[UP]
[1][TOP]
>UniRef100_Q8L7S8 DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Arabidopsis thaliana
RepID=RH3_ARATH
Length = 748
Score = 143 bits (361), Expect = 1e-32
Identities = 67/67 (100%), Positives = 67/67 (100%)
Frame = -2
Query: 620 SRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATD 441
SRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATD
Sbjct: 682 SRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATD 741
Query: 440 CPDKRGF 420
CPDKRGF
Sbjct: 742 CPDKRGF 748
[2][TOP]
>UniRef100_Q8L7S8-2 Isoform 2 of DEAD-box ATP-dependent RNA helicase 3 n=1
Tax=Arabidopsis thaliana RepID=Q8L7S8-2
Length = 747
Score = 137 bits (344), Expect = 9e-31
Identities = 66/67 (98%), Positives = 66/67 (98%)
Frame = -2
Query: 620 SRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATD 441
SRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRE SFGGSCFICGKSGHRATD
Sbjct: 682 SRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRE-SFGGSCFICGKSGHRATD 740
Query: 440 CPDKRGF 420
CPDKRGF
Sbjct: 741 CPDKRGF 747
[3][TOP]
>UniRef100_B9N3Z4 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Z4_POPTR
Length = 775
Score = 86.3 bits (212), Expect = 2e-15
Identities = 44/77 (57%), Positives = 52/77 (67%), Gaps = 10/77 (12%)
Frame = -2
Query: 620 SRRSSGGGSSWSRGGSS----------SRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFI 471
S R S G ++ RGG S SR S DDWLIGGR SS R PSR+RSFGGSCF
Sbjct: 701 SGRDSDDGGTYRRGGRSNSNENSWSQMSRSSGDDWLIGGRRSS--RPPSRDRSFGGSCFN 758
Query: 470 CGKSGHRATDCPDKRGF 420
CG+SGHRA++CP+K+ F
Sbjct: 759 CGRSGHRASECPNKKDF 775
[4][TOP]
>UniRef100_A9PJW0 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJW0_9ROSI
Length = 481
Score = 86.3 bits (212), Expect = 2e-15
Identities = 44/77 (57%), Positives = 52/77 (67%), Gaps = 10/77 (12%)
Frame = -2
Query: 620 SRRSSGGGSSWSRGGSS----------SRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFI 471
S R S G ++ RGG S SR S DDWLIGGR SS R PSR+RSFGGSCF
Sbjct: 407 SGRDSDDGGTYRRGGRSNSNENSWSQMSRSSGDDWLIGGRRSS--RPPSRDRSFGGSCFN 464
Query: 470 CGKSGHRATDCPDKRGF 420
CG+SGHRA++CP+K+ F
Sbjct: 465 CGRSGHRASECPNKKDF 481
[5][TOP]
>UniRef100_UPI0001984A30 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984A30
Length = 764
Score = 82.4 bits (202), Expect = 3e-14
Identities = 48/90 (53%), Positives = 53/90 (58%), Gaps = 23/90 (25%)
Frame = -2
Query: 620 SRRSSGGGSSWS-----------RGGSSSRG----------SSDDWLIGGRSS--SSSRA 510
SR S G GSSW RGG S R S DDWLIGGR S SSS
Sbjct: 675 SRISRGRGSSWGSDDDGGDDLNRRGGRSFRSNNNWSRNLRTSEDDWLIGGRRSNRSSSSF 734
Query: 509 PSRERSFGGSCFICGKSGHRATDCPDKRGF 420
SRERSFGGSCF CG+SGHRA++CP+KR +
Sbjct: 735 GSRERSFGGSCFTCGRSGHRASECPNKRDY 764
[6][TOP]
>UniRef100_Q2HUZ8 Helicase, C-terminal; Zinc finger, CCHC-type; GUCT n=1 Tax=Medicago
truncatula RepID=Q2HUZ8_MEDTR
Length = 753
Score = 79.7 bits (195), Expect = 2e-13
Identities = 40/64 (62%), Positives = 47/64 (73%)
Frame = -2
Query: 614 RSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATDCP 435
RS G+SWS+ SSR DDWLIGGR SS S + S RSF G+CF CG+SGHRA+DCP
Sbjct: 691 RSYKSGNSWSKPERSSR---DDWLIGGRQSSRSSS-SPNRSFAGTCFTCGESGHRASDCP 746
Query: 434 DKRG 423
+KRG
Sbjct: 747 NKRG 750
[7][TOP]
>UniRef100_A7PRF1 Chromosome chr14 scaffold_27, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PRF1_VITVI
Length = 762
Score = 76.3 bits (186), Expect = 2e-12
