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[1][TOP]
>UniRef100_Q9M1J2 Putative uncharacterized protein F24I3.160 n=1 Tax=Arabidopsis
thaliana RepID=Q9M1J2_ARATH
Length = 222
Score = 227 bits (579), Expect = 3e-58
Identities = 115/121 (95%), Positives = 119/121 (98%)
Frame = -1
Query: 469 SVVADILSQETISGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQ 290
SVVADILSQETI+GLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNIT+HSLKPQHQ
Sbjct: 102 SVVADILSQETITGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITKHSLKPQHQ 161
Query: 289 VLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
VLNDE+ TLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGEL+ESHVAFRCV
Sbjct: 162 VLNDEEKTTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELTESHVAFRCV 221
Query: 109 W 107
W
Sbjct: 222 W 222
[2][TOP]
>UniRef100_Q8L947 Putative DNA-directed RNA polymerase 23kD subunit n=1
Tax=Arabidopsis thaliana RepID=Q8L947_ARATH
Length = 222
Score = 227 bits (579), Expect = 3e-58
Identities = 115/121 (95%), Positives = 119/121 (98%)
Frame = -1
Query: 469 SVVADILSQETISGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQ 290
SVVADILSQETI+GLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNIT+HSLKPQHQ
Sbjct: 102 SVVADILSQETITGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITKHSLKPQHQ 161
Query: 289 VLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
VLNDE+ TLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGEL+ESHVAFRCV
Sbjct: 162 VLNDEEKTTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELTESHVAFRCV 221
Query: 109 W 107
W
Sbjct: 222 W 222
[3][TOP]
>UniRef100_Q9ZVB9 Putative DNA-directed RNA polymerase 23kD subunit n=1
Tax=Arabidopsis thaliana RepID=Q9ZVB9_ARATH
Length = 218
Score = 185 bits (470), Expect = 1e-45
Identities = 87/119 (73%), Positives = 108/119 (90%)
Frame = -1
Query: 466 VVADILSQETISGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQV 287
+ AD+LS+E I+GLILVLQ+H+TNQALKA+ELFSFKVE+F+ITDLLVN+++H L+P+HQV
Sbjct: 99 IAADVLSRENITGLILVLQSHITNQALKAVELFSFKVELFEITDLLVNVSKHVLRPKHQV 158
Query: 286 LNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
LND++ +LLKKFSIEEKQLPR+S KD IVRYYGLE GQV+KV Y+ ELSESHV +RCV
Sbjct: 159 LNDKEKESLLKKFSIEEKQLPRLSSKDPIVRYYGLETGQVMKVTYKDELSESHVTYRCV 217
[4][TOP]
>UniRef100_B9ST46 DNA-directed RNA polymerase II, putative n=1 Tax=Ricinus communis
RepID=B9ST46_RICCO
Length = 238
Score = 175 bits (443), Expect = 2e-42
Identities = 80/121 (66%), Positives = 103/121 (85%)
Frame = -1
Query: 469 SVVADILSQETISGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQ 290
++ I+++++++GLILVLQN +TNQA+KA++LF FKVE+FQITDLLVNIT+H LKP+HQ
Sbjct: 118 AIAGQIVNKDSLTGLILVLQNQITNQAMKAVDLFKFKVEMFQITDLLVNITKHVLKPKHQ 177
Query: 289 VLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
VL D + LLK + IEEKQLPR+ +KDAI RYYGLEKGQVVKV Y GE++ESHV +RCV
Sbjct: 178 VLTDREKQKLLKDYCIEEKQLPRLLRKDAIARYYGLEKGQVVKVTYSGEITESHVTYRCV 237
Query: 109 W 107
W
Sbjct: 238 W 238
[5][TOP]
>UniRef100_C6SXN9 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SXN9_SOYBN
Length = 237
Score = 171 bits (434), Expect = 2e-41
Identities = 78/121 (64%), Positives = 103/121 (85%)
Frame = -1
Query: 469 SVVADILSQETISGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQ 290
+ I++++T++GLIL+++NH+T+QALKA+ LFSFKVEIFQITDLLVNIT+H LKP+HQ
Sbjct: 117 NTAGQIINRDTLTGLILIVENHITSQALKAVNLFSFKVEIFQITDLLVNITKHVLKPKHQ 176
Query: 289 VLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
VL D+ LLKK++IEEKQLPR+ + DAI RYYGLE+GQVVKV Y GE+++ HV +RCV
Sbjct: 177 VLTDKQKINLLKKYNIEEKQLPRMLQTDAIARYYGLERGQVVKVTYSGEVTQMHVTYRCV 236
Query: 109 W 107
W
Sbjct: 237 W 237
[6][TOP]
>UniRef100_B9IHS9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IHS9_POPTR
Length = 216
Score = 171 bits (434), Expect = 2e-41
Identities = 79/120 (65%), Positives = 103/120 (85%)
Frame = -1
Query: 466 VVADILSQETISGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQV 287
+ I +++++GLILVLQN++TNQA+KA++LF FK+EIFQITDLLVNIT+H LKP+HQV
Sbjct: 97 ITVQITDRDSLTGLILVLQNNITNQAMKALDLFKFKIEIFQITDLLVNITKHILKPKHQV 156
Query: 286 LNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCVW 107
L+++ LLKK+SIEEKQLPR+ KKDAI RYYGLE+GQVVKV Y G+++ SHV +RCVW
Sbjct: 157 LSEQAKQRLLKKYSIEEKQLPRLLKKDAISRYYGLERGQVVKVTYDGDITGSHVTYRCVW 216
[7][TOP]
>UniRef100_A7QJL2 Chromosome chr8 scaffold_106, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QJL2_VITVI
Length = 229
Score = 169 bits (428), Expect = 9e-41
Identities = 79/121 (65%), Positives = 104/121 (85%)
Frame = -1
Query: 469 SVVADILSQETISGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQ 290
S+ I++++++S LILVLQNH+T+QALKA++LFSF+VE FQITDLLVNIT+H LKP+H+
Sbjct: 109 SIATQIVNKDSLSKLILVLQNHITSQALKAVDLFSFQVEKFQITDLLVNITKHVLKPKHR 168
Query: 289 VLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
VL D++ LLKK+S+ EKQLPR+ ++DAI RYYGLEKGQVVKV Y GE++ SHV +RCV
Sbjct: 169 VLTDQEKNKLLKKYSLNEKQLPRMLQQDAIARYYGLEKGQVVKVIYNGEITGSHVTYRCV 228
Query: 109 W 107
W
Sbjct: 229 W 229
[8][TOP]
>UniRef100_Q9LKX4 RPB5d n=1 Tax=Brassica napus RepID=Q9LKX4_BRANA
Length = 223
Score = 167 bits (422), Expect = 4e-40
Identities = 77/121 (63%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
Frame = -1
Query: 466 VVADILSQETISGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQV 287
+ AD+L +E ++GLILVLQ+ +TNQALKA+ELFSFKVE+FQ+T+LLVNIT+H L+P+H V
Sbjct: 103 IAADVLGRENLTGLILVLQSDITNQALKAVELFSFKVELFQLTELLVNITKHVLRPKHHV 162
Query: 286 LNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSES-HVAFRCV 110
LN+++ +L KKFSI+E+QLP++ KKD +YYGLEKGQVV+V Y+GE SES HV++RC
Sbjct: 163 LNEQEKESLFKKFSIQEQQLPKLLKKDPTAKYYGLEKGQVVEVTYKGEGSESDHVSYRCA 222
Query: 109 W 107
W
Sbjct: 223 W 223
[9][TOP]
>UniRef100_A2Q2Z5 RNA polymerase subunit, RPB5; RNA polymerase Rpb5, N-terminal n=1
Tax=Medicago truncatula RepID=A2Q2Z5_MEDTR
Length = 248
Score = 164 bits (414), Expect = 4e-39
Identities = 74/120 (61%), Positives = 99/120 (82%)
Frame = -1
Query: 466 VVADILSQETISGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQV 287
+ I+++E+++GLIL++QN +T+QALKA+ L SFKVEIFQITDLLVN T+H LKP+HQV
Sbjct: 129 IAGQIVNRESLTGLILIVQNQITSQALKAVNLLSFKVEIFQITDLLVNATKHVLKPKHQV 188
Query: 286 LNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCVW 107
L D+ LLKK+ I+EKQLPR+ + DAI RYYGL++GQVVKV Y GE+++ HV +RCVW
Sbjct: 189 LTDKQKKNLLKKYDIQEKQLPRMLQTDAIARYYGLQRGQVVKVTYTGEITQMHVTYRCVW 248
[10][TOP]
>UniRef100_B9GM22 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GM22_POPTR
Length = 233
Score = 132 bits (332), Expect = 1e-29
Identities = 62/120 (51%), Positives = 90/120 (75%)
Frame = -1
Query: 469 SVVADILSQETISGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQ 290
+V IL++E++ GLIL+LQ+ + + A K +E F FKVE+FQITDLLVNIT+H L+PQ
Sbjct: 113 TVYGQILNKESLHGLILILQSKMNHFAKKELEKFPFKVEVFQITDLLVNITKHVLQPQMD 172
Query: 289 VLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
+L E ++ K+ +E+KQLPR+ + DAIV+YYGL+KGQ+VK+ Y GE+ + V +RCV
Sbjct: 173 ILTAEQKQQVMNKYKLEDKQLPRMLESDAIVQYYGLQKGQMVKITYSGEIVDHLVTYRCV 232
[11][TOP]
>UniRef100_Q2QXY2 RNA polymerase Rpb5, N-terminal domain containing protein,
expressed n=1 Tax=Oryza sativa Japonica Group
RepID=Q2QXY2_ORYSJ
Length = 335
Score = 129 bits (324), Expect = 1e-28
Identities = 61/114 (53%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Frame = -1
Query: 445 QETISGLILVLQNHVTNQALKAI-ELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDEDN 269
+E +S L+L+LQ+ + ++A +AI E+F FKV+IFQ TDLLVNIT+H LKP+H+VL+ +
Sbjct: 222 EENLSRLVLILQSKILSRAREAIKEIFKFKVDIFQATDLLVNITKHVLKPKHEVLSADQK 281
Query: 268 PTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCVW 107
LLK++++E+ QLPR+ + DA+ RYYG +KG VVKV Y GEL+ VA+RCV+
Sbjct: 282 AKLLKEYNVEDSQLPRMLETDAVARYYGFDKGTVVKVTYDGELTGKRVAYRCVF 335
