S +YSP+SP
Sbjct: 1626 FNPQSTGYSPSSSGYSPTSPVYSPTPNFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSP 1685
Query: 485 TYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+YSP+SP S +SP YSP S YSPT P YSP+S YTP
Sbjct: 1686 SYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSP-NYTP 1724
Score = 80.1 bits (196), Expect = 1e-13
Identities = 41/84 (48%), Positives = 62/84 (73%), Gaps = 7/84 (8%)
Frame = -1
Query: 617 PSIA-YSPSNARLSPASPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYSS 456
PS++ Y P++ +SP+ YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP +
Sbjct: 1563 PSMSPYFPASPSVSPS--YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYA 1620
Query: 455 GASPDYSP-SAGYSPTLPGYSPSS 387
+P+++P S GYSP+ GYSP+S
Sbjct: 1621 STTPNFNPQSTGYSPSSSGYSPTS 1644
Score = 76.3 bits (186), Expect = 2e-12
Identities = 53/121 (43%), Positives = 59/121 (48%), Gaps = 42/121 (34%)
Frame = -1
Query: 605 YSPSNARLSPASP----------------------YSPTSPNYSPTSPSYSPT-----SP 507
YSPS+ SP SP YSP+S YSPTSP YSPT SP
Sbjct: 1598 YSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTPNFQSSP 1657
Query: 506 S--------------YSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYT 372
S YSPSS YSP+SP S SP YSPS+ YSPT P YSP+S Y+
Sbjct: 1658 SFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSP-SYS 1716
Query: 371 P 369
P
Sbjct: 1717 P 1717
Score = 75.9 bits (185), Expect = 3e-12
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIA--YSPSNARLSPASP------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SPS++ YSP++ + +SP YSP+SPNYSPTSP Y+ SP Y+ ++P ++P
Sbjct: 1572 SPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQ-- 1629
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S+G SP S+GYSPT P YSP+ Q +P
Sbjct: 1630 -STGYSPS---SSGYSPTSPVYSPTPNFQSSP 1657
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/55 (67%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 465
SP+++ YSPS+ + SP SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 68.6 bits (166), Expect = 4e-10
Identities = 48/104 (46%), Positives = 59/104 (56%), Gaps = 22/104 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S ++SP++ SP+SP SP Y P SPS SPSYSP+SP Y+ SSP GASP+YS
Sbjct: 1546 SPSWSPAHPGSSPSSPGPSMSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYS 1599
Query: 434 PSA-GYSPTLP---------------------GYSPSSTGQYTP 369
PS+ YSPT P GYSPSS+G Y+P
Sbjct: 1600 PSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSSG-YSP 1642
Score = 68.2 bits (165), Expect = 5e-10
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSP 432
YSP+ + SP+S YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP +
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEE 1886
Query: 431 S 429
S
Sbjct: 1887 S 1887
Score = 54.7 bits (130), Expect = 6e-06
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = -1
Query: 572 SPYSPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPT 411
S +P P++SP++ S S SPS+SP+ P SPSSP S ASP SPS YSPT
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPT 1582
Query: 410 LPGYSPSSTGQYTPH 366
P Y+ SS G +P+
Sbjct: 1583 SPNYTASSPGGASPN 1597
[144][TOP]
>UniRef100_B4L732 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4L732_DROMO
Length = 1889
Score = 100 bits (248), Expect = 1e-19
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SP AYSPS++ SP SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P
Sbjct: 1668 SPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTP 1727
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S SP+YS S YSP P YS + +Y+P
Sbjct: 1728 SYSPTSPNYSASPHYSPASPAYSQTGV-KYSP 1758
Score = 96.3 bits (238), Expect = 2e-18
Identities = 50/85 (58%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S YSP NA +S YSP SP+YSP SPSYSP+SPSYSP+SP YSP+SP S SP+
Sbjct: 1662 SGSNMYSPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN 1721
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
Y+P + YSPT P YS S Y+P
Sbjct: 1722 YTPVTPSYSPTSPNYSASP--HYSP 1744
Score = 94.4 bits (233), Expect = 7e-18
Identities = 53/92 (57%), Positives = 64/92 (69%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP+YSPTSP+Y+P +PSYSP+SP YS +SP+ S ASP Y
Sbjct: 1691 SPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPHYSPASPAY 1749
Query: 437 SPS-AGYSPTLPGYSPSS--------TGQYTP 369
S + YSPT P YSP S + QYTP
Sbjct: 1750 SQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/91 (50%), Positives = 56/91 (61%), Gaps = 10/91 (10%)
Frame = -1
Query: 611 IAYSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
+ YSP++ SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y
Sbjct: 1754 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQY 1813
Query: 461 SSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S S + S YSP + YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------TSPSYSPSSPTYSPSS 468
Y+P + + SPASP YSPTSP YSP+SP +SP TSP YSP+ YSPSS
Sbjct: 1779 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
S SP Y+P+A YSPT P YSP++ Y+P
Sbjct: 1839 TKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 84.7 bits (208), Expect = 6e-15
Identities = 53/103 (51%), Positives = 61/103 (59%), Gaps = 21/103 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTS-----PN--------------YSPTSPSYSPTSPSYSP 495
S YSPS++ SP SP YSPTS P+ YSP+S +YSP SPSYSP
Sbjct: 1630 STGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSP 1689
Query: 494 SSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP+YSPSSP S SP YSP S YSPT P Y+P T Y+P
Sbjct: 1690 MSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1731
Score = 83.2 bits (204), Expect = 2e-14
Identities = 53/105 (50%), Positives = 63/105 (60%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYS 459
S +YSP++ +P +P YSPTSPNYS SP YSP SP+ YSP+SPTYSP SP
Sbjct: 1712 SPSYSPTSPNYTPVTPSYSPTSPNYS-ASPHYSPASPAYSQTGVKYSPTSPTYSPPSPSY 1770
Query: 458 SGA---------SPDYSP-SAGYSPTLPGYSPSS-----TGQYTP 369
G+ SP YSP S YSPT P YSPSS + QY+P
Sbjct: 1771 DGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Score = 82.0 bits (201), Expect = 4e-14
Identities = 44/97 (45%), Positives = 66/97 (68%), Gaps = 14/97 (14%)
Frame = -1
Query: 617 PSIA-YSPSNARLSPASPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYSS 456
PS++ Y P++ +SP+ YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP +
Sbjct: 1563 PSMSPYFPASPSVSPS--YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASTSPRYA 1620
Query: 455 GASPDYSP--------SAGYSPTLPGYSPSSTGQYTP 369
+P+++P S+GYSPT P YSP+S Q +P
Sbjct: 1621 STTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSP 1657
Score = 82.0 bits (201), Expect = 4e-14
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSPS+ + SP++ YSPT YS TSP YSP+S YSP+SPTY+P++ S S
Sbjct: 1800 YSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTS 1859
Query: 446 PDYSPSA--GYSPTLPGYSPSS 387
P YSP+A YSPT P YSPSS
Sbjct: 1860 PMYSPTAPSHYSPTSPAYSPSS 1881
Score = 79.7 bits (195), Expect = 2e-13
Identities = 50/100 (50%), Positives = 60/100 (60%), Gaps = 21/100 (21%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSP 486
++P + SP+S YSPTSP YSPTS PS YSP+S +YSP+SP
Sbjct: 1626 FNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSP 1685
Query: 485 TYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+YSP SP S +SP YSP S YSPT P YSP+S YTP
Sbjct: 1686 SYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSP-NYTP 1724
Score = 74.7 bits (182), Expect = 6e-12
Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 14/93 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSS-- 456
YSPS+ SP SP Y+ T+PN++P S YSP+S YSP+SP YSP+S + S
Sbjct: 1598 YSPSSPNYSPTSPLYASTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSP 1657
Query: 455 ----GASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S YSP YSP+ YSP+S Y+P
Sbjct: 1658 SFAGSGSNMYSPGNAYSPSSSNYSPNSP-SYSP 1689
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/55 (67%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 465
SP+++ YSPS+ + SP SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 68.6 bits (166), Expect = 4e-10
Identities = 48/104 (46%), Positives = 59/104 (56%), Gaps = 22/104 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S ++SP++ SP+SP SP Y P SPS SPSYSP+SP Y+ SSP GASP+YS
Sbjct: 1546 SPSWSPAHPGSSPSSPGPSMSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYS 1599
Query: 434 PSA-GYSPTLP---------------------GYSPSSTGQYTP 369
PS+ YSPT P GYSPSS+G Y+P
Sbjct: 1600 PSSPNYSPTSPLYASTSPRYASTTPNFNPQSTGYSPSSSG-YSP 1642
Score = 68.2 bits (165), Expect = 5e-10
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSP 432
YSP+ + SP+S YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP +
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEE 1886
Query: 431 S 429
S
Sbjct: 1887 S 1887
Score = 55.1 bits (131), Expect = 5e-06
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYSS-----GASP 444
+SPS S +P P++SP++ S S SPS+SP+ P SPSSP S ASP
Sbjct: 1518 FSPSGH----VSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASP 1573
Query: 443 DYSPSAGYSPTLPGYSPSSTGQYTPH 366
SPS YSPT P Y+ SS G +P+
Sbjct: 1574 SVSPS--YSPTSPNYTASSPGGASPN 1597
[145][TOP]
>UniRef100_B3MQ29 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MQ29_DROAN
Length = 1889
Score = 100 bits (248), Expect = 1e-19
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SP AYSPS++ SP SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P
Sbjct: 1668 SPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTP 1727
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S SP+YS S YSP P YS + +Y+P
Sbjct: 1728 SYSPTSPNYSASPHYSPASPAYSQTGV-KYSP 1758
Score = 98.6 bits (244), Expect = 4e-19
Identities = 51/85 (60%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S YSP NA +S YSP SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S SP+
Sbjct: 1662 SGSNMYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN 1721
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
Y+P + YSPT P YS S Y+P
Sbjct: 1722 YTPVTPSYSPTSPNYSASP--HYSP 1744
Score = 94.4 bits (233), Expect = 7e-18
Identities = 53/92 (57%), Positives = 64/92 (69%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP+YSPTSP+Y+P +PSYSP+SP YS +SP+ S ASP Y
Sbjct: 1691 SPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPHYSPASPAY 1749
Query: 437 SPS-AGYSPTLPGYSPSS--------TGQYTP 369
S + YSPT P YSP S + QYTP
Sbjct: 1750 SQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 85.5 bits (210), Expect = 3e-15
Identities = 53/103 (51%), Positives = 62/103 (60%), Gaps = 21/103 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTS-----PN--------------YSPTSPSYSPTSPSYSP 495
S YSPS++ SP SP YSPTS P+ YSP+S +YSP SPSYSP
Sbjct: 1630 STGYSPSSSGYSPTSPVYSPTSNYQSSPSFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSP 1689
Query: 494 SSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+SP+YSPSSP S SP YSP S YSPT P Y+P T Y+P
Sbjct: 1690 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1731
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/91 (50%), Positives = 56/91 (61%), Gaps = 10/91 (10%)
Frame = -1
Query: 611 IAYSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
+ YSP++ SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y
Sbjct: 1754 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQY 1813
Query: 461 SSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S S + S YSP + YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------TSPSYSPSSPTYSPSS 468
Y+P + + SPASP YSPTSP YSP+SP +SP TSP YSP+ YSPSS
Sbjct: 1779 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
S SP Y+P+A YSPT P YSP++ Y+P
Sbjct: 1839 TKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 83.2 bits (204), Expect = 2e-14
Identities = 53/105 (50%), Positives = 63/105 (60%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYS 459
S +YSP++ +P +P YSPTSPNYS SP YSP SP+ YSP+SPTYSP SP
Sbjct: 1712 SPSYSPTSPNYTPVTPSYSPTSPNYS-ASPHYSPASPAYSQTGVKYSPTSPTYSPPSPSY 1770
Query: 458 SGA---------SPDYSP-SAGYSPTLPGYSPSS-----TGQYTP 369
G+ SP YSP S YSPT P YSPSS + QY+P
Sbjct: 1771 DGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Score = 82.0 bits (201), Expect = 4e-14
Identities = 44/97 (45%), Positives = 66/97 (68%), Gaps = 14/97 (14%)
Frame = -1
Query: 617 PSIA-YSPSNARLSPASPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYSS 456
PS++ Y P++ +SP+ YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +SP +
Sbjct: 1563 PSMSPYFPASPSVSPS--YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYATTSPRYA 1620
Query: 455 GASPDYSP--------SAGYSPTLPGYSPSSTGQYTP 369
+P+++P S+GYSPT P YSP+S Q +P
Sbjct: 1621 STTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNYQSSP 1657
Score = 82.0 bits (201), Expect = 4e-14
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSPS+ + SP++ YSPT YS TSP YSP+S YSP+SPTY+P++ S S
Sbjct: 1800 YSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTS 1859
Query: 446 PDYSPSA--GYSPTLPGYSPSS 387
P YSP+A YSPT P YSPSS
Sbjct: 1860 PMYSPTAPSHYSPTSPAYSPSS 1881
Score = 76.6 bits (187), Expect = 2e-12
Identities = 46/107 (42%), Positives = 57/107 (53%), Gaps = 28/107 (26%)
Frame = -1
Query: 605 YSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG- 453
YSPS+ SP SP Y+ T+PN++P S YSP+S YSP+SP YSP+S Y S
Sbjct: 1598 YSPSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNYQSSP 1657
Query: 452 ------------------ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+S +YSP S YSPT P YSPSS Y+P
Sbjct: 1658 SFAGSGSNMYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSP-SYSP 1703
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/55 (67%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 465
SP+++ YSPS+ + SP SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 71.6 bits (174), Expect = 5e-11
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Frame = -1
Query: 608 AYSPSNA--RLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
A SP A SP+SP YSPTSP Y+ TSP Y+ T+P+++P S YSPSS S SP Y
Sbjct: 1588 ASSPGGASPNYSPSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVY 1647
Query: 437 SPSAGYSPTLPGYSPSSTGQYTP 369
SP++ Y + P ++ S + Y+P
Sbjct: 1648 SPTSNYQSS-PSFAGSGSNMYSP 1669
Score = 68.6 bits (166), Expect = 4e-10
Identities = 48/104 (46%), Positives = 59/104 (56%), Gaps = 22/104 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S ++SP++ SP+SP SP Y P SPS SPSYSP+SP Y+ SSP GASP+YS
Sbjct: 1546 SPSWSPAHPGSSPSSPGPSMSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYS 1599
Query: 434 PSA-GYSPTLP---------------------GYSPSSTGQYTP 369
PS+ YSPT P GYSPSS+G Y+P
Sbjct: 1600 PSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSG-YSP 1642
Score = 68.2 bits (165), Expect = 5e-10
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSP 432
YSP+ + SP+S YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP +
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEE 1886
Query: 431 S 429
S
Sbjct: 1887 S 1887
Score = 54.7 bits (130), Expect = 6e-06
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = -1
Query: 572 SPYSPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPT 411
S +P P++SP++ S S SPS+SP+ P SPSSP S ASP SPS YSPT
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPT 1582
Query: 410 LPGYSPSSTGQYTPH 366
P Y+ SS G +P+
Sbjct: 1583 SPNYTASSPGGASPN 1597
[146][TOP]
>UniRef100_Q84KP6 DNA-directed RNA polymerase n=1 Tax=Cyanidioschyzon merolae
RepID=Q84KP6_CYAME
Length = 1819
Score = 99.8 bits (247), Expect = 2e-19
Identities = 57/90 (63%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Frame = -1
Query: 614 SIAYSPSNARL-SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S AYSP++ RL SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSP+SP S SP
Sbjct: 1633 SPAYSPTSPRLVSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA 1692
Query: 440 YSPSA---GYSPTLP--GYSPSSTG-QYTP 369
YSPS+ YSP+ P YSPSS Y+P
Sbjct: 1693 YSPSSPNVAYSPSSPNVAYSPSSPNVAYSP 1722
Score = 89.7 bits (221), Expect = 2e-16
Identities = 54/88 (61%), Positives = 62/88 (70%), Gaps = 6/88 (6%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSP--TYSPSSPYSSGASP 444
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSPSSP YSPSSP + SP
Sbjct: 1655 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPSSPNVAYSPSSP-NVAYSP 1713
Query: 443 DYSPSAGYSPTLP--GYSPSSTG-QYTP 369
SP+ YSP+ P YSPSS Y+P
Sbjct: 1714 S-SPNVAYSPSSPNVAYSPSSPNVAYSP 1740
Score = 89.0 bits (219), Expect = 3e-16
Identities = 49/94 (52%), Positives = 59/94 (62%), Gaps = 10/94 (10%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNY--------SPTSPSYSPTSPSYSPSSPTYSPSSP 465
+P+ A SP+ +SP+SP Y SPTSP+YSPTSP+YSP+SP YSP+SP
Sbjct: 1611 TPNWAPSPAGGGTGTLGAFSPSSPAYSPTSPRLVSPTSPAYSPTSPAYSPTSPAYSPTSP 1670
Query: 464 YSSGASPDYSP-SAGYSPTLPGYSPSSTG-QYTP 369
S SP YSP S YSPT P YSPSS Y+P
Sbjct: 1671 AYSPTSPAYSPTSPAYSPTSPAYSPSSPNVAYSP 1704
Score = 80.5 bits (197), Expect = 1e-13
Identities = 58/137 (42%), Positives = 68/137 (49%), Gaps = 55/137 (40%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP--------- 465
S AYSP++ SP SP YSPTSP YSPTSP+YSPTSP+YSP+SP YSPSSP
Sbjct: 1648 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPSSPNVAYSPSSP 1707
Query: 464 ------------------------------YS--------SGASPD--YSPSA---GYSP 414
YS S +SP+ YSPS+ YSP
Sbjct: 1708 NVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSP 1767
Query: 413 TLP--GYSPSSTGQYTP 369
+ P YSPSS Y+P
Sbjct: 1768 SSPNVAYSPSSPVAYSP 1784
Score = 77.0 bits (188), Expect = 1e-12
Identities = 55/99 (55%), Positives = 67/99 (67%), Gaps = 15/99 (15%)
Frame = -1
Query: 620 SPSIAYSPS--NARLSPASP---YSPTSPN--YSPTSP--SYSPTSP--SYSPSSP--TY 480
SP++AYSPS N SP+SP YSP+SPN YSP+SP +YSP+SP +YSPSSP Y
Sbjct: 1697 SPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAY 1756
Query: 479 SPSSPYSSGASPDYSPSAGYSPTLP-GYSPSSTG-QYTP 369
SPSSP + SP SP+ YSP+ P YSPSS Y+P
Sbjct: 1757 SPSSP-NVAYSPS-SPNVAYSPSSPVAYSPSSPNVAYSP 1793
Score = 76.6 bits (187), Expect = 2e-12
Identities = 49/85 (57%), Positives = 60/85 (70%), Gaps = 7/85 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPN--YSPTSP--SYSPTSP--SYSPSSP-TYSPSSPY 462
SP++AYSPS SP YSP+SPN YSP+SP +YSP+SP +YSPSSP YSPSSP
Sbjct: 1733 SPNVAYSPS----SPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSSP- 1787
Query: 461 SSGASPDYSPSAGYSPTLPGYSPSS 387
+ SP SP+ YSP+ P +SPSS
Sbjct: 1788 NVAYSPS-SPNVAYSPSSPAFSPSS 1811
Score = 73.6 bits (179), Expect = 1e-11
Identities = 46/75 (61%), Positives = 55/75 (73%), Gaps = 12/75 (16%)
Frame = -1
Query: 620 SPSIAYSPS--NARLSPASP---YSPTSPN--YSPTSP-SYSPTSPS--YSPSSPT--YS 477
SP++AYSPS N SP+SP YSP+SPN YSP+SP +YSP+SP+ YSPSSP YS
Sbjct: 1742 SPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSSPNVAYSPSSPNVAYS 1801
Query: 476 PSSPYSSGASPDYSP 432
PSSP S +SP YSP
Sbjct: 1802 PSSPAFSPSSPVYSP 1816
Score = 67.0 bits (162), Expect = 1e-09
Identities = 36/59 (61%), Positives = 46/59 (77%), Gaps = 8/59 (13%)
Frame = -1
Query: 620 SPSIAYSPS--NARLSPASP--YSPTSPN--YSPTSPS--YSPTSPSYSPSSPTYSPSS 468
SP++AYSPS N SP+SP YSP+SPN YSP+SP+ YSP+SP++SPSSP YSP +
Sbjct: 1760 SPNVAYSPSSPNVAYSPSSPVAYSPSSPNVAYSPSSPNVAYSPSSPAFSPSSPVYSPKN 1818
[147][TOP]
>UniRef100_Q5EXZ8 RNA polymerase II largest subunit (Fragment) n=1 Tax=Periplaneta
americana RepID=Q5EXZ8_PERAM
Length = 97
Score = 99.4 bits (246), Expect = 2e-19
Identities = 51/89 (57%), Positives = 64/89 (71%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASP---------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 453
YSP++ SP+SP YSP+SP+YSPTSP+YSPTSP YSPSS YSP+SP +
Sbjct: 1 YSPTSPSYSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTP 60
Query: 452 ASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
SP+YSPS+ YSP +PGYSP+S Y+P
Sbjct: 61 TSPNYSPSSPTYSPAVPGYSPTSP-TYSP 88
Score = 98.6 bits (244), Expect = 4e-19
Identities = 52/86 (60%), Positives = 62/86 (72%), Gaps = 10/86 (11%)
Frame = -1
Query: 614 SIAYSPSN--------ARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
S +YSPS+ R SP+SP YSPTSP YSPTSP YSP+S YSP+SPTY+P+SP
Sbjct: 5 SPSYSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYTPTSPN 64
Query: 461 SSGASPDYSPSA-GYSPTLPGYSPSS 387
S +SP YSP+ GYSPT P YSP+S
Sbjct: 65 YSPSSPTYSPAVPGYSPTSPTYSPTS 90
Score = 81.6 bits (200), Expect = 5e-14
Identities = 48/80 (60%), Positives = 52/80 (65%), Gaps = 6/80 (7%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSP----TSPSYSPTSPSYSPSSPTYSPSSPYSS 456
S S YSPS+ SP SP YSPTSP YSP YSPTSP+Y+P+SP YSPSSP S
Sbjct: 18 SASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSK----YSPTSPTYTPTSPNYSPSSPTYS 73
Query: 455 GASPDYSP-SAGYSPTLPGY 399
A P YSP S YSPT P Y
Sbjct: 74 PAVPGYSPTSPTYSPTSPAY 93
[148][TOP]
>UniRef100_B4NDK9 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4NDK9_DROWI
Length = 1890
Score = 99.0 bits (245), Expect = 3e-19
Identities = 50/92 (54%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SP AYSPS++ +P SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P +P
Sbjct: 1669 SPGNAYSPSSSNYTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTP 1728
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S SP+YS S YSP P YS + +Y+P
Sbjct: 1729 SYSPTSPNYSASPHYSPASPAYSQTGV-KYSP 1759
Score = 97.4 bits (241), Expect = 8e-19
Identities = 50/85 (58%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S YSP NA +S Y+P SP+YSPTSPSYSP+SPSYSP+SP YSP+SP S SP+
Sbjct: 1663 SGSNMYSPGNAYSPSSSNYTPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN 1722
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
Y+P + YSPT P YS S Y+P
Sbjct: 1723 YTPVTPSYSPTSPNYSASP--HYSP 1745
Score = 94.4 bits (233), Expect = 7e-18
Identities = 53/92 (57%), Positives = 64/92 (69%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP+YSPTSP+Y+P +PSYSP+SP YS +SP+ S ASP Y
Sbjct: 1692 SPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPHYSPASPAY 1750
Query: 437 SPS-AGYSPTLPGYSPSS--------TGQYTP 369
S + YSPT P YSP S + QYTP
Sbjct: 1751 SQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1782
Score = 86.7 bits (213), Expect = 1e-15
Identities = 44/87 (50%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Frame = -1
Query: 620 SPSIA--YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SPS++ YSP++ + +SP SPNYSP+SP+YSPTSP Y+ +SP Y+ ++P + S
Sbjct: 1572 SPSVSPSYSPTSPNYTASSPSGGASPNYSPSSPNYSPTSPLYAATSPRYASTTPNFNLQS 1631
Query: 446 PDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S+GYSPT P YSP+S Q +P
Sbjct: 1632 TGYSPSSSGYSPTSPVYSPTSNFQSSP 1658
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/91 (50%), Positives = 56/91 (61%), Gaps = 10/91 (10%)
Frame = -1
Query: 611 IAYSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
+ YSP++ SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y
Sbjct: 1755 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQY 1814
Query: 461 SSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S S + S YSP + YSPSST +Y+P
Sbjct: 1815 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1844
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------TSPSYSPSSPTYSPSS 468
Y+P + + SPASP YSPTSP YSP+SP +SP TSP YSP+ YSPSS
Sbjct: 1780 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1839
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
S SP Y+P+A YSPT P YSP++ Y+P
Sbjct: 1840 TKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1873
Score = 84.3 bits (207), Expect = 7e-15
Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 21/103 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTS-----PN--------------YSPTSPSYSPTSPSYSP 495
S YSPS++ SP SP YSPTS P+ YSP+S +Y+P SPSYSP
Sbjct: 1631 STGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYTPNSPSYSP 1690
Query: 494 SSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+SP+YSPSSP S SP YSP S YSPT P Y+P T Y+P
Sbjct: 1691 TSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-VTPSYSP 1732
Score = 83.2 bits (204), Expect = 2e-14
Identities = 53/105 (50%), Positives = 63/105 (60%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYS 459
S +YSP++ +P +P YSPTSPNYS SP YSP SP+ YSP+SPTYSP SP
Sbjct: 1713 SPSYSPTSPNYTPVTPSYSPTSPNYS-ASPHYSPASPAYSQTGVKYSPTSPTYSPPSPSY 1771
Query: 458 SGA---------SPDYSP-SAGYSPTLPGYSPSS-----TGQYTP 369
G+ SP YSP S YSPT P YSPSS + QY+P
Sbjct: 1772 DGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1816
Score = 82.0 bits (201), Expect = 4e-14
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSPS+ + SP++ YSPT YS TSP YSP+S YSP+SPTY+P++ S S
Sbjct: 1801 YSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTS 1860
Query: 446 PDYSPSA--GYSPTLPGYSPSS 387
P YSP+A YSPT P YSPSS
Sbjct: 1861 PMYSPTAPSHYSPTSPAYSPSS 1882
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/55 (67%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 465
SP+++ YSPS+ + SP SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1829 SPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1883
Score = 72.4 bits (176), Expect = 3e-11
Identities = 50/104 (48%), Positives = 61/104 (58%), Gaps = 22/104 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S ++SP++ SP+SP SP Y PTSPS SPSYSP+SP Y+ SSP S GASP+YS
Sbjct: 1546 SPSWSPAHPGSSPSSPGPSMSP-YFPTSPS---VSPSYSPTSPNYTASSP-SGGASPNYS 1600
Query: 434 PSA-GYSPTLP---------------------GYSPSSTGQYTP 369
PS+ YSPT P GYSPSS+G Y+P
Sbjct: 1601 PSSPNYSPTSPLYAATSPRYASTTPNFNLQSTGYSPSSSG-YSP 1643
Score = 71.6 bits (174), Expect = 5e-11
Identities = 45/107 (42%), Positives = 58/107 (54%), Gaps = 28/107 (26%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSG- 453
YSPS+ SP SP Y+ TSP Y+ T+P+ YSP+S YSP+SP YSP+S + S
Sbjct: 1599 YSPSSPNYSPTSPLYAATSPRYASTTPNFNLQSTGYSPSSSGYSPTSPVYSPTSNFQSSP 1658
Query: 452 ------------------ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+S +Y+P S YSPT P YSPSS Y+P
Sbjct: 1659 SFAGSGSNMYSPGNAYSPSSSNYTPNSPSYSPTSPSYSPSSP-SYSP 1704
Score = 68.2 bits (165), Expect = 5e-10
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSP 432
YSP+ + SP+S YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP +
Sbjct: 1828 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEE 1887
Query: 431 S 429
S
Sbjct: 1888 S 1888
[149][TOP]
>UniRef100_B4JXA6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4JXA6_DROGR
Length = 1889
Score = 98.6 bits (244), Expect = 4e-19
Identities = 47/79 (59%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
SP AYSPS++ SP SP YSP SP+YSP+SPSYSPTSP YSP+SP+YSP+SP + +P
Sbjct: 1668 SPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTP 1727
Query: 443 DYSPSAGYSPTLPGYSPSS 387
YSP++ P YSP+S
Sbjct: 1728 SYSPTSPNYSASPHYSPAS 1746
Score = 92.4 bits (228), Expect = 3e-17
Identities = 49/85 (57%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S YSP NA +S YSP SP+YSP SPSYSP+SPSYSP+SP YSP+SP S SP
Sbjct: 1662 SGSNLYSPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPK 1721
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTP 369
Y+ + YSPT P YS S Y+P
Sbjct: 1722 YTAVTPSYSPTSPNYSASP--HYSP 1744
Score = 90.9 bits (224), Expect = 8e-17
Identities = 52/92 (56%), Positives = 62/92 (67%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP+YSPTSP Y+ +PSYSP+SP YS +SP+ S ASP Y
Sbjct: 1691 SPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYS-ASPHYSPASPAY 1749
Query: 437 SPS-AGYSPTLPGYSPSS--------TGQYTP 369
S + YSPT P YSP S + QYTP
Sbjct: 1750 SQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/91 (50%), Positives = 56/91 (61%), Gaps = 10/91 (10%)
Frame = -1
Query: 611 IAYSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
+ YSP++ SP SP Y+P SP YSP SP YSPTSP YSPSSP +SPS+ Y
Sbjct: 1754 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQY 1813
Query: 461 SSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S S + S YSP + YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 15/94 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------TSPSYSPSSPTYSPSS 468
Y+P + + SPASP YSPTSP YSP+SP +SP TSP YSP+ YSPSS
Sbjct: 1779 YTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSS 1838
Query: 467 PYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
S SP Y+P+A YSPT P YSP++ Y+P
Sbjct: 1839 TKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 84.3 bits (207), Expect = 7e-15
Identities = 44/87 (50%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Frame = -1
Query: 620 SPSIA--YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SPS++ YSP++ + +SP SPNYSP+SP+YSPTSP Y+ +SP Y+ ++P + S
Sbjct: 1572 SPSVSPSYSPTSPNYTASSP-GGASPNYSPSSPNYSPTSPLYTATSPRYASATPNFNAQS 1630
Query: 446 PDYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP S+GYSPT P YSP+S Q +P
Sbjct: 1631 TGYSPSSSGYSPTSPVYSPTSNFQSSP 1657
Score = 82.0 bits (201), Expect = 4e-14
Identities = 55/112 (49%), Positives = 62/112 (55%), Gaps = 30/112 (26%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPS-------YSPSSPTY 480
S YSP++ SP SP YSPTSPNYS SP YSP SP+ YSP+SPTY
Sbjct: 1705 SPCYSPTSPSYSPTSPKYTAVTPSYSPTSPNYS-ASPHYSPASPAYSQTGVKYSPTSPTY 1763
Query: 479 SPSSPYSSGA---------SPDYSP-SAGYSPTLPGYSPSS-----TGQYTP 369
SP SP G+ SP YSP S YSPT P YSPSS + QY+P
Sbjct: 1764 SPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Score = 82.0 bits (201), Expect = 4e-14
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSPS+ + SP++ YSPT YS TSP YSP+S YSP+SPTY+P++ S S
Sbjct: 1800 YSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTS 1859
Query: 446 PDYSPSA--GYSPTLPGYSPSS 387
P YSP+A YSPT P YSPSS
Sbjct: 1860 PMYSPTAPSHYSPTSPAYSPSS 1881
Score = 81.6 bits (200), Expect = 5e-14
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 21/103 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTS-----PN--------------YSPTSPSYSPTSPSYSP 495
S YSPS++ SP SP YSPTS P+ YSP+S +YSP SPSYSP
Sbjct: 1630 STGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNLYSPGNAYSPSSSNYSPNSPSYSP 1689
Query: 494 SSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP+YSPSSP S SP YSP S YSPT P Y+ + T Y+P
Sbjct: 1690 MSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPKYT-AVTPSYSP 1731