Identities = 48/95 (50%), Positives = 53/95 (55%), Gaps = 28/95 (29%)
Frame = -2
Query: 620 SRRSSGGGSSWS-----------RGGSSSRG----------SSDDWLIGGRSS--SSSRA 510
SR S G GSSW RGG S R S DDWLIGGR S SSS
Sbjct: 668 SRISRGRGSSWGSDDDGGDDLNRRGGRSFRSNNNWSRNLRTSEDDWLIGGRRSNRSSSSF 727
Query: 509 PSRER-----SFGGSCFICGKSGHRATDCPDKRGF 420
SRER SFGGSCF CG+SGHRA++CP+KR +
Sbjct: 728 GSRERCYYDRSFGGSCFTCGRSGHRASECPNKRDY 762
[8][TOP]
>UniRef100_B9RFT3 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus
communis RepID=B9RFT3_RICCO
Length = 772
Score = 74.7 bits (182), Expect = 6e-12
Identities = 41/83 (49%), Positives = 48/83 (57%), Gaps = 17/83 (20%)
Frame = -2
Query: 617 RRSSGGGSSWSRGGSS-SRGSSDDWLIGGRSSSS----------------SRAPSRERSF 489
R S ++ RGG S SR SSDDWLIGG SS R+ R+RSF
Sbjct: 690 RNSDDDDDTFRRGGRSFSRSSSDDWLIGGGRSSRPSPRGRSSPRDWSSPRDRSSPRDRSF 749
Query: 488 GGSCFICGKSGHRATDCPDKRGF 420
GGSCF CG+SGHRA+DCP+K F
Sbjct: 750 GGSCFNCGRSGHRASDCPNKLDF 772
[9][TOP]
>UniRef100_B9N3Y9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Y9_POPTR
Length = 735
Score = 69.3 bits (168), Expect = 2e-10
Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = -2
Query: 620 SRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRE-RSFGGSCFICGKSGHRAT 444
+RR S+ + SR S DDWL+GGR SS R SR+ RSFGGSCF CG+SGHRA+
Sbjct: 674 NRRGGRSNSNENTRSWMSRSSGDDWLVGGRRSS--RPSSRDSRSFGGSCFNCGRSGHRAS 731
Query: 443 DCPD 432
+CP+
Sbjct: 732 ECPN 735
[10][TOP]
>UniRef100_Q6L724 ATP-dependent RNA helicase n=1 Tax=Hordeum vulgare
RepID=Q6L724_HORVU
Length = 764
Score = 63.5 bits (153), Expect = 1e-08
Identities = 38/70 (54%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Frame = -2
Query: 620 SRRSSGGGSSWS-RGGSSSRGSSDDWLIGGRSSS-----SSRAPSRERSFGGSCFICGKS 459
S SGG SS+ RGGSSS G G RSSS S SR+RSF G+CF CG+S
Sbjct: 696 SSSPSGGRSSYGGRGGSSSFGDRSS-SFGERSSSYGGRGGSSFGSRDRSFSGACFTCGQS 754
Query: 458 GHRATDCPDK 429
GHRA+DCP+K
Sbjct: 755 GHRASDCPNK 764
[11][TOP]
>UniRef100_B6SSK6 Nucleolar RNA helicase 2 n=1 Tax=Zea mays RepID=B6SSK6_MAIZE
Length = 744
Score = 60.8 bits (146), Expect = 9e-08
Identities = 37/64 (57%), Positives = 40/64 (62%)
Frame = -2
Query: 620 SRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATD 441
S RSS GS S SSRGS GGRSSS S RSF G+CF CG+SGHRATD
Sbjct: 686 SNRSSSFGSR-SSSSYSSRGSPS---FGGRSSSFGSRESN-RSFSGACFNCGESGHRATD 740
Query: 440 CPDK 429
CP+K
Sbjct: 741 CPNK 744
[12][TOP]
>UniRef100_B4FA24 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FA24_MAIZE
Length = 598
Score = 60.5 bits (145), Expect = 1e-07
Identities = 41/107 (38%), Positives = 48/107 (44%), Gaps = 43/107 (40%)
Frame = -2
Query: 620 SRRSSGGGSSWSRGGSSSRG------------------SSDDWLIGGRSS---------- 525
+RRS GGG+S RGG + G S DDW GGR S
Sbjct: 492 NRRSRGGGASRGRGGWDTDGEDRFRRGGRSLRSDNDSWSDDDWSGGGRKSNRSSSFGSRS 551
Query: 524 ---SSSRAPS------------RERSFGGSCFICGKSGHRATDCPDK 429
SS +PS RSF G+CF CG+SGHRATDCP+K
Sbjct: 552 SSYSSRGSPSFGGRSSSFGGRESNRSFSGACFNCGESGHRATDCPNK 598
[13][TOP]
>UniRef100_B7EBF8 cDNA clone:J013043E01, full insert sequence n=3 Tax=Oryza sativa
Japonica Group RepID=B7EBF8_ORYSJ
Length = 597
Score = 59.7 bits (143), Expect = 2e-07
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = -2
Query: 617 RRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATDC 438
RRS+ S RG SS GS GGRSSS S RSF G+CF CG+SGHRA+DC
Sbjct: 538 RRSNRSSSFGGRG--SSYGSRSSSSFGGRSSSFGSRDS-SRSFSGACFNCGESGHRASDC 594
Query: 437 PDK 429