[12][TOP]
>UniRef100_Q0IQ77 Os12g0139500 protein n=2 Tax=Oryza sativa RepID=Q0IQ77_ORYSJ
Length = 227
Score = 129 bits (324), Expect = 1e-28
Identities = 61/114 (53%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Frame = -1
Query: 445 QETISGLILVLQNHVTNQALKAI-ELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDEDN 269
+E +S L+L+LQ+ + ++A +AI E+F FKV+IFQ TDLLVNIT+H LKP+H+VL+ +
Sbjct: 114 EENLSRLVLILQSKILSRAREAIKEIFKFKVDIFQATDLLVNITKHVLKPKHEVLSADQK 173
Query: 268 PTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCVW 107
LLK++++E+ QLPR+ + DA+ RYYG +KG VVKV Y GEL+ VA+RCV+
Sbjct: 174 AKLLKEYNVEDSQLPRMLETDAVARYYGFDKGTVVKVTYDGELTGKRVAYRCVF 227
[13][TOP]
>UniRef100_B9RGC5 DNA-directed RNA polymerase II, putative n=1 Tax=Ricinus communis
RepID=B9RGC5_RICCO
Length = 239
Score = 128 bits (322), Expect = 2e-28
Identities = 65/119 (54%), Positives = 86/119 (72%)
Frame = -1
Query: 466 VVADILSQETISGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQV 287
++ I ++E+++GLIL+LQ+ + + A K + F KVEIF I+DLLVNIT+H LKP+H+V
Sbjct: 120 LLCQIKNKESLNGLILILQSKMNHYARKELGQFPSKVEIFHISDLLVNITKHVLKPRHEV 179
Query: 286 LNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
L E LL KFS E+KQLPR+ DAI RYYG EKGQVVK+ Y G L +S V +RCV
Sbjct: 180 LTAEQKQQLLNKFSSEDKQLPRMLVTDAISRYYGFEKGQVVKITYSGGLVDSLVTYRCV 238
[14][TOP]
>UniRef100_Q2RAP1 Os11g0143400 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q2RAP1_ORYSJ
Length = 227
Score = 128 bits (321), Expect = 2e-28
Identities = 61/114 (53%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Frame = -1
Query: 445 QETISGLILVLQNHVTNQALKAI-ELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDEDN 269
+E +S L+L+LQ+ + ++A +AI E+F FKV+IFQ TDLLVNIT+H LKP+H+VL+ +
Sbjct: 114 EENLSRLVLILQSKILSRAREAIKEIFKFKVDIFQATDLLVNITKHVLKPKHEVLSADQK 173
Query: 268 PTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCVW 107
LLK++++E+ QLPR+ + DA+ RYYG +KG VVKV Y GEL+ VA+RCV+
Sbjct: 174 AKLLKEYNVEDSQLPRMLETDAVARYYGFDKGTVVKVIYDGELTGKRVAYRCVF 227
[15][TOP]
>UniRef100_A2ZBC5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2ZBC5_ORYSI
Length = 227
Score = 128 bits (321), Expect = 2e-28
Identities = 61/114 (53%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Frame = -1
Query: 445 QETISGLILVLQNHVTNQALKAI-ELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDEDN 269
+E +S L+L+LQ+ + ++A +AI E+F FKV+IFQ TDLLVNIT+H LKP+H+VL+ +
Sbjct: 114 EENLSRLVLILQSKILSRAREAIKEIFKFKVDIFQATDLLVNITKHVLKPKHEVLSADQK 173
Query: 268 PTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCVW 107
LLK++++E+ QLPR+ + DA+ RYYG +KG VVKV Y GEL+ VA+RCV+
Sbjct: 174 AKLLKEYNVEDSQLPRMLETDAVARYYGFDKGTVVKVIYDGELTGKRVAYRCVF 227
[16][TOP]
>UniRef100_C5Y4H1 Putative uncharacterized protein Sb05g002600 n=1 Tax=Sorghum
bicolor RepID=C5Y4H1_SORBI
Length = 263
Score = 126 bits (316), Expect = 8e-28
Identities = 62/121 (51%), Positives = 90/121 (74%), Gaps = 1/121 (0%)
Frame = -1
Query: 466 VVADILSQETISGLILVLQNHVTNQALKAI-ELFSFKVEIFQITDLLVNITEHSLKPQHQ 290
VV + E +S LIL+LQ + ++A +AI E+F +KV+ FQIT+LLVNIT+H+LKP+HQ
Sbjct: 143 VVYTGVKDENLSRLILILQGRIMSKAREAIKEIFPYKVDTFQITELLVNITKHALKPKHQ 202
Query: 289 VLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
VL E+ LLK++++ + QLPR+ + DA+ RYYGL KG VVKV Y EL+ +HV +RC+
Sbjct: 203 VLTAEEKAKLLKEYNVVDSQLPRMLENDAVARYYGLGKGTVVKVIYDSELTGNHVTYRCI 262
Query: 109 W 107
+
Sbjct: 263 F 263
[17][TOP]
>UniRef100_Q2HW77 RNA polymerase subunit, RPB5; RNA polymerase Rpb5, N-terminal n=1
Tax=Medicago truncatula RepID=Q2HW77_MEDTR
Length = 224
Score = 122 bits (307), Expect = 9e-27
Identities = 59/119 (49%), Positives = 86/119 (72%)
Frame = -1
Query: 466 VVADILSQETISGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQV 287
+ + I+ +E +S LILV+Q+ +T+ A K +E FKVEI Q+ DLLVN+T+H L+P+++V
Sbjct: 105 IQSQIVDKERLSRLILVMQSKMTSYARKELENCPFKVEIIQLNDLLVNVTKHVLQPKYEV 164
Query: 286 LNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
L + LL K+ +EEKQLP + + DAI YYGLEKGQVVK+++ GE+ S V +RCV
Sbjct: 165 LTANEKQKLLNKYKVEEKQLPHMLRTDAIASYYGLEKGQVVKISHSGEMFNSLVMYRCV 223
[18][TOP]
>UniRef100_A7Q5P2 Chromosome undetermined scaffold_53, whole genome shotgun sequence
n=1 Tax=Vitis vinifera RepID=A7Q5P2_VITVI
Length = 221
Score = 120 bits (301), Expect = 5e-26
Identities = 55/119 (46%), Positives = 86/119 (72%)
Frame = -1
Query: 466 VVADILSQETISGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQV 287
V+ +++E + LILVLQ+ + + A K ++ + KVE FQIT+LL+NIT+H P+H++
Sbjct: 102 VIFQQINREGLHRLILVLQSKMNSHARKVVDEYPIKVEFFQITELLINITKHVSVPKHEI 161
Query: 286 LNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
L+ ++ L+ K+ +E+KQ P + K DAI RYYGLEKGQVVK+ Y+G +++S V +RCV
Sbjct: 162 LSAQEKRKLVNKYKLEDKQFPIMQKDDAIARYYGLEKGQVVKITYKGGMTDSLVTYRCV 220
[19][TOP]
>UniRef100_UPI0001985D3D PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001985D3D
Length = 1260
Score = 120 bits (300), Expect = 6e-26
Identities = 54/119 (45%), Positives = 86/119 (72%)
Frame = -1
Query: 466 VVADILSQETISGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQV 287
V+ +++E + LILVLQ+ + + A K ++ + KVE FQIT+LL+NIT+H P+H++
Sbjct: 102 VIFQQINREGLHRLILVLQSKMNSHARKVVDEYPIKVEFFQITELLINITKHVSVPKHEI 161
Query: 286 LNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
L+ ++ L+ K+ +E+KQ P + K DAI RYYGLEKGQVVK+ Y+G +++S V +RC+
Sbjct: 162 LSAQEKRKLVNKYKLEDKQFPIMQKDDAIARYYGLEKGQVVKITYKGGMTDSLVTYRCI 220
[20][TOP]
>UniRef100_A5B0H1 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5B0H1_VITVI
Length = 162
Score = 120 bits (300), Expect = 6e-26
Identities = 55/119 (46%), Positives = 86/119 (72%)
Frame = -1
Query: 466 VVADILSQETISGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQV 287
V+ +++E + LILVLQ+ + + A K ++ + KVE FQIT+LL+NIT+H P+H++
Sbjct: 43 VIFQQINREGLHRLILVLQSKMNSHARKVVDEYPIKVEFFQITELLINITKHVSVPKHEI 102
Query: 286 LNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
L+ ++ L+ K+ +E+KQ P + K DAI RYYGLEKGQVVK+ Y+G +++S V +RCV
Sbjct: 103 LSAQEKRKLVNKYKLEDKQXPIMQKDDAIARYYGLEKGQVVKITYKGGMTDSLVTYRCV 161
[21][TOP]
>UniRef100_B6TJI5 DNA-directed RNA polymerase II 23 kDa polypeptide n=1 Tax=Zea mays
RepID=B6TJI5_MAIZE
Length = 264
Score = 119 bits (298), Expect = 1e-25
Identities = 58/115 (50%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAI-ELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDE 275
+ E +S LIL+LQ + + ++I E+F FKV+ FQIT+LLVNIT+H LKP+H+VL E
Sbjct: 149 VKDENLSRLILILQGKIMSTTRESIKEIFRFKVDTFQITELLVNITKHVLKPKHEVLTAE 208
Query: 274 DNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
LLK++++ + QLPR+ + DA+ RYYGL KG VVKV Y EL+ +HV +RC+
Sbjct: 209 GKAKLLKEYNVVDSQLPRMLENDAVARYYGLGKGTVVKVIYDSELTGNHVTYRCI 263
[22][TOP]
>UniRef100_B4FYH9 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FYH9_MAIZE
Length = 248
Score = 119 bits (298), Expect = 1e-25
Identities = 58/115 (50%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAI-ELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDE 275
+ E +S LIL+LQ + + ++I E+F FKV+ FQIT+LLVNIT+H LKP+H+VL E
Sbjct: 133 VKDENLSRLILILQGKIMSTTRESIKEIFRFKVDTFQITELLVNITKHVLKPKHEVLTAE 192
Query: 274 DNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
LLK++++ + QLPR+ + DA+ RYYGL KG VVKV Y EL+ +HV +RC+
Sbjct: 193 GKAKLLKEYNVVDSQLPRMLENDAVARYYGLGKGTVVKVIYDSELTGNHVTYRCI 247
[23][TOP]
>UniRef100_Q9M1H8 RNA polymerase 24kDa subunit-like protein n=1 Tax=Arabidopsis
thaliana RepID=Q9M1H8_ARATH
Length = 233
Score = 106 bits (264), Expect = 9e-22
Identities = 52/109 (47%), Positives = 75/109 (68%)
Frame = -1
Query: 436 ISGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLL 257
+ +ILVLQ+ + + A KA+ F F VE F I DLLVNIT+H +P+ ++LN E+ LL
Sbjct: 124 LHAMILVLQSKMNHFAQKALTTFPFTVETFPIEDLLVNITKHIQQPKIEILNKEEKEQLL 183