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/55 (67%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 465
SP+++ YSPS+ + SP SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 71.2 bits (173), Expect = 6e-11
Identities = 50/121 (41%), Positives = 58/121 (47%), Gaps = 42/121 (34%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNY--------------SPTSPSYSPTSP------------ 507
YSPS+ SP SP Y+ TSP Y SP+S YSPTSP
Sbjct: 1598 YSPSSPNYSPTSPLYTATSPRYASATPNFNAQSTGYSPSSSGYSPTSPVYSPTSNFQSSP 1657
Query: 506 --------------SYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYT 372
+YSPSS YSP+SP S SP YSPS+ YSPT P YSP+S Y+
Sbjct: 1658 SFAGSGSNLYSPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSP-SYS 1716
Query: 371 P 369
P
Sbjct: 1717 P 1717
Score = 68.6 bits (166), Expect = 4e-10
Identities = 48/104 (46%), Positives = 59/104 (56%), Gaps = 22/104 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S ++SP++ SP+SP SP Y P SPS SPSYSP+SP Y+ SSP GASP+YS
Sbjct: 1546 SPSWSPAHPGSSPSSPGPSMSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYS 1599
Query: 434 PSA-GYSPTLP---------------------GYSPSSTGQYTP 369
PS+ YSPT P GYSPSS+G Y+P
Sbjct: 1600 PSSPNYSPTSPLYTATSPRYASATPNFNAQSTGYSPSSSG-YSP 1642
Score = 68.2 bits (165), Expect = 5e-10
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSP 432
YSP+ + SP+S YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP +
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEE 1886
Query: 431 S 429
S
Sbjct: 1887 S 1887
Score = 54.7 bits (130), Expect = 6e-06
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = -1
Query: 572 SPYSPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPT 411
S +P P++SP++ S S SPS+SP+ P SPSSP S ASP SPS YSPT
Sbjct: 1525 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPT 1582
Query: 410 LPGYSPSSTGQYTPH 366
P Y+ SS G +P+
Sbjct: 1583 SPNYTASSPGGASPN 1597
[150][TOP]
>UniRef100_B4MAN9 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4MAN9_DROVI
Length = 1889
Score = 98.2 bits (243), Expect = 5e-19
Identities = 50/92 (54%), Positives = 62/92 (67%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SP AYSPS++ S SP YSP+SP+YSPTSP YSPTSPSYSP+SP Y+P++P
Sbjct: 1668 SPGNAYSPSSSNYSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATP 1727
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S SP+YS S YSP P YS + +Y+P
Sbjct: 1728 SYSPTSPNYSASPHYSPASPAYSQTGV-KYSP 1758
Score = 94.4 bits (233), Expect = 7e-18
Identities = 53/92 (57%), Positives = 64/92 (69%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S +YSPS+ SP SP YSPTSP+YSPTSP+Y+P +PSYSP+SP YS +SP+ S ASP Y
Sbjct: 1691 SPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYS-ASPHYSPASPAY 1749
Query: 437 SPS-AGYSPTLPGYSPSS--------TGQYTP 369
S + YSPT P YSP S + QYTP
Sbjct: 1750 SQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTP 1781
Score = 93.6 bits (231), Expect = 1e-17
Identities = 49/85 (57%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S S YSP NA +S YS SP+YSP SPSYSP+SPSYSP+SP YSP+SP S SP+
Sbjct: 1662 SGSNMYSPGNAYSPSSSNYSSNSPSYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPN 1721
Query: 440 YSPSA-GYSPTLPGYSPSSTGQYTP 369
Y+P+ YSPT P YS S Y+P
Sbjct: 1722 YTPATPSYSPTSPNYSASP--HYSP 1744
Score = 87.4 bits (215), Expect = 9e-16
Identities = 47/91 (51%), Positives = 57/91 (62%), Gaps = 10/91 (10%)
Frame = -1
Query: 611 IAYSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
+ YSP++ SP SP Y+P SP YSPTSP YSPTSP YSPSSP +SPS+ Y
Sbjct: 1754 VKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQY 1813
Query: 461 SSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S S + S YSP + YSPSST +Y+P
Sbjct: 1814 SPTGSTYSATSPRYSPNMSIYSPSST-KYSP 1843
Score = 85.9 bits (211), Expect = 2e-15
Identities = 50/106 (47%), Positives = 59/106 (55%), Gaps = 22/106 (20%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSP--------------------TSPS 504
SPS SP + + +P SP YSPTSP YSPTSP YSP TSP
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPR 1826
Query: 503 YSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
YSP+ YSPSS S SP Y+P+A YSPT P YSP++ Y+P
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSP 1872
Score = 84.7 bits (208), Expect = 6e-15
Identities = 54/105 (51%), Positives = 64/105 (60%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-------YSPSSPTYSPSSPYS 459
S +YSP++ +PA+P YSPTSPNYS SP YSP SP+ YSP+SPTYSP SP
Sbjct: 1712 SPSYSPTSPNYTPATPSYSPTSPNYS-ASPHYSPASPAYSQTGVKYSPTSPTYSPPSPSY 1770
Query: 458 SGA---------SPDYSP-SAGYSPTLPGYSPSS-----TGQYTP 369
G+ SP YSP S YSPT P YSPSS + QY+P
Sbjct: 1771 DGSPGSPQYTPGSPQYSPTSPKYSPTSPLYSPSSPQHSPSNQYSP 1815
Score = 82.8 bits (203), Expect = 2e-14
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 21/103 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTS-----PN--------------YSPTSPSYSPTSPSYSP 495
S YSPS++ SP SP YSPTS P+ YSP+S +YS SPSYSP
Sbjct: 1630 STGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSSNSPSYSP 1689
Query: 494 SSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP+YSPSSP S SP YSP S YSPT P Y+P +T Y+P
Sbjct: 1690 MSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTP-ATPSYSP 1731
Score = 82.0 bits (201), Expect = 4e-14
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 9/82 (10%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSPS-------YSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSPS+ + SP++ YSPT YS TSP YSP+S YSP+SPTY+P++ S S
Sbjct: 1800 YSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTS 1859
Query: 446 PDYSPSA--GYSPTLPGYSPSS 387
P YSP+A YSPT P YSPSS
Sbjct: 1860 PMYSPTAPSHYSPTSPAYSPSS 1881
Score = 78.6 bits (192), Expect = 4e-13
Identities = 45/97 (46%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSP-----SYSPTSPSYSPSSPTYSPSSPYSS 456
SP + SPS +SP+ YSPTSPNY+ +SP +YSP+SP+YSP+SP Y+ +S +
Sbjct: 1566 SPHFSTSPS---VSPS--YSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSLRYA 1620
Query: 455 GASPDYSP--------SAGYSPTLPGYSPSSTGQYTP 369
A+P+++P S+GYSPT P YSP+S Q +P
Sbjct: 1621 SATPNFNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSP 1657
Score = 76.6 bits (187), Expect = 2e-12
Identities = 49/100 (49%), Positives = 59/100 (59%), Gaps = 21/100 (21%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTS-----PS--------------YSPTSPSYSPSSP 486
++P + SP+S YSPTSP YSPTS PS YSP+S +YS +SP
Sbjct: 1626 FNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSSNSP 1685
Query: 485 TYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+YSP SP S +SP YSP S YSPT P YSP+S YTP
Sbjct: 1686 SYSPMSPSYSPSSPSYSPTSPCYSPTSPSYSPTSP-NYTP 1724
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/55 (67%), Positives = 46/55 (83%), Gaps = 3/55 (5%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPS-YSPSSPTYSPSSP 465
SP+++ YSPS+ + SP SP Y+PT+ NYSPTSP YSPT+PS YSP+SP YSPSSP
Sbjct: 1828 SPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 70.1 bits (170), Expect = 1e-10
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 14/93 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSS-- 456
YSPS+ SP SP Y+ +PN++P S YSP+S YSP+SP YSP+S + S
Sbjct: 1598 YSPSSPNYSPTSPLYTATSLRYASATPNFNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSP 1657
Query: 455 ----GASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S YSP YSP+ YS S++ Y+P
Sbjct: 1658 SFAGSGSNMYSPGNAYSPSSSNYS-SNSPSYSP 1689
Score = 68.9 bits (167), Expect = 3e-10
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 22/104 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S ++SP++ SP+SP SP++S TSPS SPSYSP+SP Y+ SSP GASP+YS
Sbjct: 1546 SPSWSPAHPGSSPSSPGPSMSPHFS-TSPS---VSPSYSPTSPNYTASSP--GGASPNYS 1599
Query: 434 PSA-GYSPTLP---------------------GYSPSSTGQYTP 369
PS+ YSPT P GYSPSS+G Y+P
Sbjct: 1600 PSSPNYSPTSPLYTATSLRYASATPNFNPQSTGYSPSSSG-YSP 1642
Score = 68.2 bits (165), Expect = 5e-10
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT-YSPSSPYSSGASPDYSP 432
YSP+ + SP+S YSPTSP Y+PT+ +YSPTSP YSP++P+ YSP+SP S +SP +
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEE 1886
Query: 431 S 429
S
Sbjct: 1887 S 1887
[151][TOP]
>UniRef100_C6F0A2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0A2_PLAFA
Length = 223
Score = 97.8 bits (242), Expect = 6e-19
Identities = 49/82 (59%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP
Sbjct: 54 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 113
Query: 431 SAGYSPTLPGYSPSSTGQYTPH 366
S YSPT P ++ Y+P+
Sbjct: 114 SPKYSPTSPVAQNIASPNYSPY 135
Score = 93.2 bits (230), Expect = 2e-17
Identities = 50/81 (61%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+ + S SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP
Sbjct: 33 YNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 92
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S YSPT P YSP+S +Y+P
Sbjct: 93 SPKYSPTSPKYSPTSP-KYSP 112
Score = 87.4 bits (215), Expect = 9e-16
Identities = 55/117 (47%), Positives = 65/117 (55%), Gaps = 13/117 (11%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 471
S Y+ +NA SP SP Y+ SP YS TSP YSPTSP YSP+SP YSP+
Sbjct: 5 SPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPT 64
Query: 470 SPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
SP S SP YSP S YSPT P YSP+S +Y+P K T K + K +P
Sbjct: 65 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSP-KYSP-TSPKYSPTSPKYSPTSPKYSP 119
Score = 74.7 bits (182), Expect = 6e-12
Identities = 48/122 (39%), Positives = 60/122 (49%), Gaps = 22/122 (18%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT------------------ 483
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP
Sbjct: 82 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPK 141
Query: 482 YSPSSPYSSGASPDYSPSA---GYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDK 312
+SP+SP S +SP Y S + P P Y S Q + D + + A D+
Sbjct: 142 FSPTSPAYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQDANMFSPIQQAHVDEA 201
Query: 311 GN 306
N
Sbjct: 202 KN 203
[152][TOP]
>UniRef100_C6F1F2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F2_9APIC
Length = 232
Score = 97.1 bits (240), Expect = 1e-18
Identities = 49/82 (59%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP++ + SP SP Y PTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP
Sbjct: 63 YSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 122
Query: 431 SAGYSPTLPGYSPSSTGQYTPH 366
S YSPT P + S+ Y+P+
Sbjct: 123 SPQYSPTSPVPNNPSSPHYSPY 144
Score = 94.4 bits (233), Expect = 7e-18
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 6/79 (7%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-ASPDYSP 432
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP + +SP YSP
Sbjct: 84 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSP 143
Query: 431 ----SAGYSPTLPGYSPSS 387
S +SPT P YS SS
Sbjct: 144 YAIASPKFSPTSPAYSISS 162
Score = 92.0 bits (227), Expect = 3e-17
Identities = 49/73 (67%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Frame = -1
Query: 581 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 408
S SP YSPTSP YSPTSP Y PTSP YSP+SP YSP+SP S SP YSP S YSPT
Sbjct: 57 SVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 116
Query: 407 PGYSPSSTGQYTP 369
P YSP+S QY+P
Sbjct: 117 PKYSPTSP-QYSP 128
Score = 87.0 bits (214), Expect = 1e-15
Identities = 47/73 (64%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Frame = -1
Query: 581 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 408
S SP YS TSP YSPTSP YSPTSP Y P+SP YSP+SP S SP YSP S YSPT
Sbjct: 50 SVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 109
Query: 407 PGYSPSSTGQYTP 369
P YSP+S +Y+P
Sbjct: 110 PKYSPTSP-KYSP 121
Score = 85.5 bits (210), Expect = 3e-15
Identities = 49/82 (59%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S YS ++ + SP SP YSPTSP Y PTSP YSPTSP YSP+SP YSP SP
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSP----T 108
Query: 449 SPDYSP-SAGYSPTLPGYSPSS 387
SP YSP S YSPT P YSP+S
Sbjct: 109 SPKYSPTSPKYSPTSPQYSPTS 130
Score = 80.5 bits (197), Expect = 1e-13
Identities = 47/87 (54%), Positives = 57/87 (65%), Gaps = 8/87 (9%)
Frame = -1
Query: 605 YSPSNAR--LSPASP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSP++ + LS +P +S SP YS TSP YSPTSP YSP+SP Y P+SP S S
Sbjct: 29 YSPTSPKNQLSEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTS 88
Query: 446 PDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P YSP S YSPT P YSP+S +Y+P
Sbjct: 89 PKYSPTSPKYSPTSPKYSPTSP-KYSP 114
Score = 61.2 bits (147), Expect = 7e-08
Identities = 44/112 (39%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Frame = -1
Query: 596 SNARLSPASPYSPTSPNYSPTSPS-------------YSPTSPSYSPSSPTYSPSSPYSS 456
+NA +S + T YSPTSP +S SP YS +SP YSP+SP S
Sbjct: 12 NNANAGGSSGLNDTKAFYSPTSPKNQLSEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYS 71
Query: 455 GASPDYSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
SP Y P S YSPT P YSP+S +Y+P K T K + K +P
Sbjct: 72 PTSPKYLPTSPKYSPTSPKYSPTSP-KYSP-TSPKYSPTSPKYSPTSPKYSP 121
Score = 57.0 bits (136), Expect = 1e-06
Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 19/78 (24%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSP------------------SYSPTSPSYSPSSPT 483
YSP++ + SP SP YSPTSP YSPTSP +SPTSP+YS SSP
Sbjct: 105 YSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISSPV 164
Query: 482 YSPSSPYSSGASPDYSPS 429
Y S + + SP+
Sbjct: 165 YDQSGNARNKSQHPLSPA 182
[153][TOP]
>UniRef100_C6F1E9 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1E9_PLAVI
Length = 225
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 3/74 (4%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSPS
Sbjct: 63 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPS 122
Query: 428 AGY--SPTLPGYSP 393
+ +P+ P YSP
Sbjct: 123 SPVPNNPSSPHYSP 136
Score = 95.5 bits (236), Expect = 3e-18
Identities = 50/79 (63%), Positives = 57/79 (72%), Gaps = 6/79 (7%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-ASPDYSP 432
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSPSSP + +SP YSP
Sbjct: 77 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 136
Query: 431 ----SAGYSPTLPGYSPSS 387
S +SPT P YS SS
Sbjct: 137 YAIASPKFSPTSPAYSISS 155
Score = 90.9 bits (224), Expect = 8e-17
Identities = 49/73 (67%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Frame = -1
Query: 581 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 408
S SP YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP S YSPT
Sbjct: 50 SVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 109
Query: 407 PGYSPSSTGQYTP 369
P YSP+S QY+P
Sbjct: 110 PKYSPTSP-QYSP 121
Score = 82.4 bits (202), Expect = 3e-14
Identities = 48/78 (61%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YS ++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP SP SP Y
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPK---YSP----TSPKY 105
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S YSPT P YSPSS
Sbjct: 106 SPTSPKYSPTSPQYSPSS 123
Score = 81.3 bits (199), Expect = 6e-14
Identities = 47/84 (55%), Positives = 56/84 (66%), Gaps = 6/84 (7%)
Frame = -1
Query: 602 SPSNARLSPASP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
SP+N +L +P +S SP YS TSP YSPTSP YSP+SP YSP+SP S SP Y
Sbjct: 33 SPTN-QLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 91
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S +Y+P
Sbjct: 92 SPTSPKYSPTSPKYSPTSP-KYSP 114
Score = 57.0 bits (136), Expect = 1e-06
Identities = 35/85 (41%), Positives = 41/85 (48%), Gaps = 26/85 (30%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------------------TSPS 504
YSP++ + SP SP YSPTSP YSPTSP YSP TSP+
Sbjct: 91 YSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFSPTSPA 150
Query: 503 YSPSSPTYSPSSPYSSGASPDYSPS 429
YS SSP Y S S + SP+
Sbjct: 151 YSISSPVYDQSGNARSKSQHPLSPA 175
[154][TOP]
>UniRef100_Q9HGZ5 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=Q9HGZ5_ASPOR
Length = 1748
Score = 95.9 bits (237), Expect = 2e-18
Identities = 47/83 (56%), Positives = 61/83 (73%), Gaps = 5/83 (6%)
Frame = -1
Query: 602 SPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-- 432
SP++ SP SP +SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP GA+ SP
Sbjct: 1632 SPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAARHLSPTS 1691
Query: 431 --SAGYSPTLPGYSPSSTGQYTP 369
S Y+PT PG+SP+S Y+P
Sbjct: 1692 PTSPKYTPTSPGWSPTSPQTYSP 1714
Score = 88.6 bits (218), Expect = 4e-16
Identities = 47/97 (48%), Positives = 64/97 (65%), Gaps = 19/97 (19%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSY---SPSSPTYSP 474
SPS +YSP++ ++ SP +SP SP+++PTSP+YSPTSP+Y SP+SP+YSP
Sbjct: 1581 SPSSSYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSP 1640
Query: 473 SSPYSSGASPDYSP--------SAGYSPTLPGYSPSS 387
+SP S SP+YSP S +SPT P YSP+S
Sbjct: 1641 TSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1677
Score = 84.0 bits (206), Expect = 9e-15
Identities = 47/91 (51%), Positives = 60/91 (65%), Gaps = 13/91 (14%)
Frame = -1
Query: 620 SPSIAYS--PSNARLSPASPYSP-------TSPNYSPTSPSYSPTSPSYSPSSPTYSPSS 468
SPS +S P++ SP+S YSP TSP +S TSP +SP SPS++P+SP YSP+S
Sbjct: 1566 SPSSPFSANPTSPGYSPSSSYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSPTS 1625
Query: 467 P---YSSGASPDYSP-SAGYSPTLPGYSPSS 387
P +S SP YSP S G+SPT P YSP+S
Sbjct: 1626 PAYGQASPTSPSYSPTSPGFSPTSPNYSPTS 1656
Score = 73.9 bits (180), Expect = 1e-11
Identities = 42/84 (50%), Positives = 53/84 (63%), Gaps = 5/84 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPA----SPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGA 450
S +YSP++ + A SP SPTSP Y+PTSP +SPTSP +YSP+SP ++ S
Sbjct: 1670 SPSYSPTSPAIGGAARHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFA-----GSPT 1724
Query: 449 SPDYSPSAGYSPTLPGYSPSSTGQ 378
SP S GYSPT P +SPSS Q
Sbjct: 1725 SPGGPTSPGYSPTSPAFSPSSPRQ 1748
Score = 66.2 bits (160), Expect = 2e-09
Identities = 42/80 (52%), Positives = 54/80 (67%), Gaps = 4/80 (5%)
Frame = -1
Query: 596 SNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 423
S A SPA YSP+SP + +PTSP YSP+S SYSP+SP + +SP S SP +SP S
Sbjct: 1556 SPAATSPAG-YSPSSPFSANPTSPGYSPSS-SYSPTSPGMAMTSPRFSMTSPGFSPASPS 1613
Query: 422 YSPTLPGYSPSST--GQYTP 369
++PT P YSP+S GQ +P
Sbjct: 1614 FAPTSPAYSPTSPAYGQASP 1633
Score = 60.1 bits (144), Expect = 1e-07
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSPYSSGASPDYS-P 432
Y P+ SP + + YSP+SP S +PTSP YSPSS +YSP+SP + SP +S
Sbjct: 1545 YQPTGGFGGGFSPAATSPAGYSPSSPFSANPTSPGYSPSS-SYSPTSPGMAMTSPRFSMT 1603
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S G+SP P ++P+S Y+P
Sbjct: 1604 SPGFSPASPSFAPTSPA-YSP 1623
[155][TOP]
>UniRef100_C6F1F1 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F1_PLAVI
Length = 211
Score = 95.5 bits (236), Expect = 3e-18
Identities = 50/79 (63%), Positives = 57/79 (72%), Gaps = 6/79 (7%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-ASPDYSP 432
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSPSSP + +SP YSP
Sbjct: 63 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 122
Query: 431 ----SAGYSPTLPGYSPSS 387
S +SPT P YS SS
Sbjct: 123 YAIASPKFSPTSPAYSISS 141
Score = 84.7 bits (208), Expect = 6e-15
Identities = 43/66 (65%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
Frame = -1
Query: 581 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGY--SPT 411
S SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSPS+ +P+
Sbjct: 57 SVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPS 116
Query: 410 LPGYSP 393
P YSP
Sbjct: 117 SPHYSP 122
Score = 83.2 bits (204), Expect = 2e-14
Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = -1
Query: 581 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 408
S SP YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP S YSP+
Sbjct: 50 SVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSS 109
Query: 407 PGYSPSSTGQYTPH 366
P + S+ Y+P+
Sbjct: 110 PVPNNPSSPHYSPY 123
Score = 81.3 bits (199), Expect = 6e-14
Identities = 46/78 (58%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
Frame = -1
Query: 602 SPSNARLSPASP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
SP+N +L +P +S SP YS TSP YSPTSP YSP+SP YSP+SP S SP Y
Sbjct: 33 SPTN-QLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 91
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S YSPT P YSPSS
Sbjct: 92 SPTSPKYSPTSPQYSPSS 109
Score = 66.6 bits (161), Expect = 2e-09
Identities = 46/108 (42%), Positives = 51/108 (47%), Gaps = 42/108 (38%)
Frame = -1
Query: 566 YSPTSPN---------------------YSPTSPS--------------------YSPTS 510
YSPTSP YSPTSP+ YS TS
Sbjct: 1 YSPTSPTYHLTNPASGGGSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTS 60
Query: 509 PSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P YSP+SP YSP+SP S SP YSP S YSPT P YSP+S QY+P
Sbjct: 61 PKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP-QYSP 107
Score = 57.0 bits (136), Expect = 1e-06
Identities = 35/85 (41%), Positives = 41/85 (48%), Gaps = 26/85 (30%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------------------TSPS 504
YSP++ + SP SP YSPTSP YSPTSP YSP TSP+
Sbjct: 77 YSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFSPTSPA 136
Query: 503 YSPSSPTYSPSSPYSSGASPDYSPS 429
YS SSP Y S S + SP+
Sbjct: 137 YSISSPVYDQSGNARSKSQHPLSPA 161
[156][TOP]
>UniRef100_C6F1F0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F0_PLAVI
Length = 218
Score = 95.5 bits (236), Expect = 3e-18
Identities = 50/79 (63%), Positives = 57/79 (72%), Gaps = 6/79 (7%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-ASPDYSP 432
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSPSSP + +SP YSP
Sbjct: 70 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 129
Query: 431 ----SAGYSPTLPGYSPSS 387
S +SPT P YS SS
Sbjct: 130 YAIASPKFSPTSPAYSISS 148
Score = 92.8 bits (229), Expect = 2e-17
Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YS ++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP Y
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQY 112
Query: 437 SPSAGY--SPTLPGYSP 393
SPS+ +P+ P YSP
Sbjct: 113 SPSSPVPNNPSSPHYSP 129
Score = 82.8 bits (203), Expect = 2e-14
Identities = 48/84 (57%), Positives = 56/84 (66%), Gaps = 6/84 (7%)
Frame = -1
Query: 602 SPSNARLSPASP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
SP+N +L +P +S SP YS TSP YSPTSP YSP+SP YSP+SP S SP Y
Sbjct: 33 SPTN-QLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 91
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTP 369
SP S YSPT P YSP+S QY+P
Sbjct: 92 SPTSPKYSPTSPKYSPTSP-QYSP 114
Score = 77.4 bits (189), Expect = 9e-13
Identities = 46/71 (64%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Frame = -1
Query: 581 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGASPDYSP-SAGY 420
S SP YS TSP YSPTSP YSPTSP YSP+SP YSP SP SP YSP S Y
Sbjct: 50 SVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP----TSPKYSPTSPKY 105
Query: 419 SPTLPGYSPSS 387
SPT P YSPSS
Sbjct: 106 SPTSPQYSPSS 116
Score = 57.0 bits (136), Expect = 1e-06
Identities = 35/85 (41%), Positives = 41/85 (48%), Gaps = 26/85 (30%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------------------TSPS 504
YSP++ + SP SP YSPTSP YSPTSP YSP TSP+
Sbjct: 84 YSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFSPTSPA 143
Query: 503 YSPSSPTYSPSSPYSSGASPDYSPS 429
YS SSP Y S S + SP+
Sbjct: 144 YSISSPVYDQSGNARSKSQHPLSPA 168
[157][TOP]
>UniRef100_A5K7P4 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5K7P4_PLAVI
Length = 2379
Score = 95.5 bits (236), Expect = 3e-18
Identities = 50/79 (63%), Positives = 57/79 (72%), Gaps = 6/79 (7%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-ASPDYSP 432
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSPSSP + +SP YSP
Sbjct: 2231 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSP 2290
Query: 431 ----SAGYSPTLPGYSPSS 387
S +SPT P YS SS
Sbjct: 2291 YAIASPKFSPTSPAYSISS 2309
Score = 84.7 bits (208), Expect = 6e-15
Identities = 43/66 (65%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
Frame = -1
Query: 581 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGY--SPT 411
S SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSPS+ +P+
Sbjct: 2225 SVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPS 2284
Query: 410 LPGYSP 393
P YSP
Sbjct: 2285 SPHYSP 2290
Score = 83.2 bits (204), Expect = 2e-14
Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Frame = -1
Query: 581 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 408
S SP YS TSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP S YSP+
Sbjct: 2218 SVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSS 2277
Query: 407 PGYSPSSTGQYTPH 366
P + S+ Y+P+
Sbjct: 2278 PVPNNPSSPHYSPY 2291
Score = 81.3 bits (199), Expect = 6e-14
Identities = 46/78 (58%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
Frame = -1
Query: 602 SPSNARLSPASP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
SP+N +L +P +S SP YS TSP YSPTSP YSP+SP YSP+SP S SP Y
Sbjct: 2201 SPTN-QLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 2259
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S YSPT P YSPSS
Sbjct: 2260 SPTSPKYSPTSPQYSPSS 2277
Score = 57.0 bits (136), Expect = 1e-06
Identities = 35/85 (41%), Positives = 41/85 (48%), Gaps = 26/85 (30%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------------------TSPS 504
YSP++ + SP SP YSPTSP YSPTSP YSP TSP+
Sbjct: 2245 YSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFSPTSPA 2304
Query: 503 YSPSSPTYSPSSPYSSGASPDYSPS 429
YS SSP Y S S + SP+
Sbjct: 2305 YSISSPVYDQSGNARSKSQHPLSPA 2329
Score = 56.6 bits (135), Expect = 2e-06
Identities = 49/133 (36%), Positives = 58/133 (43%), Gaps = 49/133 (36%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPS--------------------- 504
SP++ YSP+ A L SP T N SPSYSPTSP+
Sbjct: 2140 SPAMLYSPNRA-LDLFSPKQQTQNNIY--SPSYSPTSPTYHLTNPASGGGSSGLNGTKAY 2196
Query: 503 YSPSSPT---------------------------YSPSSPYSSGASPDYSP-SAGYSPTL 408
YSP+SPT YSP+SP S SP YSP S YSPT
Sbjct: 2197 YSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 2256
Query: 407 PGYSPSSTGQYTP 369
P YSP+S +Y+P
Sbjct: 2257 PKYSPTSP-KYSP 2268
[158][TOP]
>UniRef100_B0XMU6 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
RepID=B0XMU6_ASPFC
Length = 1750
Score = 95.5 bits (236), Expect = 3e-18
Identities = 47/83 (56%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Frame = -1
Query: 602 SPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-- 432
SP++ SP SP +SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP GA SP
Sbjct: 1631 SPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTS 1690
Query: 431 --SAGYSPTLPGYSPSSTGQYTP 369
S Y+PT PG+SP+S Y+P
Sbjct: 1691 PTSPKYTPTSPGWSPTSPQTYSP 1713
Score = 87.0 bits (214), Expect = 1e-15
Identities = 46/96 (47%), Positives = 63/96 (65%), Gaps = 18/96 (18%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-------YSPTSPNYSPTSPSYSPTSPSY---SPSSPTYSPS 471
SP+ +YSP++ + SP +SP SP+++PTSP+YSPTSP+Y SP+SP+YSP+
Sbjct: 1581 SPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPT 1640
Query: 470 SPYSSGASPDYSP--------SAGYSPTLPGYSPSS 387
SP S SP+YSP S +SPT P YSP+S
Sbjct: 1641 SPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1676
Score = 78.6 bits (192), Expect = 4e-13
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYS--PSNARLSPASPYSPTSPNY---SP---TSPSYSPTSPSYSPSSPTYSPSSP 465
SPS +S P++ SP S YSPTSP SP TSP +SP SPS++P+SP YSP+SP
Sbjct: 1566 SPSSPFSANPTSPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSP 1625
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
ASP SPS YSPT PG+SP+S Y+P
Sbjct: 1626 AYGQASPT-SPS--YSPTSPGFSPTSP-NYSP 1653
Score = 77.8 bits (190), Expect = 7e-13
Identities = 46/95 (48%), Positives = 56/95 (58%), Gaps = 25/95 (26%)
Frame = -1
Query: 596 SNARLSPASPYS--PTSPNYSP-------------------TSPSYSPTSPSYSPSSPTY 480
S A SP+SP+S PTSP YSP TSP +SP SPS++P+SP Y
Sbjct: 1561 SPAGYSPSSPFSANPTSPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAY 1620
Query: 479 SPSSP---YSSGASPDYSP-SAGYSPTLPGYSPSS 387
SP+SP +S SP YSP S G+SPT P YSP+S
Sbjct: 1621 SPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTS 1655
Score = 71.6 bits (174), Expect = 5e-11
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Frame = -1
Query: 614 SIAYSPSNARLSPA----SPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGA 450
S +YSP++ + A SP SPTSP Y+PTSP +SPTSP +YSP+SP ++ S
Sbjct: 1669 SPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFA-----GSPT 1723
Query: 449 SPDYSPSAGYSPTLPGYSPS 390
SP S GYSPT P +SPS
Sbjct: 1724 SPGGPTSPGYSPTSPAFSPS 1743
Score = 61.6 bits (148), Expect = 5e-08
Identities = 40/98 (40%), Positives = 51/98 (52%), Gaps = 38/98 (38%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPS-----------------YSPTSPSYSPSSP-T 483
YSP++ SPASP +SPTSP+YSPTSP+ Y+PTSP +SP+SP T
Sbjct: 1651 YSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQT 1710
Query: 482 YSPSSPYSSG-------------------ASPDYSPSA 426
YSP+SP +G SP Y PS+
Sbjct: 1711 YSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSPSYVPSS 1748
Score = 60.8 bits (146), Expect = 9e-08
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
Y P+ SP + + YSP+SP S +PTSP YSP+S +YSP+SP SP + S
Sbjct: 1545 YQPTGGFGGGFSPAATSPAGYSPSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFMTS 1603
Query: 428 AGYSPTLPGYSPSSTGQYTP 369
G+SP P ++P+S Y+P
Sbjct: 1604 PGFSPASPSFAPTSPA-YSP 1622
Score = 59.3 bits (142), Expect = 2e-07
Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -1
Query: 605 YSPSNARLSPASP--YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA 450
Y+P++ SP SP YSPTSPN+ SPTSP PTSP YSP+SP +SPS SS A
Sbjct: 1696 YTPTSPGWSPTSPQTYSPTSPNFAGSPTSPG-GPTSPGYSPTSPAFSPSYVPSSSA 1750
[159][TOP]
>UniRef100_A1D1U9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D1U9_NEOFI
Length = 1750
Score = 95.5 bits (236), Expect = 3e-18
Identities = 47/83 (56%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Frame = -1
Query: 602 SPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-- 432