P+K
Sbjct: 595 PNK 597
[14][TOP]
>UniRef100_B9F737 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9F737_ORYSJ
Length = 697
Score = 59.7 bits (143), Expect = 2e-07
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = -2
Query: 617 RRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATDC 438
RRS+ S RG SS GS GGRSSS S RSF G+CF CG+SGHRA+DC
Sbjct: 638 RRSNRSSSFGGRG--SSYGSRSSSSFGGRSSSFGSRDS-SRSFSGACFNCGESGHRASDC 694
Query: 437 PDK 429
P+K
Sbjct: 695 PNK 697
[15][TOP]
>UniRef100_B8AMQ6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AMQ6_ORYSI
Length = 779
Score = 59.7 bits (143), Expect = 2e-07
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = -2
Query: 617 RRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATDC 438
RRS+ S RG SS GS GGRSSS S RSF G+CF CG+SGHRA+DC
Sbjct: 720 RRSNRSSSFGGRG--SSYGSRSSSSFGGRSSSFGSRDS-SRSFSGACFNCGESGHRASDC 776
Query: 437 PDK 429
P+K
Sbjct: 777 PNK 779
[16][TOP]
>UniRef100_A6N0F8 Nucleolar RNA helicase 2 (Fragment) n=1 Tax=Oryza sativa Indica
Group RepID=A6N0F8_ORYSI
Length = 60
Score = 59.7 bits (143), Expect = 2e-07
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = -2
Query: 617 RRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATDC 438
RRS+ S RG SS GS GGRSSS S RSF G+CF CG+SGHRA+DC
Sbjct: 1 RRSNRSSSFGGRG--SSYGSRSSSSFGGRSSSFGSRDS-SRSFSGACFNCGESGHRASDC 57
Query: 437 PDK 429
P+K
Sbjct: 58 PNK 60
[17][TOP]
>UniRef100_Q0DM51 DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Oryza sativa Japonica
Group RepID=RH3_ORYSJ
Length = 758
Score = 59.7 bits (143), Expect = 2e-07
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = -2
Query: 617 RRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATDC 438
RRS+ S RG SS GS GGRSSS S RSF G+CF CG+SGHRA+DC
Sbjct: 699 RRSNRSSSFGGRG--SSYGSRSSSSFGGRSSSFGSRDS-SRSFSGACFNCGESGHRASDC 755
Query: 437 PDK 429
P+K
Sbjct: 756 PNK 758
[18][TOP]
>UniRef100_Q0DM51-3 Isoform 3 of DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Oryza
sativa Japonica Group RepID=Q0DM51-3
Length = 757
Score = 59.3 bits (142), Expect = 2e-07
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = -2
Query: 617 RRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATDC 438
RRS+ S RG SS GS GGRSSS SR SF G+CF CG+SGHRA+DC
Sbjct: 699 RRSNRSSSFGGRG--SSYGSRSSSSFGGRSSSFGSRDSR--SFSGACFNCGESGHRASDC 754
Query: 437 PDK 429
P+K
Sbjct: 755 PNK 757
[19][TOP]
>UniRef100_B4FFB7 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FFB7_MAIZE
Length = 148
Score = 57.0 bits (136), Expect = 1e-06
Identities = 36/80 (45%), Positives = 41/80 (51%), Gaps = 16/80 (20%)
Frame = -2
Query: 620 SRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSS--------------SSRAPSRE--RSF 489
S S WS GG S SS + GGRSSS SS RE RSF
Sbjct: 71 SDNDSWSDDDWSGGGRKSNRSSSSF--GGRSSSYGSRGSPSPSFGVRSSSLGGRESSRSF 128
Query: 488 GGSCFICGKSGHRATDCPDK 429
G+CF CG+SGHRA+DCP+K
Sbjct: 129 SGACFNCGESGHRASDCPNK 148
[20][TOP]
>UniRef100_Q2PEW4 Putative uncharacterized protein (Fragment) n=1 Tax=Trifolium
pratense RepID=Q2PEW4_TRIPR
Length = 402
Score = 54.7 bits (130), Expect = 6e-06
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = -2
Query: 611 SSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATDCPD 432
SS SS +R SS+R SS + G SSS+ +P ++ G CF CG+SGHRA DCP+
Sbjct: 342 SSNRSSSPNRYSSSNRSSSSN----GYSSSNRSSPPNRGNYRGPCFNCGQSGHRALDCPN 397
Query: 431 K 429
K
Sbjct: 398 K 398