Query: 256 KKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
+K ++E+KQLP + +KD+ VRYYGL+K QVVK+ Y E V +RC+
Sbjct: 184 RKHALEDKQLPYLQEKDSFVRYYGLKKKQVVKITYSKEPVGDFVTYRCI 232
[24][TOP]
>UniRef100_Q5VQW7 Os01g0805800 protein n=2 Tax=Oryza sativa RepID=Q5VQW7_ORYSJ
Length = 210
Score = 100 bits (248), Expect = 6e-20
Identities = 52/118 (44%), Positives = 78/118 (66%), Gaps = 2/118 (1%)
Frame = -1
Query: 457 DILSQETISGLILVLQNHVTNQALKAIELFSFKV--EIFQITDLLVNITEHSLKPQHQVL 284
+++ E +S +LVLQ ++T A ++ K+ EIFQ +LL+NI EH L P+HQVL
Sbjct: 92 EMMKAENVSRAVLVLQQNLTPFARSFLQELEPKIHLEIFQEAELLINIKEHVLVPEHQVL 151
Query: 283 NDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
N+E+ TLL++++++E QLPRI D I RYYGL +GQVVK+ E + +V +R V
Sbjct: 152 NNEEKKTLLERYTLKETQLPRIQITDPIARYYGLRRGQVVKIIRPSETAGRYVTYRYV 209
[25][TOP]
>UniRef100_A9RKG6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RKG6_PHYPA
Length = 208
Score = 99.0 bits (245), Expect = 1e-19
Identities = 51/118 (43%), Positives = 78/118 (66%), Gaps = 2/118 (1%)
Frame = -1
Query: 457 DILSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVL 284
D + E + ILV+Q ++T A + + S K VE+FQ +LLVNI +H L PQH+VL
Sbjct: 90 DRMKTENVHRAILVVQQNLTPFARQCVSEMSSKYHVEVFQEAELLVNIKDHVLVPQHEVL 149
Query: 283 NDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
N E+ TLL++++++E QLPR+ + D + RYYGL++GQVVK+ E + +V +R V
Sbjct: 150 NAEEKITLLQRYTVKETQLPRMQENDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFV 207
[26][TOP]
>UniRef100_B9N7D1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N7D1_POPTR
Length = 206
Score = 97.8 bits (242), Expect = 3e-19
Identities = 52/116 (44%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLND 278
+ E + ILV+Q ++T A I S F +E+FQ +LLVNI EH L P+HQVL++
Sbjct: 90 MKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAELLVNIKEHVLVPEHQVLSN 149
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ TLL++++++E QLPRI D I RYYGL++GQVVK+ E + +V +R V
Sbjct: 150 EEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYV 205
[27][TOP]
>UniRef100_C6SXZ4 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SXZ4_SOYBN
Length = 206
Score = 97.4 bits (241), Expect = 4e-19
Identities = 51/116 (43%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLND 278
++ E + ILV Q ++T A I S F +E+FQ +LLVNI EH L P+HQVL D
Sbjct: 90 MNSENVYRAILVTQTNLTPFARTCISEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTD 149
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
+ TLL++++++E QLPRI D + RYYGL++GQVVK+ E + +V +R V
Sbjct: 150 AEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFV 205
[28][TOP]
>UniRef100_C6SVA4 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SVA4_SOYBN
Length = 206
Score = 97.4 bits (241), Expect = 4e-19
Identities = 51/116 (43%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLND 278
++ E + ILV Q ++T A I S F +E+FQ +LLVNI EH L P+HQVL D
Sbjct: 90 MNSENVYRAILVTQTNLTPFARTCISEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTD 149
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
+ TLL++++++E QLPRI D + RYYGL++GQVVK+ E + +V +R V
Sbjct: 150 AEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFV 205
[29][TOP]
>UniRef100_B9ETS9 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9ETS9_ORYSJ
Length = 210
Score = 97.4 bits (241), Expect = 4e-19
Identities = 51/118 (43%), Positives = 77/118 (65%), Gaps = 2/118 (1%)
Frame = -1
Query: 457 DILSQETISGLILVLQNHVTNQALKAIELFSFKV--EIFQITDLLVNITEHSLKPQHQVL 284
+++ E +S +LVLQ ++T A ++ K+ EIFQ +LL+NI EH L P+HQVL
Sbjct: 92 EMMKAENVSRAVLVLQQNLTPFARSFLQELEPKIHLEIFQEAELLINIKEHVLVPEHQVL 151
Query: 283 NDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
N+ + TLL++++++E QLPRI D I RYYGL +GQVVK+ E + +V +R V
Sbjct: 152 NNGEKKTLLERYTLKETQLPRIQITDPIARYYGLRRGQVVKIIRPSETAGRYVTYRYV 209
[30][TOP]
>UniRef100_A9BK88 Rpabc5 n=1 Tax=Cryptophyta RepID=A9BK88_9CRYP
Length = 216
Score = 97.1 bits (240), Expect = 5e-19
Identities = 46/115 (40%), Positives = 76/115 (66%), Gaps = 3/115 (2%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTN---QALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQVLN 281
+ Q+ I+VL +T+ QA+ +I K+E F ++L+VNITEH+L P+H++++
Sbjct: 98 IKQDGFQNSIIVLHGKLTSHAKQAINSINSLDDKIEYFSESELIVNITEHNLVPKHEIIS 157
Query: 280 DEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
+E+ L K++SI E QLPRI+K+D I RY+GL+K Q++K+ E S +V +R
Sbjct: 158 EEEARCLFKRYSIRENQLPRINKRDPIARYFGLQKNQIMKIIRSSETSGRYVTYR 212
[31][TOP]
>UniRef100_B9RKM1 DNA-directed RNA polymerase II, putative n=1 Tax=Ricinus communis
RepID=B9RKM1_RICCO
Length = 225
Score = 96.3 bits (238), Expect = 9e-19
Identities = 53/116 (45%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAI-ELFS-FKVEIFQITDLLVNITEHSLKPQHQVLND 278
+ E + ILV+Q +T A I E+ S F +E+FQ ++LLVNI EH L P+HQVL +
Sbjct: 109 MKSENVFRAILVVQQSLTPFARTCIAEIASKFHLEVFQESELLVNIKEHVLVPEHQVLTN 168
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ TLL++++++E QLPRI D I RYYGL++GQVVK+ E + +V +R V
Sbjct: 169 EEKKTLLERYTVKETQLPRIQISDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYV 224
[32][TOP]
>UniRef100_B4FU06 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Zea mays
RepID=B4FU06_MAIZE
Length = 210
Score = 95.9 bits (237), Expect = 1e-18
Identities = 50/118 (42%), Positives = 77/118 (65%), Gaps = 2/118 (1%)
Frame = -1
Query: 457 DILSQETISGLILVLQNHVTNQALKAIELFSFKV--EIFQITDLLVNITEHSLKPQHQVL 284
++++ E +S +LVLQ ++T A + K+ EIFQ ++L+NI EH L P+HQVL
Sbjct: 92 EMMTHENVSRAVLVLQQNLTPFAKSFLIELEPKIHLEIFQEAEMLINIKEHVLVPEHQVL 151
Query: 283 NDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
+E+ TLL++++++E QLPRI D I RYYGL +GQVVK+ E + +V +R V
Sbjct: 152 TNEEKKTLLERYTLKETQLPRIQITDPIARYYGLRRGQVVKIIRPSETAGRYVTYRYV 209
[33][TOP]
>UniRef100_B4FEX9 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FEX9_MAIZE
Length = 127
Score = 95.9 bits (237), Expect = 1e-18
Identities = 50/118 (42%), Positives = 77/118 (65%), Gaps = 2/118 (1%)
Frame = -1
Query: 457 DILSQETISGLILVLQNHVTNQALKAIELFSFKV--EIFQITDLLVNITEHSLKPQHQVL 284
++++ E +S +LVLQ ++T A + K+ EIFQ ++L+NI EH L P+HQVL
Sbjct: 9 EMMTHENVSRAVLVLQQNLTPFAKSFLIELEPKIHLEIFQEAEMLINIKEHVLVPEHQVL 68
Query: 283 NDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
+E+ TLL++++++E QLPRI D I RYYGL +GQVVK+ E + +V +R V
Sbjct: 69 TNEEKKTLLERYTLKETQLPRIQITDPIARYYGLRRGQVVKIIRPSETAGRYVTYRYV 126
[34][TOP]
>UniRef100_B3TLL2 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Elaeis
guineensis RepID=B3TLL2_ELAGV
Length = 204
Score = 95.9 bits (237), Expect = 1e-18
Identities = 52/116 (44%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ E ++ ILV+Q +T A +++ S K +E+FQ T+LLVNI EH L P+HQVL
Sbjct: 88 MKAENVTRGILVVQQALTPFARQSLAEVSQKYMLEVFQDTELLVNIKEHVLVPEHQVLTS 147
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ TLL++++++E QLPRI D I RYYGL++GQVVK+ E + +V +R V
Sbjct: 148 EEKKTLLERYTLKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYV 203
[35][TOP]
>UniRef100_A7PEL2 Chromosome chr11 scaffold_13, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PEL2_VITVI
Length = 206
Score = 95.9 bits (237), Expect = 1e-18
Identities = 50/116 (43%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLND 278
+ E + ILV+Q ++T A I S F +E+FQ +LLVNI EH L P+HQVL
Sbjct: 90 MKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAELLVNIKEHVLVPEHQVLTS 149
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ TLL++++++E QLPRI D I RY+GL++GQVVK+ E + ++ +R V
Sbjct: 150 EEKKTLLERYTVKETQLPRIQVSDPIARYFGLKRGQVVKIIRPSETAGRYITYRYV 205
[36][TOP]
>UniRef100_O81098 RNA polymerase I, II and III 24.3 kDa subunit n=1 Tax=Arabidopsis
thaliana RepID=O81098_ARATH
Length = 205
Score = 94.7 bits (234), Expect = 3e-18
Identities = 50/116 (43%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLND 278