SP++ SP SP +SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP GA SP
Sbjct: 1631 SPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTS 1690
Query: 431 --SAGYSPTLPGYSPSSTGQYTP 369
S Y+PT PG+SP+S Y+P
Sbjct: 1691 PTSPKYTPTSPGWSPTSPQTYSP 1713
Score = 87.0 bits (214), Expect = 1e-15
Identities = 46/96 (47%), Positives = 63/96 (65%), Gaps = 18/96 (18%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-------YSPTSPNYSPTSPSYSPTSPSY---SPSSPTYSPS 471
SP+ +YSP++ + SP +SP SP+++PTSP+YSPTSP+Y SP+SP+YSP+
Sbjct: 1581 SPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPT 1640
Query: 470 SPYSSGASPDYSP--------SAGYSPTLPGYSPSS 387
SP S SP+YSP S +SPT P YSP+S
Sbjct: 1641 SPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1676
Score = 78.6 bits (192), Expect = 4e-13
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYS--PSNARLSPASPYSPTSPNY---SP---TSPSYSPTSPSYSPSSPTYSPSSP 465
SPS +S P++ SP S YSPTSP SP TSP +SP SPS++P+SP YSP+SP
Sbjct: 1566 SPSSPFSANPTSPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSP 1625
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
ASP SPS YSPT PG+SP+S Y+P
Sbjct: 1626 AYGQASPT-SPS--YSPTSPGFSPTSP-NYSP 1653
Score = 77.8 bits (190), Expect = 7e-13
Identities = 46/95 (48%), Positives = 56/95 (58%), Gaps = 25/95 (26%)
Frame = -1
Query: 596 SNARLSPASPYS--PTSPNYSP-------------------TSPSYSPTSPSYSPSSPTY 480
S A SP+SP+S PTSP YSP TSP +SP SPS++P+SP Y
Sbjct: 1561 SPAGYSPSSPFSANPTSPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAY 1620
Query: 479 SPSSP---YSSGASPDYSP-SAGYSPTLPGYSPSS 387
SP+SP +S SP YSP S G+SPT P YSP+S
Sbjct: 1621 SPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTS 1655
Score = 71.6 bits (174), Expect = 5e-11
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Frame = -1
Query: 614 SIAYSPSNARLSPA----SPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGA 450
S +YSP++ + A SP SPTSP Y+PTSP +SPTSP +YSP+SP ++ S
Sbjct: 1669 SPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFA-----GSPT 1723
Query: 449 SPDYSPSAGYSPTLPGYSPS 390
SP S GYSPT P +SPS
Sbjct: 1724 SPGGPTSPGYSPTSPAFSPS 1743
Score = 61.6 bits (148), Expect = 5e-08
Identities = 40/98 (40%), Positives = 51/98 (52%), Gaps = 38/98 (38%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPS-----------------YSPTSPSYSPSSP-T 483
YSP++ SPASP +SPTSP+YSPTSP+ Y+PTSP +SP+SP T
Sbjct: 1651 YSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQT 1710
Query: 482 YSPSSPYSSG-------------------ASPDYSPSA 426
YSP+SP +G SP Y PS+
Sbjct: 1711 YSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSPSYVPSS 1748
Score = 60.8 bits (146), Expect = 9e-08
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
Y P+ SP + + YSP+SP S +PTSP YSP+S +YSP+SP SP + S
Sbjct: 1545 YQPTGGFGGGFSPAATSPAGYSPSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFMTS 1603
Query: 428 AGYSPTLPGYSPSSTGQYTP 369
G+SP P ++P+S Y+P
Sbjct: 1604 PGFSPASPSFAPTSPA-YSP 1622
Score = 59.3 bits (142), Expect = 2e-07
Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Frame = -1
Query: 605 YSPSNARLSPASP--YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA 450
Y+P++ SP SP YSPTSPN+ SPTSP PTSP YSP+SP +SPS SS A
Sbjct: 1696 YTPTSPGWSPTSPQTYSPTSPNFAGSPTSPG-GPTSPGYSPTSPAFSPSYVPSSSA 1750
[160][TOP]
>UniRef100_A1CNZ4 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CNZ4_ASPCL
Length = 1765
Score = 95.5 bits (236), Expect = 3e-18
Identities = 47/83 (56%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Frame = -1
Query: 602 SPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-- 432
SP++ SP SP +SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP GA SP
Sbjct: 1638 SPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTS 1697
Query: 431 --SAGYSPTLPGYSPSSTGQYTP 369
S Y+PT PG+SP+S Y+P
Sbjct: 1698 PTSPKYTPTSPGWSPTSPQTYSP 1720
Score = 80.9 bits (198), Expect = 8e-14
Identities = 48/100 (48%), Positives = 62/100 (62%), Gaps = 22/100 (22%)
Frame = -1
Query: 620 SPSIAYSP-------SNARLSPA---SP-YSPTSPNYSPTSPSYSPTSPSY---SPSSPT 483
SP+ +YSP SP SP +SP SP+++PTSP+YSPTSP+Y SP+SP+
Sbjct: 1584 SPTTSYSPIAPGITSPRFNTSPGFMTSPGFSPVSPSFAPTSPAYSPTSPAYGQASPTSPS 1643
Query: 482 YSPSSPYSSGASPDYSP--------SAGYSPTLPGYSPSS 387
YSP+SP S SP+YSP S +SPT P YSP+S
Sbjct: 1644 YSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1683
Score = 75.9 bits (185), Expect = 3e-12
Identities = 46/99 (46%), Positives = 55/99 (55%), Gaps = 29/99 (29%)
Frame = -1
Query: 596 SNARLSPASPYS--PTSPNYSP-----------------------TSPSYSPTSPSYSPS 492
S A SP SP+S PTSP YSP TSP +SP SPS++P+
Sbjct: 1564 SPAGYSPTSPFSANPTSPGYSPTTSYSPIAPGITSPRFNTSPGFMTSPGFSPVSPSFAPT 1623
Query: 491 SPTYSPSSP---YSSGASPDYSP-SAGYSPTLPGYSPSS 387
SP YSP+SP +S SP YSP S G+SPT P YSP+S
Sbjct: 1624 SPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTS 1662
Score = 73.2 bits (178), Expect = 2e-11
Identities = 46/96 (47%), Positives = 60/96 (62%), Gaps = 12/96 (12%)
Frame = -1
Query: 620 SPSIAYS--PSNARLSPASPYSPTSP-------NYSP---TSPSYSPTSPSYSPSSPTYS 477
SP+ +S P++ SP + YSP +P N SP TSP +SP SPS++P+SP YS
Sbjct: 1569 SPTSPFSANPTSPGYSPTTSYSPIAPGITSPRFNTSPGFMTSPGFSPVSPSFAPTSPAYS 1628
Query: 476 PSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
P+SP ASP SPS YSPT PG+SP+S Y+P
Sbjct: 1629 PTSPAYGQASPT-SPS--YSPTSPGFSPTSP-NYSP 1660
Score = 71.6 bits (174), Expect = 5e-11
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Frame = -1
Query: 614 SIAYSPSNARLSPA----SPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGA 450
S +YSP++ + A SP SPTSP Y+PTSP +SPTSP +YSP+SP ++ S
Sbjct: 1676 SPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFA-----GSPT 1730
Query: 449 SPDYSPSAGYSPTLPGYSPS 390
SP S GYSPT P +SPS
Sbjct: 1731 SPGGPTSPGYSPTSPAFSPS 1750
Score = 59.7 bits (143), Expect = 2e-07
Identities = 39/96 (40%), Positives = 49/96 (51%), Gaps = 38/96 (39%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPS-----------------YSPTSPSYSPSSP-T 483
YSP++ SPASP +SPTSP+YSPTSP+ Y+PTSP +SP+SP T
Sbjct: 1658 YSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQT 1717
Query: 482 YSPSSPYSSG-------------------ASPDYSP 432
YSP+SP +G SP Y P
Sbjct: 1718 YSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSPSYVP 1753
[161][TOP]
>UniRef100_A7EKT1 DNA-directed RNA polymerase n=2 Tax=Sclerotinia sclerotiorum
RepID=A7EKT1_SCLS1
Length = 1746
Score = 94.7 bits (234), Expect = 5e-18
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 9/85 (10%)
Frame = -1
Query: 614 SIAYSPSNAR-LSPASP-YSPTSPNYSPTSPSY--SPTSPSYSPSSPTYSPSSPYSSGAS 447
S AYSP++ +SP SP YSPTSPNYSPTSP+ SPTSPSYSP+SP+YSP+SP S S
Sbjct: 1619 SPAYSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTS 1678
Query: 446 PDY-----SPSAGYSPTLPGYSPSS 387
P+Y SP +G SPT P YSP+S
Sbjct: 1679 PNYAGNKVSPGSGLSPTSPVYSPTS 1703
Score = 93.6 bits (231), Expect = 1e-17
Identities = 53/93 (56%), Positives = 61/93 (65%), Gaps = 15/93 (16%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSY-----------SPTSPSYSPSSPTYS 477
SP+I SP++ SP SP YSPTSPNYSPTSP+Y SPTSP YSP+SP +S
Sbjct: 1648 SPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTSPNWS 1707
Query: 476 PSSPYSSG--ASPDYSP-SAGYSPTLPGYSPSS 387
PSSP G SP YSP S YSPT P +SP+S
Sbjct: 1708 PSSPQHQGNNTSPKYSPTSPSYSPTSPNFSPTS 1740
Score = 92.8 bits (229), Expect = 2e-17
Identities = 52/83 (62%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSY-SPTSPSYSPSSPTYSPSSP--YSSG 453
SP + SP R SP SP ++PTSP YSPTSPS+ SPTSPSYSP+SP YSP+SP + S
Sbjct: 1599 SPGYSVSP---RFSPVSPAFTPTSPAYSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSP 1655
Query: 452 ASPDYSP-SAGYSPTLPGYSPSS 387
SP YSP S YSPT P YSP+S
Sbjct: 1656 TSPSYSPTSPSYSPTSPNYSPTS 1678
Score = 90.1 bits (222), Expect = 1e-16
Identities = 51/100 (51%), Positives = 62/100 (62%), Gaps = 24/100 (24%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPY---SPTSPNYSPTSPSYSPTSPSYSPSSPTY-----------S 477
S +YSP++ SP SP SPTSP+YSPTSPSYSPTSP+YSP+SP Y S
Sbjct: 1634 SPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLS 1693
Query: 476 PSSPYSSGASPDYSPSA----------GYSPTLPGYSPSS 387
P+SP S SP++SPS+ YSPT P YSP+S
Sbjct: 1694 PTSPVYSPTSPNWSPSSPQHQGNNTSPKYSPTSPSYSPTS 1733
Score = 79.7 bits (195), Expect = 2e-13
Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 26/104 (25%)
Frame = -1
Query: 602 SPSNARLSPASP-YSPTSP--------------NYSPTSPSYSPTSPSYSPSSPTY-SPS 471
SP++ + SP+SP YSPTSP +SP SP+++PTSP+YSP+SP++ SP+
Sbjct: 1574 SPTSPQFSPSSPGYSPTSPMMGGGASPGYSVSPRFSPVSPAFTPTSPAYSPTSPSFVSPT 1633
Query: 470 SPYSSGASPDYSP----------SAGYSPTLPGYSPSSTGQYTP 369
SP S SP+YSP S YSPT P YSP+S Y+P
Sbjct: 1634 SPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSP-NYSP 1676
Score = 70.5 bits (171), Expect = 1e-10
Identities = 42/89 (47%), Positives = 48/89 (53%), Gaps = 24/89 (26%)
Frame = -1
Query: 581 SPASPYSPTSP-NYSPTSPSYSPTSPSYSPS--------------SPTYSPSSPYSSGAS 447
SP YSPTSP N SPTSP +SP+SP YSP+ SP +SP SP + S
Sbjct: 1560 SPGGGYSPTSPFNASPTSPQFSPSSPGYSPTSPMMGGGASPGYSVSPRFSPVSPAFTPTS 1619
Query: 446 PDYSP---------SAGYSPTLPGYSPSS 387
P YSP S YSPT P YSP+S
Sbjct: 1620 PAYSPTSPSFVSPTSPSYSPTSPNYSPTS 1648
Score = 65.1 bits (157), Expect = 5e-09
Identities = 33/50 (66%), Positives = 37/50 (74%), Gaps = 10/50 (20%)
Frame = -1
Query: 584 LSPASP-YSPTSPNYSP---------TSPSYSPTSPSYSPSSPTYSPSSP 465
LSP SP YSPTSPN+SP TSP YSPTSPSYSP+SP +SP+SP
Sbjct: 1692 LSPTSPVYSPTSPNWSPSSPQHQGNNTSPKYSPTSPSYSPTSPNFSPTSP 1741
Score = 58.5 bits (140), Expect = 4e-07
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPY---SPTSPNYSPTSPSYSPTSPSYSPSSP 486
S YSP++ SP+SP + TSP YSPTSPSYSPTSP++SP+SP
Sbjct: 1696 SPVYSPTSPNWSPSSPQHQGNNTSPKYSPTSPSYSPTSPNFSPTSP 1741
[162][TOP]
>UniRef100_A6SI63 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10
RepID=A6SI63_BOTFB
Length = 1742
Score = 94.7 bits (234), Expect = 5e-18
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 9/85 (10%)
Frame = -1
Query: 614 SIAYSPSNAR-LSPASP-YSPTSPNYSPTSPSY--SPTSPSYSPSSPTYSPSSPYSSGAS 447
S AYSP++ +SP SP YSPTSPNYSPTSP+ SPTSPSYSP+SP+YSP+SP S S
Sbjct: 1615 SPAYSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTS 1674
Query: 446 PDY-----SPSAGYSPTLPGYSPSS 387
P+Y SP +G SPT P YSP+S
Sbjct: 1675 PNYAGNKVSPGSGLSPTSPVYSPTS 1699
Score = 93.6 bits (231), Expect = 1e-17
Identities = 53/93 (56%), Positives = 61/93 (65%), Gaps = 15/93 (16%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSY-----------SPTSPSYSPSSPTYS 477
SP+I SP++ SP SP YSPTSPNYSPTSP+Y SPTSP YSP+SP +S
Sbjct: 1644 SPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTSPNWS 1703
Query: 476 PSSPYSSG--ASPDYSP-SAGYSPTLPGYSPSS 387
PSSP G SP YSP S YSPT P +SP+S
Sbjct: 1704 PSSPQHQGNSTSPKYSPTSPSYSPTSPNFSPTS 1736
Score = 90.1 bits (222), Expect = 1e-16
Identities = 51/100 (51%), Positives = 62/100 (62%), Gaps = 24/100 (24%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPY---SPTSPNYSPTSPSYSPTSPSYSPSSPTY-----------S 477
S +YSP++ SP SP SPTSP+YSPTSPSYSPTSP+YSP+SP Y S
Sbjct: 1630 SPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLS 1689
Query: 476 PSSPYSSGASPDYSPSA----------GYSPTLPGYSPSS 387
P+SP S SP++SPS+ YSPT P YSP+S
Sbjct: 1690 PTSPVYSPTSPNWSPSSPQHQGNSTSPKYSPTSPSYSPTS 1729
Score = 80.5 bits (197), Expect = 1e-13
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 26/104 (25%)
Frame = -1
Query: 602 SPSNARLSPASP-YSPTSP--------------NYSPTSPSYSPTSPSYSPSSPTY-SPS 471
SPS+ SP+SP YSPTSP +SP SP+++PTSP+YSP+SP++ SP+
Sbjct: 1570 SPSSPNFSPSSPGYSPTSPMMGGGASPGYAVSPRFSPVSPAFTPTSPAYSPTSPSFVSPT 1629
Query: 470 SPYSSGASPDYSP----------SAGYSPTLPGYSPSSTGQYTP 369
SP S SP+YSP S YSPT P YSP+S Y+P
Sbjct: 1630 SPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSP-NYSP 1672
Score = 69.3 bits (168), Expect = 2e-10
Identities = 41/89 (46%), Positives = 49/89 (55%), Gaps = 24/89 (26%)
Frame = -1
Query: 581 SPASPYSPTSP-NYSPTSPSYSPTSPSYSPS--------------SPTYSPSSPYSSGAS 447
SP YSPTSP N SP+SP++SP+SP YSP+ SP +SP SP + S
Sbjct: 1556 SPGGGYSPTSPFNASPSSPNFSPSSPGYSPTSPMMGGGASPGYAVSPRFSPVSPAFTPTS 1615
Query: 446 PDYSP---------SAGYSPTLPGYSPSS 387
P YSP S YSPT P YSP+S
Sbjct: 1616 PAYSPTSPSFVSPTSPSYSPTSPNYSPTS 1644
Score = 65.1 bits (157), Expect = 5e-09
Identities = 33/50 (66%), Positives = 37/50 (74%), Gaps = 10/50 (20%)
Frame = -1
Query: 584 LSPASP-YSPTSPNYSP---------TSPSYSPTSPSYSPSSPTYSPSSP 465
LSP SP YSPTSPN+SP TSP YSPTSPSYSP+SP +SP+SP
Sbjct: 1688 LSPTSPVYSPTSPNWSPSSPQHQGNSTSPKYSPTSPSYSPTSPNFSPTSP 1737
Score = 58.9 bits (141), Expect = 3e-07
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPY---SPTSPNYSPTSPSYSPTSPSYSPSSP 486
S YSP++ SP+SP + TSP YSPTSPSYSPTSP++SP+SP
Sbjct: 1692 SPVYSPTSPNWSPSSPQHQGNSTSPKYSPTSPSYSPTSPNFSPTSP 1737
[163][TOP]
>UniRef100_C6HNU4 DNA-directed RNA polymerase II n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HNU4_AJECH
Length = 668
Score = 94.4 bits (233), Expect = 7e-18
Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 22/104 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S A++P++ SP SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP
Sbjct: 531 SPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSP 590
Query: 443 DYSP-------------------SAGYSPTLPGYSPSSTGQYTP 369
YSP S Y+PT PG+SP+S Y+P
Sbjct: 591 SYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSP 634
Score = 89.4 bits (220), Expect = 2e-16
Identities = 49/94 (52%), Positives = 63/94 (67%), Gaps = 10/94 (10%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-------YSPTSPNYSPTSPSYSPTSPSY--SPSSPTYSPSS 468
SPS YSP++ +S SP +SP SP ++PTSP+YSPTSPSY SP+SP+YSP+S
Sbjct: 502 SPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTS 561
Query: 467 PYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P S SP YSP S +SP P +SP+S Y+P
Sbjct: 562 PGFSPTSPSYSPTSPSFSPASPAFSPTSP-SYSP 594
Score = 83.6 bits (205), Expect = 1e-14
Identities = 47/89 (52%), Positives = 59/89 (66%), Gaps = 11/89 (12%)
Frame = -1
Query: 620 SPSIAY--SPSNARLSPASPYSPTSPNYSPTSP------SYSPTSPSYSPSSPTYSPSSP 465
SPS + SP++ R SP+S YSPTSP S TSP +SP SP+++P+SP YSP+SP
Sbjct: 487 SPSSPFNTSPTSPRYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSP 546
Query: 464 --YSSGASPDYSP-SAGYSPTLPGYSPSS 387
S SP YSP S G+SPT P YSP+S
Sbjct: 547 SYQQSPTSPSYSPTSPGFSPTSPSYSPTS 575
Score = 72.0 bits (175), Expect = 4e-11
Identities = 45/91 (49%), Positives = 55/91 (60%), Gaps = 12/91 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---------YSPTSPNYSPTSPSYSPTSPSYSPSSP-TYSPSSP 465
S A+SP++ SP SP SPT SPTSP Y+PTSP +SP+SP TYSP+SP
Sbjct: 582 SPAFSPTSPSYSPTSPALGVSTGRHLSPT----SPTSPKYTPTSPGWSPTSPETYSPTSP 637
Query: 464 YSSGA--SPDYSPSAGYSPTLPGYSPSSTGQ 378
SG+ SP S GYSPT P ++P S Q
Sbjct: 638 NFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 668
Score = 67.8 bits (164), Expect = 7e-10
Identities = 46/88 (52%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPY--SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SP A SP SP+SP+ SPTSP YSP+S YSPTSP S +SP + SSP S AS
Sbjct: 475 SPHGARSPGGG-YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFM-SSPGFSPAS 531
Query: 446 PDYSP-SAGYSPTLPGYSPSSTG-QYTP 369
P ++P S YSPT P Y S T Y+P
Sbjct: 532 PAFAPTSPAYSPTSPSYQQSPTSPSYSP 559
Score = 66.6 bits (161), Expect = 2e-09
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
+SP AR SP YSP+SP N SPTSP YSP+S YSP+SP S +SP +SP +SP
Sbjct: 474 FSPHGAR-SPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFM-SSPGFSPA 530
Query: 431 SAGYSPTLPGYSPSS 387
S ++PT P YSP+S
Sbjct: 531 SPAFAPTSPAYSPTS 545
[164][TOP]
>UniRef100_C5GKA7 DNA-directed RNA polymerase n=2 Tax=Ajellomyces dermatitidis
RepID=C5GKA7_AJEDR
Length = 1746
Score = 94.4 bits (233), Expect = 7e-18
Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 22/104 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S A++P++ SP SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP
Sbjct: 1609 SPAFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSP 1668
Query: 443 DYSP-------------------SAGYSPTLPGYSPSSTGQYTP 369
YSP S Y+PT PG+SP+S Y+P
Sbjct: 1669 SYSPTSPALGISTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1712
Score = 85.1 bits (209), Expect = 4e-15
Identities = 43/81 (53%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTY--SPSSPYSSGAS 447
SPS YSP++ +S SP +SP +SP SP+++PTSP+YSP+SP Y SP+SP S S
Sbjct: 1580 SPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPGYQQSPTSPSYSPTS 1639
Query: 446 PDYSP-SAGYSPTLPGYSPSS 387
P +SP S YSPT P +SP+S
Sbjct: 1640 PGFSPTSPSYSPTSPSFSPAS 1660
Score = 82.8 bits (203), Expect = 2e-14
Identities = 44/81 (54%), Positives = 55/81 (67%), Gaps = 9/81 (11%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSP------SYSPTSPSYSPSSPTYSPSSP--YSSGAS 447
SP++ R SP+S YSPTSP S TSP +SP SP+++P+SP YSP+SP S S
Sbjct: 1573 SPTSPRYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPGYQQSPTS 1632
Query: 446 PDYSP-SAGYSPTLPGYSPSS 387
P YSP S G+SPT P YSP+S
Sbjct: 1633 PSYSPTSPGFSPTSPSYSPTS 1653
Score = 73.2 bits (178), Expect = 2e-11
Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 12/91 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---------YSPTSPNYSPTSPSYSPTSPSYSPSSP-TYSPSSP 465
S A+SP++ SP SP SPT SPTSP Y+PTSP +SP+SP TYSP+SP
Sbjct: 1660 SPAFSPTSPSYSPTSPALGISTGRHLSPT----SPTSPKYTPTSPGWSPTSPETYSPTSP 1715
Query: 464 YSSGA--SPDYSPSAGYSPTLPGYSPSSTGQ 378
SG+ SP S GYSPT P ++P+S Q
Sbjct: 1716 NFSGSPTSPGGPTSPGYSPTSPTFNPTSPRQ 1746
Score = 64.3 bits (155), Expect = 8e-09
Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
+SP AR SP YSPTSP N SPTSP YSP+S YSP+SP S SP + S
Sbjct: 1552 FSPHGAR-SPGGGYSPTSPFNTSPTSPRYSPSSG--------YSPTSPGMSITSPRFMSS 1602
Query: 428 AGYSPTLPGYSPSSTGQYTP 369
G+SP P ++P+S Y+P
Sbjct: 1603 PGFSPASPAFAPTSPA-YSP 1621
[165][TOP]
>UniRef100_C0NEY2 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0NEY2_AJECG
Length = 1234
Score = 94.4 bits (233), Expect = 7e-18
Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 22/104 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S A++P++ SP SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP
Sbjct: 1097 SPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSP 1156
Query: 443 DYSP-------------------SAGYSPTLPGYSPSSTGQYTP 369
YSP S Y+PT PG+SP+S Y+P
Sbjct: 1157 SYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1200
Score = 89.4 bits (220), Expect = 2e-16
Identities = 49/94 (52%), Positives = 63/94 (67%), Gaps = 10/94 (10%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-------YSPTSPNYSPTSPSYSPTSPSY--SPSSPTYSPSS 468
SPS YSP++ +S SP +SP SP ++PTSP+YSPTSPSY SP+SP+YSP+S
Sbjct: 1068 SPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTS 1127
Query: 467 PYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P S SP YSP S +SP P +SP+S Y+P
Sbjct: 1128 PGFSPTSPSYSPTSPSFSPASPAFSPTSP-SYSP 1160
Score = 83.6 bits (205), Expect = 1e-14
Identities = 47/89 (52%), Positives = 59/89 (66%), Gaps = 11/89 (12%)
Frame = -1
Query: 620 SPSIAY--SPSNARLSPASPYSPTSPNYSPTSP------SYSPTSPSYSPSSPTYSPSSP 465
SPS + SP++ R SP+S YSPTSP S TSP +SP SP+++P+SP YSP+SP
Sbjct: 1053 SPSSPFNTSPTSPRYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSP 1112
Query: 464 --YSSGASPDYSP-SAGYSPTLPGYSPSS 387
S SP YSP S G+SPT P YSP+S
Sbjct: 1113 SYQQSPTSPSYSPTSPGFSPTSPSYSPTS 1141
Score = 72.0 bits (175), Expect = 4e-11
Identities = 45/91 (49%), Positives = 55/91 (60%), Gaps = 12/91 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---------YSPTSPNYSPTSPSYSPTSPSYSPSSP-TYSPSSP 465
S A+SP++ SP SP SPT SPTSP Y+PTSP +SP+SP TYSP+SP
Sbjct: 1148 SPAFSPTSPSYSPTSPALGVSTGRHLSPT----SPTSPKYTPTSPGWSPTSPETYSPTSP 1203
Query: 464 YSSGA--SPDYSPSAGYSPTLPGYSPSSTGQ 378
SG+ SP S GYSPT P ++P S Q
Sbjct: 1204 NFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 1234
Score = 67.8 bits (164), Expect = 7e-10
Identities = 46/88 (52%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPY--SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SP A SP SP+SP+ SPTSP YSP+S YSPTSP S +SP + SSP S AS
Sbjct: 1041 SPHGARSPGGG-YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFM-SSPGFSPAS 1097
Query: 446 PDYSP-SAGYSPTLPGYSPSSTG-QYTP 369
P ++P S YSPT P Y S T Y+P
Sbjct: 1098 PAFAPTSPAYSPTSPSYQQSPTSPSYSP 1125
Score = 66.6 bits (161), Expect = 2e-09
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
+SP AR SP YSP+SP N SPTSP YSP+S YSP+SP S +SP +SP +SP
Sbjct: 1040 FSPHGAR-SPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFM-SSPGFSPA 1096
Query: 431 SAGYSPTLPGYSPSS 387
S ++PT P YSP+S
Sbjct: 1097 SPAFAPTSPAYSPTS 1111
[166][TOP]
>UniRef100_A6QYA7 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6QYA7_AJECN
Length = 1747
Score = 94.4 bits (233), Expect = 7e-18
Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 22/104 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S A++P++ SP SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP
Sbjct: 1610 SPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSP 1669
Query: 443 DYSP-------------------SAGYSPTLPGYSPSSTGQYTP 369
YSP S Y+PT PG+SP+S Y+P
Sbjct: 1670 SYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1713
Score = 89.4 bits (220), Expect = 2e-16
Identities = 49/94 (52%), Positives = 63/94 (67%), Gaps = 10/94 (10%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-------YSPTSPNYSPTSPSYSPTSPSY--SPSSPTYSPSS 468
SPS YSP++ +S SP +SP SP ++PTSP+YSPTSPSY SP+SP+YSP+S
Sbjct: 1581 SPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTS 1640
Query: 467 PYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P S SP YSP S +SP P +SP+S Y+P
Sbjct: 1641 PGFSPTSPSYSPTSPSFSPASPAFSPTSP-SYSP 1673
Score = 83.6 bits (205), Expect = 1e-14
Identities = 47/89 (52%), Positives = 59/89 (66%), Gaps = 11/89 (12%)
Frame = -1
Query: 620 SPSIAY--SPSNARLSPASPYSPTSPNYSPTSP------SYSPTSPSYSPSSPTYSPSSP 465
SPS + SP++ R SP+S YSPTSP S TSP +SP SP+++P+SP YSP+SP
Sbjct: 1566 SPSSPFNTSPTSPRYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYSPTSP 1625
Query: 464 --YSSGASPDYSP-SAGYSPTLPGYSPSS 387
S SP YSP S G+SPT P YSP+S
Sbjct: 1626 SYQQSPTSPSYSPTSPGFSPTSPSYSPTS 1654
Score = 72.0 bits (175), Expect = 4e-11
Identities = 45/91 (49%), Positives = 55/91 (60%), Gaps = 12/91 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---------YSPTSPNYSPTSPSYSPTSPSYSPSSP-TYSPSSP 465
S A+SP++ SP SP SPT SPTSP Y+PTSP +SP+SP TYSP+SP
Sbjct: 1661 SPAFSPTSPSYSPTSPALGVSTGRHLSPT----SPTSPKYTPTSPGWSPTSPETYSPTSP 1716
Query: 464 YSSGA--SPDYSPSAGYSPTLPGYSPSSTGQ 378
SG+ SP S GYSPT P ++P S Q
Sbjct: 1717 NFSGSPTSPGGPTSPGYSPTSPTFNPISPRQ 1747
Score = 67.8 bits (164), Expect = 7e-10
Identities = 46/88 (52%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPY--SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SP A SP SP+SP+ SPTSP YSP+S YSPTSP S +SP + SSP S AS
Sbjct: 1554 SPHGARSPGGG-YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFM-SSPGFSPAS 1610
Query: 446 PDYSP-SAGYSPTLPGYSPSSTG-QYTP 369
P ++P S YSPT P Y S T Y+P
Sbjct: 1611 PAFAPTSPAYSPTSPSYQQSPTSPSYSP 1638
Score = 66.6 bits (161), Expect = 2e-09
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
+SP AR SP YSP+SP N SPTSP YSP+S YSP+SP S +SP +SP +SP
Sbjct: 1553 FSPHGAR-SPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFM-SSPGFSPA 1609
Query: 431 SAGYSPTLPGYSPSS 387
S ++PT P YSP+S
Sbjct: 1610 SPAFAPTSPAYSPTS 1624
[167][TOP]
>UniRef100_C6F1F3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F3_9APIC
Length = 225
Score = 94.0 bits (232), Expect = 9e-18
Identities = 49/85 (57%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YS ++ + SP SP YSPTSP Y PTSP YSPTSP YSP+SP YSP+SP S SP Y
Sbjct: 53 SPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKY 112
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTPH 366
SP S YSPT P + S+ Y+P+
Sbjct: 113 SPTSPQYSPTSPVPNNPSSPHYSPY 137
Score = 92.0 bits (227), Expect = 3e-17
Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 6/79 (7%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-ASPDYSP 432
Y P++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP + +SP YSP
Sbjct: 77 YLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSP 136
Query: 431 ----SAGYSPTLPGYSPSS 387
S +SPT P YS SS
Sbjct: 137 YAIASPKFSPTSPAYSISS 155
Score = 88.6 bits (218), Expect = 4e-16
Identities = 48/73 (65%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Frame = -1
Query: 581 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 408
S SP YS TSP YSPTSP YSPTSP Y P+SP YSP+SP S SP YSP S YSPT
Sbjct: 50 SVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTS 109
Query: 407 PGYSPSSTGQYTP 369
P YSP+S QY+P
Sbjct: 110 PKYSPTSP-QYSP 121
Score = 80.5 bits (197), Expect = 1e-13
Identities = 47/87 (54%), Positives = 57/87 (65%), Gaps = 8/87 (9%)
Frame = -1
Query: 605 YSPSNAR--LSPASP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
YSP++ + LS +P +S SP YS TSP YSPTSP YSP+SP Y P+SP S S
Sbjct: 29 YSPTSPKNQLSEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTS 88
Query: 446 PDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P YSP S YSPT P YSP+S +Y+P
Sbjct: 89 PKYSPTSPKYSPTSPKYSPTSP-KYSP 114
Score = 60.5 bits (145), Expect = 1e-07
Identities = 39/90 (43%), Positives = 48/90 (53%), Gaps = 14/90 (15%)
Frame = -1
Query: 596 SNARLSPASPYSPTSPNYSPTSPS-------------YSPTSPSYSPSSPTYSPSSPYSS 456
+NA +S + T YSPTSP +S SP YS +SP YSP+SP S
Sbjct: 12 NNANAGGSSGLNDTKAFYSPTSPKNQLSEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYS 71
Query: 455 GASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP Y P S YSPT P YSP+S +Y+P
Sbjct: 72 PTSPKYLPTSPKYSPTSPKYSPTSP-KYSP 100
Score = 57.0 bits (136), Expect = 1e-06
Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 19/78 (24%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSP------------------SYSPTSPSYSPSSPT 483
YSP++ + SP SP YSPTSP YSPTSP +SPTSP+YS SSP
Sbjct: 98 YSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISSPV 157
Query: 482 YSPSSPYSSGASPDYSPS 429
Y S + + SP+
Sbjct: 158 YDQSGNARNKSQHPLSPA 175
[168][TOP]
>UniRef100_O77375 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=O77375_PLAF7
Length = 2457
Score = 93.2 bits (230), Expect = 2e-17
Identities = 51/86 (59%), Positives = 58/86 (67%), Gaps = 13/86 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-------- 453
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S
Sbjct: 2302 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNI 2361
Query: 452 ASPDYSP----SAGYSPTLPGYSPSS 387
ASP+YSP S +SPT P YS SS
Sbjct: 2362 ASPNYSPYSITSPKFSPTSPAYSISS 2387
Score = 92.0 bits (227), Expect = 3e-17
Identities = 48/75 (64%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+ + S SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP
Sbjct: 2281 YNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2340
Query: 431 SAGYSPTLPGYSPSS 387
S YSPT P YSP+S
Sbjct: 2341 SPKYSPTSPKYSPTS 2355
Score = 86.7 bits (213), Expect = 1e-15
Identities = 50/95 (52%), Positives = 58/95 (61%), Gaps = 13/95 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 471
S Y+ +NA SP SP Y+ SP YS TSP YSPTSP YSP+SP YSP+
Sbjct: 2253 SPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPT 2312
Query: 470 SPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP S SP YSP S YSPT P YSP+S +Y+P
Sbjct: 2313 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSP-KYSP 2346
Score = 82.8 bits (203), Expect = 2e-14
Identities = 48/89 (53%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGA 450
S YS ++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSP SP
Sbjct: 2285 SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP----T 2340
Query: 449 SPDYSP-SAGYSPTLPGYSPSSTGQYTPH 366
SP YSP S YSPT P ++ Y+P+
Sbjct: 2341 SPKYSPTSPKYSPTSPVAQNIASPNYSPY 2369
Score = 74.7 bits (182), Expect = 6e-12
Identities = 48/122 (39%), Positives = 60/122 (49%), Gaps = 22/122 (18%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT------------------ 483
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP
Sbjct: 2316 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPK 2375
Query: 482 YSPSSPYSSGASPDYSPSA---GYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDK 312
+SP+SP S +SP Y S + P P Y S Q + D + + A D+
Sbjct: 2376 FSPTSPAYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQDANMFSPIQQAHVDEA 2435
Query: 311 GN 306
N
Sbjct: 2436 KN 2437
Score = 57.8 bits (138), Expect = 7e-07
Identities = 49/125 (39%), Positives = 63/125 (50%), Gaps = 19/125 (15%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS------ 459
SP+I YSP N L SP N++ SPSYSPTSP+Y+ ++ YSP+SP +
Sbjct: 2221 SPNI-YSP-NPMLDIFSPKPQI--NHNIYSPSYSPTSPTYNANNAYYSPTSPKNQNDQMN 2276
Query: 458 ------------SGASPDYSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKD 318
S SP YSP S YSPT P YSP+S +Y+P K T K +
Sbjct: 2277 VNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSP-KYSP-TSPKYSPTSPKYSPTS 2334
Query: 317 DKGNP 303
K +P
Sbjct: 2335 PKYSP 2339
[169][TOP]
>UniRef100_C5FCL2 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FCL2_NANOT
Length = 1748
Score = 93.2 bits (230), Expect = 2e-17
Identities = 49/105 (46%), Positives = 64/105 (60%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA 450
S +++P++ SP SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S
Sbjct: 1610 SPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPVFSPT 1669
Query: 449 SPDYSP------------------SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S Y+PT PG+SP+S Y+P
Sbjct: 1670 SPSYSPTSPALGGTGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSP 1714
Score = 84.3 bits (207), Expect = 7e-15
Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 5/83 (6%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTY----SPSSPYSSG 453
SPS YSP++ +S SP +SP +SP SPS++PTSP+YSP+SP Y SP+SP S
Sbjct: 1581 SPSSGYSPTSPGMSITSPRFISSPAFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSP 1640
Query: 452 ASPDYSP-SAGYSPTLPGYSPSS 387
SP +SP S YSPT P +SP+S
Sbjct: 1641 TSPGFSPTSPSYSPTSPSFSPAS 1663
Score = 81.6 bits (200), Expect = 5e-14
Identities = 47/91 (51%), Positives = 59/91 (64%), Gaps = 13/91 (14%)
Frame = -1
Query: 620 SPSIAY--SPSNARLSPASPYSPTSPNYSPTSP------SYSPTSPSYSPSSPTYSPSSP 465
SPS + SP++ SP+S YSPTSP S TSP ++SP SPS++P+SP YSP+SP
Sbjct: 1566 SPSSPFNTSPTSPAYSPSSGYSPTSPGMSITSPRFISSPAFSPASPSFAPTSPAYSPTSP 1625
Query: 464 ----YSSGASPDYSP-SAGYSPTLPGYSPSS 387
S SP YSP S G+SPT P YSP+S
Sbjct: 1626 GYGQAQSPTSPSYSPTSPGFSPTSPSYSPTS 1656
Score = 81.6 bits (200), Expect = 5e-14
Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 14/90 (15%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSY----------SPTSPSYSPSSPTYSPSS 468
S +YSP++ SPASP +SPTSP+YSPTSP+ SPTSP Y+P+SP +SP+S
Sbjct: 1649 SPSYSPTSPSFSPASPVFSPTSPSYSPTSPALGGTGRHLSPTSPTSPKYTPTSPGWSPTS 1708
Query: 467 PYS-SGASPDYS--PSAGYSPTLPGYSPSS 387
P + S SP++S P++ PT PGYSP+S
Sbjct: 1709 PEAYSPTSPNFSGSPTSPGGPTSPGYSPTS 1738
Score = 71.2 bits (173), Expect = 6e-11
Identities = 42/84 (50%), Positives = 51/84 (60%), Gaps = 9/84 (10%)
Frame = -1
Query: 602 SPSNARLSPA--------SPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGA 450
SPS + SPA SP SPTSP Y+PTSP +SPTSP +YSP+SP +S S
Sbjct: 1670 SPSYSPTSPALGGTGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFS-----GSPT 1724
Query: 449 SPDYSPSAGYSPTLPGYSPSSTGQ 378
SP S GYSPT P ++P+S Q
Sbjct: 1725 SPGGPTSPGYSPTSPTFNPTSPRQ 1748
Score = 66.6 bits (161), Expect = 2e-09
Identities = 41/77 (53%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
+SP R SP YSP+SP N SPTSP+YSP+S YSP+SP S +SP +SP +SP
Sbjct: 1553 FSPHEPR-SPGGGYSPSSPFNTSPTSPAYSPSS-GYSPTSPGMSITSPRFI-SSPAFSPA 1609
Query: 431 SAGYSPTLPGYSPSSTG 381
S ++PT P YSP+S G
Sbjct: 1610 SPSFAPTSPAYSPTSPG 1626
Score = 63.2 bits (152), Expect = 2e-08
Identities = 44/98 (44%), Positives = 51/98 (52%), Gaps = 25/98 (25%)
Frame = -1
Query: 599 PSNARLSPASPYSPTSPNYSPTSP-SYSPTSPSYSP-------------------SSPTY 480
PS SP P SP YSP+SP + SPTSP+YSP SSP +
Sbjct: 1548 PSYGGFSPHEPRSPGG-GYSPSSPFNTSPTSPAYSPSSGYSPTSPGMSITSPRFISSPAF 1606
Query: 479 SPSSPYSSGASPDYSP-SAGY----SPTLPGYSPSSTG 381
SP+SP + SP YSP S GY SPT P YSP+S G
Sbjct: 1607 SPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPG 1644
Score = 61.2 bits (147), Expect = 7e-08
Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 4/51 (7%)
Frame = -1
Query: 605 YSPSNARLSPASP--YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSP 465
Y+P++ SP SP YSPTSPN+ SPTSP PTSP YSP+SPT++P+SP
Sbjct: 1697 YTPTSPGWSPTSPEAYSPTSPNFSGSPTSPG-GPTSPGYSPTSPTFNPTSP 1746
[170][TOP]
>UniRef100_C6F1F6 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F6_PLAVI
Length = 211
Score = 92.8 bits (229), Expect = 2e-17
Identities = 49/78 (62%), Positives = 56/78 (71%), Gaps = 6/78 (7%)
Frame = -1
Query: 602 SPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG-ASPDYSP- 432
SP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP YSPSSP + +SP YSP
Sbjct: 64 SPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPY 123
Query: 431 ---SAGYSPTLPGYSPSS 387
S +SPT P YS SS
Sbjct: 124 AIASPKFSPTSPAYSISS 141
Score = 80.1 bits (196), Expect = 1e-13
Identities = 43/74 (58%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Frame = -1
Query: 581 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 408
S SP YS TSP SPTSP YSPTSP YSP+SP YSP+SP S SP YSP S YSP+
Sbjct: 50 SVVSPVYSVTSPKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSS 109
Query: 407 PGYSPSSTGQYTPH 366
P + S+ Y+P+
Sbjct: 110 PVPNNPSSPHYSPY 123
Score = 78.2 bits (191), Expect = 5e-13
Identities = 45/78 (57%), Positives = 51/78 (65%), Gaps = 6/78 (7%)
Frame = -1
Query: 602 SPSNARLSPASP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
SP+N +L +P +S SP YS TSP SPTSP YSP+SP YSP+SP S SP Y
Sbjct: 33 SPTN-QLDEVNPNMMKYHSVVSPVYSVTSPKXSPTSPKYSPTSPKYSPTSPKYSPTSPKY 91
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S YSPT P YSPSS
Sbjct: 92 SPTSPKYSPTSPQYSPSS 109
Score = 63.5 bits (153), Expect = 1e-08
Identities = 45/108 (41%), Positives = 50/108 (46%), Gaps = 42/108 (38%)
Frame = -1
Query: 566 YSPTSPN---------------------YSPTSPS--------------------YSPTS 510
YSPTSP YSPTSP+ YS TS
Sbjct: 1 YSPTSPTYHLTNPASGGGSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTS 60
Query: 509 PSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P SP+SP YSP+SP S SP YSP S YSPT P YSP+S QY+P
Sbjct: 61 PKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP-QYSP 107
Score = 57.0 bits (136), Expect = 1e-06
Identities = 35/85 (41%), Positives = 41/85 (48%), Gaps = 26/85 (30%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSP-------------------------TSPS 504
YSP++ + SP SP YSPTSP YSPTSP YSP TSP+
Sbjct: 77 YSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFSPTSPA 136
Query: 503 YSPSSPTYSPSSPYSSGASPDYSPS 429
YS SSP Y S S + SP+
Sbjct: 137 YSISSPVYDQSGNARSKSQHPLSPA 161
[171][TOP]
>UniRef100_C4JY44 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JY44_UNCRE
Length = 1747
Score = 92.8 bits (229), Expect = 2e-17
Identities = 49/106 (46%), Positives = 64/106 (60%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA 450
S +++P++ SP SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S
Sbjct: 1563 SPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPT 1622
Query: 449 SPDYSP-------------------SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S Y+PT PG+SP+S Y+P
Sbjct: 1623 SPSYSPTSPALGGVTGRHLSPTSPTSPKYTPTSPGWSPTSPDAYSP 1668
Score = 85.5 bits (210), Expect = 3e-15
Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 5/83 (6%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTY----SPSSPYSSG 453
SPS YSP++ + SP TSP +SP SPS++PTSP+YSP+SP Y SP+SP S
Sbjct: 1534 SPSSGYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPGYGQAQSPTSPSYSP 1593
Query: 452 ASPDYSP-SAGYSPTLPGYSPSS 387
SP +SP S YSPT P +SP+S
Sbjct: 1594 TSPGFSPTSPSYSPTSPSFSPAS 1616
Score = 79.7 bits (195), Expect = 2e-13
Identities = 45/83 (54%), Positives = 55/83 (66%), Gaps = 11/83 (13%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNY---SP---TSPSYSPTSPSYSPSSPTYSPSSP----YSSG 453
SP++ SP+S YSPTSP SP TSP +SP SPS++P+SP YSP+SP S
Sbjct: 1527 SPTSPGYSPSSGYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPGYGQAQSP 1586
Query: 452 ASPDYSP-SAGYSPTLPGYSPSS 387
SP YSP S G+SPT P YSP+S
Sbjct: 1587 TSPSYSPTSPGFSPTSPSYSPTS 1609
Score = 79.7 bits (195), Expect = 2e-13
Identities = 50/118 (42%), Positives = 64/118 (54%), Gaps = 37/118 (31%)
Frame = -1
Query: 608 AYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA------ 450
A SP++ SP SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP G
Sbjct: 1583 AQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGVTGRHLS 1642
Query: 449 -----SPDYSP-SAGYSPTL------------------------PGYSPSSTGQYTPH 366
SP Y+P S G+SPT PGYSP+S Y P+
Sbjct: 1643 PTSPTSPKYTPTSPGWSPTSPDAYSPTSPNFAGSPTSPGWSLLPPGYSPTSP-TYNPN 1699
Score = 68.2 bits (165), Expect = 5e-10
Identities = 49/91 (53%), Positives = 58/91 (63%), Gaps = 12/91 (13%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTY---SP---SSPYSSGAS 447
+SP+ AR SP YSPTSP N SPTSP YSP+S YSP+SP SP +SP S AS
Sbjct: 1506 FSPAGAR-SPGGGYSPTSPFNTSPTSPGYSPSS-GYSPTSPGMGITSPRFMTSPGFSPAS 1563
Query: 446 PDYSP-SAGYSPTLPGY----SPSSTGQYTP 369
P ++P S YSPT PGY SP+S Y+P
Sbjct: 1564 PSFAPTSPAYSPTSPGYGQAQSPTSP-SYSP 1593
[172][TOP]
>UniRef100_C1GHL1 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb18 RepID=C1GHL1_PARBD
Length = 1746
Score = 92.8 bits (229), Expect = 2e-17
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 22/104 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S ++P++ SP SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP
Sbjct: 1610 SPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSP 1669
Query: 443 DYSP-------------------SAGYSPTLPGYSPSSTGQYTP 369
YSP S Y+PT PG+SP+S Y+P
Sbjct: 1670 SYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1713
Score = 84.0 bits (206), Expect = 9e-15
Identities = 43/81 (53%), Positives = 56/81 (69%), Gaps = 3/81 (3%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTY--SPSSPYSSGAS 447
SPS YSP++ +S SP +SP +SP SP ++PTSP+YSP+SP Y SP+SP S S
Sbjct: 1581 SPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTS 1640
Query: 446 PDYSP-SAGYSPTLPGYSPSS 387
P +SP S YSPT P +SP+S
Sbjct: 1641 PGFSPTSPSYSPTSPSFSPAS 1661
Score = 82.4 bits (202), Expect = 3e-14
Identities = 47/89 (52%), Positives = 58/89 (65%), Gaps = 11/89 (12%)
Frame = -1
Query: 620 SPSIAY--SPSNARLSPASPYSPTSPNYSPTSP------SYSPTSPSYSPSSPTYSPSSP 465
SPS + SP++ R SP+S YSPTSP S TSP +SP SP ++P+SP YSP+SP
Sbjct: 1566 SPSSPFNTSPTSPRYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSP 1625
Query: 464 --YSSGASPDYSP-SAGYSPTLPGYSPSS 387
S SP YSP S G+SPT P YSP+S
Sbjct: 1626 GYQQSPTSPSYSPTSPGFSPTSPSYSPTS 1654
Score = 71.6 bits (174), Expect = 5e-11
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPA-----SPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSG 453
S +YSP++ L + SP SPTSP Y+PTSP +SPTSP +YSP+SP +S S
Sbjct: 1668 SPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFS-----GSP 1722
Query: 452 ASPDYSPSAGYSPTLPGYSPSS 387
SP S GYSPT P +SP+S
Sbjct: 1723 TSPGGPTSPGYSPTSPTFSPTS 1744
Score = 69.7 bits (169), Expect = 2e-10
Identities = 47/88 (53%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPY--SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SP A SP SP+SP+ SPTSP YSP+S YSPTSP S +SP + SSP S AS
Sbjct: 1554 SPHGARSPGGG-YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFM-SSPGFSPAS 1610
Query: 446 PDYSP-SAGYSPTLPGYSPSSTG-QYTP 369
P ++P S YSPT PGY S T Y+P
Sbjct: 1611 PVFAPTSPAYSPTSPGYQQSPTSPSYSP 1638
Score = 67.4 bits (163), Expect = 9e-10
Identities = 41/77 (53%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
+SP AR SP YSP+SP N SPTSP YSP+S YSP+SP S +SP +SP +SP+
Sbjct: 1553 FSPHGAR-SPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFM-SSPGFSPA 1609
Query: 428 AG-YSPTLPGYSPSSTG 381
+ ++PT P YSP+S G
Sbjct: 1610 SPVFAPTSPAYSPTSPG 1626
Score = 63.2 bits (152), Expect = 2e-08
Identities = 32/52 (61%), Positives = 40/52 (76%), Gaps = 4/52 (7%)
Frame = -1
Query: 605 YSPSNARLSPASP--YSPTSPNYS--PTSPSYSPTSPSYSPSSPTYSPSSPY 462
Y+P++ SP SP YSPTSPN+S PTSP PTSP YSP+SPT+SP+SP+
Sbjct: 1696 YTPTSPGWSPTSPETYSPTSPNFSGSPTSPG-GPTSPGYSPTSPTFSPTSPH 1746
[173][TOP]
>UniRef100_C0SE75 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0SE75_PARBP
Length = 2106
Score = 92.8 bits (229), Expect = 2e-17
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 22/104 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S ++P++ SP SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S SP
Sbjct: 1610 SPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSP 1669
Query: 443 DYSP-------------------SAGYSPTLPGYSPSSTGQYTP 369
YSP S Y+PT PG+SP+S Y+P
Sbjct: 1670 SYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1713
Score = 84.0 bits (206), Expect = 9e-15
Identities = 43/81 (53%), Positives = 56/81 (69%), Gaps = 3/81 (3%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTY--SPSSPYSSGAS 447
SPS YSP++ +S SP +SP +SP SP ++PTSP+YSP+SP Y SP+SP S S
Sbjct: 1581 SPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTS 1640
Query: 446 PDYSP-SAGYSPTLPGYSPSS 387
P +SP S YSPT P +SP+S
Sbjct: 1641 PGFSPTSPSYSPTSPSFSPAS 1661
Score = 82.4 bits (202), Expect = 3e-14
Identities = 47/89 (52%), Positives = 58/89 (65%), Gaps = 11/89 (12%)
Frame = -1
Query: 620 SPSIAY--SPSNARLSPASPYSPTSPNYSPTSP------SYSPTSPSYSPSSPTYSPSSP 465
SPS + SP++ R SP+S YSPTSP S TSP +SP SP ++P+SP YSP+SP
Sbjct: 1566 SPSSPFNTSPTSPRYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSP 1625
Query: 464 --YSSGASPDYSP-SAGYSPTLPGYSPSS 387
S SP YSP S G+SPT P YSP+S
Sbjct: 1626 GYQQSPTSPSYSPTSPGFSPTSPSYSPTS 1654
Score = 82.0 bits (201), Expect = 4e-14
Identities = 49/114 (42%), Positives = 63/114 (55%), Gaps = 36/114 (31%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA-- 450
SP SP++ SP SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP G+
Sbjct: 1624 SPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTG 1683
Query: 449 ---------SPDYSP-SAGYSPTLP-----------------------GYSPSS 387
SP Y+P S G+SPT P GYSP+S
Sbjct: 1684 RHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1737
Score = 70.1 bits (170), Expect = 1e-10
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPA-----SPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSG 453
S +YSP++ L + SP SPTSP Y+PTSP +SPTSP +YSP+SP +S S
Sbjct: 1668 SPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFS-----GSP 1722
Query: 452 ASPDYSPSAGYSPTLPGYSPS 390
SP S GYSPT P +SP+
Sbjct: 1723 TSPGGPTSPGYSPTSPTFSPT 1743
Score = 69.7 bits (169), Expect = 2e-10
Identities = 47/88 (53%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPY--SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SP A SP SP+SP+ SPTSP YSP+S YSPTSP S +SP + SSP S AS
Sbjct: 1554 SPHGARSPGGG-YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFM-SSPGFSPAS 1610
Query: 446 PDYSP-SAGYSPTLPGYSPSSTG-QYTP 369
P ++P S YSPT PGY S T Y+P
Sbjct: 1611 PVFAPTSPAYSPTSPGYQQSPTSPSYSP 1638
Score = 67.4 bits (163), Expect = 9e-10
Identities = 41/77 (53%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
+SP AR SP YSP+SP N SPTSP YSP+S YSP+SP S +SP +SP +SP+
Sbjct: 1553 FSPHGAR-SPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFM-SSPGFSPA 1609
Query: 428 AG-YSPTLPGYSPSSTG 381
+ ++PT P YSP+S G
Sbjct: 1610 SPVFAPTSPAYSPTSPG 1626
Score = 65.9 bits (159), Expect = 3e-09
Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 35/100 (35%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPS------------------YSPTSPSYSPS 492
S +YSP++ SPASP +SPTSP+YSPTSP+ Y+PTSP +SP+
Sbjct: 1647 SPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPT 1706
Query: 491 SP-TYSPSSPYSSGA---------------SPDYSPSAGY 420
SP TYSP+SP SG+ SP +SP+ +
Sbjct: 1707 SPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTCSF 1746
[174][TOP]
>UniRef100_Q5KGG3 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KGG3_CRYNE
Length = 1786
Score = 92.0 bits (227), Expect = 3e-17
Identities = 49/96 (51%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
S A+SP++ SP SP + TSP YSPTSP +SPTSP+YSP+SP YSP+SP S SP
Sbjct: 1677 SPAFSPTSPSYSPTSPAPFQATSPRYSPTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPA 1736
Query: 440 YSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGK 336
YSP S YSPT P Y G P+ G + + G+
Sbjct: 1737 YSPTSPAYSPTSPAY-----GGAAPNGGTAQQQNGQ 1767
Score = 87.0 bits (214), Expect = 1e-15
Identities = 53/111 (47%), Positives = 62/111 (55%), Gaps = 27/111 (24%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP------------------YSPTSPNYSPTSPSYSPTSPSYSP 495
SP+ + + R SP SP YSPTSP YSPTSP++SPTSPSYSP
Sbjct: 1630 SPAYGGAGAGNRASPYSPTSPAYSPTSPMGGITSPQYSPTSPRYSPTSPAFSPTSPSYSP 1689
Query: 494 SSPT--------YSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+SP YSP+SP S SP YSP S YSPT P YSP+S Y+P
Sbjct: 1690 TSPAPFQATSPRYSPTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPA-YSP 1739
Score = 86.3 bits (212), Expect = 2e-15
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 6/77 (7%)
Frame = -1
Query: 581 SPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPG 402
SPA YSPTSP YSPTSP +SPTSPS+SPSSPTYSP+SP GA + ++ YSPT P
Sbjct: 1595 SPA--YSPTSPQYSPTSPQFSPTSPSFSPSSPTYSPASPAYGGAGAG-NRASPYSPTSPA 1651
Query: 401 YSPSS------TGQYTP 369
YSP+S + QY+P
Sbjct: 1652 YSPTSPMGGITSPQYSP 1668
Score = 84.7 bits (208), Expect = 6e-15
Identities = 51/104 (49%), Positives = 59/104 (56%), Gaps = 22/104 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP 474
S ++SPS+ SPASP YSPTSP YSPTSP TSP YSP+SP YSP
Sbjct: 1616 SPSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSPAYSPTSPMGGITSPQYSPTSPRYSP 1675
Query: 473 SSPYSSGASPDYSP---------SAGYSPTLPGYSPSSTGQYTP 369
+SP S SP YSP S YSPT P +SP+S Y+P
Sbjct: 1676 TSPAFSPTSPSYSPTSPAPFQATSPRYSPTSPQFSPTSP-TYSP 1718
Score = 67.8 bits (164), Expect = 7e-10
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ SP SP YSPTSP YSPTSP+YSPTSP+Y ++P + + A P +
Sbjct: 1713 SPTYSPASPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYGGAAPNGGTAQQQNGQARPGW 1772
Query: 437 SPSAGYSPTLPGYSPS 390
+ GY G SPS
Sbjct: 1773 GNTGGY-----GTSPS 1783
[175][TOP]
>UniRef100_Q1E2G9 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
RepID=Q1E2G9_COCIM
Length = 1750
Score = 92.0 bits (227), Expect = 3e-17
Identities = 49/106 (46%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA 450
S ++P++ SP SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S
Sbjct: 1611 SPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPT 1670
Query: 449 SPDYSP-------------------SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S Y+PT PG+SP+S Y+P
Sbjct: 1671 SPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSP 1716
Score = 85.9 bits (211), Expect = 2e-15
Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 5/83 (6%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTY----SPSSPYSSG 453
SPS YSP++ +S SP TSP +SP SP+++PTSP+YSP+SP Y SP+SP S
Sbjct: 1582 SPSSGYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSP 1641
Query: 452 ASPDYSP-SAGYSPTLPGYSPSS 387
SP +SP S YSPT P +SP+S
Sbjct: 1642 TSPGFSPTSPSYSPTSPSFSPAS 1664
Score = 80.1 bits (196), Expect = 1e-13
Identities = 44/83 (53%), Positives = 54/83 (65%), Gaps = 11/83 (13%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPSY------SPTSPSYSPSSPTYSPSSP----YSSG 453
SP++ SP+S YSPTSP S TSP Y SP SP+++P+SP YSP+SP S
Sbjct: 1575 SPTSPGYSPSSGYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSP 1634
Query: 452 ASPDYSP-SAGYSPTLPGYSPSS 387
SP YSP S G+SPT P YSP+S
Sbjct: 1635 TSPSYSPTSPGFSPTSPSYSPTS 1657
Score = 71.2 bits (173), Expect = 6e-11
Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPA-----SPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSG 453
S +YSP++ L A SP SPTSP Y+PTSP +SPTSP +YSP+SP ++ S
Sbjct: 1671 SPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFA-----GSP 1725
Query: 452 ASPDYSPSAGYSPTLPGYSPSSTGQ 378
SP S GYSPT P ++P+S Q
Sbjct: 1726 TSPGGPTSPGYSPTSPTFNPTSPRQ 1750
Score = 63.9 bits (154), Expect = 1e-08
Identities = 40/78 (51%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = -1
Query: 599 PSNARLSPASPYSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAG 423
P SPA SP YSPTSP + SPTSP YSPSS YSP+SP S SP Y S G
Sbjct: 1550 PGFGGFSPAGARSPGG--YSPTSPFNTSPTSPGYSPSSG-YSPTSPGMSITSPRYMTSPG 1606
Query: 422 YSPTLPGYSPSSTGQYTP 369
+SP P ++P+S Y+P
Sbjct: 1607 FSPASPTFAPTSPA-YSP 1623
[176][TOP]
>UniRef100_C8VQG7 DNA-directed RNA polymerase (EC 2.7.7.6)
[Source:UniProtKB/TrEMBL;Acc:Q873Q6] n=2 Tax=Emericella
nidulans RepID=C8VQG7_EMENI
Length = 1745
Score = 92.0 bits (227), Expect = 3e-17
Identities = 48/103 (46%), Positives = 64/103 (62%), Gaps = 21/103 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPY----SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
S +++P++ SP SP SPTSP+YSPTSP +SPTSP+YSP+SP++SP+SP S S
Sbjct: 1609 SPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTS 1668
Query: 446 PDYSP-----------------SAGYSPTLPGYSPSSTGQYTP 369
P YSP S Y+PT PG+SP+S Y+P
Sbjct: 1669 PSYSPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQTYSP 1711
Score = 89.0 bits (219), Expect = 3e-16
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 11/95 (11%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-------YSPTSPNYSPTSPSYSPTSPSY---SPSSPTYSPS 471
SP+ +YSP++ + SP +SP SP+++PTSP+YSPTSP+Y SP+SP+YSP+
Sbjct: 1580 SPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSPT 1639
Query: 470 SPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP S SP+YSP S +SPT P +SP+S Y+P
Sbjct: 1640 SPGFSPTSPNYSPTSPSFSPTSPAFSPTSP-SYSP 1673
Score = 78.6 bits (192), Expect = 4e-13
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 8/92 (8%)
Frame = -1
Query: 620 SPSIAYS--PSNARLSPASPYSPTSPNY---SP---TSPSYSPTSPSYSPSSPTYSPSSP 465
SPS +S P++ SP S YSPTSP SP TSP +SP SPS++P+SP YSP+SP
Sbjct: 1565 SPSSPFSANPTSPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSP 1624
Query: 464 YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
ASP SPS YSPT PG+SP+S Y+P
Sbjct: 1625 AYGQASPT-SPS--YSPTSPGFSPTSP-NYSP 1652
Score = 77.8 bits (190), Expect = 7e-13
Identities = 46/95 (48%), Positives = 56/95 (58%), Gaps = 25/95 (26%)
Frame = -1
Query: 596 SNARLSPASPYS--PTSPNYSP-------------------TSPSYSPTSPSYSPSSPTY 480
S A SP+SP+S PTSP YSP TSP +SP SPS++P+SP Y
Sbjct: 1560 SPAGYSPSSPFSANPTSPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAY 1619
Query: 479 SPSSP---YSSGASPDYSP-SAGYSPTLPGYSPSS 387
SP+SP +S SP YSP S G+SPT P YSP+S
Sbjct: 1620 SPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTS 1654
Score = 73.2 bits (178), Expect = 2e-11
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPA---SPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGAS 447
S +YSP++ + A SP SPTSP Y+PTSP +SPTSP +YSP+SP ++ S S
Sbjct: 1668 SPSYSPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFA-----GSPTS 1722
Query: 446 PDYSPSAGYSPTLPGYSPSSTGQ 378
P S GYSPT P +SP+S Q
Sbjct: 1723 PGGPTSPGYSPTSPAFSPTSPRQ 1745
Score = 60.1 bits (144), Expect = 1e-07
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
Y PS SP + + YSP+SP S +PTSP YSP+S +YSP+SP SP + S
Sbjct: 1545 YQPSGG-FGGFSPAATSPAGYSPSSPFSANPTSPGYSPTS-SYSPTSPGMGITSPRFMTS 1602
Query: 428 AGYSPTLPGYSPSSTGQYTP 369
G+SP P ++P+S Y+P
Sbjct: 1603 PGFSPASPSFAPTSPA-YSP 1621
[177][TOP]
>UniRef100_C5PAJ4 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735 delta
SOWgp RepID=C5PAJ4_COCP7
Length = 1746
Score = 92.0 bits (227), Expect = 3e-17
Identities = 49/106 (46%), Positives = 63/106 (59%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA 450
S ++P++ SP SP SPTSP+YSPTSP +SPTSPSYSP+SP++SP+SP S
Sbjct: 1611 SPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPT 1670
Query: 449 SPDYSP-------------------SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S Y+PT PG+SP+S Y+P
Sbjct: 1671 SPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSP 1716
Score = 85.9 bits (211), Expect = 2e-15
Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 5/83 (6%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTY----SPSSPYSSG 453
SPS YSP++ +S SP TSP +SP SP+++PTSP+YSP+SP Y SP+SP S
Sbjct: 1582 SPSSGYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSP 1641
Query: 452 ASPDYSP-SAGYSPTLPGYSPSS 387
SP +SP S YSPT P +SP+S
Sbjct: 1642 TSPGFSPTSPSYSPTSPSFSPAS 1664
Score = 81.3 bits (199), Expect = 6e-14
Identities = 49/110 (44%), Positives = 62/110 (56%), Gaps = 36/110 (32%)
Frame = -1
Query: 608 AYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA------ 450
A SP++ SP SP +SPTSP+YSPTSPS+SP SP++SP+SP+YSP+SP GA
Sbjct: 1631 AQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLS 1690
Query: 449 -----SPDYSP-SAGYSPTLP-----------------------GYSPSS 387
SP Y+P S G+SPT P GYSP+S
Sbjct: 1691 PTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFAGSPTSPGGPTSPGYSPTS 1740
Score = 80.1 bits (196), Expect = 1e-13
Identities = 44/83 (53%), Positives = 54/83 (65%), Gaps = 11/83 (13%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPSY------SPTSPSYSPSSPTYSPSSP----YSSG 453
SP++ SP+S YSPTSP S TSP Y SP SP+++P+SP YSP+SP S
Sbjct: 1575 SPTSPGYSPSSGYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSPAYSPTSPGYGQAQSP 1634
Query: 452 ASPDYSP-SAGYSPTLPGYSPSS 387
SP YSP S G+SPT P YSP+S
Sbjct: 1635 TSPSYSPTSPGFSPTSPSYSPTS 1657
Score = 68.9 bits (167), Expect = 3e-10
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPA-----SPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSG 453
S +YSP++ L A SP SPTSP Y+PTSP +SPTSP +YSP+SP ++ S
Sbjct: 1671 SPSYSPTSPALGGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFA-----GSP 1725
Query: 452 ASPDYSPSAGYSPTLPGYSPS 390
SP S GYSPT P ++P+
Sbjct: 1726 TSPGGPTSPGYSPTSPTFNPT 1746
Score = 63.9 bits (154), Expect = 1e-08
Identities = 40/78 (51%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = -1
Query: 599 PSNARLSPASPYSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAG 423
P SPA SP YSPTSP + SPTSP YSPSS YSP+SP S SP Y S G
Sbjct: 1550 PGFGGFSPAGARSPGG--YSPTSPFNTSPTSPGYSPSSG-YSPTSPGMSITSPRYMTSPG 1606
Query: 422 YSPTLPGYSPSSTGQYTP 369
+SP P ++P+S Y+P
Sbjct: 1607 FSPASPTFAPTSPA-YSP 1623
[178][TOP]
>UniRef100_Q0D054 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0D054_ASPTN
Length = 1742
Score = 91.7 bits (226), Expect = 5e-17
Identities = 49/103 (47%), Positives = 61/103 (59%), Gaps = 21/103 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPY----SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
S A+ P++ SP SP SPTSP+YSPTSP +SPTSP+YSP+SP SP+SP S S
Sbjct: 1610 SPAFGPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPNLSPASPVFSPTS 1669
Query: 446 PDYSP-----------------SAGYSPTLPGYSPSSTGQYTP 369
P YSP S Y+PT PG+SP+S Y+P
Sbjct: 1670 PSYSPTSPALGAGRNMSPTSPTSPKYTPTSPGWSPTSPQSYSP 1712
Score = 85.9 bits (211), Expect = 2e-15
Identities = 47/95 (49%), Positives = 61/95 (64%), Gaps = 17/95 (17%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP------YSPTSPNYSPTSPSYSPTSPSY---SPSSPTYSPSS 468
SPS +YSP++ + SP +SP SP + PTSP+YSPTSP+Y SP+SP+YSP+S
Sbjct: 1582 SPSSSYSPTSPGMGITSPRMTSPGFSPASPAFGPTSPAYSPTSPAYGQASPTSPSYSPTS 1641
Query: 467 PYSSGASPDYSP--------SAGYSPTLPGYSPSS 387
P S SP+YSP S +SPT P YSP+S
Sbjct: 1642 PGFSPTSPNYSPTSPNLSPASPVFSPTSPSYSPTS 1676
Score = 71.2 bits (173), Expect = 6e-11
Identities = 43/83 (51%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPA---SPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSGAS 447
S +YSP++ L SP SPTSP Y+PTSP +SPTSP SYSP+SP + G S
Sbjct: 1669 SPSYSPTSPALGAGRNMSPTSPTSPKYTPTSPGWSPTSPQSYSPTSP--------NIGGS 1720
Query: 446 PDYSPSAGYSPTLPGYSPSSTGQ 378
P SP YSPT P YSP+S Q
Sbjct: 1721 PT-SPGGAYSPTSPTYSPTSPRQ 1742
Score = 66.6 bits (161), Expect = 2e-09
Identities = 39/76 (51%), Positives = 46/76 (60%)
Frame = -1
Query: 608 AYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
A SPS SP+S YSPTSP TSP TSP +SP+SP + P+SP S SP Y +
Sbjct: 1576 ATSPS---YSPSSSYSPTSPGMGITSPRM--TSPGFSPASPAFGPTSPAYSPTSPAYGQA 1630
Query: 428 AGYSPTLPGYSPSSTG 381
SPT P YSP+S G
Sbjct: 1631 ---SPTSPSYSPTSPG 1643
Score = 55.1 bits (131), Expect = 5e-06
Identities = 43/89 (48%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSP-NYSPTSP-SYSPTSPSYSPSSPTYSPSSP-----YSSGAS 447
Y P+ SP +PTSP YSP SP S TSPSYSPSS +YSP+SP S
Sbjct: 1546 YQPTAGFGGGFSP-APTSPLGYSPGSPFSGGATSPSYSPSS-SYSPTSPGMGITSPRMTS 1603
Query: 446 PDYSP-SAGYSPTLPGYSPSST--GQYTP 369
P +SP S + PT P YSP+S GQ +P
Sbjct: 1604 PGFSPASPAFGPTSPAYSPTSPAYGQASP 1632
[179][TOP]
>UniRef100_C1H3Q4 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1H3Q4_PARBA
Length = 1748
Score = 91.7 bits (226), Expect = 5e-17
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 22/104 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP---YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S ++P++ SP SP SPTSP+YSPTSP +SPTSP+YSP+SP++SP+SP S SP
Sbjct: 1615 SPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSP 1674
Query: 443 DYSP-------------------SAGYSPTLPGYSPSSTGQYTP 369
YSP S Y+PT PG+SP+S Y+P
Sbjct: 1675 SYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSP 1718
Score = 88.6 bits (218), Expect = 4e-16
Identities = 49/84 (58%), Positives = 59/84 (70%), Gaps = 4/84 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S +SP++ +P SP YSPTSP Y SPTSPSYSPTSP +SP+SP YSP+SP S ASP
Sbjct: 1608 SPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASP 1667
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQY 375
+SP S YSPT P STG++
Sbjct: 1668 AFSPTSPSYSPTSPALG-GSTGRH 1690
Score = 84.0 bits (206), Expect = 9e-15
Identities = 43/81 (53%), Positives = 56/81 (69%), Gaps = 3/81 (3%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTY--SPSSPYSSGAS 447
SPS YSP++ +S SP +SP +SP SP ++PTSP+YSP+SP Y SP+SP S S
Sbjct: 1586 SPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTS 1645
Query: 446 PDYSP-SAGYSPTLPGYSPSS 387
P +SP S YSPT P +SP+S
Sbjct: 1646 PGFSPTSPNYSPTSPSFSPAS 1666
Score = 84.0 bits (206), Expect = 9e-15
Identities = 50/114 (43%), Positives = 63/114 (55%), Gaps = 36/114 (31%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA-- 450
SP SP++ SP SP +SPTSPNYSPTSPS+SP SP++SP+SP+YSP+SP G+
Sbjct: 1629 SPGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTG 1688
Query: 449 ---------SPDYSP-SAGYSPTLP-----------------------GYSPSS 387
SP Y+P S G+SPT P GYSP+S
Sbjct: 1689 RHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTS 1742
Score = 82.4 bits (202), Expect = 3e-14
Identities = 47/89 (52%), Positives = 58/89 (65%), Gaps = 11/89 (12%)
Frame = -1
Query: 620 SPSIAY--SPSNARLSPASPYSPTSPNYSPTSP------SYSPTSPSYSPSSPTYSPSSP 465
SPS + SP++ R SP+S YSPTSP S TSP +SP SP ++P+SP YSP+SP
Sbjct: 1571 SPSSPFNTSPTSPRYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSPAYSPTSP 1630
Query: 464 --YSSGASPDYSP-SAGYSPTLPGYSPSS 387
S SP YSP S G+SPT P YSP+S
Sbjct: 1631 GYQQSPTSPSYSPTSPGFSPTSPNYSPTS 1659
Score = 70.1 bits (170), Expect = 1e-10
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPA-----SPYSPTSPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPYSSG 453
S +YSP++ L + SP SPTSP Y+PTSP +SPTSP +YSP+SP +S S
Sbjct: 1673 SPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFS-----GSP 1727
Query: 452 ASPDYSPSAGYSPTLPGYSPS 390
SP S GYSPT P +SP+
Sbjct: 1728 TSPGGPTSPGYSPTSPTFSPT 1748
Score = 69.7 bits (169), Expect = 2e-10
Identities = 47/88 (53%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPY--SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SP A SP SP+SP+ SPTSP YSP+S YSPTSP S +SP + SSP S AS
Sbjct: 1559 SPHGARSPGGG-YSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFM-SSPGFSPAS 1615
Query: 446 PDYSP-SAGYSPTLPGYSPSSTG-QYTP 369
P ++P S YSPT PGY S T Y+P
Sbjct: 1616 PVFAPTSPAYSPTSPGYQQSPTSPSYSP 1643
Score = 67.4 bits (163), Expect = 9e-10
Identities = 41/77 (53%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
+SP AR SP YSP+SP N SPTSP YSP+S YSP+SP S +SP +SP +SP+