+ E + ILV+Q ++T A I S F +E+FQ ++LVNI EH L P+HQVL
Sbjct: 89 MKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTT 148
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ TLL++++++E QLPRI D I RY+GL++GQVVK+ E + +V +R V
Sbjct: 149 EEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIRPSETAGRYVTYRYV 204
[37][TOP]
>UniRef100_B8C1Q1 RPB5,-like protein to RNA polymerase i n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8C1Q1_THAPS
Length = 226
Score = 94.7 bits (234), Expect = 3e-18
Identities = 48/119 (40%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Frame = -1
Query: 466 VVADILSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQH 293
++ D + E +S ILVL+ +T A +A+ S F++E F+ +LLV+ITEH+L P+H
Sbjct: 105 ILTDRMKDENVSNAILVLRGDITPFAKQAVLEMSDSFRLEHFKEAELLVDITEHTLVPEH 164
Query: 292 QVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
VL+ + LLK++ + E QLPRI D + RYYG+++GQVVK+ E + +V +R
Sbjct: 165 LVLSQNEKQELLKRYRLRETQLPRIQPNDPVARYYGMKRGQVVKIIRPSETAGRYVTYR 223
[38][TOP]
>UniRef100_Q7XUF8 OJ991113_30.8 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q7XUF8_ORYSJ
Length = 205
Score = 94.4 bits (233), Expect = 4e-18
Identities = 48/116 (41%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLND 278
+ QE++ ILV+Q ++ A A++ S F +E+FQ +LLVNI +H+L P+H++L
Sbjct: 89 MKQESVFNGILVVQQALSAFARSAVQEVSQKFHLEVFQEAELLVNIKDHTLVPEHELLTP 148
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E TLL++++++E QLPRI D I RYYG+++GQVVK+ E + +V +R V
Sbjct: 149 EQKKTLLERYTVKETQLPRIQITDPIARYYGMKRGQVVKIIRASETAGRYVTYRYV 204
[39][TOP]
>UniRef100_A9RWG5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWG5_PHYPA
Length = 208
Score = 92.8 bits (229), Expect = 1e-17
Identities = 47/118 (39%), Positives = 76/118 (64%), Gaps = 2/118 (1%)
Frame = -1
Query: 457 DILSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVL 284
D + E + ILV+Q ++T A + + + K +E+FQ +LLVNI EH L P H+VL
Sbjct: 90 DRMKTENVHRAILVVQQNLTPFARQCVSEMASKYHLEVFQEAELLVNIKEHVLVPLHEVL 149
Query: 283 NDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++ TLL++++++E QLPR+ + D + RYYGL++GQVVK+ E + +V +R V
Sbjct: 150 TPDEKKTLLERYTVKETQLPRMQENDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFV 207
[40][TOP]
>UniRef100_B7FSY0 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7FSY0_PHATR
Length = 228
Score = 92.4 bits (228), Expect = 1e-17
Identities = 46/119 (38%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Frame = -1
Query: 466 VVADILSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQH 293
V D + E++S I++L+ +T A +A++ S F++E F+ ++LLV+IT+H L P H
Sbjct: 107 VYTDRMRAESVSNAIIILRVDITPFAKQAVQEMSDSFRIEHFKESELLVDITKHQLVPVH 166
Query: 292 QVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
QVL + LLK++ +++ QLPRI D + RYYG+ +GQVVK+ E + +V +R
Sbjct: 167 QVLTPNEKNELLKRYRLKDSQLPRIQSNDPVARYYGMRRGQVVKIIRPSETAGRYVTYR 225
[41][TOP]
>UniRef100_B4FGM1 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FGM1_MAIZE
Length = 206
Score = 91.3 bits (225), Expect = 3e-17
Identities = 47/116 (40%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ E + ILV+Q ++ A A++ S K +E+FQ +LLVNI +H L P+H +L
Sbjct: 90 MKNENVFAGILVVQQALSAFARSAVQEVSQKYHLEVFQEAELLVNIKDHVLVPEHVLLTP 149
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
ED TLL++++++E QLPRI D I RYYG+++GQVVK+ E + ++ +R V
Sbjct: 150 EDKKTLLERYTVKETQLPRIQITDPIARYYGMKRGQVVKITRASETAGRYITYRYV 205
[42][TOP]
>UniRef100_B0D9Y7 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0D9Y7_LACBS
Length = 208
Score = 91.3 bits (225), Expect = 3e-17
Identities = 47/115 (40%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Frame = -1
Query: 454 ILSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLN 281
IL +++I I+V ++T A K I + +++E F DLLVNI H+L P+H VL+
Sbjct: 91 ILEEKSIQRGIIVFPGNMTPSARKVIVAMAQQYRLEEFSEADLLVNIVHHTLVPRHDVLS 150
Query: 280 DEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
++ TLL+K+ ++E QLPRI D + RYYGL +GQVVK+ E S + ++R
Sbjct: 151 PDEKKTLLEKYRLKETQLPRIQLADPVARYYGLRRGQVVKITRPSETSGRYASYR 205
[43][TOP]
>UniRef100_B9W9S0 DNA-directed RNA polymerases I, II and III subunit, putative n=1
Tax=Candida dubliniensis CD36 RepID=B9W9S0_CANDC
Length = 214
Score = 90.9 bits (224), Expect = 4e-17
Identities = 46/113 (40%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS-FKVEIFQITDLLVNITEHSLKPQHQVLNDE 275
++++ S I + QN +T A K I S +EIFQ DL+VNIT H L P+H LN E
Sbjct: 99 ITEKNFSTGIFIYQNSMTPSANKLIPTVSPATIEIFQENDLIVNITHHELVPKHLKLNHE 158
Query: 274 DNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
+ LL ++ ++E QLPRI ++D + RY GL++G++VK+ R E S + ++R
Sbjct: 159 EKKELLTRYRLKESQLPRIQREDPVARYLGLKRGEIVKIIRRSETSGRYASYR 211
[44][TOP]
>UniRef100_Q59PF3 Putative uncharacterized protein RPB5 n=1 Tax=Candida albicans
RepID=Q59PF3_CANAL
Length = 179
Score = 90.5 bits (223), Expect = 5e-17
Identities = 46/113 (40%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS-FKVEIFQITDLLVNITEHSLKPQHQVLNDE 275
++++ S I + QN +T A K I S +EIFQ DL+VNIT H L P+H LN E
Sbjct: 64 ITEKNFSTGIFIYQNSMTPSANKLIPTVSPATIEIFQENDLIVNITHHELVPKHLKLNRE 123
Query: 274 DNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
+ LL ++ ++E QLPRI ++D + RY GL++G++VK+ R E S + ++R
Sbjct: 124 EKKELLTRYRLKESQLPRIQREDPVARYLGLKRGEIVKIIRRSETSGRYASYR 176
[45][TOP]
>UniRef100_C4YG42 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Candida
albicans RepID=C4YG42_CANAL
Length = 214
Score = 90.5 bits (223), Expect = 5e-17
Identities = 46/113 (40%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS-FKVEIFQITDLLVNITEHSLKPQHQVLNDE 275
++++ S I + QN +T A K I S +EIFQ DL+VNIT H L P+H LN E
Sbjct: 99 ITEKNFSTGIFIYQNSMTPSANKLIPTVSPATIEIFQENDLIVNITHHELVPKHLKLNRE 158
Query: 274 DNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
+ LL ++ ++E QLPRI ++D + RY GL++G++VK+ R E S + ++R
Sbjct: 159 EKKELLTRYRLKESQLPRIQREDPVARYLGLKRGEIVKIIRRSETSGRYASYR 211
[46][TOP]
>UniRef100_C5KB88 DNA-directed RNA polymerases II 24 kDa polypeptide, putative n=1
Tax=Perkinsus marinus ATCC 50983 RepID=C5KB88_9ALVE
Length = 213
Score = 90.1 bits (222), Expect = 7e-17
Identities = 47/117 (40%), Positives = 75/117 (64%), Gaps = 3/117 (2%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLND 278
+ ++ +S ILV+Q +T A AI+ S ++E+F ++L+VNIT H L P+H+ L
Sbjct: 97 MEEQRLSRAILVVQQPLTAFAKTAIQEASPQMEIEVFNESELVVNITHHELVPEHKPLTP 156
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR-CV 110
E+ LL+++ ++E QLPRI D + RYYGL+KGQV+K+ E + +V +R CV
Sbjct: 157 EEKRLLLERYKVKENQLPRIQSSDPVARYYGLKKGQVMKIIRPSETAGRYVTYRLCV 213
[47][TOP]
>UniRef100_A8NU15 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8NU15_COPC7
Length = 273
Score = 90.1 bits (222), Expect = 7e-17
Identities = 45/115 (39%), Positives = 73/115 (63%), Gaps = 2/115 (1%)
Frame = -1
Query: 454 ILSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLN 281
I+ ++ I I++ +T+ A K I + +++E F DLLVNIT H+L P+H+VL+
Sbjct: 156 IMEEKAIQRGIIIFPATMTSSARKVISAMASTYRLEEFAEADLLVNITHHTLVPRHEVLS 215
Query: 280 DEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
E+ TLL+++ +++ QLPRI D + RYYGL +GQVVK+ E S + ++R
Sbjct: 216 PEEKKTLLERYRLKDTQLPRIQPMDPVARYYGLRRGQVVKIIRPSETSGRYASYR 270
[48][TOP]
>UniRef100_A5E1U0 DNA-directed RNA polymerases II 24 kDa polypeptide n=1
Tax=Lodderomyces elongisporus RepID=A5E1U0_LODEL
Length = 179
Score = 90.1 bits (222), Expect = 7e-17
Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS-FKVEIFQITDLLVNITEHSLKPQHQVLNDE 275
+S++ I + QN +T A K I +E FQ TDL+VNIT H L P+H LN E
Sbjct: 64 ISEKNFQVGIFIYQNSITPSANKLIPTVQPASIETFQETDLIVNITHHELVPKHIKLNRE 123
Query: 274 DNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
+ LL+++ ++E QLPRI ++D + RY GL++G+VVK+ R E S + ++R
Sbjct: 124 EKKELLERYRLKESQLPRIQREDPVARYLGLKRGEVVKIIRRSETSGRYASYR 176
[49][TOP]