Sbjct: 1558 FSPHGAR-SPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFM-SSPGFSPA 1614
Query: 428 AG-YSPTLPGYSPSSTG 381
+ ++PT P YSP+S G
Sbjct: 1615 SPVFAPTSPAYSPTSPG 1631
[180][TOP]
>UniRef100_B6H9U6 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6H9U6_PENCW
Length = 1733
Score = 91.7 bits (226), Expect = 5e-17
Identities = 48/103 (46%), Positives = 62/103 (60%), Gaps = 21/103 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPY----SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
S + P++ SP SP SPTSP+YSPTSP +SPTSP+YSP+SP++SP+SP S S
Sbjct: 1600 SPTFQPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTS 1659
Query: 446 PDYSP-----------------SAGYSPTLPGYSPSSTGQYTP 369
P YSP S Y+PT PG+SP+S Y+P
Sbjct: 1660 PSYSPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQSYSP 1702
Score = 85.5 bits (210), Expect = 3e-15
Identities = 47/91 (51%), Positives = 61/91 (67%), Gaps = 13/91 (14%)
Frame = -1
Query: 620 SPSIAYSPSNARLSP-ASP-YSPTSPNYSPTSPSYSPTSPSY---SPSSPTYSPSSPYSS 456
SPS +YSP++ + SP +SP SP + PTSP+YSPTSP+Y SP+SP+YSP+SP S
Sbjct: 1576 SPSSSYSPTSPGIGMMTSPGFSPASPTFQPTSPAYSPTSPAYGQASPTSPSYSPTSPGFS 1635
Query: 455 GASPDYSP--------SAGYSPTLPGYSPSS 387
SP+YSP S +SPT P YSP+S
Sbjct: 1636 PTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1666
Score = 82.4 bits (202), Expect = 3e-14
Identities = 48/94 (51%), Positives = 59/94 (62%), Gaps = 18/94 (19%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPS----------------YSPTSPSYSPSSP-TY 480
YSP++ SPASP +SPTSP+YSPTSP+ Y+PTSP +SP+SP +Y
Sbjct: 1641 YSPTSPSFSPASPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQSY 1700
Query: 479 SPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQ 378
SP+SP SG SP S YSPT P YSP+S Q
Sbjct: 1701 SPTSPNFSG-SPTSPTSPAYSPTSPAYSPTSPRQ 1733
Score = 71.6 bits (174), Expect = 5e-11
Identities = 48/95 (50%), Positives = 55/95 (57%), Gaps = 19/95 (20%)
Frame = -1
Query: 596 SNARLSPASPYSPTSP-NYSPTSPSYSP--------------TSPSYSPSSPTYSPSSPY 462
S A SP YSPTSP N SPTSP YSP TSP +SP+SPT+ P+SP
Sbjct: 1551 SPAARSPGG-YSPTSPFNTSPTSPGYSPSSSYSPTSPGIGMMTSPGFSPASPTFQPTSPA 1609
Query: 461 SSGASPDY---SP-SAGYSPTLPGYSPSSTGQYTP 369
S SP Y SP S YSPT PG+SP+S Y+P
Sbjct: 1610 YSPTSPAYGQASPTSPSYSPTSPGFSPTSP-NYSP 1643
Score = 60.1 bits (144), Expect = 1e-07
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSP-YSSGASPDYSP 432
Y + + SP + + YSPTSP + SPTSP YSPSS +YSP+SP SP +SP
Sbjct: 1540 YQATTSTFGGFSPAARSPGGYSPTSPFNTSPTSPGYSPSS-SYSPTSPGIGMMTSPGFSP 1598
Query: 431 -SAGYSPTLPGYSPSST--GQYTP 369
S + PT P YSP+S GQ +P
Sbjct: 1599 ASPTFQPTSPAYSPTSPAYGQASP 1622
[181][TOP]
>UniRef100_A2QAT7 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QAT7_ASPNC
Length = 1747
Score = 91.7 bits (226), Expect = 5e-17
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 22/104 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPY----SPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
S +++P++ SP SP SPTSP+YSPTSP +SPTSP+YSP+SP++SP+SP S S
Sbjct: 1610 SPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTS 1669
Query: 446 PDYSP------------------SAGYSPTLPGYSPSSTGQYTP 369
P YSP S Y+PT PG+SP+S Y+P
Sbjct: 1670 PSYSPTSPAVGGVGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSP 1713
Score = 87.0 bits (214), Expect = 1e-15
Identities = 46/97 (47%), Positives = 64/97 (65%), Gaps = 19/97 (19%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSY---SPSSPTYSP 474
SP+ +YSP++ ++ SP +SP SP+++PTSP+YSPTSP+Y SP+SP+YSP
Sbjct: 1580 SPTSSYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSPAYSPTSPAYGQASPTSPSYSP 1639
Query: 473 SSPYSSGASPDYSP--------SAGYSPTLPGYSPSS 387
+SP S SP+YSP S +SPT P YSP+S
Sbjct: 1640 TSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTS 1676
Score = 82.8 bits (203), Expect = 2e-14
Identities = 48/97 (49%), Positives = 61/97 (62%), Gaps = 21/97 (21%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPS-----------------YSPTSPSYSPSSP-T 483
YSP++ SPASP +SPTSP+YSPTSP+ Y+PTSP +SP+SP T
Sbjct: 1651 YSPTSPSFSPASPAFSPTSPSYSPTSPAVGGVGRHLSPTSPTSPKYTPTSPGWSPTSPQT 1710
Query: 482 YSPSSPYSSGA--SPDYSPSAGYSPTLPGYSPSSTGQ 378
YSP+SP +G+ SP S GYSPT P +SP+S Q
Sbjct: 1711 YSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSPTSPRQ 1747
Score = 82.0 bits (201), Expect = 4e-14
Identities = 46/91 (50%), Positives = 58/91 (63%), Gaps = 13/91 (14%)
Frame = -1
Query: 620 SPSIAYS--PSNARLSPASPYSP-------TSPNYSPTSPSYSPTSPSYSPSSPTYSPSS 468
SPS +S P++ SP S YSP TSP + TSP +SP SPS++P+SP YSP+S
Sbjct: 1565 SPSSPFSANPTSPGYSPTSSYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSPAYSPTS 1624
Query: 467 P---YSSGASPDYSP-SAGYSPTLPGYSPSS 387
P +S SP YSP S G+SPT P YSP+S
Sbjct: 1625 PAYGQASPTSPSYSPTSPGFSPTSPNYSPTS 1655
Score = 66.6 bits (161), Expect = 2e-09
Identities = 42/80 (52%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
Frame = -1
Query: 596 SNARLSPASPYSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAG 423
S A SPA YSP+SP + +PTSP YSPTS SYSP+SP + +SP SP +SP S
Sbjct: 1555 SPAATSPAG-YSPSSPFSANPTSPGYSPTS-SYSPTSPGMAITSPRFMSTSPGFSPASPS 1612
Query: 422 YSPTLPGYSPSST--GQYTP 369
++PT P YSP+S GQ +P
Sbjct: 1613 FAPTSPAYSPTSPAYGQASP 1632
Score = 58.5 bits (140), Expect = 4e-07
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPTSPNYSPTSP-SYSPTSPSYSPSSPTYSPSSPYSSGASPDY-SP 432
Y P+ SP + + YSP+SP S +PTSP YSP+S +YSP+SP + SP + S
Sbjct: 1544 YQPTGGFGGGFSPAATSPAGYSPSSPFSANPTSPGYSPTS-SYSPTSPGMAITSPRFMST 1602
Query: 431 SAGYSPTLPGYSPSSTGQYTP 369
S G+SP P ++P+S Y+P
Sbjct: 1603 SPGFSPASPSFAPTSPA-YSP 1622
[182][TOP]
>UniRef100_Q54LJ4 Type A von Willebrand factor domain-containing protein n=1
Tax=Dictyostelium discoideum RepID=Q54LJ4_DICDI
Length = 2563
Score = 91.3 bits (225), Expect = 6e-17
Identities = 46/77 (59%), Positives = 52/77 (67%)
Frame = -1
Query: 599 PSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGY 420
P + + PYSPTSP Y PTSPSYSPTSPSYSP+SP+YSP+SP S SP YS S Y
Sbjct: 1835 PPSLFFQASQPYSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLY 1894
Query: 419 SPTLPGYSPSSTGQYTP 369
+ T YSP S YTP
Sbjct: 1895 ASTSQSYSPVSP-SYTP 1910
Score = 90.1 bits (222), Expect = 1e-16
Identities = 55/103 (53%), Positives = 65/103 (63%), Gaps = 15/103 (14%)
Frame = -1
Query: 617 PSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YS----- 459
PS+ + S SP SP Y PTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP YS
Sbjct: 1836 PSLFFQASQP-YSPTSPFYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSTSPLY 1894
Query: 458 -------SGASPDYSP-SAGYSPTLPGYSPSSTGQYTPHEGDK 354
S SP Y+P S Y+PT+P YSP S Y P + K
Sbjct: 1895 ASTSQSYSPVSPSYTPTSLLYAPTIPSYSPVSP-SYAPTKPSK 1936
Score = 65.9 bits (159), Expect = 3e-09
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 14/77 (18%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYS 477
S +YSP++ SP SP YSP SP+Y+PTS Y+PT PSYSP SP+Y+
Sbjct: 1871 SPSYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSPSYTPTSLLYAPTIPSYSPVSPSYA 1930
Query: 476 PSSPYSSGASPDYSPSA 426
P+ P YSPS+
Sbjct: 1931 PTKPSKLPVLTSYSPSS 1947
Score = 63.9 bits (154), Expect = 1e-08
Identities = 42/91 (46%), Positives = 48/91 (52%), Gaps = 18/91 (19%)
Frame = -1
Query: 587 RLSPASPYSPTSPNYS------------PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
R +P P P P+ S S YSPTSP Y P+SP+YSP+SP S SP
Sbjct: 1813 RGAPPPPQPPPPPSTSLGRGAPPPSLFFQASQPYSPTSPFYIPTSPSYSPTSPSYSPTSP 1872
Query: 443 DYSP-SAGYSPTLPGYSPS----STGQ-YTP 369
YSP S YSPT P YS S ST Q Y+P
Sbjct: 1873 SYSPTSPSYSPTSPSYSTSPLYASTSQSYSP 1903
Score = 61.2 bits (147), Expect = 7e-08
Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 13/96 (13%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSP-------TYSPSSP 465
S S Y+ ++ SP SP Y+PTS Y+PT PSYSP SPSY+P+ P +YSPSSP
Sbjct: 1889 STSPLYASTSQSYSPVSPSYTPTSLLYAPTIPSYSPVSPSYAPTKPSKLPVLTSYSPSSP 1948
Query: 464 -YSSGASPDYSPSAGYS----PTLPGYSPSSTGQYT 372
+S + + S + + P + GYS ST ++
Sbjct: 1949 SFSKSKAKEESTLSEINLPSKPMVAGYSRMSTVSFS 1984
[183][TOP]
>UniRef100_B3L428 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3L428_PLAKH
Length = 2353
Score = 91.3 bits (225), Expect = 6e-17
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S AY+ ++ + SP SP YSPTSP Y PTSP YSPTSP YSP+SP YSP+SP S SP Y
Sbjct: 2188 SPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQY 2247
Query: 437 SPSAGY--SPTLPGYSP 393
SP++ SP+ P YSP
Sbjct: 2248 SPTSPVPNSPSSPHYSP 2264
Score = 79.0 bits (193), Expect = 3e-13
Identities = 41/67 (61%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Frame = -1
Query: 566 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS 390
+S SP Y+ TSP YSPTSP YSP+SP Y P+SP S SP YSP S YSPT P YSP+
Sbjct: 2184 HSVLSPAYAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2243
Query: 389 STGQYTP 369
S QY+P
Sbjct: 2244 SP-QYSP 2249
Score = 75.5 bits (184), Expect = 3e-12
Identities = 45/77 (58%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Frame = -1
Query: 584 LSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGASPDYSP-SAGY 420
LSPA Y+ TSP YSPTSP YSPTSP Y P+SP YSP SP SP YSP S Y
Sbjct: 2187 LSPA--YAVTSPKYSPTSPKYSPTSPKYMPTSPKYSPTSPKYSP----TSPKYSPTSPKY 2240
Query: 419 SPTLPGYSPSSTGQYTP 369
SPT P YSP+S +P
Sbjct: 2241 SPTSPQYSPTSPVPNSP 2257
Score = 58.5 bits (140), Expect = 4e-07
Identities = 42/119 (35%), Positives = 53/119 (44%), Gaps = 19/119 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSP------------------SYSPTSPSYSPSSPT 483
YSP++ + SP SP YSPTSP YSPTSP +SPTSP+YS SSP
Sbjct: 2226 YSPTSPKYSPTSPKYSPTSPQYSPTSPVPNSPSSPHYSPYAIASPKFSPTSPAYSISSPV 2285
Query: 482 YSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGN 306
Y SS + + P P Y S Q H D + + A+ D+ N
Sbjct: 2286 YDQSS---------NARNRNQHPLSPAYILQSPVQVKQHIQDVSVFSPIQQANADEAQN 2335
[184][TOP]
>UniRef100_Q7SDN0 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q7SDN0_NEUCR
Length = 1752
Score = 90.9 bits (224), Expect = 8e-17
Identities = 59/112 (52%), Positives = 72/112 (64%), Gaps = 15/112 (13%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP---YSPTSPNYSPTSPSYSP-------TSPSYSPSSPTYSP 474
SPS + SP+ AR SP SP +SPTSP+YSPTSPSYSP TSPSYSP+SPT+SP
Sbjct: 1641 SPSYSPASPAAARYSPTSPAQQFSPTSPSYSPTSPSYSPASPAFQATSPSYSPASPTWSP 1700
Query: 473 SSPYS-SGASPDY--SPSAGYSPTLP-GYSPSSTGQYTPHEGDKKDKTGKKD 330
+SP + S SP + SP SPT P GYSP+S QY+P + + G D
Sbjct: 1701 TSPDAYSPTSPSFQRSPGQQLSPTSPTGYSPTSP-QYSPRTPGRNNSGGNGD 1751
Score = 80.1 bits (196), Expect = 1e-13
Identities = 45/94 (47%), Positives = 62/94 (65%), Gaps = 10/94 (10%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSY----------SPTSPSYSPSSPTYSPS 471
SP+ YSPS+ L A ++ +SP +SP+SPS+ SPTSPSYSP+SP+YSP+
Sbjct: 1589 SPAAGYSPSSPLLDSAGRFA-SSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPA 1647
Query: 470 SPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
SP ++ SP SP+ +SPT P YSP+S Y+P
Sbjct: 1648 SPAAARYSPT-SPAQQFSPTSPSYSPTSP-SYSP 1679
Score = 63.2 bits (152), Expect = 2e-08
Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 20/88 (22%)
Frame = -1
Query: 572 SPYSPTSP----NYSPTSPS--YSP------------TSPSYSPSSPTYSPSSPYSSGAS 447
SP++PTSP YSP+SP+ YSP +SP +SPSSP++SP+SP S
Sbjct: 1572 SPFTPTSPFSYGGYSPSSPAAGYSPSSPLLDSAGRFASSPQFSPSSPSFSPTSPMLRPGS 1631
Query: 446 PDYSPSAGYSPTLPGYSPSS--TGQYTP 369
P SPS YSPT P YSP+S +Y+P
Sbjct: 1632 PT-SPS--YSPTSPSYSPASPAAARYSP 1656
[185][TOP]
>UniRef100_B6QAY2 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224
RepID=B6QAY2_PENMQ
Length = 1744
Score = 90.1 bits (222), Expect = 1e-16
Identities = 55/114 (48%), Positives = 67/114 (58%), Gaps = 30/114 (26%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP----------------------YSPTSPNYSPTSPSYSPTSP 507
SPS +YSPS+ +S SP YSPTSP++ TSPSYSPTSP
Sbjct: 1581 SPSSSYSPSSPNMSVTSPRFMSTSPGFSPQSPAFAITSPAYSPTSPSFQATSPSYSPTSP 1640
Query: 506 SYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPG-----YSPS--STGQYTP 369
+SPSSP YSPSSP S ASP +SPS+ YSPT P +SPS S+ +Y+P
Sbjct: 1641 RFSPSSPNYSPSSPNFSPASPAFSPSSPTYSPTSPAIGGRQFSPSSPSSPKYSP 1694
Score = 89.4 bits (220), Expect = 2e-16
Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSNARL-------SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S AYSP++ SP SP +SP+SPNYSP+SP++SP SP++SPSSPTYSP+SP
Sbjct: 1618 SPAYSPTSPSFQATSPSYSPTSPRFSPSSPNYSPSSPNFSPASPAFSPSSPTYSPTSPAI 1677
Query: 458 SGA--SPDYSPSAGYSPTLPGYSPSSTGQYTP 369
G SP S YSP PG+SP+S Y+P
Sbjct: 1678 GGRQFSPSSPSSPKYSPASPGWSPTSPEIYSP 1709
Score = 75.9 bits (185), Expect = 3e-12
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 8/80 (10%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYS-------PTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
SP + SP+S YSP+SPN S TSP +SP SP+++ +SP YSP+SP SP
Sbjct: 1574 SPVSPGYSPSSSYSPSSPNMSVTSPRFMSTSPGFSPQSPAFAITSPAYSPTSPSFQATSP 1633
Query: 443 DYSP-SAGYSPTLPGYSPSS 387
YSP S +SP+ P YSPSS
Sbjct: 1634 SYSPTSPRFSPSSPNYSPSS 1653
Score = 73.6 bits (179), Expect = 1e-11
Identities = 46/96 (47%), Positives = 57/96 (59%), Gaps = 20/96 (20%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPS---------------YSPTSPSYSPSSP-TYS 477
YSPS+ SPASP +SP+SP YSPTSP+ YSP SP +SP+SP YS
Sbjct: 1649 YSPSSPNFSPASPAFSPSSPTYSPTSPAIGGRQFSPSSPSSPKYSPASPGWSPTSPEIYS 1708
Query: 476 PSSP--YSSGASPDY-SPSAGYSPTLPGYSPSSTGQ 378
P+SP + S SP + S YSPT P Y+P+S Q
Sbjct: 1709 PTSPNIHGSPTSPARGATSPSYSPTSPQYNPTSPRQ 1744
Score = 69.7 bits (169), Expect = 2e-10
Identities = 42/83 (50%), Positives = 49/83 (59%), Gaps = 13/83 (15%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPY---------SPTSPNYSPTSPSYSPTSPS-YSPSSPTY--SPS 471
S A+SPS+ SP SP SP+SP YSP SP +SPTSP YSP+SP SP+
Sbjct: 1660 SPAFSPSSPTYSPTSPAIGGRQFSPSSPSSPKYSPASPGWSPTSPEIYSPTSPNIHGSPT 1719
Query: 470 SPYSSGASPDYSP-SAGYSPTLP 405
SP SP YSP S Y+PT P
Sbjct: 1720 SPARGATSPSYSPTSPQYNPTSP 1742
Score = 66.6 bits (161), Expect = 2e-09
Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 8/82 (9%)
Frame = -1
Query: 608 AYSPSNA----RLSPASP--YSPTSP-NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGA 450
AY PS +P SP YSPTSP N SP SP YSP+S SYSPSSP S +SP
Sbjct: 1545 AYQPSGGLGGFSPAPQSPGGYSPTSPFNTSPVSPGYSPSS-SYSPSSPNMSVTSPRFMST 1603
Query: 449 SPDYSP-SAGYSPTLPGYSPSS 387
SP +SP S ++ T P YSP+S
Sbjct: 1604 SPGFSPQSPAFAITSPAYSPTS 1625
[186][TOP]
>UniRef100_Q4P7Q0 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4P7Q0_USTMA
Length = 1774
Score = 88.6 bits (218), Expect = 4e-16
Identities = 51/96 (53%), Positives = 64/96 (66%), Gaps = 12/96 (12%)
Frame = -1
Query: 620 SPSIAYSPSNA-RLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT---------YSP 474
SP+ Y + + + SPASP +SPTSPNYSP SP+Y+PTSP YSP+SP +SP
Sbjct: 1638 SPAGRYGAATSPQYSPASPKFSPTSPNYSPASPAYTPTSPVYSPTSPAMAGRGGGKGFSP 1697
Query: 473 SSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
+SP S SP YSP S +SPT P YSP+S QY+P
Sbjct: 1698 TSPAYSPTSPQYSPASPAFSPTSPQYSPASP-QYSP 1732
Score = 87.4 bits (215), Expect = 9e-16
Identities = 51/89 (57%), Positives = 60/89 (67%), Gaps = 7/89 (7%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPT---YSPSSP---YSSG 453
S AYSP++ R+ + TSP+YSPTSPSYSP SP+YSPSSP YSPSSP Y +
Sbjct: 1591 SPAYSPTSPRIFGGA----TSPSYSPTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAA 1646
Query: 452 ASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S +SPT P YSP+S YTP
Sbjct: 1647 TSPQYSPASPKFSPTSPNYSPASPA-YTP 1674
Score = 85.1 bits (209), Expect = 4e-15
Identities = 51/106 (48%), Positives = 64/106 (60%), Gaps = 24/106 (22%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSP---NYSP----------TSPSYSPTSPSYSPSSPTYS 477
S +YSP++ SPASP YSP+SP YSP TSP YSP SP +SP+SP YS
Sbjct: 1607 SPSYSPTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSPQYSPASPKFSPTSPNYS 1666
Query: 476 PSSPYSSGASPDYSPSA----------GYSPTLPGYSPSSTGQYTP 369
P+SP + SP YSP++ G+SPT P YSP+S QY+P
Sbjct: 1667 PASPAYTPTSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTSP-QYSP 1711
Score = 84.3 bits (207), Expect = 7e-15
Identities = 50/104 (48%), Positives = 63/104 (60%), Gaps = 20/104 (19%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP 474
SPS SP+ A SP+SP YSP SP +SPTSP+YSP SP+Y+P+SP YSP
Sbjct: 1625 SPS---SPAGAGYSPSSPAGRYGAATSPQYSPASPKFSPTSPNYSPASPAYTPTSPVYSP 1681
Query: 473 SSPYSSG--ASPDYSP-SAGYSPTLPGYSPSS------TGQYTP 369
+SP +G +SP S YSPT P YSP+S + QY+P
Sbjct: 1682 TSPAMAGRGGGKGFSPTSPAYSPTSPQYSPASPAFSPTSPQYSP 1725
Score = 79.7 bits (195), Expect = 2e-13
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 10/73 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP----------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
S AY+P++ SP SP +SPTSP YSPTSP YSP SP++SP+SP YSP+SP
Sbjct: 1669 SPAYTPTSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTSPQYSPASPAFSPTSPQYSPASP 1728
Query: 464 YSSGASPDYSPSA 426
S SP YSP++
Sbjct: 1729 QYSPTSPQYSPTS 1741
Score = 74.7 bits (182), Expect = 6e-12
Identities = 41/79 (51%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
SP++A SP SP YSPTSP YSP SP++SPTSP YSP+SP YSP+SP S SP
Sbjct: 1683 SPAMAGRGGGKGFSPTSPAYSPTSPQYSPASPAFSPTSPQYSPASPQYSPTSPQYSPTSP 1742
Query: 443 DYSPSAGYSPTLPGYSPSS 387
G S PG + +S
Sbjct: 1743 AMG-MGGASAGGPGAAAAS 1760
Score = 72.8 bits (177), Expect = 2e-11
Identities = 47/92 (51%), Positives = 55/92 (59%), Gaps = 17/92 (18%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSP---------NYSPTSPSYSPTSPSYSPSSPTYSP----SS 468
YSP++ +P SP YSPTSP +SPTSP+YSPTSP YSP+SP +SP S
Sbjct: 1665 YSPASPAYTPTSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTSPQYSPASPAFSPTSPQYS 1724
Query: 467 PYSSGASPDYSP-SAGYSPTLP--GYSPSSTG 381
P ASP YSP S YSPT P G +S G
Sbjct: 1725 P----ASPQYSPTSPQYSPTSPAMGMGGASAG 1752
[187][TOP]
>UniRef100_B2W4S0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2W4S0_PYRTR
Length = 1742
Score = 88.6 bits (218), Expect = 4e-16
Identities = 55/96 (57%), Positives = 61/96 (63%), Gaps = 12/96 (12%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSY-SPTSPSYSPSSPT-YSPSSPYSSGAS 447
SP A SP A SP SPTSP+YSPTSP Y SPTSPSYSP+SP YSP+SP S S
Sbjct: 1588 SPGTA-SPRFAATSPGYMASPTSPHYSPTSPRYGSPTSPSYSPTSPAGYSPTSPQYSPTS 1646
Query: 446 PDYSP----------SAGYSPTLPGYSPSSTGQYTP 369
P+YSP S YSPT P YSP+S QY+P
Sbjct: 1647 PNYSPTSPTFMGGATSPAYSPTSPQYSPTSP-QYSP 1681
Score = 87.8 bits (216), Expect = 7e-16
Identities = 53/98 (54%), Positives = 62/98 (63%), Gaps = 16/98 (16%)
Frame = -1
Query: 614 SIAYSPSN-ARLSPASP-YSPTSPNYSP---------TSPSYSPTSPSYSPSSPTYSPSS 468
S +YSP++ A SP SP YSPTSPNYSP TSP+YSPTSP YSP+SP YSP+S
Sbjct: 1624 SPSYSPTSPAGYSPTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQYSPTSPQYSPTS 1683
Query: 467 PYSSGASPDYSP----SAGYSPTLPGYSPSS-TGQYTP 369
P S SP S YSPT P YSP+S G ++P
Sbjct: 1684 PQYQATSDRRSPTSPTSPQYSPTSPRYSPTSPAGSFSP 1721
Score = 87.4 bits (215), Expect = 9e-16
Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 24/103 (23%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPN---------YSPTSPSYSPTSPSYSPSSPTY-------- 480
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP Y
Sbjct: 1635 YSPTSPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQYSPTSPQYSPTSPQYQATSDRRS 1694
Query: 479 --SPSSPYSSGASPDYSPSA---GYSPTLPGYSPSSTG-QYTP 369
SP+SP S SP YSP++ +SPT P YSP+S G Y+P
Sbjct: 1695 PTSPTSPQYSPTSPRYSPTSPAGSFSPTSPRYSPTSPGPAYSP 1737
Score = 77.4 bits (189), Expect = 9e-13
Identities = 48/97 (49%), Positives = 56/97 (57%), Gaps = 19/97 (19%)
Frame = -1
Query: 602 SPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPS--------------YSPSSPTYSPS 471
SP + + SP SP SP +SPTSP YSPTSP SP+SP YSP+
Sbjct: 1556 SPGGSGFTGMSPGFTSPVSPGFSPTSPGYSPTSPGTASPRFAATSPGYMASPTSPHYSPT 1615
Query: 470 SP-YSSGASPDYSPS--AGYSPTLPGYSPSSTGQYTP 369
SP Y S SP YSP+ AGYSPT P YSP+S Y+P
Sbjct: 1616 SPRYGSPTSPSYSPTSPAGYSPTSPQYSPTSP-NYSP 1651
Score = 62.8 bits (151), Expect = 2e-08
Identities = 41/83 (49%), Positives = 49/83 (59%), Gaps = 20/83 (24%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNY-----------------SPTSPSYSPTSP--SYSP 495
S AYSP++ + SP SP YSPTSP Y SPTSP YSPTSP S+SP
Sbjct: 1662 SPAYSPTSPQYSPTSPQYSPTSPQYQATSDRRSPTSPTSPQYSPTSPRYSPTSPAGSFSP 1721
Query: 494 SSPTYSPSSPYSSGASPDYSPSA 426
+SP YSP+SP P YSP++
Sbjct: 1722 TSPRYSPTSP-----GPAYSPTS 1739
[188][TOP]
>UniRef100_B2AA31 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2AA31_PODAN
Length = 1748
Score = 87.8 bits (216), Expect = 7e-16
Identities = 52/118 (44%), Positives = 65/118 (55%), Gaps = 31/118 (26%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYS 477
S +YSP++ SPASP SPTSP+YSPTSPSYSP SP++ +SP+YS
Sbjct: 1631 SPSYSPTSPSYSPASPAATRHYSPTSPAQFQSPTSPSYSPTSPSYSPASPAFQATSPSYS 1690
Query: 476 PSSPYSSGASPD-YSP----------------SAGYSPTLPGYSPSSTGQYTPHEGDK 354
P+SP S SPD YSP S GYSPT P +SP + G+ GD+
Sbjct: 1691 PASPNWSPTSPDAYSPTSPTFQRSPGQQMSPTSPGYSPTSPSFSPRTPGRAAGSGGDQ 1748
Score = 81.6 bits (200), Expect = 5e-14
Identities = 54/121 (44%), Positives = 65/121 (53%), Gaps = 37/121 (30%)
Frame = -1
Query: 620 SPSIAYSP------------SNARLSPASP-YSPTSPNY---SPTSPSYSPTSPSYSPSS 489
SP+ YSP S+ + SP+SP +SPTSP SPTSPSYSPTSPSYSP+S
Sbjct: 1586 SPAAGYSPTSPLIDAGGRFASSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPAS 1645
Query: 488 PT----YSPSSP--YSSGASPDYSP---------------SAGYSPTLPGYSPSSTGQYT 372
P YSP+SP + S SP YSP S YSP P +SP+S Y+
Sbjct: 1646 PAATRHYSPTSPAQFQSPTSPSYSPTSPSYSPASPAFQATSPSYSPASPNWSPTSPDAYS 1705
Query: 371 P 369
P
Sbjct: 1706 P 1706
Score = 74.3 bits (181), Expect = 7e-12
Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 22/106 (20%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPT------------SPNYSPTSPSY----------SPTSP 507
SP+ +S + SPA+ YSPT SP +SP+SPS+ SPTSP
Sbjct: 1573 SPTSPFSYGYSPTSPAAGYSPTSPLIDAGGRFASSPQFSPSSPSFSPTSPMLRPGSPTSP 1632
Query: 506 SYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
SYSP+SP+YSP+SP ++ SP+ SPT P YSP+S Y+P
Sbjct: 1633 SYSPTSPSYSPASPAATRHYSPTSPAQFQSPTSPSYSPTSP-SYSP 1677
[189][TOP]
>UniRef100_A5DCV1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DCV1_PICGU
Length = 224
Score = 87.4 bits (215), Expect = 9e-16
Identities = 46/76 (60%), Positives = 53/76 (69%), Gaps = 4/76 (5%)
Frame = -1
Query: 584 LSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGY----S 417
LSP+ YSPTSP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSP+
Sbjct: 131 LSPS--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPNVAQLLTNF 188
Query: 416 PTLPGYSPSSTGQYTP 369
PT+ Y PS TP
Sbjct: 189 PTVLTYFPSLLTHVTP 204
Score = 79.3 bits (194), Expect = 2e-13
Identities = 40/63 (63%), Positives = 46/63 (73%), Gaps = 3/63 (4%)
Frame = -1
Query: 569 PYSPT---SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGY 399
P+ PT SP+YSPTSPSYSPTSPSYSP+SP+YSP+SP S SP YSPT P Y
Sbjct: 124 PHHPTHLLSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP------SYSPTSPSY 177
Query: 398 SPS 390
SP+
Sbjct: 178 SPN 180
[190][TOP]
>UniRef100_UPI000023F34A hypothetical protein FG00916.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023F34A
Length = 1758
Score = 87.0 bits (214), Expect = 1e-15
Identities = 50/99 (50%), Positives = 60/99 (60%), Gaps = 17/99 (17%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP----YSPTSPNYSPTSPSY-------------SPTSPSYSPSSP 486
S ++SP++ L P SP YSPTSP+YSPTSPS SPTSPSYSP+SP
Sbjct: 1613 SPSFSPTSPMLRPTSPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSPTSPSYSPASP 1672
Query: 485 TYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
YSP+SP GA SPS YSP P +SP+S Y+P
Sbjct: 1673 NYSPTSPNVHGAGGPTSPS--YSPASPSWSPTSPEAYSP 1709
Score = 79.7 bits (195), Expect = 2e-13
Identities = 46/96 (47%), Positives = 60/96 (62%), Gaps = 12/96 (12%)
Frame = -1
Query: 620 SPSIAYSPSN--------ARLSPASP-YSPTSPNYSPTSPSYSPTSP---SYSPSSPTYS 477
SP++ YSP++ R P SP +SP+SP++SPTSP PTSP SYSP+SP+YS
Sbjct: 1582 SPNMGYSPTSPLIDGGGMGRYGPTSPSFSPSSPSFSPTSPMLRPTSPASPSYSPTSPSYS 1641
Query: 476 PSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
P+SP S SP+ SPT P YSP+S Y+P
Sbjct: 1642 PTSPSSPRHYSPTSPAQFNSPTSPSYSPASP-NYSP 1676
Score = 79.7 bits (195), Expect = 2e-13
Identities = 51/108 (47%), Positives = 64/108 (59%), Gaps = 12/108 (11%)
Frame = -1
Query: 605 YSPSNARL--SPASP-YSPTSPNYSPTSPSY----SPTSPSYSPSSPTYSPSSPYS-SGA 450
YSP++ SP SP YSP SPNYSPTSP+ PTSPSYSP+SP++SP+SP + S
Sbjct: 1651 YSPTSPAQFNSPTSPSYSPASPNYSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAYSPT 1710
Query: 449 SPDY--SPSAGYSPTLPGYSPSST--GQYTPHEGDKKDKTGKKDASKD 318
SP + SP+ SPT P YSP+S TP G ++ S D
Sbjct: 1711 SPTFQRSPTTQQSPTSPSYSPTSPAFSPRTPGPGTSGNQYSPNSPSND 1758
Score = 54.7 bits (130), Expect = 6e-06
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Frame = -1
Query: 608 AYSPSNARL--SPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
AYSP++ SP + SPTSP+YSPTSP++SP +P S YSP+SP
Sbjct: 1706 AYSPTSPTFQRSPTTQQSPTSPSYSPTSPAFSPRTPGPGTSGNQYSPNSP 1755
[191][TOP]
>UniRef100_C6F0A4 RNA polymerase II (Fragment) n=2 Tax=Plasmodium (Laverania)
RepID=C6F0A4_PLAFA
Length = 202
Score = 87.0 bits (214), Expect = 1e-15
Identities = 46/82 (56%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+ + S SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP
Sbjct: 33 YNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 92
Query: 431 SAGYSPTLPGYSPSSTGQYTPH 366
S YSPT P ++ Y+P+
Sbjct: 93 SPKYSPTSPVAQNIASPNYSPY 114
Score = 86.7 bits (213), Expect = 1e-15
Identities = 50/95 (52%), Positives = 58/95 (61%), Gaps = 13/95 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 471
S Y+ +NA SP SP Y+ SP YS TSP YSPTSP YSP+SP YSP+
Sbjct: 5 SPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPT 64
Query: 470 SPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP S SP YSP S YSPT P YSP+S +Y+P
Sbjct: 65 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSP-KYSP 98
Score = 74.7 bits (182), Expect = 6e-12
Identities = 48/122 (39%), Positives = 60/122 (49%), Gaps = 22/122 (18%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT------------------ 483
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP
Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPK 120
Query: 482 YSPSSPYSSGASPDYSPSA---GYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDK 312
+SP+SP S +SP Y S + P P Y S Q + D + + A D+
Sbjct: 121 FSPTSPAYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQDANMFSPIQQAHVDEA 180
Query: 311 GN 306
N
Sbjct: 181 KN 182
[192][TOP]
>UniRef100_P14248 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Plasmodium
falciparum CDC/Honduras RepID=RPB1_PLAFD
Length = 2452
Score = 87.0 bits (214), Expect = 1e-15
Identities = 46/82 (56%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y+ + S SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP
Sbjct: 2283 YNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2342
Query: 431 SAGYSPTLPGYSPSSTGQYTPH 366
S YSPT P ++ Y+P+
Sbjct: 2343 SPKYSPTSPVAQNIASPNYSPY 2364
Score = 86.7 bits (213), Expect = 1e-15
Identities = 50/95 (52%), Positives = 58/95 (61%), Gaps = 13/95 (13%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 471
S Y+ +NA SP SP Y+ SP YS TSP YSPTSP YSP+SP YSP+
Sbjct: 2255 SPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPT 2314
Query: 470 SPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
SP S SP YSP S YSPT P YSP+S +Y+P
Sbjct: 2315 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSP-KYSP 2348
Score = 74.3 bits (181), Expect = 7e-12
Identities = 48/122 (39%), Positives = 60/122 (49%), Gaps = 22/122 (18%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT------------------ 483
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP
Sbjct: 2311 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPK 2370
Query: 482 YSPSSPYSSGASPDYSPSA---GYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDK 312
+SP+SP S +SP Y S + P P Y S Q + D + + A D+
Sbjct: 2371 FSPTSPAYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQDVNMFSPIQQAHVDEA 2430
Query: 311 GN 306
N
Sbjct: 2431 KN 2432
Score = 57.8 bits (138), Expect = 7e-07
Identities = 49/125 (39%), Positives = 63/125 (50%), Gaps = 19/125 (15%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS------ 459
SP+I YSP N L SP N++ SPSYSPTSP+Y+ ++ YSP+SP +
Sbjct: 2223 SPNI-YSP-NPMLDIFSPKPQI--NHNIYSPSYSPTSPTYNANNAYYSPTSPKNQNDQMN 2278
Query: 458 ------------SGASPDYSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKD 318
S SP YSP S YSPT P YSP+S +Y+P K T K +
Sbjct: 2279 VNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSP-KYSP-TSPKYSPTSPKYSPTS 2336
Query: 317 DKGNP 303
K +P
Sbjct: 2337 PKYSP 2341
[193][TOP]
>UniRef100_Q8MX30 DNA-directed RNA polymerase (Fragment) n=1 Tax=Naegleria gruberi
RepID=Q8MX30_NAEGR
Length = 1590
Score = 86.7 bits (213), Expect = 1e-15
Identities = 48/78 (61%), Positives = 56/78 (71%), Gaps = 6/78 (7%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPN----YSPTSP-SYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
SP N+ SP + SPTSP YSP+SP +YSPTSP+YSPSSP YSP+SP S SP+Y
Sbjct: 1510 SPYNSAFSPVAS-SPTSPGHQGGYSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNY 1568
Query: 437 SP-SAGYSPTLPGYSPSS 387
SP S YSPT P YSP+S
Sbjct: 1569 SPTSPAYSPTSPNYSPTS 1586
Score = 81.6 bits (200), Expect = 5e-14
Identities = 41/64 (64%), Positives = 48/64 (75%), Gaps = 2/64 (3%)
Frame = -1
Query: 581 SPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTL 408
SP+SP YSPTSP YSP+SP+YSPTSP+YSP+SP YSP+SP S SP+ YSPT
Sbjct: 1533 SPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSPN------YSPTS 1586
Query: 407 PGYS 396
P YS
Sbjct: 1587 PAYS 1590
Score = 76.6 bits (187), Expect = 2e-12
Identities = 36/47 (76%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYS 477
S AYSPS+ SP SP YSPTSPNYSPTSP+YSPTSP+YSP+SP YS
Sbjct: 1544 SPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSPNYSPTSPAYS 1590
[194][TOP]
>UniRef100_C6F0A3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0A3_PLAFA
Length = 195
Score = 85.5 bits (210), Expect = 3e-15
Identities = 48/89 (53%), Positives = 54/89 (60%), Gaps = 13/89 (14%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 471
S Y+ +NA SP SP Y+ SP YS TSP YSPTSP YSP+SP YSP+
Sbjct: 5 SPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPT 64
Query: 470 SPYSSGASPDYSP-SAGYSPTLPGYSPSS 387
SP S SP YSP S YSPT P YSP+S
Sbjct: 65 SPKYSPTSPKYSPTSPKYSPTSPKYSPTS 93
Score = 83.2 bits (204), Expect = 2e-14
Identities = 43/76 (56%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
Y+ + S SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+
Sbjct: 33 YNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 92
Query: 428 AGYSPTL--PGYSPSS 387
+ + + P YSP S
Sbjct: 93 SPVAQNIASPNYSPYS 108
Score = 74.7 bits (182), Expect = 6e-12
Identities = 48/122 (39%), Positives = 60/122 (49%), Gaps = 22/122 (18%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT------------------ 483
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP
Sbjct: 54 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPK 113
Query: 482 YSPSSPYSSGASPDYSPSA---GYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDK 312
+SP+SP S +SP Y S + P P Y S Q + D + + A D+
Sbjct: 114 FSPTSPAYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQDANMFSPIQQAHVDEA 173
Query: 311 GN 306
N
Sbjct: 174 KN 175
[195][TOP]
>UniRef100_Q2HDK0 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2HDK0_CHAGB
Length = 1756
Score = 85.5 bits (210), Expect = 3e-15
Identities = 48/97 (49%), Positives = 60/97 (61%), Gaps = 18/97 (18%)
Frame = -1
Query: 605 YSPSNARLSPASPY----SPTSPNYSPTSPSYSPTSPS-------------YSPSSPTYS 477
+SPS+ SP SP SPTSPNYSPTSPSYSP SP+ SP+SP+YS
Sbjct: 1608 FSPSSPSFSPTSPMLRPGSPTSPNYSPTSPSYSPASPAATRHYSPTSPQQFNSPTSPSYS 1667
Query: 476 PSSPYSSGASPD-YSPSAGYSPTLPGYSPSSTGQYTP 369
P+SP S ASP+ ++ S YSP P +SP+S Y+P
Sbjct: 1668 PTSPSYSPASPNLHATSPSYSPASPTWSPTSPDAYSP 1704
Score = 85.1 bits (209), Expect = 4e-15
Identities = 54/116 (46%), Positives = 66/116 (56%), Gaps = 24/116 (20%)
Frame = -1
Query: 605 YSPSNARLSPASPY--------------SPTSPNYSPTSPSYSP-------TSPSYSPSS 489
YSP++ SPASP SPTSP+YSPTSPSYSP TSPSYSP+S
Sbjct: 1632 YSPTSPSYSPASPAATRHYSPTSPQQFNSPTSPSYSPTSPSYSPASPNLHATSPSYSPAS 1691
Query: 488 PTYSPSSPYS-SGASPDY--SPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKD 330
PT+SP+SP + S SP + SP SPT PGYSP+S ++P + G D
Sbjct: 1692 PTWSPTSPDAYSPTSPSFHRSPGQQMSPTSPGYSPTSP-SFSPRTPGRGPSGGSGD 1746
Score = 73.9 bits (180), Expect = 1e-11
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSY---SPTSPSYSPSSPTYSPSSPYSSGA 450
SP+ + R + + +SP+SP++SPTSP SPTSP+YSP+SP+YSP+SP ++
Sbjct: 1590 SPTSPLLDAGGRYASSPQFSPSSPSFSPTSPMLRPGSPTSPNYSPTSPSYSPASPAATRH 1649
Query: 449 SPDYSPSAGYSPTLPGYSPSSTGQYTP 369
SP SPT P YSP+S Y+P
Sbjct: 1650 YSPTSPQQFNSPTSPSYSPTSP-SYSP 1675
Score = 73.2 bits (178), Expect = 2e-11
Identities = 45/91 (49%), Positives = 54/91 (59%), Gaps = 21/91 (23%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNYSPTSP-SYSPTSPSY--------SPSSP 486
S +YSP++ SPASP YSP SP +SPTSP +YSPTSPS+ SP+SP
Sbjct: 1663 SPSYSPTSPSYSPASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSFHRSPGQQMSPTSP 1722
Query: 485 TYSPSSPYSSGASPDYSPSAG----YSPTLP 405
YSP+SP S +P PS G YSPT P
Sbjct: 1723 GYSPTSPSFSPRTPGRGPSGGSGDQYSPTSP 1753
Score = 62.8 bits (151), Expect = 2e-08
Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 10/78 (12%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNY--------SPTSPSYSPTSPSYSPSSPTYSPSSP 465
S +YSP++ SP SP YSPTSP++ SPTSP YSPTSPS+SP +P P
Sbjct: 1684 SPSYSPASPTWSPTSPDAYSPTSPSFHRSPGQQMSPTSPGYSPTSPSFSPRTPGRGP--- 1740
Query: 464 YSSGASPDYSPSAGYSPT 411
S G+ YSP+ SPT
Sbjct: 1741 -SGGSGDQYSPT---SPT 1754
[196][TOP]
>UniRef100_C9SR21 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SR21_9PEZI
Length = 1756
Score = 85.5 bits (210), Expect = 3e-15
Identities = 49/87 (56%), Positives = 57/87 (65%), Gaps = 14/87 (16%)
Frame = -1
Query: 605 YSPSNARLSPASPY----SPTSPNYSPTSPSYSPTSPS----YSPSSPTY--SPSSPYSS 456
+SPS+ SP SP SP SPNYSPTSPSYSPTSP+ YSP+SP SP+SP S
Sbjct: 1607 FSPSSPSFSPTSPVHRPTSPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTSPSYS 1666
Query: 455 GASPDYSPSA----GYSPTLPGYSPSS 387
ASP YSP++ G PT P YSP+S
Sbjct: 1667 PASPSYSPTSPNLHGAGPTSPSYSPAS 1693
Score = 82.8 bits (203), Expect = 2e-14
Identities = 55/105 (52%), Positives = 64/105 (60%), Gaps = 21/105 (20%)
Frame = -1
Query: 620 SPSIA-YSPSNARLSPASP-YSPTSPNYSPTSPSY-------------SPTSPSYSPSSP 486
SPS + SP + SPASP YSPTSP+YSPTSP+ SPTSPSYSP+SP
Sbjct: 1611 SPSFSPTSPVHRPTSPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQFNSPTSPSYSPASP 1670
Query: 485 TYSPSSPYSSGA---SPDYSP-SAGYSPTLP--GYSPSSTGQYTP 369
+YSP+SP GA SP YSP S +SPT P YSP+S P
Sbjct: 1671 SYSPTSPNLHGAGPTSPSYSPASPSWSPTSPEHSYSPTSPSFQRP 1715
Score = 80.5 bits (197), Expect = 1e-13
Identities = 47/87 (54%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNY---SPTSPSYSPTSPSYSPSSP--TYSPSSPYS 459
SP+ SP++ SPASP YSPTSPN PTSPSYSP SPS+SP+SP +YSP+SP
Sbjct: 1653 SPAQFNSPTSPSYSPASPSYSPTSPNLHGAGPTSPSYSPASPSWSPTSPEHSYSPTSPSF 1712
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSSTG 381
+ SP S YSPT P +SP + G
Sbjct: 1713 QRPAMQQSPTSPNYSPTSPSFSPRTPG 1739
Score = 70.1 bits (170), Expect = 1e-10
Identities = 50/106 (47%), Positives = 59/106 (55%), Gaps = 24/106 (22%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP---------YSPTSPN--YSPTSPSYS-----PTSPSYSPSS 489
SP A + S SP SP YSPTSP YSPTSP TSP +SPSS
Sbjct: 1552 SPGRAGATSPFTTSPTSPFSSFAGAGGYSPTSPGGGYSPTSPLMDGGARYATSPQFSPSS 1611
Query: 488 PTYSPSSPY---SSGASPDYSP-SAGYSPTLP----GYSPSSTGQY 375
P++SP+SP +S ASP+YSP S YSPT P YSP+S Q+
Sbjct: 1612 PSFSPTSPVHRPTSPASPNYSPTSPSYSPTSPTSPRHYSPTSPAQF 1657
Score = 63.5 bits (153), Expect = 1e-08
Identities = 40/89 (44%), Positives = 50/89 (56%), Gaps = 20/89 (22%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-----------YSPTSPNYSPTSP--SYSPTSPSY-------SP 495
S +YSP++ SP SP YSP SP++SPTSP SYSPTSPS+ SP
Sbjct: 1662 SPSYSPASPSYSPTSPNLHGAGPTSPSYSPASPSWSPTSPEHSYSPTSPSFQRPAMQQSP 1721
Query: 494 SSPTYSPSSPYSSGASPDYSPSAGYSPTL 408
+SP YSP+SP S +P PS P +
Sbjct: 1722 TSPNYSPTSPSFSPRTP--GPSGSGKPVV 1748
[197][TOP]
>UniRef100_UPI000151A8B4 hypothetical protein PGUG_01106 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B4
Length = 224
Score = 85.1 bits (209), Expect = 4e-15
Identities = 45/76 (59%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Frame = -1
Query: 584 LSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGY----S 417
LSP+ YSPTSP+YSPTSPSYSPTSP YSP+SP+YSP+SP S SP YSP+
Sbjct: 131 LSPS--YSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPNVAQLLTNF 188
Query: 416 PTLPGYSPSSTGQYTP 369
PT+ Y PS TP
Sbjct: 189 PTVLTYFPSLLTHVTP 204
Score = 78.6 bits (192), Expect = 4e-13
Identities = 40/63 (63%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Frame = -1
Query: 569 PYSPT---SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGY 399
P+ PT SP+YSPTSPSYSPTSPSYSP+SP YSP+SP S SP YSPT P Y
Sbjct: 124 PHHPTHLLSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSP------SYSPTSPSY 177
Query: 398 SPS 390
SP+
Sbjct: 178 SPN 180
[198][TOP]
>UniRef100_C7YI77 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YI77_NECH7
Length = 1750
Score = 84.0 bits (206), Expect = 9e-15
Identities = 50/99 (50%), Positives = 57/99 (57%), Gaps = 26/99 (26%)
Frame = -1
Query: 605 YSPSNARLSPASPYSP--------------TSPNYSPTSPSYSP----------TSPSYS 498
YSPS+ SPASP SP TSPNYSP SP+YSP TSPSYS
Sbjct: 1627 YSPSSPNYSPASPSSPRHYSPTSPAQFNSPTSPNYSPASPNYSPASPNLHAGGTTSPSYS 1686
Query: 497 PSSPTYSPSSP--YSSGASPDYSPSAGYSPTLPGYSPSS 387
P+SPT+SP+SP YS + SP A SPT P YSP+S
Sbjct: 1687 PASPTWSPTSPEAYSPTSPYQRSPGAQQSPTSPSYSPTS 1725
Score = 83.2 bits (204), Expect = 2e-14
Identities = 50/103 (48%), Positives = 61/103 (59%), Gaps = 21/103 (20%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPY----SPTSPNYSPTSPSYSPTSPS----YSPSSPTY--SPSSP 465
S ++SPS+ SP SP SP SPNYSP+SP+YSP SPS YSP+SP SP+SP
Sbjct: 1600 SPSFSPSSPSFSPTSPMVRPTSPASPNYSPSSPNYSPASPSSPRHYSPTSPAQFNSPTSP 1659
Query: 464 YSSGASPDYSP-----------SAGYSPTLPGYSPSSTGQYTP 369
S ASP+YSP S YSP P +SP+S Y+P
Sbjct: 1660 NYSPASPNYSPASPNLHAGGTTSPSYSPASPTWSPTSPEAYSP 1702
Score = 81.3 bits (199), Expect = 6e-14
Identities = 49/97 (50%), Positives = 59/97 (60%), Gaps = 12/97 (12%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNY---SPTSPSYSPTSPSYSPSSP-TYSPSSPYSS 456
SP+ SP++ SPASP YSP SPN TSPSYSP SP++SP+SP YSP+SPY
Sbjct: 1649 SPAQFNSPTSPNYSPASPNYSPASPNLHAGGTTSPSYSPASPTWSPTSPEAYSPTSPYQR 1708
Query: 455 GASPDYSP-SAGYSPTLPGYSP------SSTGQYTPH 366
SP S YSPT P +SP SS QY+P+
Sbjct: 1709 SPGAQQSPTSPSYSPTSPAFSPRTPGPGSSGNQYSPN 1745
Score = 73.2 bits (178), Expect = 2e-11
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 11/91 (12%)
Frame = -1
Query: 608 AYSPSN--------ARLSPASPYSPTSPNYSPTSPSYSPTSPS---YSPSSPTYSPSSPY 462
AYSP++ R + + +SP+SP++SPTSP PTSP+ YSPSSP YSP+SP
Sbjct: 1581 AYSPTSPLVDGGMGGRYATSPSFSPSSPSFSPTSPMVRPTSPASPNYSPSSPNYSPASPS 1640
Query: 461 SSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
S SP+ SPT P YSP+S Y+P
Sbjct: 1641 SPRHYSPTSPAQFNSPTSPNYSPASP-NYSP 1670
Score = 67.4 bits (163), Expect = 9e-10
Identities = 44/92 (47%), Positives = 55/92 (59%), Gaps = 23/92 (25%)
Frame = -1
Query: 581 SPASPYSPTSPNYSPTSPS-YSP--------------TSPSYSPSSPTYSPSSPY---SS 456
SP SP+ P YSPTSP+ YSP TSPS+SPSSP++SP+SP +S
Sbjct: 1563 SPTSPFGPGG-GYSPTSPNAYSPTSPLVDGGMGGRYATSPSFSPSSPSFSPTSPMVRPTS 1621
Query: 455 GASPDYSPSA-GYSPTLPG----YSPSSTGQY 375
ASP+YSPS+ YSP P YSP+S Q+
Sbjct: 1622 PASPNYSPSSPNYSPASPSSPRHYSPTSPAQF 1653
Score = 62.4 bits (150), Expect = 3e-08
Identities = 35/86 (40%), Positives = 44/86 (51%), Gaps = 26/86 (30%)
Frame = -1
Query: 605 YSPSNARLSPASP-----------YSPTSPNYSPTSPS---------------YSPTSPS 504
YSP++ SPASP YSP SP +SPTSP SPTSPS
Sbjct: 1661 YSPASPNYSPASPNLHAGGTTSPSYSPASPTWSPTSPEAYSPTSPYQRSPGAQQSPTSPS 1720
Query: 503 YSPSSPTYSPSSPYSSGASPDYSPSA 426
YSP+SP +SP +P + YSP++
Sbjct: 1721 YSPTSPAFSPRTPGPGSSGNQYSPNS 1746
Score = 58.5 bits (140), Expect = 4e-07
Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 16/66 (24%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSP-------NYSPTSPSYSPTSPSYSPSSP-------T 483
S +YSP++ SP SP YSPTSP SPTSPSYSPTSP++SP +P
Sbjct: 1682 SPSYSPASPTWSPTSPEAYSPTSPYQRSPGAQQSPTSPSYSPTSPAFSPRTPGPGSSGNQ 1741
Query: 482 YSPSSP 465
YSP+SP
Sbjct: 1742 YSPNSP 1747
[199][TOP]
>UniRef100_B8M2Y2 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500
RepID=B8M2Y2_TALSN
Length = 1755
Score = 83.2 bits (204), Expect = 2e-14
Identities = 44/93 (47%), Positives = 61/93 (65%), Gaps = 15/93 (16%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSP-------SSPTYSPSSPY 462
SPS +YSP++ +S SP TSP +SP+SP++ TSP+YSP +SP+YSP+SP
Sbjct: 1581 SPSSSYSPASPGMSITSPRFVTSPGFSPSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPR 1640
Query: 461 SSGASPDYSPSA--------GYSPTLPGYSPSS 387
S +SP+YSPS+ +SPT P YSP+S
Sbjct: 1641 FSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTS 1673
Score = 79.0 bits (193), Expect = 3e-13
Identities = 48/105 (45%), Positives = 57/105 (54%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNY-------SPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
S +SPS+ SP YSPTSP+Y SPTSP +SP+SP+YSPSSP S SSP
Sbjct: 1603 SPGFSPSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAF 1662
Query: 458 SGASPDYSP---------------SAGYSPTLPGYSPSSTGQYTP 369
S SP YSP S YSP P +SP+S Y+P
Sbjct: 1663 SPTSPTYSPTSPAIGGTRQFSSPTSPKYSPASPAWSPTSPEIYSP 1707
Score = 76.3 bits (186), Expect = 2e-12
Identities = 51/108 (47%), Positives = 64/108 (59%), Gaps = 26/108 (24%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPN-------YSPTSPSYSPTSPSY-------SPSSPTY 480
S +YSP++ R SP+SP YSP+SPN +SPTSP+YSPTSP+ SP+SP Y
Sbjct: 1631 SPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFSSPTSPKY 1690
Query: 479 SPSSPYSSGASPDY----SPSAGYSP-------TLPGYSPSSTGQYTP 369
SP+SP S SP+ SP+ SP T P YSP+S QY P
Sbjct: 1691 SPASPAWSPTSPEIYSPTSPNIHGSPTSPARGGTSPSYSPTSP-QYNP 1737
Score = 68.9 bits (167), Expect = 3e-10
Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 19/91 (20%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPS--------------YSPTSPSYSPSSP-TYSP 474
YSPS+ +S +SP +SPTSP YSPTSP+ YSP SP++SP+SP YSP
Sbjct: 1648 YSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFSSPTSPKYSPASPAWSPTSPEIYSP 1707
Query: 473 SSP--YSSGASPDY-SPSAGYSPTLPGYSPS 390
+SP + S SP S YSPT P Y+P+
Sbjct: 1708 TSPNIHGSPTSPARGGTSPSYSPTSPQYNPT 1738
Score = 60.5 bits (145), Expect = 1e-07
Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 4/54 (7%)
Frame = -1
Query: 605 YSPSNARLSPASP--YSPTSPNY--SPTSPSYSPTSPSYSPSSPTYSPSSPYSS 456
YSP++ SP SP YSPTSPN SPTSP+ TSPSYSP+SP Y+P+ Y++
Sbjct: 1690 YSPASPAWSPTSPEIYSPTSPNIHGSPTSPARGGTSPSYSPTSPQYNPTYVYTN 1743
Score = 57.8 bits (138), Expect = 7e-07
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Frame = -1
Query: 602 SPSNARLSPASP-YSPTSPN-YSPTSPSY--SPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
SP++ + SPASP +SPTSP YSPTSP+ SPTSP+ +SP+YSP+ SP Y+
Sbjct: 1684 SPTSPKYSPASPAWSPTSPEIYSPTSPNIHGSPTSPARGGTSPSYSPT-------SPQYN 1736
Query: 434 PSAGYSPTLPGYSPS 390
P+ Y T PG P+
Sbjct: 1737 PT--YVYTNPGEVPA 1749
[200][TOP]
>UniRef100_B0DB45 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0DB45_LACBS
Length = 1742
Score = 82.8 bits (203), Expect = 2e-14
Identities = 46/75 (61%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
Y PS AR +P SP YSPTSP + TSP YSPTSP YSP+SP++SP+SP S SP +SP
Sbjct: 1590 YDPS-AR-NPTSPTYSPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPT 1647
Query: 431 SAGYSPTLPGYSPSS 387
S YSPT P +SP+S
Sbjct: 1648 SPRYSPTSPSFSPAS 1662
Score = 82.4 bits (202), Expect = 3e-14
Identities = 39/64 (60%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ L+ SP YSPTSP YSPTSPS+SPTSP YSP SP++SP+SP S SP +
Sbjct: 1599 SPTYSPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSF 1658
Query: 437 SPSA 426
SP++
Sbjct: 1659 SPAS 1662
Score = 80.5 bits (197), Expect = 1e-13
Identities = 46/102 (45%), Positives = 58/102 (56%), Gaps = 24/102 (23%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPY-----------------------SPTSPNYSPTSPSYSPTS 510
SP++ YSP++ P SP+ +PTSP YSPTSP+ + TS
Sbjct: 1555 SPNV-YSPTSPSFVPQSPFGGATSPFGTSPYAASPYYDPSARNPTSPTYSPTSPALNLTS 1613
Query: 509 PSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSS 387
P YSP+SP YSP+SP S SP YSP S +SPT P YSP+S
Sbjct: 1614 PGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTS 1655
Score = 76.6 bits (187), Expect = 2e-12
Identities = 37/62 (59%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S YSP++ R SP SP +SPTSP YSP SPS+SPTSP YSP+SP++SP+SP S Y
Sbjct: 1613 SPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPASPRCKFLSIIY 1672
Query: 437 SP 432
P
Sbjct: 1673 EP 1674
Score = 69.7 bits (169), Expect = 2e-10
Identities = 44/97 (45%), Positives = 56/97 (57%), Gaps = 25/97 (25%)
Frame = -1
Query: 584 LSPASP-YSPTSPN-YSPTSPSYSPTSP----------------------SYSPSSPTYS 477
+SP P YSP+SPN YSPTSPS+ P SP + +P+SPTYS
Sbjct: 1544 MSPGGPGYSPSSPNVYSPTSPSFVPQSPFGGATSPFGTSPYAASPYYDPSARNPTSPTYS 1603
Query: 476 PSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P+SP + SP YSP S YSPT P +SP+S +Y+P
Sbjct: 1604 PTSPALNLTSPGYSPTSPRYSPTSPSFSPTSP-RYSP 1639
[201][TOP]
>UniRef100_C6F1F5 RNA polymerase II (Fragment) n=1 Tax=Plasmodium fragile
RepID=C6F1F5_PLAFR
Length = 210
Score = 82.4 bits (202), Expect = 3e-14
Identities = 44/74 (59%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Frame = -1
Query: 581 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 408
S SP YS TSP YSPTSP YSPTSP Y P+SP YSP+SP S SP YSP S YSPT
Sbjct: 50 SVVSPVYSVTSPKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTS 109
Query: 407 PGYSPSSTGQYTPH 366
P + S+ Y+P+
Sbjct: 110 PIPNNPSSPHYSPY 123
Score = 79.0 bits (193), Expect = 3e-13
Identities = 45/85 (52%), Positives = 53/85 (62%), Gaps = 8/85 (9%)
Frame = -1
Query: 617 PSIAYSPSNA--RLSPASP-----YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 459
P YSP++ +L +P +S SP YS TSP YSPTSP YSP+SP Y P+SP
Sbjct: 25 PKSFYSPTSPTNQLGEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPQYMPTSPKY 84
Query: 458 SGASPDYSP-SAGYSPTLPGYSPSS 387
S SP YSP S YSPT P YSP+S
Sbjct: 85 SPTSPKYSPTSPKYSPTSPQYSPTS 109
Score = 65.1 bits (157), Expect = 5e-09
Identities = 45/108 (41%), Positives = 50/108 (46%), Gaps = 42/108 (38%)
Frame = -1
Query: 566 YSPTSPN---------------------YSPTSPS--------------------YSPTS 510
YSPTSP YSPTSP+ YS TS
Sbjct: 1 YSPTSPTYHLSNNANAGGSAGLNDPKSFYSPTSPTNQLGEMNPNMMKYHSVVSPVYSVTS 60
Query: 509 PSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPSSTGQYTP 369
P YSP+SP YSP+SP SP YSP S YSPT P YSP+S QY+P
Sbjct: 61 PKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSP-QYSP 107
Score = 57.0 bits (136), Expect = 1e-06
Identities = 41/119 (34%), Positives = 53/119 (44%), Gaps = 19/119 (15%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSP------------------SYSPTSPSYSPSSPT 483
YSP++ + SP SP YSPTSP YSPTSP +SPTSP+YS SSP
Sbjct: 84 YSPTSPKYSPTSPKYSPTSPQYSPTSPIPNNPSSPHYSPYAIASPKFSPTSPAYSISSPV 143
Query: 482 YSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGN 306
Y S+ + + P P Y S Q H D + + A+ D+ N
Sbjct: 144 YDRSA---------NARNKNQHPLSPAYILQSPVQVKQHIQDVSVFSPIQQANADEAQN 193
[202][TOP]
>UniRef100_C6F0B0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0B0_PLAFA
Length = 188
Score = 82.0 bits (201), Expect = 4e-14
Identities = 46/97 (47%), Positives = 54/97 (55%), Gaps = 21/97 (21%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-------------------YSPTSPNYSPTSPSYSPTSPSYSPS 492
S Y+ +NA SP SP YS TSP YSPTSP YSPTSP YSP+
Sbjct: 5 SPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPT 64
Query: 491 SPTYSPSSPYSSGASPDYSPSAGYSPTL--PGYSPSS 387
SP YSP+SP S SP YSP++ + + P YSP S
Sbjct: 65 SPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYS 101
Score = 74.7 bits (182), Expect = 6e-12
Identities = 48/122 (39%), Positives = 60/122 (49%), Gaps = 22/122 (18%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPT------------------ 483
YSP++ + SP SP YSPTSP YSPTSP YSPTSP YSP+SP
Sbjct: 47 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPK 106
Query: 482 YSPSSPYSSGASPDYSPSA---GYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDK 312
+SP+SP S +SP Y S + P P Y S Q + D + + A D+
Sbjct: 107 FSPTSPAYSISSPVYDKSGVVNAHQPMSPAYILQSPVQIKQNVQDANMFSPIQQAHVDEA 166
Query: 311 GN 306
N
Sbjct: 167 KN 168
Score = 69.7 bits (169), Expect = 2e-10
Identities = 43/86 (50%), Positives = 46/86 (53%), Gaps = 26/86 (30%)
Frame = -1
Query: 566 YSPTSPN-------YSPTSPS------------------YSPTSPSYSPSSPTYSPSSPY 462
YSPTSP YSPTSP YS TSP YSP+SP YSP+SP
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 461 SSGASPDYSP-SAGYSPTLPGYSPSS 387
S SP YSP S YSPT P YSP+S
Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTS 86
[203][TOP]
>UniRef100_B9PMD7 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii
RepID=B9PMD7_TOXGO
Length = 1892
Score = 80.5 bits (197), Expect = 1e-13
Identities = 46/87 (52%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = -1
Query: 620 SPSIAYSPSNA--RLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YSSGA 450
S S +YSP++ + +P SP SP SP YSPTSP YSPTSP YSP+ YSP SP Y +G
Sbjct: 1735 SASTSYSPTSPVQQSNPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQ 1794
Query: 449 SPDYSPSAGYSPTLPGYSPSSTGQYTP 369
P SPS ++ P YSPSS Y+P
Sbjct: 1795 GP-LSPS--FTVQSPRYSPSSPAAYSP 1818
Score = 68.6 bits (166), Expect = 4e-10
Identities = 47/111 (42%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNY----SPTSPSYSPTSPSYSPSSP-TYSP 474
S AYSP++ R SP SP YSP SP+Y P SPS++ SP YSPSSP YSP
Sbjct: 1759 SPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYSPSSPAAYSP 1818
Query: 473 SSPYSSGA-SPDYSPSAG-----YSPTLPGYSPSSTGQYTPHEGDKKDKTG 339
+SP + A SP Y S YSPT P Y + P + D+ G
Sbjct: 1819 TSPMPNVAGSPSYEDSHAPGGDTYSPTSPMYEANDPFSPDPFAAEVVDEVG 1869
Score = 65.1 bits (157), Expect = 5e-09
Identities = 47/112 (41%), Positives = 60/112 (53%), Gaps = 32/112 (28%)
Frame = -1
Query: 608 AYSPSNARLSPASPYSPTSP-NYSPTSPSYSPT-----------------------SPSY 501
+YSP++ LSP+ YSP+SP +YSPTSP+YSPT SPS
Sbjct: 1670 SYSPTSPTLSPS--YSPSSPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSN 1727
Query: 500 SPSSP------TYSPSSP--YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
+P SP +YSP+SP S+ SP S YSPT P YSP+S Y+P
Sbjct: 1728 NPMSPHFSASTSYSPTSPVQQSNPTSPTSPYSPAYSPTSPRYSPTSP-MYSP 1778
Score = 61.2 bits (147), Expect = 7e-08
Identities = 53/118 (44%), Positives = 60/118 (50%), Gaps = 36/118 (30%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPY-----------SPTSPNYSPTSP------SYSPTSP------- 507
S AYSP++A LS ASP SP SP+ +P SP SYSPTSP
Sbjct: 1694 SPAYSPTSA-LSIASPVPGVGGDGRTPLSPFSPSNNPMSPHFSASTSYSPTSPVQQSNPT 1752
Query: 506 -SYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGY-------SPSSTGQ---YTP 369
SP SP YSP+SP S SP YSP+ A YSP P Y SPS T Q Y+P
Sbjct: 1753 SPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYSP 1810
Score = 54.7 bits (130), Expect = 6e-06
Identities = 43/111 (38%), Positives = 52/111 (46%), Gaps = 27/111 (24%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSP----SYSPSSPTYSPSSPYSSG 453
SP+ SP + SP +P SP SP+ P +SPTSP + SSP+YSPSSP S+
Sbjct: 1584 SPTSPLSPLSC-FSPRNPLSPLSPS-GPPGGVFSPTSPILGSALETSSPSYSPSSPQSAY 1641
Query: 452 ASPDYSPSA-------------------GYSPT----LPGYSPSSTGQYTP 369
D S SA YSPT P YSPSS Y+P
Sbjct: 1642 FQNDGSSSAVDMVISPGGVGSDGRGRGGSYSPTSPTLSPSYSPSSPPSYSP 1692
[204][TOP]
>UniRef100_B6KEC6 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
RepID=B6KEC6_TOXGO
Length = 1892
Score = 80.5 bits (197), Expect = 1e-13
Identities = 46/87 (52%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = -1
Query: 620 SPSIAYSPSNA--RLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YSSGA 450
S S +YSP++ + +P SP SP SP YSPTSP YSPTSP YSP+ YSP SP Y +G
Sbjct: 1735 SASTSYSPTSPVQQSNPTSPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQ 1794
Query: 449 SPDYSPSAGYSPTLPGYSPSSTGQYTP 369
P SPS ++ P YSPSS Y+P
Sbjct: 1795 GP-LSPS--FTVQSPRYSPSSPAAYSP 1818
Score = 68.6 bits (166), Expect = 4e-10
Identities = 47/111 (42%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--------YSPTSPNY----SPTSPSYSPTSPSYSPSSP-TYSP 474
S AYSP++ R SP SP YSP SP+Y P SPS++ SP YSPSSP YSP
Sbjct: 1759 SPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYSPSSPAAYSP 1818
Query: 473 SSPYSSGA-SPDYSPSAG-----YSPTLPGYSPSSTGQYTPHEGDKKDKTG 339
+SP + A SP Y S YSPT P Y + P + D+ G
Sbjct: 1819 TSPMPNVAGSPSYEDSHAPGGDTYSPTSPMYEANDPFSPDPFAAEVVDEVG 1869
Score = 63.9 bits (154), Expect = 1e-08
Identities = 46/112 (41%), Positives = 60/112 (53%), Gaps = 32/112 (28%)
Frame = -1
Query: 608 AYSPSNARLSPASPYSPTSP-NYSPTSPSYSPT-----------------------SPSY 501
+YSP++ LSP+ YSP++P +YSPTSP+YSPT SPS
Sbjct: 1670 SYSPTSPTLSPS--YSPSAPPSYSPTSPAYSPTSALSIASPVPGVGGDGRTPLSPFSPSN 1727
Query: 500 SPSSP------TYSPSSP--YSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
+P SP +YSP+SP S+ SP S YSPT P YSP+S Y+P
Sbjct: 1728 NPMSPHFSASTSYSPTSPVQQSNPTSPTSPYSPAYSPTSPRYSPTSP-MYSP 1778
Score = 61.2 bits (147), Expect = 7e-08
Identities = 53/118 (44%), Positives = 60/118 (50%), Gaps = 36/118 (30%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPY-----------SPTSPNYSPTSP------SYSPTSP------- 507
S AYSP++A LS ASP SP SP+ +P SP SYSPTSP
Sbjct: 1694 SPAYSPTSA-LSIASPVPGVGGDGRTPLSPFSPSNNPMSPHFSASTSYSPTSPVQQSNPT 1752
Query: 506 -SYSPSSPTYSPSSPYSSGASPDYSPS-AGYSPTLPGY-------SPSSTGQ---YTP 369
SP SP YSP+SP S SP YSP+ A YSP P Y SPS T Q Y+P
Sbjct: 1753 SPTSPYSPAYSPTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYSP 1810
[205][TOP]
>UniRef100_A7TTU2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Vanderwaltozyma
polyspora DSM 70294 RepID=A7TTU2_VANPO
Length = 1311
Score = 75.1 bits (183), Expect = 4e-12
Identities = 41/76 (53%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Frame = -1
Query: 620 SPSIAY--SPSNARLSPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 453
SP AY SPS+ S +SPTSP YSPTSPSYSPTSPSYSP+S +YS +S S
Sbjct: 1203 SPFTAYGESPSSPGFGGVSSPGFSPTSPAYSPTSPSYSPTSPSYSPTSTSYSQTSSSYSP 1262
Query: 452 ASPDYSPSAGYSPTLP 405
SP YS + ++P +P
Sbjct: 1263 TSPSYSQNLHHTPKIP 1278
[206][TOP]
>UniRef100_A8N128 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130
RepID=A8N128_COPC7
Length = 1642
Score = 73.2 bits (178), Expect = 2e-11
Identities = 55/129 (42%), Positives = 67/129 (51%), Gaps = 34/129 (26%)
Frame = -1
Query: 608 AYSPSNARLSPASPY-------------SP--------TSPNYSP-------TSPSYSPT 513
AYSP++ + P SPY SP TSP YSP TSP+YSPT
Sbjct: 1505 AYSPTSPGMVPRSPYGAPTSPFSNQYATSPFYDSRRQATSPTYSPTSPIAGLTSPAYSPT 1564
Query: 512 SPSYSPSSPT-YSPSSP-YSSGASPDYSP-SAGYS--PTLPGYSPSS-TGQYTPHEGDKK 351
SP +SP+SP YSP SP + S ASP+YSP S YS P P YSPSS T T D+
Sbjct: 1565 SPGFSPTSPNGYSPQSPNFGSPASPNYSPASPSYSPAPASPNYSPSSPTWSPTSPAHDQN 1624
Query: 350 DKTGKKDAS 324
T + ++
Sbjct: 1625 GPTNNRSSA 1633
Score = 70.9 bits (172), Expect = 8e-11
Identities = 44/87 (50%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP--YSPTSPNY-SPTSPSYSPTSPSYSPS--SPTYSPSSPYSSGA 450
S AYSP++ SP SP YSP SPN+ SP SP+YSP SPSYSP+ SP YSPSSP S
Sbjct: 1558 SPAYSPTSPGFSPTSPNGYSPQSPNFGSPASPNYSPASPSYSPAPASPNYSPSSPTWSPT 1617
Query: 449 SPDYSPSAGYSPTLPGYSPSSTGQYTP 369
SP + + P + SS Q +P
Sbjct: 1618 SPAHDQNG------PTNNRSSAYQQSP 1638
Score = 67.8 bits (164), Expect = 7e-10
Identities = 45/98 (45%), Positives = 53/98 (54%), Gaps = 16/98 (16%)
Frame = -1
Query: 614 SIAYSPSNAR-LSPASPYSPTSPN-YSPTSPSYSPTSPSYSPSSP---TYSPSSPYSS-- 456
S SP A +SP YSP+SPN YSPTSP P SP +P+SP Y+ S Y S
Sbjct: 1481 SFPQSPHGAGGMSPGPGYSPSSPNAYSPTSPGMVPRSPYGAPTSPFSNQYATSPFYDSRR 1540
Query: 455 -GASPDYSP--------SAGYSPTLPGYSPSSTGQYTP 369
SP YSP S YSPT PG+SP+S Y+P
Sbjct: 1541 QATSPTYSPTSPIAGLTSPAYSPTSPGFSPTSPNGYSP 1578
Score = 57.8 bits (138), Expect = 7e-07
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Frame = -1
Query: 602 SPSNARLSPASP-YSPT--SPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP++ SPASP YSP SPNYSP+SP++SPTSP++ + PT + SS Y S D
Sbjct: 1585 SPASPNYSPASPSYSPAPASPNYSPSSPTWSPTSPAHDQNGPTNNRSSAYQQSPSWD 1641
[207][TOP]
>UniRef100_Q01K81 H0525C06.3 protein n=2 Tax=Oryza sativa RepID=Q01K81_ORYSA
Length = 350
Score = 72.4 bits (176), Expect = 3e-11
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
+PS +SPS SP YSP++P SP YSP++P +SP Y+PS+P+ ASPD
Sbjct: 162 APSPPWSPSRRAASP--DYSPSTPPRRAASPDYSPSTPPRRAASPDYTPSTPWRRAASPD 219
Query: 440 YSPSAGYSP----TLPGYSPS------STGQYTP 369
Y+PS +SP + P YSPS ++ YTP
Sbjct: 220 YAPSTPWSPPRRASSPDYSPSTPPRRAASPNYTP 253
Score = 60.8 bits (146), Expect = 9e-08
Identities = 38/92 (41%), Positives = 50/92 (54%), Gaps = 19/92 (20%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS---SGASPDY 438
YSPS ASP YSP++P SP Y+P++P +SP Y+PS+P+S +SPDY
Sbjct: 178 YSPSTPPRRAASPDYSPSTPPRRAASPDYTPSTPWRRAASPDYAPSTPWSPPRRASSPDY 237
Query: 437 SPSA--------GYSPTL-------PGYSPSS 387
SPS Y+P+ P YSPSS
Sbjct: 238 SPSTPPRRAASPNYTPSTPPRRAASPDYSPSS 269
Score = 59.3 bits (142), Expect = 2e-07
Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
Y+PS ASP Y+P++P P +SP YSP++P +SP Y+PS+P ASPDY
Sbjct: 206 YTPSTPWRRAASPDYAPSTPWSPPRRASSPDYSPSTPPRRAASPNYTPSTPPRRAASPDY 265
Query: 437 SPSAGYSPTLPGYSPSSTGQYTPHEGDKKD 348
SPS SP SP T P D
Sbjct: 266 SPS---SPPRRAASPEYTQLSPPRRAASPD 292
Score = 57.8 bits (138), Expect = 7e-07
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSPS ASP Y+P++P SP YSP+SP +SP Y+ SP ASPDY+PS
Sbjct: 237 YSPSTPPRRAASPNYTPSTPPRRAASPDYSPSSPPRRAASPEYTQLSPPRRAASPDYNPS 296
Query: 428 AGYSPTLPGYSPSST 384
+P + S T
Sbjct: 297 TPPPSPVPSDAGSRT 311
Score = 55.5 bits (132), Expect = 4e-06
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Frame = -1
Query: 560 PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPT----LPGYSP 393
P P + SP Y+P++P +SP Y+PS+P+ ASPD++PS +SP+ P YSP
Sbjct: 121 PPPPPRTAASPEYTPSTPWRRAASPDYTPSTPWRRAASPDHAPSPPWSPSRRAASPDYSP 180
Query: 392 SS 387
S+
Sbjct: 181 ST 182
[208][TOP]
>UniRef100_A4RMP1 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4RMP1_MAGGR
Length = 1757
Score = 71.2 bits (173), Expect = 6e-11
Identities = 48/101 (47%), Positives = 57/101 (56%), Gaps = 19/101 (18%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP------YSPTSP---NYSPTSPSYSPTSPSYSP---SSPTYSPS 471
S+ YSP++ P SP YSPTSP SPTSP YSP SPS+SP +SP Y
Sbjct: 1630 SMGYSPTSPTYQPGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPSFSPGGATSPMYYVG 1689
Query: 470 SPYSSGASPDYSPSAGYSPTLPGY-------SPSSTGQYTP 369
SP ASP SP+A YSPT P + SP+S G Y+P
Sbjct: 1690 SP--QHASPT-SPNAHYSPTSPSFQRSPAQASPTSPGPYSP 1727
Score = 66.6 bits (161), Expect = 2e-09
Identities = 45/107 (42%), Positives = 55/107 (51%), Gaps = 29/107 (27%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP---YSPTSP-----NYSPTSPSYSPTSPS------------- 504
SP+ +S SP SP YSPTSP Y +SPS+SP+SPS
Sbjct: 1569 SPTSPFSAGYGSYSPTSPMAGYSPTSPMMDGGRYGASSPSFSPSSPSFQPTSPIMRHGAG 1628
Query: 503 ----YSPSSPTYSPSSPYSSGASPDYSPSA----GYSPTLPGYSPSS 387
YSP+SPTY P SP +G YSP++ G SPT P YSP+S
Sbjct: 1629 DSMGYSPTSPTYQPGSP--TGGDNHYSPTSPAQFGASPTSPLYSPAS 1673
Score = 54.7 bits (130), Expect = 6e-06
Identities = 39/85 (45%), Positives = 47/85 (55%), Gaps = 25/85 (29%)
Frame = -1
Query: 605 YSPSNARLSPA----------SPY--SPTSPN--YSPTSPSY-------SPTSPS-YSPS 492
YSP++ SP SP SPTSPN YSPTSPS+ SPTSP YSP+
Sbjct: 1669 YSPASPSFSPGGATSPMYYVGSPQHASPTSPNAHYSPTSPSFQRSPAQASPTSPGPYSPT 1728
Query: 491 SPTYSPSSP---YSSGASPDYSPSA 426
SP++SP SP SG YSP++
Sbjct: 1729 SPSFSPRSPGRNNRSGGQDSYSPTS 1753
[209][TOP]
>UniRef100_A9SW33 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SW33_PHYPA
Length = 284
Score = 70.9 bits (172), Expect = 8e-11
Identities = 45/85 (52%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP A SPS SP PYSP+ SP SP+YSP+ SP SPTYSPS Y S SP
Sbjct: 146 SPPYA-SPSPVYESP--PYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPT 202