>UniRef100_Q01A87 RNA polymerase I, II and III 24.3 kDa subunit (ISS) n=1
Tax=Ostreococcus tauri RepID=Q01A87_OSTTA
Length = 1124
Score = 89.7 bits (221), Expect = 9e-17
Identities = 48/122 (39%), Positives = 76/122 (62%), Gaps = 4/122 (3%)
Frame = -1
Query: 463 VADILSQETISGLILVLQNHVT---NQALKAIELFSFKVEIFQITDLLVNITEHSLKPQH 293
+A + +E + I+V+Q +T Q+L + F +E FQ T+LLVNI +H L P+H
Sbjct: 1003 LAKRMKEENVFRAIIVVQASLTPFAKQSLLECQTQKFYIEQFQETELLVNIVDHVLVPEH 1062
Query: 292 QVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR- 116
+L+DE TLL+++ +++ QLPRI D I RYYG+ +GQVV++ E + +V +R
Sbjct: 1063 ILLSDEQKRTLLERYKVKDTQLPRIQMHDPIARYYGMRRGQVVRIIRPSETAGRYVTYRL 1122
Query: 115 CV 110
CV
Sbjct: 1123 CV 1124
[50][TOP]
>UniRef100_C5KHW9 DNA-directed RNA polymerases II 24 kDa polypeptide, putative n=1
Tax=Perkinsus marinus ATCC 50983 RepID=C5KHW9_9ALVE
Length = 213
Score = 89.7 bits (221), Expect = 9e-17
Identities = 47/117 (40%), Positives = 75/117 (64%), Gaps = 3/117 (2%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLND 278
+ ++ +S ILV+Q +T A AI+ S ++E+F ++L+VNIT H L P+H+ L
Sbjct: 97 MEEQRLSRAILVVQQPLTAFAKTAIQEASPQMEIEVFNESELVVNITHHELVPEHKPLTA 156
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR-CV 110
E+ LL+++ ++E QLPRI D + RYYGL+KGQV+K+ E + +V +R CV
Sbjct: 157 EEKRLLLERYKVKENQLPRIQSSDPVARYYGLKKGQVMKIIRPSETAGRYVTYRLCV 213
[51][TOP]
>UniRef100_C4R3P8 RNA polymerase subunit ABC27, common to RNA polymerases I, II, and
III n=1 Tax=Pichia pastoris GS115 RepID=C4R3P8_PICPG
Length = 214
Score = 89.4 bits (220), Expect = 1e-16
Identities = 46/113 (40%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDE 275
+ ++ S I + QN++T A K I S + E FQ +DL+VNIT H L P+H L+D
Sbjct: 99 IQEKNFSTGIFIYQNNITPSANKMIPTVSPAIIETFQESDLVVNITHHELVPKHIRLSDG 158
Query: 274 DNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
+ LL+++ ++E QLPRI ++D + RY GL++GQVVK+ R E S + ++R
Sbjct: 159 EKSQLLQRYKLKESQLPRIQREDPVARYLGLKRGQVVKIIRRSETSGRYASYR 211
[52][TOP]
>UniRef100_C5MBX4 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Candida
tropicalis MYA-3404 RepID=C5MBX4_CANTT
Length = 214
Score = 89.0 bits (219), Expect = 1e-16
Identities = 45/113 (39%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDE 275
++++ S + + QN +T A K I S V EIFQ +DL+VNIT H L P+H L+ +
Sbjct: 99 ITEKNFSTGLFIYQNSITPSANKLIPTVSPSVIEIFQESDLIVNITHHELVPKHLKLSKD 158
Query: 274 DNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
+ LL+++ ++E QLPRI ++D + RY GL++G+VVK+ R E S + ++R
Sbjct: 159 EKVELLERYRLKESQLPRIQREDPVARYLGLKRGEVVKIIRRSETSGRYASYR 211
[53][TOP]
>UniRef100_B6JZQ6 DNA-directed RNA polymerase I n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JZQ6_SCHJY
Length = 211
Score = 87.4 bits (215), Expect = 4e-16
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 2/105 (1%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKK 251
IL+ N++T A K I + F +E FQ +DL+VNIT H L P+H +L E+ LL +
Sbjct: 104 ILIYANNMTPSATKIISTVTGQFTIETFQESDLIVNITHHELVPKHVLLTPEEKKELLDR 163
Query: 250 FSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
+ + E QLPRI D + RY GL++GQVVK+ R E S + ++R
Sbjct: 164 YKLRETQLPRIQMADPVARYLGLKRGQVVKIVRRSETSGRYNSYR 208
[54][TOP]
>UniRef100_C1MXV4 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MXV4_9CHLO
Length = 206
Score = 87.0 bits (214), Expect = 6e-16
Identities = 47/118 (39%), Positives = 73/118 (61%), Gaps = 4/118 (3%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVT---NQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQVLN 281
+ E++ I+V+Q +T Q+L SF +E FQ +LLVNITEH L P+H +L+
Sbjct: 89 MKDESVFRAIIVVQASLTPFAKQSLLECASQSFYIEQFQEMELLVNITEHVLVPEHVLLS 148
Query: 280 DEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR-CV 110
D + TLL ++ +++ QLPRI D + RYYG+ +GQVV++ E + +V +R CV
Sbjct: 149 DAEKRTLLARYKVKDTQLPRIQLHDPVARYYGMRRGQVVRIIRPSETAGRYVTYRLCV 206
[55][TOP]
>UniRef100_B8LR68 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LR68_PICSI
Length = 194
Score = 87.0 bits (214), Expect = 6e-16
Identities = 44/114 (38%), Positives = 70/114 (61%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDED 272
+ E + ILV+Q + + F +E+FQ +LLVNI EH L P+ Q+L E+
Sbjct: 89 MKSEGVFRAILVVQQEFSGK---------FHLEVFQEAELLVNIKEHVLVPEQQILTPEE 139
Query: 271 NPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
TLL++++++E QLPR+ + D + RYYGL++GQVVK+ E + +V +R V
Sbjct: 140 KKTLLERYTLKETQLPRMQESDPVARYYGLKRGQVVKIIRPSETAGRYVTYRYV 193
[56][TOP]
>UniRef100_A8J805 DNA-directed RNA polymerase II, 23 kDa polypeptide n=1
Tax=Chlamydomonas reinhardtii RepID=A8J805_CHLRE
Length = 206
Score = 87.0 bits (214), Expect = 6e-16
Identities = 45/119 (37%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
Frame = -1
Query: 466 VVADILSQETISGLILVLQNHVTNQALKAIELF--SFKVEIFQITDLLVNITEHSLKPQH 293
++A+ + E ++ I+V + T A A+E + +E F ++LLVNITEH L P+H
Sbjct: 81 LLAERMKDEKVNRAIMVTPSKFTPFAKSALEDMRPKYHIEHFLESELLVNITEHVLVPEH 140
Query: 292 QVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
++L+ ++ TLL ++ I+E QLPRI DA+ RY GL++GQVV++ E + +V +R
Sbjct: 141 RILSPDEKRTLLDRYKIKETQLPRIQASDAVARYLGLQRGQVVRIVRPSETAGRYVTYR 199
[57][TOP]
>UniRef100_C1EDR8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EDR8_9CHLO
Length = 204
Score = 86.7 bits (213), Expect = 7e-16
Identities = 45/118 (38%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVT---NQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQVLN 281
+ E ++ I+V+Q +T Q+L + F +E FQ +LLVNIT+H L P+H +L+
Sbjct: 87 MKDEQVNRAIIVVQQSLTPFARQSLLECQAQKFYIEQFQEAELLVNITDHVLVPEHILLS 146
Query: 280 DEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR-CV 110
DE LL ++ ++E QLPRI D + RY+G+ +GQVV++ E + +V +R CV
Sbjct: 147 DEQKRVLLDRYKVKETQLPRIQMHDPVARYFGMRRGQVVRIIRPSETAGRYVTYRLCV 204
[58][TOP]
>UniRef100_A4RWP8 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RWP8_OSTLU
Length = 205
Score = 86.7 bits (213), Expect = 7e-16
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 4/122 (3%)
Frame = -1
Query: 463 VADILSQETISGLILVLQNHVT---NQALKAIELFSFKVEIFQITDLLVNITEHSLKPQH 293
+A + E + I+V+Q +T Q+L + F +E FQ T+LLVNI +H L P+H
Sbjct: 84 LAKRMKDENVFRAIIVVQASLTPFAKQSLLECQTQKFYIEQFQETELLVNIIDHVLVPEH 143
Query: 292 QVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR- 116
+L+D+ TLL ++ +++ QLPRI D I RYYG+ +GQVV++ E + +V +R
Sbjct: 144 ILLSDDQKRTLLDRYKVKDTQLPRIQMHDPIARYYGMRRGQVVRIIRPSETAGRYVTYRL 203
Query: 115 CV 110
CV
Sbjct: 204 CV 205
[59][TOP]
>UniRef100_A3GI06 DNA-directed RNA polymerases II 24 kDa polypeptide (RNA polymerase
II subunit 5) n=1 Tax=Pichia stipitis RepID=A3GI06_PICST
Length = 213
Score = 86.3 bits (212), Expect = 1e-15
Identities = 44/113 (38%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS-FKVEIFQITDLLVNITEHSLKPQHQVLNDE 275
+S++ S I + QN +T A K I S +E FQ DL+VNIT H L P+H L+ +
Sbjct: 98 ISEKNFSTGIFIYQNSITPSANKLIPTVSPASIETFQEGDLVVNITHHELVPKHIKLSRD 157
Query: 274 DNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
+ LL ++ ++E QLPR+ ++D + RY GL++G+VVK+ R E S + ++R
Sbjct: 158 EKKELLDRYRLKESQLPRVQREDPVARYLGLKRGEVVKIIRRSETSGRYASYR 210
[60][TOP]
>UniRef100_Q5DDM1 SJCHGC05306 protein n=1 Tax=Schistosoma japonicum
RepID=Q5DDM1_SCHJA
Length = 206
Score = 85.9 bits (211), Expect = 1e-15
Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Frame = -1
Query: 451 LSQETISGLILVLQNH-VTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLN 281
+ Q++ ILVLQ +T A AI S K +E F +L+VNITEH L PQH VL
Sbjct: 89 MQQDSTYRAILVLQEKGLTPSAKTAIAELSCKYTLECFFENELMVNITEHQLVPQHDVLT 148
Query: 280 DEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL+++ ++E QLP++ D + RYYGL +GQVV++ E + ++ +R V
Sbjct: 149 QEEKKELLERYRLKENQLPKMQASDPVARYYGLRRGQVVRITRPSETAGRYITYRIV 205
[61][TOP]
>UniRef100_C4PZ68 DNA-directed RNA polymerase II, putative (Fragment) n=1
Tax=Schistosoma mansoni RepID=C4PZ68_SCHMA