Query: 440 YSPSAGY-SPTLPGYSPSSTGQYTP 369
YSPS Y SP P YSPS + P
Sbjct: 203 YSPSPVYKSPPSPTYSPSPVYKSPP 227
Score = 70.9 bits (172), Expect = 8e-11
Identities = 47/101 (46%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPY-SPTSPNYSPTSPSYSPTSPSYSPS-------SPTYSPSSP 465
SPS Y + SP+ Y SP SP YSP+ SP SP+YSPS SPTYSPS
Sbjct: 151 SPSPVYE--SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSPV 208
Query: 464 YSSGASPDYSPSAGY-SPTLPGYSPSSTGQYTPHEGDKKDK 345
Y S SP YSPS Y SP P YSPS +E + D+
Sbjct: 209 YKSPPSPTYSPSPVYKSPPSPSYSPSPQNCLMNNEVSRMDR 249
Score = 59.3 bits (142), Expect = 2e-07
Identities = 40/80 (50%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Frame = -1
Query: 578 PASPYSPT--SPNYSPTSPSYSPTSPSYSPS-------SPTYSPSSPYSSGASPDYSPSA 426
P P SP SP Y+ SP Y SP YSPS SPTYSPS Y S SP YSPS
Sbjct: 136 PPPPESPVYESPPYASPSPVYE--SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPTYSPSP 193
Query: 425 GY-SPTLPGYSPSSTGQYTP 369
Y SP P YSPS + P
Sbjct: 194 VYKSPPSPTYSPSPVYKSPP 213
Score = 55.8 bits (133), Expect = 3e-06
Identities = 35/71 (49%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = -1
Query: 578 PASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGY-SPTLPG 402
P+ P P SP Y SP Y+ SP Y SP YSPS Y S SP YSPS Y SP P
Sbjct: 133 PSCPPPPESPVYE--SPPYASPSPVYE--SPPYSPSPVYKSPPSPTYSPSPVYKSPPSPT 188
Query: 401 YSPSSTGQYTP 369
YSPS + P
Sbjct: 189 YSPSPVYKSPP 199
[210][TOP]
>UniRef100_Q4N0F9 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4N0F9_THEPA
Length = 1681
Score = 69.7 bits (169), Expect = 2e-10
Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPS--YSPSSPTYSPSSPYSSGASPD 441
S YSP+ + SP S SPTSP YSP +YSPTSP+ Y+P+SP YSP+ S SP+
Sbjct: 1597 SPVYSPAYSPTSPTSAMSPTSPVYSP---AYSPTSPNLGYAPTSPVYSPAY---SPTSPN 1650
Query: 440 Y--SPSAGYSPTLPGYSPSSTGQYTPH 366
Y SP++ SPT P YSP T ++P+
Sbjct: 1651 YGYSPTSPLSPTSPAYSP--TDPFSPN 1675
Score = 66.2 bits (160), Expect = 2e-09
Identities = 46/92 (50%), Positives = 56/92 (60%), Gaps = 10/92 (10%)
Frame = -1
Query: 614 SIAYSPSN--ARLSPASPYSPTSPNYSPTSPSYSPTSPS--YSPSSPTYSPS-SPYSSG- 453
S AYSP++ + SPA+ SPTSP YSP +YSPTSP+ SP+SP YSP+ SP S
Sbjct: 1575 SPAYSPTSPMSPTSPANALSPTSPVYSP---AYSPTSPTSAMSPTSPVYSPAYSPTSPNL 1631
Query: 452 ----ASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
SP YSP+ YSPT P Y S T +P
Sbjct: 1632 GYAPTSPVYSPA--YSPTSPNYGYSPTSPLSP 1661
Score = 63.9 bits (154), Expect = 1e-08
Identities = 45/101 (44%), Positives = 57/101 (56%), Gaps = 24/101 (23%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPN--YSPT-SPSYSPTSP--------SYSPSSPTYSP 474
SP+ SP++ +SP SP SP SP SP SP+YSPTSP + SP+SP YSP
Sbjct: 1544 SPTSPMSPTSP-MSPTSPMSPMSPTSAMSPVYSPAYSPTSPMSPTSPANALSPTSPVYSP 1602
Query: 473 S----------SPYSSGASPDYSPSA---GYSPTLPGYSPS 390
+ SP S SP YSP++ GY+PT P YSP+
Sbjct: 1603 AYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPTSPVYSPA 1643
Score = 61.2 bits (147), Expect = 7e-08
Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 14/74 (18%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPN--YSPTSP----SYSPTSPSY--------SPSSPT 483
SP+ A SP++ SPA YSPTSPN Y+PTSP +YSPTSP+Y SP+SP
Sbjct: 1608 SPTSAMSPTSPVYSPA--YSPTSPNLGYAPTSPVYSPAYSPTSPNYGYSPTSPLSPTSPA 1665
Query: 482 YSPSSPYSSGASPD 441
YSP+ P+S D
Sbjct: 1666 YSPTDPFSPNPFQD 1679
[211][TOP]
>UniRef100_Q4UCP5 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4UCP5_THEAN
Length = 1678
Score = 69.3 bits (168), Expect = 2e-10
Identities = 47/96 (48%), Positives = 57/96 (59%), Gaps = 10/96 (10%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPN--YSPTSPSYSPTSPSYSPSSPT--YSPSSP-YSS 456
SP+ A SP++ SPA YSPTSP SPTSP Y SP+YSP+SP Y+P+SP YS
Sbjct: 1585 SPTSALSPTSPVYSPA--YSPTSPTSAMSPTSPVY---SPAYSPTSPNLGYAPTSPVYSP 1639
Query: 455 GASP-----DYSPSAGYSPTLPGYSPSSTGQYTPHE 363
SP YSP++ SPT P YSP+ P E
Sbjct: 1640 AYSPTTPNYGYSPTSPLSPTSPAYSPTDPFSPNPFE 1675
Score = 68.6 bits (166), Expect = 4e-10
Identities = 49/108 (45%), Positives = 62/108 (57%), Gaps = 21/108 (19%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPT-------SPNYSPTSP--------SYSPT----SPSYS 498
SP+ SP++ +SP SP SPT SP YSPTSP + SPT SP+YS
Sbjct: 1544 SPTSPMSPTSP-MSPTSPMSPTSAISPVYSPAYSPTSPMSPTSPTSALSPTSPVYSPAYS 1602
Query: 497 PSSPT--YSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTPHEG 360
P+SPT SP+SP S A SP+ GY+PT P YSP+ + TP+ G
Sbjct: 1603 PTSPTSAMSPTSPVYSPAYSPTSPNLGYAPTSPVYSPAYS-PTTPNYG 1649
Score = 68.2 bits (165), Expect = 5e-10
Identities = 47/96 (48%), Positives = 54/96 (56%), Gaps = 14/96 (14%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTS----------PNYSPTSPS--YSPTSPSYSPSSPTYSPS 471
S YSP+ + SP SP SPTS P YSPTSP+ SPTSP YSP+ YSP+
Sbjct: 1568 SPVYSPAYSPTSPMSPTSPTSALSPTSPVYSPAYSPTSPTSAMSPTSPVYSPA---YSPT 1624
Query: 470 SPYSSGA--SPDYSPSAGYSPTLPGYSPSSTGQYTP 369
SP A SP YSP+ YSPT P Y S T +P
Sbjct: 1625 SPNLGYAPTSPVYSPA--YSPTTPNYGYSPTSPLSP 1658
Score = 60.1 bits (144), Expect = 1e-07
Identities = 36/74 (48%), Positives = 46/74 (62%), Gaps = 14/74 (18%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPN--YSPTSP----SYSPTSPSY--------SPSSPT 483
SP+ A SP++ SPA YSPTSPN Y+PTSP +YSPT+P+Y SP+SP
Sbjct: 1605 SPTSAMSPTSPVYSPA--YSPTSPNLGYAPTSPVYSPAYSPTTPNYGYSPTSPLSPTSPA 1662
Query: 482 YSPSSPYSSGASPD 441
YSP+ P+S D
Sbjct: 1663 YSPTDPFSPNPFED 1676
[212][TOP]
>UniRef100_Q9FI54 Genomic DNA, chromosome 5, TAC clone:K3K7 n=1 Tax=Arabidopsis
thaliana RepID=Q9FI54_ARATH
Length = 314
Score = 68.2 bits (165), Expect = 5e-10
Identities = 39/69 (56%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = -1
Query: 566 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTLPGYSPS 390
YSPTSP+YSPTSPSY P S S SP S +YSP SP S SP YSP S +SP L SP
Sbjct: 113 YSPTSPSYSPTSPSYRPNSSSDSPDSHSYSPVSPDHSLVSPQYSPTSTHHSPILS--SPP 170
Query: 389 STGQYTPHE 363
Y P +
Sbjct: 171 EDYGYGPDD 179
Score = 66.2 bits (160), Expect = 2e-09
Identities = 37/64 (57%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -1
Query: 581 SPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS-PSAGYSPTLP 405
S S Y SP YSPTSPSYSPTSPSY P+S + SP S S SPD+S S YSPT
Sbjct: 101 SDLSDYILKSPTYSPTSPSYSPTSPSYRPNSSSDSPDSHSYSPVSPDHSLVSPQYSPTST 160
Query: 404 GYSP 393
+SP
Sbjct: 161 HHSP 164
[213][TOP]
>UniRef100_A9U3I4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9U3I4_PHYPA
Length = 291
Score = 68.2 bits (165), Expect = 5e-10
Identities = 50/110 (45%), Positives = 60/110 (54%), Gaps = 17/110 (15%)
Frame = -1
Query: 620 SPSIA---YSPSNARLSPASPYSPT--SPNYSPTSPSYSPTSPS-YSPSSPTYS--PSSP 465
SPS + YSP+ + SP +P SPT SP YSP S SPT+PS SPSSPTYS P SP
Sbjct: 104 SPSYSSPPYSPTPSSSSPTTPSSPTYSSPPYSPAPSSPSPTAPSGPSPSSPTYSSPPYSP 163
Query: 464 YSSGASPD--------YSPS-AGYSPTLPGYSPSSTGQYTPHEGDKKDKT 342
SG+SP YSP+ + SPT P S+ Y+P D T
Sbjct: 164 TPSGSSPSSPTYSSPPYSPTPSSSSPTTPSSPSYSSPPYSPTPSDPSPST 213
Score = 60.8 bits (146), Expect = 9e-08
Identities = 45/103 (43%), Positives = 52/103 (50%), Gaps = 24/103 (23%)
Frame = -1
Query: 605 YSPSNARLSPASPY--SPTSPNYSPTSPSYSPTSPSYSPSSPTYS--PSSPYSSGASP-- 444
YSP+ + SP +P SP+SP YS SP YSPT SPSSPTYS P SP S +SP
Sbjct: 134 YSPAPSSPSPTAPSGPSPSSPTYS--SPPYSPTPSGSSPSSPTYSSPPYSPTPSSSSPTT 191
Query: 443 ----------------DYSPSAGYSPTL--PGYSPSSTGQYTP 369
D SPS SPT P YSP+ +G P
Sbjct: 192 PSSPSYSSPPYSPTPSDPSPSTPSSPTYSSPPYSPTPSGPSPP 234
Score = 60.5 bits (145), Expect = 1e-07
Identities = 41/85 (48%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSP---SSPTYS--PSSPYSS 456
SPS + P + S SP +P+SP YS SP YSPT SP SSPTYS P SP S
Sbjct: 194 SPSYSSPPYSPTPSDPSPSTPSSPTYS--SPPYSPTPSGPSPPTPSSPTYSSPPYSPTPS 251
Query: 455 GASPDYSPSAGYSPTLPGYSPSSTG 381
G+SP S YS P YSP+ +G
Sbjct: 252 GSSPTTPSSPSYSS--PPYSPTPSG 274
Score = 58.9 bits (141), Expect = 3e-07
Identities = 49/118 (41%), Positives = 58/118 (49%), Gaps = 34/118 (28%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPT--SPNYSPTSPSYSPT---SPSYS-------------- 498
SP+ + P + S +SP SPT SP YSPT S SPT SPSYS
Sbjct: 153 SPTYSSPPYSPTPSGSSPSSPTYSSPPYSPTPSSSSPTTPSSPSYSSPPYSPTPSDPSPS 212
Query: 497 -PSSPTYS--PSSPYSSG-----------ASPDYSPS-AGYSPTLPGYSPSSTGQYTP 369
PSSPTYS P SP SG +SP YSP+ +G SPT P S+ Y+P
Sbjct: 213 TPSSPTYSSPPYSPTPSGPSPPTPSSPTYSSPPYSPTPSGSSPTTPSSPSYSSPPYSP 270
Score = 55.5 bits (132), Expect = 4e-06
Identities = 47/111 (42%), Positives = 56/111 (50%), Gaps = 27/111 (24%)
Frame = -1
Query: 620 SPSIAYSPSNARLSP---ASPYSPTSPNY-SPTSPSYSPTSPSYSP----------SSPT 483
SP +A PS +P + PYSP +P+ SP +PS S +SP YSP SSPT
Sbjct: 69 SPPVASDPSPVTPTPVYSSPPYSPGTPSGGSPVTPSPSYSSPPYSPTPSSSSPTTPSSPT 128
Query: 482 YS-------PSSPY------SSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
YS PSSP S +SP YS S YSPT G SPSS +P
Sbjct: 129 YSSPPYSPAPSSPSPTAPSGPSPSSPTYS-SPPYSPTPSGSSPSSPTYSSP 178
Score = 55.1 bits (131), Expect = 5e-06
Identities = 36/66 (54%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Frame = -1
Query: 605 YSPSNARLSPASPYSPT--SPNYSPTSPSYSPTSPSY-SPSSPTYSP--SSPYSSGASPD 441
YSP+ + SP +P SPT SP YSPT SPT+PS S SSP YSP S SG SP
Sbjct: 224 YSPTPSGPSPPTPSSPTYSSPPYSPTPSGSSPTTPSSPSYSSPPYSPTPSGGSPSGGSPS 283
Query: 440 YSPSAG 423
SP AG
Sbjct: 284 GSPPAG 289
[214][TOP]
>UniRef100_O09451 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bonnemaisonia hamifera
RepID=O09451_9FLOR
Length = 1732
Score = 67.8 bits (164), Expect = 7e-10
Identities = 49/105 (46%), Positives = 60/105 (57%), Gaps = 23/105 (21%)
Frame = -1
Query: 614 SIAYSPSN------ARLSPASPYSPTSPNYSPTSP-SYSPTSP-SYSPSSPT---YSPSS 468
S +YSPS+ SP + Y SP YSP+SP +YSP+SP ++SPSSP YSPS+
Sbjct: 1628 SRSYSPSSPSYNGRGAASPGANYVAASPGYSPSSPGAYSPSSPAAFSPSSPAAGGYSPST 1687
Query: 467 P----------YSSGASPDYSPS--AGYSPTLPGYSPSSTGQYTP 369
P YS SP Y PS G SP+ P YSPSS QY+P
Sbjct: 1688 PAYTANAAANQYSYARSPRYPPSYANGTSPSSPQYSPSSP-QYSP 1731
Score = 55.1 bits (131), Expect = 5e-06
Identities = 41/100 (41%), Positives = 49/100 (49%), Gaps = 24/100 (24%)
Frame = -1
Query: 596 SNARLSPASP-YSPTSPNYSP---TSPSYSP--------------TSPSYSPS------S 489
S+ +PASP Y PTSP SP SP+ SP +P +PS S
Sbjct: 1569 SSGTFAPASPAYRPTSPGPSPYAAQSPAQSPGVQYSPDKSRVQVQRAPPTAPSAAGGGAS 1628
Query: 488 PTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTP 369
+YSPSSP +G SP A Y PGYSPSS G Y+P
Sbjct: 1629 RSYSPSSPSYNGRGAA-SPGANYVAASPGYSPSSPGAYSP 1667
[215][TOP]
>UniRef100_Q1WKU4 Putative RNA polymerase II 215 kD subunit (Fragment) n=1
Tax=Drosophila erecta RepID=Q1WKU4_DROER
Length = 760
Score = 67.8 bits (164), Expect = 7e-10
Identities = 41/77 (53%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S ++SP++ SP+SP SP Y P SPS SPSYSP+SP Y+ SSP GASP+YS
Sbjct: 688 SPSWSPAHPGSSPSSPGPSMSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYS 741
Query: 434 PSA-GYSPTLPGYSPSS 387
PS+ YSPT P Y+ +S
Sbjct: 742 PSSPNYSPTSPLYASAS 758
Score = 60.5 bits (145), Expect = 1e-07
Identities = 32/59 (54%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = -1
Query: 617 PSIA-YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
PS++ Y P++ +SP+ YSPTSPNY+ +SP + SP+YSPSSP YSP+SP + ASP
Sbjct: 705 PSMSPYFPASPSVSPS--YSPTSPNYTASSPGGA--SPNYSPSSPNYSPTSPLYASASP 759
Score = 54.7 bits (130), Expect = 6e-06
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = -1
Query: 572 SPYSPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPT 411
S +P P++SP++ S S SPS+SP+ P SPSSP S ASP SPS YSPT
Sbjct: 667 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPT 724
Query: 410 LPGYSPSSTGQYTPH 366
P Y+ SS G +P+
Sbjct: 725 SPNYTASSPGGASPN 739
[216][TOP]
>UniRef100_Q1WKU0 Putative RNA polymerase II 215 kD subunit (Fragment) n=2
Tax=melanogaster subgroup RepID=Q1WKU0_DROYA
Length = 766
Score = 67.8 bits (164), Expect = 7e-10
Identities = 41/77 (53%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S ++SP++ SP+SP SP Y P SPS SPSYSP+SP Y+ SSP GASP+YS
Sbjct: 688 SPSWSPAHPGSSPSSPGPSMSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYS 741
Query: 434 PSA-GYSPTLPGYSPSS 387
PS+ YSPT P Y+ +S
Sbjct: 742 PSSPNYSPTSPLYASAS 758
Score = 62.8 bits (151), Expect = 2e-08
Identities = 33/62 (53%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Frame = -1
Query: 617 PSIA-YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
PS++ Y P++ +SP+ YSPTSPNY+ +SP + SP+YSPSSP YSP+SP + ASP
Sbjct: 705 PSMSPYFPASPSVSPS--YSPTSPNYTASSPGGA--SPNYSPSSPNYSPTSPLYASASPR 760
Query: 440 YS 435
Y+
Sbjct: 761 YA 762
Score = 57.0 bits (136), Expect = 1e-06
Identities = 27/54 (50%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
Frame = -1
Query: 620 SPSIA--YSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP 465
SPS++ YSP++ + +SP SPNYSP+SP+YSPTSP Y+ +SP Y+ ++P
Sbjct: 714 SPSVSPSYSPTSPNYTASSP-GGASPNYSPSSPNYSPTSPLYASASPRYASTTP 766
Score = 54.7 bits (130), Expect = 6e-06
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = -1
Query: 572 SPYSPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPT 411
S +P P++SP++ S S SPS+SP+ P SPSSP S ASP SPS YSPT
Sbjct: 667 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPT 724
Query: 410 LPGYSPSSTGQYTPH 366
P Y+ SS G +P+
Sbjct: 725 SPNYTASSPGGASPN 739
[217][TOP]
>UniRef100_UPI00004C0623 PREDICTED: similar to zinc finger protein 239 (predicted) isoform 1
n=1 Tax=Canis lupus familiaris RepID=UPI00004C0623
Length = 554
Score = 67.0 bits (162), Expect = 1e-09
Identities = 39/101 (38%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 426
S S + P+ ++P SP+ SP + P SP Y P SP Y P SP SP Y P S
Sbjct: 88 SRSPGFVPPSPEFAPRSPDSDSQSPEFEPQSPRYEPQSPGYEPRSPGYEPKSPGYEPKSP 147
Query: 425 GYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDA--SKDDKG 309
GY P PGY S G Y P + K ++ + +A SK ++G
Sbjct: 148 GYEPRSPGYESQSPG-YEPQNPEFKTQSPEFEAQSSKFEEG 187
Score = 64.7 bits (156), Expect = 6e-09
Identities = 34/79 (43%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -1
Query: 617 PSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
PS ++P + SP + P SP Y P SP Y P SP Y P SP Y P SP SP
Sbjct: 96 PSPEFAPRSPDSDSQSPEFEPQSPRYEPQSPGYEPRSPGYEPKSPGYEPKSPGYEPRSPG 155
Query: 440 Y-SPSAGYSPTLPGYSPSS 387
Y S S GY P P + S
Sbjct: 156 YESQSPGYEPQNPEFKTQS 174
[218][TOP]
>UniRef100_C6F1F7 DNA-directed RNA polymerase n=1 Tax=Plasmodium gallinaceum
RepID=C6F1F7_PLAGA
Length = 2200
Score = 66.6 bits (161), Expect = 2e-09
Identities = 44/94 (46%), Positives = 51/94 (54%), Gaps = 21/94 (22%)
Frame = -1
Query: 605 YSPSNARLSPASP-----YSPTSPN-----------YSPTSPSYSPTSPSYSPSSPTYSP 474
YSPS + SP+ YSPTSP Y+ SP YS TSP YSP SP YSP
Sbjct: 2039 YSPSYSPTSPSYNADNVYYSPTSPKNQMDDVKSNIKYNVMSPVYSVTSPKYSPMSPQYSP 2098
Query: 473 SSPYSSG-ASPDYSP----SAGYSPTLPGYSPSS 387
+SP ++ SP YSP S +SPT P YS SS
Sbjct: 2099 TSPVANNPGSPHYSPYSITSPKFSPTSPAYSISS 2132
Score = 56.2 bits (134), Expect = 2e-06
Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Frame = -1
Query: 605 YSPSNARLSPASPYS--PTSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
YSP + + SP SP + P SP+YSP TSP +SPTSP+YS SSP Y ++ ++
Sbjct: 2089 YSPMSPQYSPTSPVANNPGSPHYSPYSITSPKFSPTSPAYSISSPVYDKNAVLNN----- 2143
Query: 440 YSPSAGYSPTLPGY---SPSSTGQYT--PHEGDKKDKTGKKDASKDDKGNP 303
P P Y SP Q T H +T K + DD +P
Sbjct: 2144 -------QPLSPAYIIQSPVQVKQNTQDAHMFSPIQQTNKNETQNDDPFSP 2187
[219][TOP]
>UniRef100_C6F091 RNA polymerase II (Fragment) n=1 Tax=Plasmodium berghei
RepID=C6F091_PLABE
Length = 161
Score = 66.6 bits (161), Expect = 2e-09
Identities = 45/102 (44%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Frame = -1
Query: 596 SNARLSPASPYSPTSPN------YSPTSPSYSPTSPSYSPSSPTYSPSSPY-SSGASPDY 438
+NA SP SP + S + Y+ SP YS TSP YSP+SP YSPSSP ++ +SP Y
Sbjct: 12 NNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQY 71
Query: 437 SP----SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDAS 324
SP S +SPT P YS SS P ++ TGK S
Sbjct: 72 SPYSITSPKFSPTSPAYSISS-----PVYDKNENMTGKNPLS 108
Score = 55.5 bits (132), Expect = 4e-06
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Frame = -1
Query: 605 YSPSNARLSPASPY--SPTSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
YSP++ + SP+SP +P+SP YSP TSP +SPTSP+YS SSP Y + +
Sbjct: 49 YSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKNENMT------ 102
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTPHEGDKK-----DKTGKKDASKDDKGNP 303
G +P P Y S Q + + + G D DD +P
Sbjct: 103 -----GKNPLSPAYMLQSRVQIRQNAQGTQVFSPIQQGGAHDVQNDDPFSP 148
[220][TOP]
>UniRef100_UPI00016E658E UPI00016E658E related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E658E
Length = 1628
Score = 65.9 bits (159), Expect = 3e-09
Identities = 38/69 (55%), Positives = 43/69 (62%), Gaps = 9/69 (13%)
Frame = -1
Query: 614 SIAYSP---SNARLSPASPYSPT-----SPNYSPTSPSYSPTSP-SYSPSSPTYSPSSPY 462
S A+SP S PASPY P+ SPNYSPTSP+Y P SP Y+P SP YSP+SP
Sbjct: 1560 SPAWSPTPGSPGSPGPASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPS 1619
Query: 461 SSGASPDYS 435
S SP YS
Sbjct: 1620 YSPTSPSYS 1628
Score = 57.4 bits (137), Expect = 9e-07
Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPN-YSPTSPSYSPTSPSYSPSSPTYS 477
SP A SP+ + SPA Y P SP Y+P SP YSPTSPSYSP+SP+YS
Sbjct: 1582 SPGGAMSPNYSPTSPA--YEPRSPGGYTPQSPGYSPTSPSYSPTSPSYS 1628
Score = 54.7 bits (130), Expect = 6e-06
Identities = 41/99 (41%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Frame = -1
Query: 614 SIAYSPSNARLSPA---------SPYSPTSPNYSPTSPS-YSPTSPSYSPS-SPTYSPSS 468
S A +P N +PA S +P + +SP++ S S SP YSP+ SPT P S
Sbjct: 1512 SPAMTPWNTGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPT--PGS 1569
Query: 467 PYSSGASPDYSPSAG------YSPTLPGYSPSSTGQYTP 369
P S G + Y PS G YSPT P Y P S G YTP
Sbjct: 1570 PGSPGPASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTP 1608
[221][TOP]
>UniRef100_A3AU48 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=A3AU48_ORYSJ
Length = 269
Score = 65.9 bits (159), Expect = 3e-09
Identities = 31/70 (44%), Positives = 44/70 (62%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
+PS +SPS SP YSP++P SP YSP++P +SP Y+PS+P+ ASPD
Sbjct: 77 APSPPWSPSRRAASP--DYSPSTPPRRAASPDYSPSTPPRRAASPDYTPSTPWRRAASPD 134
Query: 440 YSPSAGYSPT 411
Y+PS + P+
Sbjct: 135 YAPSTPWKPS 144
Score = 56.6 bits (135), Expect = 2e-06
Identities = 36/79 (45%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPS----SPTYSPSSPYSSGASPD 441
Y+PS ASP Y+P++P SP ++P SP +SPS SP YSPS+P ASPD
Sbjct: 48 YTPSTPWRRAASPDYTPSTPWRRAASPDHAP-SPPWSPSRRAASPDYSPSTPPRRAASPD 106
Query: 440 YSPSA-GYSPTLPGYSPSS 387
YSPS P Y+PS+
Sbjct: 107 YSPSTPPRRAASPDYTPST 125
Score = 55.5 bits (132), Expect = 4e-06
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Frame = -1
Query: 560 PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPT----LPGYSP 393
P P + SP Y+P++P +SP Y+PS+P+ ASPD++PS +SP+ P YSP
Sbjct: 36 PPPPPRTAASPEYTPSTPWRRAASPDYTPSTPWRRAASPDHAPSPPWSPSRRAASPDYSP 95
Query: 392 SS 387
S+
Sbjct: 96 ST 97
[222][TOP]
>UniRef100_UPI00017932FD PREDICTED: similar to Cuticular protein 76Bd CG9299-PB n=1
Tax=Acyrthosiphon pisum RepID=UPI00017932FD
Length = 670
Score = 65.5 bits (158), Expect = 3e-09
Identities = 29/79 (36%), Positives = 52/79 (65%)
Frame = -1
Query: 617 PSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
PS +Y+P+ PA Y+P + +Y+P +PSY+P +PSY+P++P+Y+P++P A+ Y
Sbjct: 515 PSPSYAPA-----PAPAYAPAAQSYAPAAPSYAPAAPSYAPAAPSYAPAAPAYGPAAQSY 569
Query: 437 SPSAGYSPTLPGYSPSSTG 381
+P+ Y+ + +P TG
Sbjct: 570 APAKTYASYV---TPPKTG 585
Score = 63.9 bits (154), Expect = 1e-08
Identities = 32/81 (39%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPT-SPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S S + S +A S A+P P SP+Y+P +P+Y+P + SY+P++P+Y+P++P + A+P
Sbjct: 495 SYSASQSYQSASYSAAAPSYP-SPSYAPAPAPAYAPAAQSYAPAAPSYAPAAPSYAPAAP 553
Query: 443 DYSPSA-GYSPTLPGYSPSST 384
Y+P+A Y P Y+P+ T
Sbjct: 554 SYAPAAPAYGPAAQSYAPAKT 574
Score = 54.3 bits (129), Expect = 8e-06
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPS-SPTYSPSSPYSSGASP 444
+P + +PS + S ++ S S +YS +PSY SPSY+P+ +P Y+P++ + A+P
Sbjct: 482 APEYSAAPSYSAPSYSASQSYQSASYSAAAPSYP--SPSYAPAPAPAYAPAAQSYAPAAP 539
Query: 443 DYSPSA-GYSPTLPGYSPSS 387
Y+P+A Y+P P Y+P++
Sbjct: 540 SYAPAAPSYAPAAPSYAPAA 559
[223][TOP]
>UniRef100_C6F096 RNA polymerase II (Fragment) n=1 Tax=Plasmodium yoelii nigeriensis
RepID=C6F096_9APIC
Length = 161
Score = 65.5 bits (158), Expect = 3e-09
Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 11/81 (13%)
Frame = -1
Query: 596 SNARLSPASPYSPTSPN------YSPTSPSYSPTSPSYSPSSPTYSPSSPY-SSGASPDY 438
+NA SP SP + S + Y+ SP YS TSP YSP+SP YSPSSP ++ +SP Y
Sbjct: 12 NNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQY 71
Query: 437 SP----SAGYSPTLPGYSPSS 387
SP S +SPT P YS SS
Sbjct: 72 SPYSITSPKFSPTSPAYSISS 92
Score = 57.0 bits (136), Expect = 1e-06
Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Frame = -1
Query: 605 YSPSNARLSPASPY--SPTSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
YSP++ + SP+SP +P+SP YSP TSP +SPTSP+YS SSP Y +
Sbjct: 49 YSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKT---------- 98
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTPHEGDKK-----DKTGKKDASKDDKGNP 303
AG +P P Y S Q + + + G D DD +P
Sbjct: 99 -ENMAGKNPLSPAYMLQSRVQIRQNAQGTQVFSPIQQGGANDVQNDDPFSP 148
[224][TOP]
>UniRef100_C6F093 RNA polymerase II (Fragment) n=2 Tax=Plasmodium yoelii
RepID=C6F093_PLAYO
Length = 161
Score = 65.5 bits (158), Expect = 3e-09
Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 11/81 (13%)
Frame = -1
Query: 596 SNARLSPASPYSPTSPN------YSPTSPSYSPTSPSYSPSSPTYSPSSPY-SSGASPDY 438
+NA SP SP + S + Y+ SP YS TSP YSP+SP YSPSSP ++ +SP Y
Sbjct: 12 NNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSSPVPNNPSSPQY 71
Query: 437 SP----SAGYSPTLPGYSPSS 387
SP S +SPT P YS SS
Sbjct: 72 SPYSITSPKFSPTSPAYSISS 92
Score = 57.0 bits (136), Expect = 1e-06
Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Frame = -1
Query: 605 YSPSNARLSPASPY--SPTSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
YSP++ + SP+SP +P+SP YSP TSP +SPTSP+YS SSP Y +
Sbjct: 49 YSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKN---------- 98
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTPHEGDKK-----DKTGKKDASKDDKGNP 303
AG +P P Y S Q + + + G D DD +P
Sbjct: 99 -ENMAGKNPLSPAYMLQSRVQIRQNAQGTQVFSPIQQGGANDVQNDDPFSP 148
[225][TOP]
>UniRef100_Q7XRB2 OSJNBa0006B20.10 protein n=3 Tax=Oryza sativa RepID=Q7XRB2_ORYSJ
Length = 335
Score = 64.7 bits (156), Expect = 6e-09
Identities = 39/101 (38%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY--- 438
Y+P + ASP YSP SP SP Y+P SPS +SP Y+P SP ASPDY
Sbjct: 106 YTPESPPRRAASPDYSPESPPRRAASPDYTPASPSRRAASPDYTPESPPRRAASPDYTPA 165
Query: 437 SPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDD 315
SPS + + P Y+P S + D T + A+ D
Sbjct: 166 SPSRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASPD 206
Score = 62.8 bits (151), Expect = 2e-08
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Frame = -1
Query: 617 PSIAYSPSNA--RLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
PS Y+P++ R + + Y+P SP SP YSP SP +SP Y+P SP ASP
Sbjct: 59 PSPDYTPASPPHRRAASPDYTPESPPRRAASPDYSPASPPRRAASPDYTPESPPRRAASP 118
Query: 443 DYSP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKD-DKGNP*KRVRIGNP 276
DYSP S P Y+P+S + + ++ AS D +P +R +P
Sbjct: 119 DYSPESPPRRAASPDYTPASPSRRAASPDYTPESPPRRAASPDYTPASPSRRAAASSP 176
Score = 61.6 bits (148), Expect = 5e-08
Identities = 38/100 (38%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Frame = -1
Query: 617 PSIAYSPSNARLSPASPYSPTSPNYSP--------TSPSYSPTSPSYSPSSPTYSPSSPY 462
P A SP SP+ + +SP+Y+P SP YSP++P +SP YSPS+P
Sbjct: 154 PRRAASPDYTPASPSRRAAASSPDYTPESPPRRRAASPDYSPSTPPRRAASPDYSPSTPP 213
Query: 461 SSGASPDYSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKT 342
ASPDYSPS +P SP T P D T
Sbjct: 214 RRAASPDYSPS---TPPRRAASPDYTPMSPPRRAASPDYT 250
Score = 60.5 bits (145), Expect = 1e-07
Identities = 38/90 (42%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = -1
Query: 605 YSP-SNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP 432
Y+P S R ASP YSP++P SP YSP++P +SP YSPS+P ASPDY+P
Sbjct: 178 YTPESPPRRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYTP 237
Query: 431 SAGYSPTLPGYSPSSTGQYTPHEGDKKDKT 342
SP SP T P D T
Sbjct: 238 ---MSPPRRAASPDYTQMTPPRRAASPDYT 264
Score = 59.7 bits (143), Expect = 2e-07
Identities = 40/114 (35%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSPS ASP YSP++P SP Y+P SP +SP Y+ +P ASPDY+PS
Sbjct: 207 YSPSTPPRRAASPDYSPSTPPRRAASPDYTPMSPPRRAASPDYTQMTPPRRAASPDYTPS 266
Query: 428 AGYSP--TLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP*KRVRIGNPC 273
P P Y+PS TP + +P +R R G C
Sbjct: 267 TPPPPRAASPDYTPS-----TPPSSPLPSAAESFTVPPPRRYHPYQRSRSGGAC 315
[226][TOP]
>UniRef100_UPI0001792AA2 PREDICTED: hypothetical protein n=1 Tax=Acyrthosiphon pisum
RepID=UPI0001792AA2
Length = 649
Score = 64.3 bits (155), Expect = 8e-09
Identities = 35/78 (44%), Positives = 46/78 (58%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAG 423
SPS SP+ Y +SP+Y +SPSY +S SY SSP+Y SSP G+SP Y S+
Sbjct: 464 SPSYGGSSPS--YGGSSPSYGGSSPSYGGSSSSYGGSSPSYGGSSPSYGGSSPSYGSSSL 521
Query: 422 YSPTLPGYSPSSTGQYTP 369
Y+ P YS SS+ +P
Sbjct: 522 YAGNSPSYSGSSSSYGSP 539
Score = 57.8 bits (138), Expect = 7e-07
Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASP 444
S S +Y S+ +SP Y +SP+Y SPSY +S SY SSP+Y SS G+SP
Sbjct: 385 SSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSYGGSSP 444
Query: 443 DYSPSA----GYSPTLPGYSPSSTGQYTPHEGDKKDKTG 339
Y S+ G SP+ G SPS G + G G
Sbjct: 445 SYGGSSHSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGG 483
Score = 57.8 bits (138), Expect = 7e-07
Identities = 39/97 (40%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Frame = -1
Query: 566 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY---SPS-AGYSPTLPGY 399
Y +SP+Y +SPSY +SPSY SSP+Y SSP G+S Y SPS G SP+ G
Sbjct: 453 YGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSSSYGGSSPSYGGSSPSYGGS 512
Query: 398 SPS--STGQY---TPHEGDKKDKTGKKDASKDDKGNP 303
SPS S+ Y +P G K G+P
Sbjct: 513 SPSYGSSSLYAGNSPSYSGSSSSYGSPSPYKPSYGSP 549
Score = 57.4 bits (137), Expect = 9e-07
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP YS S + +S Y +S +Y +S SY +SPSY SSP+Y SSP G+SP
Sbjct: 351 SPPQKYSSSPSFGGGSSSYGGSSSSYGGSSSSYGSSSPSYGGSSPSYGGSSPSYGGSSPS 410
Query: 440 Y---SPS-AGYSPTLPGYSPSSTGQYTPHEGDKKDKTG 339
Y SPS G S + G SPS G + G G
Sbjct: 411 YGGNSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGG 448
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = -1
Query: 566 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY---SPSAGYSPTLPGYS 396
Y +SP+Y +S SY +SPSY SSP+Y SSP G+SP Y SPS G S + G S
Sbjct: 439 YGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSSSYGGS 498
Query: 395 PSSTGQYTPHEGDKKDKTG 339
S G +P G G
Sbjct: 499 SPSYGGSSPSYGGSSPSYG 517
Score = 56.2 bits (134), Expect = 2e-06
Identities = 39/97 (40%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Frame = -1
Query: 602 SPSNARLSPA-----SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
SPS SP+ Y +SP+Y +S SY +SPSY SS +Y SSP G+SP Y
Sbjct: 408 SPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSY 467
Query: 437 ---SPS-AGYSPTLPGYSPSSTGQYTPHEGDKKDKTG 339
SPS G SP+ G SPS G + + G G
Sbjct: 468 GGSSPSYGGSSPSYGGSSPSYGGSSSSYGGSSPSYGG 504
[227][TOP]
>UniRef100_Q7RJS0 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RJS0_PLAYO
Length = 2312
Score = 64.3 bits (155), Expect = 8e-09
Identities = 44/97 (45%), Positives = 50/97 (51%), Gaps = 21/97 (21%)
Frame = -1
Query: 614 SIAYSPS--------NARLSPASP-------------YSPTSPNYSPTSPSYSPTSPSYS 498
S +YSP+ NA SP SP Y+ SP YS TSP YSPTSP YS
Sbjct: 2149 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYS 2208
Query: 497 PSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSS 387
PSSP P++P S SP S +SPT P YS SS
Sbjct: 2209 PSSPV--PNNPSSPQYSPYSITSPKFSPTSPAYSISS 2243
Score = 57.0 bits (136), Expect = 1e-06
Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Frame = -1
Query: 605 YSPSNARLSPASPY--SPTSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
YSP++ + SP+SP +P+SP YSP TSP +SPTSP+YS SSP Y +
Sbjct: 2200 YSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKN---------- 2249
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTPHEGDKK-----DKTGKKDASKDDKGNP 303
AG +P P Y S Q + + + G D DD +P
Sbjct: 2250 -ENMAGKNPLSPAYMLQSRVQIRQNAQGTQVFSPIQQGGANDVQNDDPFSP 2299
[228][TOP]
>UniRef100_Q25655 RNA polymerase largest subunit (Fragment) n=1 Tax=Plasmodium
berghei RepID=Q25655_PLABE
Length = 204
Score = 64.3 bits (155), Expect = 8e-09
Identities = 48/118 (40%), Positives = 57/118 (48%), Gaps = 21/118 (17%)
Frame = -1
Query: 614 SIAYSPS--------NARLSPASP-------------YSPTSPNYSPTSPSYSPTSPSYS 498
S +YSP+ NA SP SP Y+ SP YS TSP YSPTSP YS
Sbjct: 41 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPKYS 100
Query: 497 PSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDAS 324
P+SP P++P S SP S +SPT P YS SS P ++ TGK S
Sbjct: 101 PTSPV--PNNPSSPQYSPYSITSPKFSPTSPAYSISS-----PVYDKNENMTGKNPLS 151
[229][TOP]
>UniRef100_Q3JTV6 Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei
1710b RepID=Q3JTV6_BURP1
Length = 364
Score = 63.9 bits (154), Expect = 1e-08
Identities = 48/100 (48%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS--SGAS 447
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S S S
Sbjct: 240 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSPTSPTSPTS 294
Query: 446 P--DYSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKK 333
P SP++ SPT P S T +P D+ D+ G++
Sbjct: 295 PTSPTSPTSPTSPTSPTSPTSPTSPTSPGRSDQYDRRGRQ 334
Score = 58.9 bits (141), Expect = 3e-07
Identities = 42/78 (53%), Positives = 51/78 (65%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAG 423
+PS AR P P SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP SP++
Sbjct: 170 APSRARRRPRRPVSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSP 223
Query: 422 YSPTLPGYSPSSTGQYTP 369
SPT P S T +P
Sbjct: 224 TSPTSPTSPTSPTSPTSP 241
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 183 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 236