Length = 208
Score = 85.9 bits (211), Expect = 1e-15
Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Frame = -1
Query: 451 LSQETISGLILVLQNH-VTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLN 281
+ Q++ ILVLQ +T A AI S K +E F +L+VNITEH L PQH VL
Sbjct: 91 MQQDSTYRAILVLQEKGLTPSAKTAIAELSCKYTLECFFENELMVNITEHQLVPQHNVLT 150
Query: 280 DEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL+++ ++E QLP++ D + RYYGL +GQVV++ E + ++ +R V
Sbjct: 151 QEEKKELLERYRLKENQLPKMQASDPVARYYGLRRGQVVRITRPSETAGRYITYRIV 207
[62][TOP]
>UniRef100_A3AV22 Putative uncharacterized protein n=2 Tax=Oryza sativa
RepID=A3AV22_ORYSJ
Length = 217
Score = 85.5 bits (210), Expect = 2e-15
Identities = 48/128 (37%), Positives = 77/128 (60%), Gaps = 14/128 (10%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLND 278
+ QE++ ILV+Q ++ A A++ S F +E+FQ +LLVNI +H+L P+H++L
Sbjct: 89 MKQESVFNGILVVQQALSAFARSAVQEVSQKFHLEVFQEAELLVNIKDHTLVPEHELLTP 148
Query: 277 EDNPTLLKKFSIEEKQ------------LPRISKKDAIVRYYGLEKGQVVKVNYRGELSE 134
E TLL++++++E Q LPRI D I RYYG+++GQVVK+ E +
Sbjct: 149 EQKKTLLERYTVKETQILSLTQLVKCVNLPRIQITDPIARYYGMKRGQVVKIIRASETAG 208
Query: 133 SHVAFRCV 110
+V +R V
Sbjct: 209 RYVTYRYV 216
[63][TOP]
>UniRef100_Q4U8E3 DNA-directed RNA polymerase, subunit (RPB5 homologue), putative n=1
Tax=Theileria annulata RepID=Q4U8E3_THEAN
Length = 205
Score = 84.7 bits (208), Expect = 3e-15
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ I ILV QN +T A AI K +E F T+LLVNIT+H L P+H L
Sbjct: 89 MEDHDIHRAILVTQNVLTPFAKDAIMEAYPKNIIENFMETELLVNITKHELVPKHIPLTM 148
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL+K+ ++E Q+PRI D + RY+GL KGQVVK+ E + +V FR V
Sbjct: 149 EEKQNLLQKYKVKESQIPRIQSADPVARYFGLSKGQVVKIIRPSETAGRYVTFRLV 204
[64][TOP]
>UniRef100_Q4N141 DNA-directed RNA polymerase II, putative n=1 Tax=Theileria parva
RepID=Q4N141_THEPA
Length = 205
Score = 84.7 bits (208), Expect = 3e-15
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ I ILV QN +T A AI K +E F T+LLVNIT+H L P+H L
Sbjct: 89 MEDHDIHRAILVTQNVLTPFAKDAIMEAYPKNIIENFMETELLVNITKHELVPKHIPLTM 148
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL+K+ ++E Q+PRI D + RY+GL KGQVVK+ E + +V FR V
Sbjct: 149 EEKQNLLQKYKVKESQIPRIQSADPVARYFGLSKGQVVKIIRPSETAGRYVTFRLV 204
[65][TOP]
>UniRef100_C1C1G9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Caligus clemensi RepID=C1C1G9_9MAXI
Length = 210
Score = 84.7 bits (208), Expect = 3e-15
Identities = 44/116 (37%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ I+V+Q +T A +++ + K +E F ++LL+N+TEH L P+H V+
Sbjct: 94 MQEENITRAIIVVQAGMTPSAKQSLMDMAPKYILEQFLESELLINLTEHDLVPEHVVMTP 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LLKK+ ++E QL RI D + RYYGL++GQVVK+ E + ++++R V
Sbjct: 154 EEKKELLKKYKLKENQLMRIQAGDPVARYYGLKRGQVVKIIRPSETAGRYISYRLV 209
[66][TOP]
>UniRef100_C1BRK0 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Caligus rogercresseyi RepID=C1BRK0_9MAXI
Length = 210
Score = 84.7 bits (208), Expect = 3e-15
Identities = 43/116 (37%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ I+++Q+ +T A +++ + K +E F ++LL+N+TEH L P+H V+
Sbjct: 94 MQEENITRAIILVQSGMTPSAKQSLMDMAPKYILEQFLESELLINLTEHDLVPEHVVMTP 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LLKK+ ++E QL RI D + RYYGL++GQVVK+ E + ++++R V
Sbjct: 154 EEKKELLKKYKLKENQLMRIQAGDPVARYYGLKRGQVVKIIRPSETAGRYISYRLV 209
[67][TOP]
>UniRef100_B6AE06 DNA-directed RNA polymerase 2, putative n=1 Tax=Cryptosporidium
muris RN66 RepID=B6AE06_9CRYT
Length = 205
Score = 84.7 bits (208), Expect = 3e-15
Identities = 47/120 (39%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Frame = -1
Query: 463 VADILSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQ 290
+ + + + I IL+ QN +T A AI + K +E F +LLVNIT H L P+H
Sbjct: 85 IVEKMDEHNIQRAILISQNVLTAHAKVAILDAAPKHYIESFLENELLVNITRHELVPKHV 144
Query: 289 VLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
+L+DE+ LL+++ ++E QLPRI D + RY+GL K QVVK+ E + +V +R V
Sbjct: 145 LLSDEEKSQLLERYKVKETQLPRIQHADPVARYFGLAKSQVVKIIRPSETAGRYVTYRLV 204
[68][TOP]
>UniRef100_C4Y929 DNA-directed RNA polymerases II 24 kDa polypeptide n=1
Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y929_CLAL4
Length = 287
Score = 84.7 bits (208), Expect = 3e-15
Identities = 44/113 (38%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS-FKVEIFQITDLLVNITEHSLKPQHQVLNDE 275
+S++ S I + Q +T A K I S +E+FQ +DL+VNIT H L P+H L+
Sbjct: 172 ISEKNFSTGIFIYQTSITPSANKLIPTVSPATIEVFQESDLVVNITHHELVPKHIRLSKP 231
Query: 274 DNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
+ LL ++ ++E QLPRI ++D + RY GL++G VVK+ R E S + ++R
Sbjct: 232 EKKELLDRYRLKESQLPRIQREDPVARYLGLKRGDVVKIIRRSETSGRYASYR 284
[69][TOP]
>UniRef100_A5DHL4 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Pichia
guilliermondii RepID=A5DHL4_PICGU
Length = 179
Score = 84.7 bits (208), Expect = 3e-15
Identities = 43/113 (38%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS-FKVEIFQITDLLVNITEHSLKPQHQVLNDE 275
+S++ S I + QN +T A K + + +E FQ +DL+VNIT H L P+H L+
Sbjct: 64 ISEKNFSTGIFIYQNSITPSANKLVPTVAPASIETFQESDLIVNITHHDLVPKHIKLSIG 123
Query: 274 DNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
+ LL ++ ++E QLPRI ++D + RY GL++G+VVK+ R E S + ++R
Sbjct: 124 EKKELLARYRLKESQLPRIQREDPVARYLGLKRGEVVKIIRRSETSGRYASYR 176
[70][TOP]
>UniRef100_Q5CNJ4 DNA-directed RNA polymerase 2 n=2 Tax=Cryptosporidium
RepID=Q5CNJ4_CRYHO
Length = 205
Score = 84.3 bits (207), Expect = 4e-15
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Frame = -1
Query: 463 VADILSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQ 290
+ + + + I IL+ QN +T A AI + K +E F +LLVNIT+H L P+H
Sbjct: 85 IVEKMDEHAIQRAILISQNVLTAHAKVAILDAAPKHYIESFLENELLVNITKHELVPKHI 144
Query: 289 VLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
+L+D++ LL ++ I+E QLPRI D + RY+GL KGQVVK+ E + +V +R V
Sbjct: 145 LLSDDEKLQLLDRYKIKETQLPRIQYADPVARYFGLAKGQVVKIIRPSETAGRYVTYRLV 204
[71][TOP]
>UniRef100_C3ZQF0 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3ZQF0_BRAFL
Length = 210
Score = 84.3 bits (207), Expect = 4e-15
Identities = 44/114 (38%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E IS I+V+Q +T A +A+ + K +E F ++LL+NITEH L P+H V+
Sbjct: 94 MQEENISRAIIVVQMGMTPSAKQALVDMAPKYILEQFLESELLINITEHQLVPEHVVMTP 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
E+ LL ++ ++E QLPRI D + RY+GL++GQVVK+ E + ++++R
Sbjct: 154 EEKAELLARYRLKEHQLPRIQAGDPVARYFGLKRGQVVKIIRPSETAGRYISYR 207
[72][TOP]
>UniRef100_Q6CA26 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Yarrowia lipolytica RepID=RPAB1_YARLI
Length = 212
Score = 84.3 bits (207), Expect = 4e-15
Identities = 44/113 (38%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAI-ELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDE 275
+S+ + ILV +N++T A + I + ++ FQ TDLLVNIT+H L P H L+
Sbjct: 97 ISENKFATGILVYENNMTPSANRLIPSVAPATIDTFQETDLLVNITKHVLVPTHIKLSGA 156
Query: 274 DNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
+ LL+++ ++E QLPRI ++D + RY GL +GQ+VK+ R E S + ++R
Sbjct: 157 EKKFLLERYRLKESQLPRIQREDPVARYLGLRRGQIVKIIRRSETSGRYASYR 209
[73][TOP]
>UniRef100_C6K8L9 RNA polymerase II B subunit n=1 Tax=Caenorhabditis brenneri
RepID=C6K8L9_CAEBE
Length = 211
Score = 84.0 bits (206), Expect = 5e-15
Identities = 42/116 (36%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLND 278
+ ++ IS I+V+Q +T A ++I + + +E F +L+VNITEH L P+H V+
Sbjct: 95 MQEQNISRAIIVVQTGMTPSAKQSIGDMAPKYMLEHFLEAELMVNITEHELVPEHVVMTS 154
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ +++ QLPRI + D + RY+GL +GQVVK+ E + ++ +R V
Sbjct: 155 EEKAELLARYKLKDSQLPRIQQCDPVARYFGLRRGQVVKIIRPSETAGRYITYRLV 210
[74][TOP]
>UniRef100_UPI00004E3EE0 RNA polymerase II core subunit n=1 Tax=Dictyostelium discoideum AX4
RepID=UPI00004E3EE0
Length = 181