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 237 -SPTSPTSPTSPTSPTSPTSPTSP 259
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 186 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 239
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 240 -SPTSPTSPTSPTSPTSPTSPTSP 262
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 189 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 242
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 243 -SPTSPTSPTSPTSPTSPTSPTSP 265
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 192 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 245
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 246 -SPTSPTSPTSPTSPTSPTSPTSP 268
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 195 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 248
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 249 -SPTSPTSPTSPTSPTSPTSPTSP 271
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 198 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 251
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 252 -SPTSPTSPTSPTSPTSPTSPTSP 274
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 201 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 254
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 255 -SPTSPTSPTSPTSPTSPTSPTSP 277
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 204 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 257
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 258 -SPTSPTSPTSPTSPTSPTSPTSP 280
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 207 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 260
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 261 -SPTSPTSPTSPTSPTSPTSPTSP 283
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 210 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 263
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 264 -SPTSPTSPTSPTSPTSPTSPTSP 286
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 213 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 266
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 267 -SPTSPTSPTSPTSPTSPTSPTSP 289
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 216 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 269
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 270 -SPTSPTSPTSPTSPTSPTSPTSP 292
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 219 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 272
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 273 -SPTSPTSPTSPTSPTSPTSPTSP 295
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 222 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 275
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 276 -SPTSPTSPTSPTSPTSPTSPTSP 298
[230][TOP]
>UniRef100_B1HHT1 Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei
S13 RepID=B1HHT1_BURPS
Length = 282
Score = 63.9 bits (154), Expect = 1e-08
Identities = 48/100 (48%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS--SGAS 447
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP S S S
Sbjct: 158 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSPTSPTSPTS 212
Query: 446 P--DYSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKK 333
P SP++ SPT P S T +P D+ D+ G++
Sbjct: 213 PTSPTSPTSPTSPTSPTSPTSPTSPTSPGRSDQYDRRGRQ 252
Score = 58.9 bits (141), Expect = 3e-07
Identities = 42/78 (53%), Positives = 51/78 (65%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAG 423
+PS AR P P SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP SP++
Sbjct: 115 APSRARRRPRRPVSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT-SPTSP 168
Query: 422 YSPTLPGYSPSSTGQYTP 369
SPT P S T +P
Sbjct: 169 TSPTSPTSPTSPTSPTSP 186
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 128 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 181
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 182 -SPTSPTSPTSPTSPTSPTSPTSP 204
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 131 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 184
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 185 -SPTSPTSPTSPTSPTSPTSPTSP 207
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 134 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 187
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 188 -SPTSPTSPTSPTSPTSPTSPTSP 210
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 137 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 190
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 191 -SPTSPTSPTSPTSPTSPTSPTSP 213
Score = 57.8 bits (138), Expect = 7e-07
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP+ SP++ SP SP SPTSP SPTSP+ SPTSP+ SP+SPT SP+SP +S SP
Sbjct: 140 SPTSPTSPTSPT-SPTSPTSPTSPT-SPTSPT-SPTSPT-SPTSPT-SPTSP-TSPTSPT 193
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTP 369
SP++ SPT P S T +P
Sbjct: 194 -SPTSPTSPTSPTSPTSPTSPTSP 216
[231][TOP]
>UniRef100_C6F098 RNA polymerase II (Fragment) n=2 Tax=Plasmodium vinckei
RepID=C6F098_PLAVN
Length = 161
Score = 63.9 bits (154), Expect = 1e-08
Identities = 40/83 (48%), Positives = 45/83 (54%), Gaps = 13/83 (15%)
Frame = -1
Query: 596 SNARLSPASP-------------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSS 456
+NA SP SP Y+ SP YS TSP YSPTSP YSPSSP P++P S
Sbjct: 12 NNAYYSPTSPKNQAGDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSSPV--PNNPSSP 69
Query: 455 GASPDYSPSAGYSPTLPGYSPSS 387
SP S +SPT P YS SS
Sbjct: 70 QYSPYSITSPKFSPTSPAYSISS 92
Score = 58.2 bits (139), Expect = 6e-07
Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Frame = -1
Query: 605 YSPSNARLSPASPY--SPTSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
YSP++ + SP+SP +P+SP YSP TSP +SPTSP+YS SSP Y S
Sbjct: 49 YSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKS---------- 98
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTPHEGDKK-----DKTGKKDASKDDKGNP 303
AG +P P Y S Q + + + G D DD +P
Sbjct: 99 -ENMAGKNPLSPAYMLQSRVQIRQNAQGTQVFSPIQQGGANDVQNDDPFSP 148
[232][TOP]
>UniRef100_C6F097 RNA polymerase II (Fragment) n=1 Tax=Plasmodium yoelii
RepID=C6F097_9APIC
Length = 161
Score = 63.5 bits (153), Expect = 1e-08
Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 11/81 (13%)
Frame = -1
Query: 596 SNARLSPASPYSPTSPN------YSPTSPSYSPTSPSYSPSSPTYSPSSPY-SSGASPDY 438
+NA SP SP + S + Y+ SP YS TSP YSP+ P YSPSSP ++ +SP Y
Sbjct: 12 NNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTXPQYSPSSPVPNNPSSPQY 71
Query: 437 SP----SAGYSPTLPGYSPSS 387
SP S +SPT P YS SS
Sbjct: 72 SPYSITSPKFSPTSPAYSISS 92
Score = 56.2 bits (134), Expect = 2e-06
Identities = 39/111 (35%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Frame = -1
Query: 605 YSPSNARLSPASPY--SPTSPNYSP---TSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
YSP+ + SP+SP +P+SP YSP TSP +SPTSP+YS SSP Y +
Sbjct: 49 YSPTXPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKT---------- 98
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTPHEGDKK-----DKTGKKDASKDDKGNP 303
AG +P P Y S Q + + + G D DD +P
Sbjct: 99 -ENMAGKNPLSPAYMLQSRVQIRQNAQGTQVFSPIQQGGANDVQNDDPFSP 148
[233][TOP]
>UniRef100_Q9AXN1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Botryocladia
uvarioides RepID=Q9AXN1_9FLOR
Length = 1712
Score = 63.2 bits (152), Expect = 2e-08
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = -1
Query: 581 SPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSP-YSSGASPDYSPSAGYSPTLP 405
SP + YSPTSP ++PTSP YS + P + YSP+ P Y++ ASP Y YSP P
Sbjct: 1598 SPGAQYSPTSPAFTPTSPGYSSATGPGRPGTGAYSPTGPSYNAAASPGYQSGINYSPGSP 1657
Query: 404 -GYSPSS 387
YSP+S
Sbjct: 1658 HTYSPNS 1664
Score = 61.2 bits (147), Expect = 7e-08
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 20/105 (19%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYS-------PTSPSYSPTSPSY-SPSSPTYSPSSPY 462
S A SP A+ SP SP ++PTSP YS P + +YSPT PSY + +SP Y Y
Sbjct: 1594 SPARSPG-AQYSPTSPAFTPTSPGYSSATGPGRPGTGAYSPTGPSYNAAASPGYQSGINY 1652
Query: 461 SSGASPDYSPSA-----------GYSPTLPGYSPSSTGQYTPHEG 360
S G+ YSP++ GYSP+ P Y+P + Y + G
Sbjct: 1653 SPGSPHTYSPNSPVFTPRSPAAHGYSPSTPQYNPQGSNPYGQNAG 1697
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/94 (36%), Positives = 47/94 (50%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
SP ++ SP A SP P SP ++P SP+Y +SP +P + SP
Sbjct: 1539 SPYVSASPGRASPYATSPAYPQSPGSYNAGSGFAPASPAYKVTSP--APGGYGGAYQSPA 1596
Query: 440 YSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTG 339
SP A YSPT P ++P+S G Y+ G + TG
Sbjct: 1597 RSPGAQYSPTSPAFTPTSPG-YSSATGPGRPGTG 1629
[234][TOP]
>UniRef100_O04142 DNA-directed RNA polymerase (Fragment) n=1 Tax=Porphyra yezoensis
RepID=O04142_PORYE
Length = 1685
Score = 63.2 bits (152), Expect = 2e-08
Identities = 40/96 (41%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSY-----------SPTSPSYSPSSPTYSP 474
SP + YSPS L+ +SP SP YSPTSPS SP SP Y P+SP Y+
Sbjct: 1589 SPGMGYSPSTPALAVSSP--GYSPGYSPTSPSVGARGGPAAGYASPQSPGYVPTSPAYAR 1646
Query: 473 SSPYSSGASPDYSPSA-GYSPTLPGYSPSSTGQYTP 369
+ A+ YSPS+ YSP+ P Y+ +S+ Y P
Sbjct: 1647 PGTVVAAANV-YSPSSPAYSPSSPNYAAASSPAYQP 1681
[235][TOP]
>UniRef100_B9G524 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9G524_ORYSJ
Length = 536
Score = 63.2 bits (152), Expect = 2e-08
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = -1
Query: 608 AYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP 432
+Y PS +P P Y+P P P+ P YSP PSY PS P Y+P P + P+Y+P
Sbjct: 348 SYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYAP 407
Query: 431 SAG-YSPTLPGYSPSSTGQYTP 369
Y+P PG +PS +Y P
Sbjct: 408 EPPVYAPYPPGITPSPP-EYAP 428
Score = 60.8 bits (146), Expect = 9e-08
Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = -1
Query: 617 PSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
P I PS + P+ P Y P+ P+Y P+ P Y+P P Y+P P PS P S P
Sbjct: 324 PEITPYPSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPS 383
Query: 440 YSPS-AGYSPTLPGYSPSSTGQYTP 369
Y PS Y+P P Y PS +Y P
Sbjct: 384 YVPSPPQYAPQPPSYVPSPP-EYAP 407
Score = 60.5 bits (145), Expect = 1e-07
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = -1
Query: 617 PSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
P + SP P+ P P+ P+Y P+ PSY P+ P Y+P P Y+P P + P+
Sbjct: 317 PEVTPSPPEITPYPSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPE 376
Query: 440 YSPS-AGYSPTLPGYSP 393
YSP Y P+ P Y+P
Sbjct: 377 YSPEPPSYVPSPPQYAP 393
Score = 55.5 bits (132), Expect = 4e-06
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -1
Query: 599 PSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAG 423
PS SP P Y P+ P Y+P PSY P+ P Y+P P Y+P P + + P+Y+P
Sbjct: 372 PSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGITPSPPEYAPEPP 431
Query: 422 YSP 414
P
Sbjct: 432 PGP 434
[236][TOP]
>UniRef100_B4MT78 GK20106 n=1 Tax=Drosophila willistoni RepID=B4MT78_DROWI
Length = 175
Score = 63.2 bits (152), Expect = 2e-08
Identities = 33/78 (42%), Positives = 46/78 (58%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAG 423
SP+ P SP +PT+P SPT+P SPT+P+ P+SPT SP++P + SP +
Sbjct: 28 SPTTPTTPPTSPTTPTTPPTSPTTPPTSPTTPTTPPTSPT-SPTTPTTPPTSPTTPTTPP 86
Query: 422 YSPTLPGYSPSSTGQYTP 369
SPT P + +T Q TP
Sbjct: 87 TSPTTPAETTPTTTQATP 104
Score = 60.5 bits (145), Expect = 1e-07
Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Frame = -1
Query: 590 ARLSPASPYSPTSPNYSPTSPSY---SPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGY 420
A+ +P SP +PT+P SPT+P+ SPT+P SP++PT P+SP +S +P P++
Sbjct: 22 AQGTPTSPTTPTTPPTSPTTPTTPPTSPTTPPTSPTTPTTPPTSP-TSPTTPTTPPTSPT 80
Query: 419 SPTLPGYSPSSTGQYTP 369
+PT P SP++ + TP
Sbjct: 81 TPTTPPTSPTTPAETTP 97
[237][TOP]
>UniRef100_B7Z2Y7 cDNA FLJ59521, moderately similar to Zinc finger and SCAN
domain-containing protein 2 n=1 Tax=Homo sapiens
RepID=B7Z2Y7_HUMAN
Length = 453
Score = 63.2 bits (152), Expect = 2e-08
Identities = 35/101 (34%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S + P + P SP + P SP + SP P SP ++P SP SP SP Y
Sbjct: 31 SPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRY 90
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKD 318
P S GY P PGY P S G + + T K S +
Sbjct: 91 EPQSPGYEPRSPGYEPRSPGYESESSRYESQNTELKTQSPE 131
Score = 54.7 bits (130), Expect = 6e-06
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 15/97 (15%)
Frame = -1
Query: 560 PTSPNYSPTSPSYSPTSPSYSPS--------------SPTYSPSSPYSSGASPDY-SPSA 426
P SP + P SP + P SP + P SP ++P SP S SP++ S S
Sbjct: 29 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 88
Query: 425 GYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDD 315
Y P PGY P S G Y P + ++ + ++ +
Sbjct: 89 RYEPQSPGYEPRSPG-YEPRSPGYESESSRYESQNTE 124
[238][TOP]
>UniRef100_B2RD90 cDNA, FLJ96507 n=1 Tax=Homo sapiens RepID=B2RD90_HUMAN
Length = 520
Score = 63.2 bits (152), Expect = 2e-08
Identities = 35/101 (34%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S + P + P SP + P SP + SP P SP ++P SP SP SP Y
Sbjct: 42 SPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRY 101
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKD 318
P S GY P PGY P S G + + T K S +
Sbjct: 102 EPQSPGYEPRSPGYEPRSPGYESESSRYESQNTELKTQSPE 142
Score = 54.7 bits (130), Expect = 6e-06
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 15/97 (15%)
Frame = -1
Query: 560 PTSPNYSPTSPSYSPTSPSYSPS--------------SPTYSPSSPYSSGASPDY-SPSA 426
P SP + P SP + P SP + P SP ++P SP S SP++ S S
Sbjct: 40 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 99
Query: 425 GYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDD 315
Y P PGY P S G Y P + ++ + ++ +
Sbjct: 100 RYEPQSPGYEPRSPG-YEPRSPGYESESSRYESQNTE 135
[239][TOP]
>UniRef100_Q9H5H4 Zinc finger protein 768 n=1 Tax=Homo sapiens RepID=ZN768_HUMAN
Length = 540
Score = 63.2 bits (152), Expect = 2e-08
Identities = 35/101 (34%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 438
S + P + P SP + P SP + SP P SP ++P SP SP SP Y
Sbjct: 62 SPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRY 121
Query: 437 SP-SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKD 318
P S GY P PGY P S G + + T K S +
Sbjct: 122 EPQSPGYEPRSPGYEPRSPGYESESSRYESQNTELKTQSPE 162
Score = 54.7 bits (130), Expect = 6e-06
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 15/97 (15%)
Frame = -1
Query: 560 PTSPNYSPTSPSYSPTSPSYSPS--------------SPTYSPSSPYSSGASPDY-SPSA 426
P SP + P SP + P SP + P SP ++P SP S SP++ S S
Sbjct: 60 PQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSP 119
Query: 425 GYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDD 315
Y P PGY P S G Y P + ++ + ++ +
Sbjct: 120 RYEPQSPGYEPRSPG-YEPRSPGYESESSRYESQNTE 155
[240][TOP]
>UniRef100_Q1WKU3 Putative RNA polymerase II 215 kD subunit (Fragment) n=1
Tax=Drosophila orena RepID=Q1WKU3_DROOR
Length = 750
Score = 62.8 bits (151), Expect = 2e-08
Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = -1
Query: 614 SIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYS 435
S ++SP++ SP+SP SP Y P SPS SPSYSP+SP Y+ SSP GASP+YS
Sbjct: 688 SPSWSPAHPGSSPSSPGPSMSP-YFPASPS---VSPSYSPTSPNYTASSP--GGASPNYS 741
Query: 434 PSA-GYSPT 411
PS+ YSPT
Sbjct: 742 PSSPNYSPT 750
Score = 55.1 bits (131), Expect = 5e-06
Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Frame = -1
Query: 608 AYSPSNARLSP--ASPYSPTSPNYSPTSPSYSPTSPSYSPS---------SPTYSPSSPY 462
A +P SP AS S SP++SP P SP+SP S S SP+YSP+SP
Sbjct: 668 AMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPN 727
Query: 461 SSGASPDYSPSAGYSPTLPGYSPS 390
+ +SP S YSP+ P YSP+
Sbjct: 728 YTASSPG-GASPNYSPSSPNYSPT 750
Score = 54.7 bits (130), Expect = 6e-06
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = -1
Query: 572 SPYSPTSPNYSPTSPS-YSPTSPSYSPSSPTYSPSSPYSS-----GASPDYSPSAGYSPT 411
S +P P++SP++ S S SPS+SP+ P SPSSP S ASP SPS YSPT
Sbjct: 667 SAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPS--YSPT 724
Query: 410 LPGYSPSSTGQYTPH 366
P Y+ SS G +P+
Sbjct: 725 SPNYTASSPGGASPN 739
[241][TOP]
>UniRef100_UPI000069ED41 UPI000069ED41 related cluster n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI000069ED41
Length = 403
Score = 62.0 bits (149), Expect = 4e-08
Identities = 41/88 (46%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Frame = -1
Query: 605 YSPSNARLSPA-SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGASP- 444
YSP + SP S YSP YSP YSP YSP YSP SP SG SP
Sbjct: 230 YSPLQSGYSPLQSVYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPL 289
Query: 443 --DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP +GYSP GYSP +G Y+P
Sbjct: 290 QSGYSPLQSGYSPLQSGYSPLQSG-YSP 316
Score = 60.8 bits (146), Expect = 9e-08
Identities = 42/95 (44%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Frame = -1
Query: 605 YSPSNARLSPA--------SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPY 462
YSPS + SP S YSP YSP YSP YSP YSP SP
Sbjct: 174 YSPSQSGYSPLQLVYSPLQSGYSPLQSGYSPLQSVYSPLQSGYSPLQSVYSPLQSGYSPL 233
Query: 461 SSGASP---DYSP-SAGYSPTLPGYSPSSTGQYTP 369
SG SP YSP +GYSP GYSP +G Y+P
Sbjct: 234 QSGYSPLQSVYSPLQSGYSPLQSGYSPLQSG-YSP 267
Score = 60.8 bits (146), Expect = 9e-08
Identities = 41/88 (46%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Frame = -1
Query: 605 YSPSNARLSPA-SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGASP- 444
YSP + SP S YSP YSP YSP YSP YSP SP SG SP
Sbjct: 216 YSPLQSVYSPLQSGYSPLQSGYSPLQSVYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPL 275
Query: 443 --DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP +GYSP GYSP +G Y+P
Sbjct: 276 QSGYSPLQSGYSPLQSGYSPLQSG-YSP 302
Score = 60.5 bits (145), Expect = 1e-07
Identities = 41/88 (46%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Frame = -1
Query: 605 YSPSNARLSPA-SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGASP- 444
YSP + SP S YSP YSP YSP YSP YSP SP SG SP
Sbjct: 83 YSPLQSVYSPLQSVYSPLQSGYSPLQSGYSPLQSGYSPLQSVYSPLQSVYSPLQSGYSPL 142
Query: 443 --DYSP-SAGYSPTLPGYSPSSTGQYTP 369
YSP +GYSP YSPS +G Y+P
Sbjct: 143 QLVYSPLQSGYSPLQSVYSPSQSG-YSP 169
Score = 59.3 bits (142), Expect = 2e-07
Identities = 40/90 (44%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Frame = -1
Query: 611 IAYSPSNARLSPA-SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGAS 447
+ YSP + SP S YSP+ YSP YSP+ YSP YSP SP SG S
Sbjct: 144 LVYSPLQSGYSPLQSVYSPSQSGYSPLQSVYSPSQSGYSPLQLVYSPLQSGYSPLQSGYS 203
Query: 446 P---DYSP-SAGYSPTLPGYSPSSTGQYTP 369
P YSP +GYSP YSP +G Y+P
Sbjct: 204 PLQSVYSPLQSGYSPLQSVYSPLQSG-YSP 232
Score = 59.3 bits (142), Expect = 2e-07
Identities = 41/95 (43%), Positives = 45/95 (47%), Gaps = 16/95 (16%)
Frame = -1
Query: 605 YSPSNARLSPA-SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP----SSPYSSGASP- 444
YSP + SP S YSP YSP YSP YSP YSP SP SG SP
Sbjct: 265 YSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPL 324
Query: 443 --DYSP--------SAGYSPTLPGYSPSSTGQYTP 369
YSP +GYSP GYSP +G Y+P
Sbjct: 325 QSGYSPLQSVYSPLQSGYSPLQSGYSPLQSG-YSP 358
Score = 57.4 bits (137), Expect = 9e-07
Identities = 37/81 (45%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPA-SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP + SP S YSP YSP YSP YSP YSP S YSPS
Sbjct: 104 YSPLQSGYSPLQSGYSPLQSVYSPLQSVYSPLQSGYSPLQLVYSPLQSGYSPLQSVYSPS 163
Query: 428 -AGYSPTLPGYSPSSTGQYTP 369
+GYSP YSPS +G Y+P
Sbjct: 164 QSGYSPLQSVYSPSQSG-YSP 183
Score = 57.4 bits (137), Expect = 9e-07
Identities = 37/81 (45%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = -1
Query: 605 YSPSNARLSPA-SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
YSP + SP S YSP YSP YSP YSP YSPS S YSPS
Sbjct: 118 YSPLQSVYSPLQSVYSPLQSGYSPLQLVYSPLQSGYSPLQSVYSPSQSGYSPLQSVYSPS 177
Query: 428 -AGYSPTLPGYSPSSTGQYTP 369
+GYSP YSP +G Y+P
Sbjct: 178 QSGYSPLQLVYSPLQSG-YSP 197
Score = 54.7 bits (130), Expect = 6e-06
Identities = 32/73 (43%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -1
Query: 605 YSPSNARLSPAS-PYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
YSP + SP YSP YSP YSP YSP YSP S YSP
Sbjct: 48 YSPLQSVYSPLQLVYSPLQSGYSPLQLVYSPLQSGYSPLQSVYSPLQSVYSPLQSGYSPL 107
Query: 431 SAGYSPTLPGYSP 393
+GYSP GYSP
Sbjct: 108 QSGYSPLQSGYSP 120
[242][TOP]
>UniRef100_UPI00015B4E97 PREDICTED: similar to conserved hypothetical protein n=1
Tax=Nasonia vitripennis RepID=UPI00015B4E97
Length = 1089
Score = 61.6 bits (148), Expect = 5e-08
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Frame = -1
Query: 599 PSNARLSPASPYS-PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAG 423
P++ PASP S P SP P SP+ P SP+ P+SPT P+SP S ASP P++
Sbjct: 85 PASPTSGPASPPSGPASPTSGPASPASGPASPTSGPASPTSGPASPASGPASPASGPASP 144
Query: 422 YS-PTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDKGNP 303
S P P +P+S + P K ++D D G+P
Sbjct: 145 ASGPASPSSAPASPEEAYPKSAGSSPKFQERD--YDIPGSP 183
Score = 57.8 bits (138), Expect = 7e-07
Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Frame = -1
Query: 599 PSNARLSPASPYS--PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA 426
P+++ PASP S P SP P SP+ P SP P+SPT P+SP S ASP P++
Sbjct: 49 PASSASGPASPASGPPASPPSGPASPTSDPASPVSGPASPTSGPASPPSGPASPTSGPAS 108
Query: 425 GYS-PTLPGYSPSS--TGQYTPHEGDKKDKTG 339
S P P P+S +G +P G +G
Sbjct: 109 PASGPASPTSGPASPTSGPASPASGPASPASG 140
Score = 54.7 bits (130), Expect = 6e-06
Identities = 36/89 (40%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Frame = -1
Query: 578 PASPYSPTS----PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPT 411
P+ P SPTS P P SP+ P SP P+SPT P+SP S ASP P+ SPT
Sbjct: 68 PSGPASPTSDPASPVSGPASPTSGPASPPSGPASPTSGPASPASGPASPTSGPA---SPT 124
Query: 410 LPGYSPSSTGQYTPHEGDKKDKTGKKDAS 324
SP+S G +P G +G S
Sbjct: 125 SGPASPAS-GPASPASGPASPASGPASPS 152
[243][TOP]
>UniRef100_UPI0000E241DC PREDICTED: hypothetical protein n=1 Tax=Pan troglodytes
RepID=UPI0000E241DC
Length = 1156
Score = 61.6 bits (148), Expect = 5e-08
Identities = 34/98 (34%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 432
+ P + R P SP + SP P SP ++P SP SP + SP SP Y P
Sbjct: 681 FEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPR 740
Query: 431 SAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKD 318
S GY P PGY P S G + + T K S +
Sbjct: 741 SPGYEPRSPGYEPRSPGYESESSRYESQNTELKTQSPE 778
[244][TOP]
>UniRef100_B8BEN2 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8BEN2_ORYSI
Length = 519
Score = 61.6 bits (148), Expect = 5e-08
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = -1
Query: 608 AYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP 432
+Y PS P+ P Y+P P Y+P P P+ P YSP P+Y PS P + P Y P
Sbjct: 304 SYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVP 363
Query: 431 SAG-YSPTLPGYSPSSTGQYTP 369
S Y+P PG +PS +Y P
Sbjct: 364 SPPVYAPYPPGITPSPP-EYAP 384
Score = 60.8 bits (146), Expect = 9e-08
Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = -1
Query: 617 PSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
P I PS + P+ P Y P+ P+Y P+ P Y+P P Y+P P PS P S P
Sbjct: 287 PEITPYPSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPS 346
Query: 440 YSPS-AGYSPTLPGYSPS 390
Y PS Y+P P Y PS
Sbjct: 347 YVPSPPQYAPQPPSYVPS 364
Score = 60.5 bits (145), Expect = 1e-07
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = -1
Query: 617 PSIAYSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
P + SP P+ P P+ P+Y P+ PSY P+ P Y+P P Y+P P + P+
Sbjct: 280 PEVTPSPPEITPYPSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSPPE 339
Query: 440 YSPS-AGYSPTLPGYSP 393
YSP Y P+ P Y+P
Sbjct: 340 YSPEPPSYVPSPPQYAP 356
Score = 60.1 bits (144), Expect = 1e-07
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = -1
Query: 617 PSIAYSPSNARLSPASPYS---PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
P I PS ++P+ P P+ P P+ PSY P+ PSY PS P Y+P P +
Sbjct: 271 PEITPYPSPPEVTPSPPEITPYPSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYP 330
Query: 446 PDYSPS-AGYSPTLPGYSPSSTGQYTP 369
P PS YSP P Y PS QY P
Sbjct: 331 PGIFPSPPEYSPEPPSYVPSPP-QYAP 356
Score = 59.3 bits (142), Expect = 2e-07
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = -1
Query: 605 YSPSNARLSPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
Y+P + P+ P YSP P+Y P+ P Y+P PSY PS P Y+P P + + P+Y+P
Sbjct: 326 YAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPVYAPYPPGITPSPPEYAPE 385
Query: 428 AGYSPTLPGYSPSSTGQYTP 369
P P G Y P
Sbjct: 386 PPPGP------PGGGGGYLP 399
[245][TOP]
>UniRef100_C6ZIW1 RNA polymerase II (Fragment) n=1 Tax=Plasmodium ovale
RepID=C6ZIW1_9APIC
Length = 168
Score = 61.6 bits (148), Expect = 5e-08
Identities = 45/120 (37%), Positives = 56/120 (46%), Gaps = 22/120 (18%)
Frame = -1
Query: 596 SNARLSPASP-YSPTSPNYSPTSPSYSPTSP--------------SYSPSSPTYSPSSPY 462
+N + + SP YS TSP YSPTSP YSPTSP YS +SP +SP+SP
Sbjct: 39 TNMKYNVMSPVYSVTSPKYSPTSPQYSPTSPVPNNPSSPHSPHYSPYSITSPKFSPTSPA 98
Query: 461 SSGASPDYSPSAGYS--PTLPGYSPSSTGQYTPHEGDKK-----DKTGKKDASKDDKGNP 303
S +SP Y +A + P P Y S Q H D + DA DD +P
Sbjct: 99 YSISSPVYDKNAPINKHPLSPAYILQSPVQVKQHIQDVHMFSPIQQANANDAQNDDPFSP 158
Score = 57.4 bits (137), Expect = 9e-07
Identities = 43/103 (41%), Positives = 46/103 (44%), Gaps = 43/103 (41%)
Frame = -1
Query: 566 YSPTSPN----------------YSPTSPS-------------------YSPTSPSYSPS 492
YSPTSP YSPTSP YS TSP YSP+
Sbjct: 1 YSPTSPTYNASHANQANQANTAYYSPTSPKNHITGDVHTNMKYNVMSPVYSVTSPKYSPT 60
Query: 491 SPTYSPSSPY----SSGASPDYSP----SAGYSPTLPGYSPSS 387
SP YSP+SP SS SP YSP S +SPT P YS SS
Sbjct: 61 SPQYSPTSPVPNNPSSPHSPHYSPYSITSPKFSPTSPAYSISS 103
[246][TOP]
>UniRef100_UPI0000E472F6 PREDICTED: similar to myosin light chain kinase n=1
Tax=Strongylocentrotus purpuratus RepID=UPI0000E472F6
Length = 1627
Score = 61.2 bits (147), Expect = 7e-08
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSP--NYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGAS 447
SPS YSPS R S Y P+SP Y P+SP+Y SP+Y P+SPTY PSSPY S A+
Sbjct: 835 SPSSRYSPS--RPHTPSTYRPSSPMGTYRPSSPTYRSPSPAYRPASPTYRPSSPYHSYAT 892
Score = 55.1 bits (131), Expect = 5e-06
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = -1
Query: 620 SPSIAYSPSNAR-LSPASPYSPTSPNYSPTSPSYSPTSP--SYSPSSPTYSPSSPYSSGA 450
S S ++SP++ LSP+S YSP+ P+ T +Y P+SP +Y PSSPTY SP A
Sbjct: 821 SRSRSFSPTSPTGLSPSSRYSPSRPH---TPSTYRPSSPMGTYRPSSPTYRSPSPAYRPA 877
Query: 449 SPDYSPSAGY 420
SP Y PS+ Y
Sbjct: 878 SPTYRPSSPY 887
[247][TOP]
>UniRef100_UPI000069F8DC UPI000069F8DC related cluster n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI000069F8DC
Length = 171
Score = 61.2 bits (147), Expect = 7e-08
Identities = 32/70 (45%), Positives = 44/70 (62%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAG 423
SPS SP++P SP++P SP++P SP++P SPS+P SPS+P S ++P SPSA
Sbjct: 35 SPSAPPPSPSAPSSPSAPPPSPSAPPPSPSAPPPSPSAPPPSPSAPPPSPSAPPPSPSAP 94
Query: 422 YSPTLPGYSP 393
P P P
Sbjct: 95 SQPLCPPSQP 104
Score = 55.1 bits (131), Expect = 5e-06
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPS--YSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
SPS SP++P P SP+ P SPS SP++P SPS+P SPS+P S ++P SPS
Sbjct: 21 SPSAPPPSPSAP--PPSPSAPPPSPSAPSSPSAPPPSPSAPPPSPSAPPPSPSAPPPSPS 78
Query: 428 A-GYSPTLPGYSPSSTGQ 378
A SP+ P SPS+ Q
Sbjct: 79 APPPSPSAPPPSPSAPSQ 96
[248][TOP]
>UniRef100_UPI0001B7BF92 zinc finger protein 768 n=1 Tax=Rattus norvegicus
RepID=UPI0001B7BF92
Length = 570
Score = 61.2 bits (147), Expect = 7e-08
Identities = 33/87 (37%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Frame = -1
Query: 617 PSIAYSPSNARLSPASP--------YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY 462
PS ++P + P SP Y P SP Y P SP Y P SP Y P SP Y SP
Sbjct: 98 PSPEFAPRSPESDPQSPEFESQSSRYEPQSPGYDPKSPGYEPGSPRYEPKSPGYGSKSPE 157
Query: 461 SSGASPDYSPSAGYSPTLPGYSPSSTG 381
SP G PGY P ++G
Sbjct: 158 FESQSP------GCESQSPGYEPQNSG 178
Score = 54.7 bits (130), Expect = 6e-06
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = -1
Query: 602 SPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SA 426
S S + P+ ++P SP P SP + S Y P SP Y P SP SP Y P S
Sbjct: 90 SRSPGFVPPSPEFAPRSPESDPQSPEFESQSSRYEPQSPGYDPKSPGYEPGSPRYEPKSP 149
Query: 425 GYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDASKDDK 312
GY P + S G + G + +G + + + K
Sbjct: 150 GYGSKSPEFESQSPGCESQSPGYEPQNSGDEVRNSEFK 187
[249][TOP]
>UniRef100_UPI000179248D PREDICTED: similar to RR2 cuticle protein 3 n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179248D
Length = 299
Score = 60.8 bits (146), Expect = 9e-08
Identities = 33/80 (41%), Positives = 52/80 (65%)
Frame = -1
Query: 608 AYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
+Y ++ +P++P +P++P+YSP +PSYSP +P YSP +P+YSP+ Y +P YSP+
Sbjct: 26 SYPSPSSPSAPSAPSAPSAPSYSP-APSYSP-APLYSP-APSYSPAPAYK--PAPSYSPA 80
Query: 428 AGYSPTLPGYSPSSTGQYTP 369
YSP P Y P+ + P
Sbjct: 81 PSYSPA-PAYKPAPAYKPAP 99
Score = 60.1 bits (144), Expect = 1e-07
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
+PS +PS SPA YSP +P YSP +PSYSP +P+Y P+ P+YSP+ YS +P
Sbjct: 35 APSAPSAPSAPSYSPAPSYSP-APLYSP-APSYSP-APAYKPA-PSYSPAPSYSP--APA 88
Query: 440 YSPSAGYSPTLPGYSPS 390
Y P+ Y P P Y PS
Sbjct: 89 YKPAPAYKPA-PSYKPS 104
[250][TOP]
>UniRef100_C4WTF5 ACYPI006712 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WTF5_ACYPI
Length = 304
Score = 60.8 bits (146), Expect = 9e-08
Identities = 33/80 (41%), Positives = 52/80 (65%)
Frame = -1
Query: 608 AYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPS 429
+Y ++ +P++P +P++P+YSP +PSYSP +P YSP +P+YSP+ Y +P YSP+
Sbjct: 26 SYPSPSSPSAPSAPSAPSAPSYSP-APSYSP-APLYSP-APSYSPAPAYK--PAPSYSPA 80
Query: 428 AGYSPTLPGYSPSSTGQYTP 369
YSP P Y P+ + P
Sbjct: 81 PSYSPA-PAYKPAPAYKPAP 99
Score = 60.1 bits (144), Expect = 1e-07
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = -1
Query: 620 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 441
+PS +PS SPA YSP +P YSP +PSYSP +P+Y P+ P+YSP+ YS +P
Sbjct: 35 APSAPSAPSAPSYSPAPSYSP-APLYSP-APSYSP-APAYKPA-PSYSPAPSYSP--APA 88
Query: 440 YSPSAGYSPTLPGYSPS 390
Y P+ Y P P Y PS
Sbjct: 89 YKPAPAYKPA-PSYKPS 104