Score = 83.6 bits (205), Expect = 6e-15
Identities = 46/121 (38%), Positives = 70/121 (57%), Gaps = 5/121 (4%)
Frame = -1
Query: 457 DILSQETISGLILVLQNHVTNQALKAIELFS----FKVEIFQITDLLVNITEHSLKPQHQ 290
DI+ + I+V+Q ++T A +A+ FS +E F +LLVNIT H L P+H
Sbjct: 61 DIMKDRQANRAIIVVQQNITPFAKQALAEFSQEKKITLEQFNEAELLVNITHHQLVPKHI 120
Query: 289 VLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR-C 113
+L E+ LL ++ ++E QLPRI D + RYYGL +G VVK+ E + ++ +R C
Sbjct: 121 LLTKEEKLELLTRYKMKESQLPRIQTNDPVARYYGLSRGHVVKIVRPSETAGRYITYRLC 180
Query: 112 V 110
V
Sbjct: 181 V 181
[75][TOP]
>UniRef100_Q4XTK3 DNA-directed RNA polymerase 2, putative n=1 Tax=Plasmodium chabaudi
RepID=Q4XTK3_PLACH
Length = 126
Score = 83.6 bits (205), Expect = 6e-15
Identities = 47/116 (40%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +++I ILV QN +T A AI+ + + +E F T+LLVNIT+H L P+H L
Sbjct: 10 MDEKSIQRAILVTQNTLTPFAKDAIKEAAPRHIIENFLDTELLVNITKHELVPKHIPLTS 69
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++ LL+++ I+E +LPRI D + RY+GL KGQVVK+ E + +V +R V
Sbjct: 70 DEKRNLLQRYKIKENKLPRIQDVDPVCRYFGLSKGQVVKIIRPSETAGRYVTYRLV 125
[76][TOP]
>UniRef100_A7APR4 RNA polymerase Rpb5, N-terminal domain containing protein n=1
Tax=Babesia bovis RepID=A7APR4_BABBO
Length = 205
Score = 83.6 bits (205), Expect = 6e-15
Identities = 48/117 (41%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ I ILV QN +T A AI + + +E F T+LLVNIT+H L P+H L
Sbjct: 89 MEDHDIHRAILVTQNVLTPFAKDAILEAAPRNIIENFLETELLVNITKHELVPKHIPLTA 148
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCVW 107
++ TLL+++ ++E Q+PRI D + RY+GL KGQVVK+ E + +V FR V+
Sbjct: 149 DEKQTLLQRYKVKESQIPRIQAADPVARYFGLTKGQVVKIIRPSETAGRYVTFRLVY 205
[77][TOP]
>UniRef100_Q09191 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Schizosaccharomyces pombe RepID=RPAB1_SCHPO
Length = 210
Score = 83.6 bits (205), Expect = 6e-15
Identities = 43/105 (40%), Positives = 65/105 (61%), Gaps = 2/105 (1%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKK 251
IL+ N +T A K I + F +E FQ +DL+VNIT H L P+H +L+ ++ LL +
Sbjct: 103 ILIYANSMTPSAAKIIATVTGQFTIETFQESDLIVNITHHELVPKHILLSPDEKKELLDR 162
Query: 250 FSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
+ + E QLPRI D + RY GL++G+VVK+ R E S + ++R
Sbjct: 163 YKLRETQLPRIQLADPVARYLGLKRGEVVKIVRRSETSGRYNSYR 207
[78][TOP]
>UniRef100_Q54EH2 DNA-directed RNA polymerases I, II, and III subunit rpabc1 n=1
Tax=Dictyostelium discoideum RepID=RPAB1_DICDI
Length = 197
Score = 83.6 bits (205), Expect = 6e-15
Identities = 46/121 (38%), Positives = 70/121 (57%), Gaps = 5/121 (4%)
Frame = -1
Query: 457 DILSQETISGLILVLQNHVTNQALKAIELFS----FKVEIFQITDLLVNITEHSLKPQHQ 290
DI+ + I+V+Q ++T A +A+ FS +E F +LLVNIT H L P+H
Sbjct: 77 DIMKDRQANRAIIVVQQNITPFAKQALAEFSQEKKITLEQFNEAELLVNITHHQLVPKHI 136
Query: 289 VLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR-C 113
+L E+ LL ++ ++E QLPRI D + RYYGL +G VVK+ E + ++ +R C
Sbjct: 137 LLTKEEKLELLTRYKMKESQLPRIQTNDPVARYYGLSRGHVVKIVRPSETAGRYITYRLC 196
Query: 112 V 110
V
Sbjct: 197 V 197
[79][TOP]
>UniRef100_Q757H7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Eremothecium gossypii RepID=RPAB1_ASHGO
Length = 215
Score = 83.6 bits (205), Expect = 6e-15
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAI-ELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
I + QN +T ALK + + +E F T L+VNIT H L P+H L+DE+ LLK++
Sbjct: 109 IFIYQNGITPSALKLLPSVAPATIETFNETALVVNITHHELVPKHIKLSDEEKKELLKRY 168
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
++E QLPRI + D + Y GL++G+VVK+ + E S + ++R
Sbjct: 169 RLKESQLPRIQRMDPVALYLGLKRGEVVKIIRKSETSGRYASYR 212
[80][TOP]
>UniRef100_B3L6X3 DNA-directed RNA polymerase 2, putative n=1 Tax=Plasmodium knowlesi
strain H RepID=B3L6X3_PLAKH
Length = 205
Score = 83.2 bits (204), Expect = 8e-15
Identities = 47/116 (40%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +++I ILV QN +T A AI+ + + +E F T+LLVNIT+H L P+H L
Sbjct: 89 MDEKSIQRAILVTQNTLTPFARDAIKEAAPRHIIENFLDTELLVNITKHELVPRHIPLTS 148
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++ LL+++ I+E +LPRI D + RY+GL KGQVVK+ E + +V +R V
Sbjct: 149 DEKRNLLQRYKIKENKLPRIQDVDPVCRYFGLAKGQVVKIIRPSETAGRYVTYRLV 204
[81][TOP]
>UniRef100_A8XGH1 C. briggsae CBR-RPB-5 protein n=1 Tax=Caenorhabditis briggsae
RepID=A8XGH1_CAEBR
Length = 211
Score = 83.2 bits (204), Expect = 8e-15
Identities = 42/116 (36%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLND 278
+ ++ IS I+V+Q +T A ++I + + +E F +L+VNITEH L P+H V+
Sbjct: 95 MQEQNISRAIIVVQTGMTPSAKQSIGDMAPKYMLEHFLEAELMVNITEHELVPEHVVMTA 154
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ +++ QLPRI + D + RY+GL +GQVVK+ E + ++ +R V
Sbjct: 155 EEKAELLARYKLKDSQLPRIQQCDPVARYFGLRRGQVVKIIRPSETAGRYITYRLV 210
[82][TOP]
>UniRef100_A5K2Q3 DNA-directed RNA polymerase II 23 kDa polypeptide, putative n=1
Tax=Plasmodium vivax RepID=A5K2Q3_PLAVI
Length = 205
Score = 83.2 bits (204), Expect = 8e-15
Identities = 47/116 (40%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +++I ILV QN +T A AI+ + + +E F T+LLVNIT+H L P+H L
Sbjct: 89 MDEKSIQRAILVTQNTLTPFARDAIKEAAPRHIIENFLDTELLVNITKHELVPRHIPLTS 148
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++ LL+++ I+E +LPRI D + RY+GL KGQVVK+ E + +V +R V
Sbjct: 149 DEKRNLLQRYKIKENKLPRIQDVDPVCRYFGLAKGQVVKIIRPSETAGRYVTYRLV 204
[83][TOP]
>UniRef100_Q6BIJ0 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Debaryomyces hansenii RepID=RPAB1_DEBHA
Length = 214
Score = 83.2 bits (204), Expect = 8e-15
Identities = 44/113 (38%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS-FKVEIFQITDLLVNITEHSLKPQHQVLNDE 275
+S++ S I + Q+ +T A K I S +E FQ DL+VNIT H L P+H L +
Sbjct: 99 ISEKNFSTGIFIYQSSITPSANKLIPTVSPASIETFQEGDLVVNITHHDLVPKHIKLARD 158
Query: 274 DNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
+ LL+++ ++E QLPRI ++D + RY GL++G+VVK+ R E S + ++R
Sbjct: 159 EKKELLERYRLKESQLPRIQREDPVGRYLGLKRGEVVKIIRRSETSGRYASYR 211
[84][TOP]
>UniRef100_Q9N5K2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Caenorhabditis elegans RepID=RPAB1_CAEEL
Length = 211
Score = 83.2 bits (204), Expect = 8e-15
Identities = 42/116 (36%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLND 278
+ ++ IS I+V+Q +T A ++I + + +E F +L+VNITEH L P+H V+
Sbjct: 95 MQEQNISRAIIVVQTGMTPSAKQSIGDMAPKYMLEHFLEAELMVNITEHELVPEHVVMTA 154
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ +++ QLPRI + D + RY+GL +GQVVK+ E + ++ +R V
Sbjct: 155 EEKAELLARYKLKDSQLPRIQQCDPVARYFGLRRGQVVKIIRPSETAGRYITYRLV 210
[85][TOP]
>UniRef100_UPI000180C3C9 PREDICTED: similar to 25-kDa subunit RNA polymerase n=1 Tax=Ciona
intestinalis RepID=UPI000180C3C9
Length = 210
Score = 82.8 bits (203), Expect = 1e-14
Identities = 44/116 (37%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I I+V+Q +T A +++ + K +E F +LL+NITEH L P+H VL
Sbjct: 94 MQEENIQRAIIVVQQSMTPSAKQSLFDMAPKYILEQFLEQELLINITEHELVPEHVVLTP 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ +++ QLPRI D + RY+GL++GQVVK+ E + +V +R V
Sbjct: 154 EEKSELLTRYKLKDHQLPRIQAGDPVARYFGLKRGQVVKIVRPSETAGRYVTYRLV 209
[86][TOP]
>UniRef100_Q8ID59 DNA-directed RNA polymerase 2, putative n=1 Tax=Plasmodium
falciparum 3D7 RepID=Q8ID59_PLAF7
Length = 205
Score = 82.4 bits (202), Expect = 1e-14
Identities = 47/116 (40%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +++I ILV QN +T A AI+ + + +E F T+LLVNIT+H L P+H L
Sbjct: 89 MEEKSIQRAILVTQNILTPFARDAIKEAAPRHIIENFLDTELLVNITKHELVPRHIPLTS 148
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++ LL+++ I E +LPRI D + RY+GL KGQVVK+ E + +V +R V
Sbjct: 149 DEKKNLLQRYKIMENKLPRIQDVDPVCRYFGLSKGQVVKIIRPSETAGRYVTYRLV 204
[87][TOP]
>UniRef100_A6N9W6 25-kDa subunit RNA polymerase n=1 Tax=Ornithodoros parkeri
RepID=A6N9W6_ORNPR
Length = 210
Score = 82.4 bits (202), Expect = 1e-14
Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ I+V+Q +T A +A+ + K +E F ++LL+NITEH L P+H VL
Sbjct: 94 MQEENITRAIIVVQQGMTPSAKQALTDMAPKYILEYFLESELLINITEHELVPEHVVLTP 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ ++E L RI D + RY+GL++GQVVK+ E + ++++R V
Sbjct: 154 EEKAELLARYKLKENHLMRIQAGDPVARYFGLKRGQVVKIIRPSETAGRYISYRLV 209
[88][TOP]
>UniRef100_A4QW70 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea
RepID=A4QW70_MAGGR
Length = 259
Score = 82.4 bits (202), Expect = 1e-14
Identities = 44/117 (37%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Frame = -1
Query: 457 DILSQETISGLILVLQNHVTNQALKAIELFSF---KVEIFQITDLLVNITEHSLKPQHQV 287
++L Q ILV Q +++ A +A+ KVE F + DLLVNIT H L P+H +
Sbjct: 111 EVLLQSGFRDGILVTQGALSSGARRALSATGSGDNKVEAFMLEDLLVNITHHELVPKHVM 170
Query: 286 LNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
L+ + LL+++ ++E QLPRI KD + RY GL++G VVK+ E + + ++R
Sbjct: 171 LSRVEKKALLERYRLKETQLPRIQTKDPVARYLGLQRGNVVKIIRHSETAGRYASYR 227
[89][TOP]
>UniRef100_UPI000186E78B DNA-directed RNA polymerase II 23 kDa polypeptide, putative n=1
Tax=Pediculus humanus corporis RepID=UPI000186E78B
Length = 210
Score = 82.0 bits (201), Expect = 2e-14
Identities = 42/116 (36%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I I+V+Q +T A +++ + K +E F ++LL+NITEH L P+H V+
Sbjct: 94 MQEENIHRAIIVVQQGMTPSAKQSLSDMAPKYILEQFLESELLINITEHELVPEHVVMTP 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL+++ ++E QL RI D + RY+GL++GQVVK+ E + ++++R V
Sbjct: 154 EEKQELLQRYKLKENQLMRIQAGDPVARYFGLKRGQVVKIVRPSETAGRYISYRLV 209
[90][TOP]
>UniRef100_B6KFE7 DNA-directed RNA polymerases I, II, and III subunit RPABC1,
putative n=3 Tax=Toxoplasma gondii RepID=B6KFE7_TOXGO
Length = 205
Score = 81.6 bits (200), Expect = 2e-14
Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ + I ILV QN +T A AI + + +E F ++LLVNIT+H L P+H L +
Sbjct: 89 MEERNIQRAILVTQNVLTAFARDAISEAAPRHIIENFMESELLVNITKHELVPKHVPLTN 148
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++ LL ++ ++E QLPRI D + RY+GL +GQVVK+ E + +V +R V
Sbjct: 149 DEKQNLLNRYRVKEIQLPRIQSADPVARYFGLSRGQVVKIIRPSETAGRYVTYRLV 204
[91][TOP]
>UniRef100_Q2H038 Putative uncharacterized protein n=1 Tax=Chaetomium globosum
RepID=Q2H038_CHAGB
Length = 220
Score = 81.6 bits (200), Expect = 2e-14
Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKK 251
ILV ++ QA K + + S +E F DLLVNIT H L P+H +L+ E+ LLK+
Sbjct: 113 ILVTAVALSAQARKVMTVTSQYTLIECFLEEDLLVNITHHELVPKHVLLSREEKTALLKR 172
Query: 250 FSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR-CV 110
+ ++E QLPRI KD I RY GL+KGQVVK+ E + + ++R CV
Sbjct: 173 YRLKETQLPRILSKDPIARYLGLKKGQVVKIIRTSETAGRYASYRLCV 220
[92][TOP]
>UniRef100_C5DNB3 KLTH0G15598p n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DNB3_LACTC
Length = 215
Score = 81.6 bits (200), Expect = 2e-14
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAI-ELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDE 275
+S++ I V QN VT A+K + + +E F L+VNIT H L P+H L+DE
Sbjct: 100 ISEKNFQTGIFVYQNGVTPSAMKLLPSVAPATIETFHEASLVVNITHHELVPKHIKLSDE 159
Query: 274 DNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
+ LL+++ ++E QLPRI + D + Y GL++G VVK+ + E S + ++R
Sbjct: 160 EKKELLRRYRLKESQLPRIQRMDPVALYLGLKRGDVVKIIRKSETSGRYASYR 212
[93][TOP]
>UniRef100_UPI000056951D UPI000056951D related cluster n=1 Tax=Danio rerio
RepID=UPI000056951D
Length = 211
Score = 81.3 bits (199), Expect = 3e-14
Identities = 42/116 (36%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ ++V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 95 MQEENITRAVIVVQTGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHIVMTK 154
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ ++E QLPRI D + RY+GL++GQVVK+ E + ++ +R V
Sbjct: 155 EEVTELLARYKLKETQLPRIQCSDPVARYFGLKRGQVVKIIRPSETAGRYITYRLV 210
[94][TOP]
>UniRef100_Q6DEG5 Polymerase (RNA) II (DNA directed) polypeptide E n=1 Tax=Danio
rerio RepID=Q6DEG5_DANRE
Length = 210
Score = 81.3 bits (199), Expect = 3e-14
Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ I+V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 94 MQEENITRAIIVVQMGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHIVMTK 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ ++E QLPRI D + RY+GL++GQVVK+ E + ++ +R V
Sbjct: 154 EEVTELLARYKLKESQLPRIQAGDPVARYFGLKRGQVVKIIRPSETAGRYITYRLV 209
[95][TOP]
>UniRef100_Q4S3C9 Chromosome 1 SCAF14751, whole genome shotgun sequence n=1
Tax=Tetraodon nigroviridis RepID=Q4S3C9_TETNG
Length = 210
Score = 81.3 bits (199), Expect = 3e-14
Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ I+V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 94 MQEENITRAIIVVQMGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHIVMTK 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ ++E QLPRI D + RY+GL++GQVVK+ E + ++ +R V
Sbjct: 154 EEVTELLARYKLKESQLPRIQAGDPVARYFGLKRGQVVKIIRPSETAGRYITYRLV 209
[96][TOP]
>UniRef100_C3KI95 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Anoplopoma fimbria RepID=C3KI95_9PERC
Length = 210
Score = 81.3 bits (199), Expect = 3e-14
Identities = 43/116 (37%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ I+V+Q +T A +++ + K +E F +LL+NITEH L P+H V++
Sbjct: 94 MQEENITRAIIVVQMGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHIVMSK 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ ++E QLPRI D + RY+GL++GQVVK+ E + ++ +R V
Sbjct: 154 EEVVELLARYKLKESQLPRIQAGDPVARYFGLKRGQVVKIIRPSETAGRYITYRLV 209
[97][TOP]
>UniRef100_C1BIS3 DNA-directed RNA polymerase II 23 kDa polypeptide n=1 Tax=Osmerus
mordax RepID=C1BIS3_OSMMO
Length = 210
Score = 81.3 bits (199), Expect = 3e-14
Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ I+V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 94 MQEENITRAIIVVQMGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHIVMTK 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ ++E QLPRI D + RY+GL++GQVVK+ E + ++ +R V
Sbjct: 154 EELSELLTRYKLKESQLPRIQAGDPVARYFGLKRGQVVKIIRPSETAGRYITYRLV 209
[98][TOP]
>UniRef100_C4WY48 ACYPI000388 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WY48_ACYPI
Length = 210
Score = 81.3 bits (199), Expect = 3e-14
Identities = 43/116 (37%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +ETI+ I+V+Q +T A +++ + K +E F ++LL+NITEH L P+H VL
Sbjct: 94 MQEETITRAIIVVQQGMTPSAKQSLVDMAPKYILEQFLESELLINITEHELVPEHIVLTP 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++ LL ++ ++E QL RI D + RY+GL++GQVVK+ E + ++++R V
Sbjct: 154 DEKQELLCRYKLKENQLMRIQVGDPVSRYFGLKRGQVVKIVRNSETAGRYISYRLV 209
[99][TOP]
>UniRef100_B3S3Q9 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3S3Q9_TRIAD
Length = 210
Score = 81.3 bits (199), Expect = 3e-14
Identities = 39/116 (33%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ I+++Q+ +T A +++ + + +E F ++L++NITEH L P+H V++
Sbjct: 94 MQRENINRAIIIIQSGMTPTAKQSLIDMAPKYTLESFMESELMINITEHHLVPKHIVMSP 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ ++E QLPRI D + RYYGL++GQ V++ E + ++ +R V
Sbjct: 154 EEKAELLARYKLKEHQLPRIQVGDPVARYYGLKRGQFVRIIRPSETAGRYITYRLV 209
[100][TOP]
>UniRef100_A7RT72 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RT72_NEMVE
Length = 207
Score = 81.3 bits (199), Expect = 3e-14
Identities = 41/116 (35%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E IS ++V+Q +T A +A+ + K +E F +L++NITEH L P+H ++
Sbjct: 91 MQEENISRAVIVVQLGMTPSAKQALVDMAPKYILEQFVEAELMINITEHELVPEHVLMTP 150
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++ LL ++ ++E QLPRI D + RY+GL++GQVVK+ E + ++ +R V
Sbjct: 151 DEKQELLLRYKLKEHQLPRIQSGDPVARYFGLKRGQVVKIIRPSETAGRYITYRLV 206
[101][TOP]
>UniRef100_C1C3Q7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Rana catesbeiana RepID=C1C3Q7_RANCA
Length = 210
Score = 80.9 bits (198), Expect = 4e-14
Identities = 42/116 (36%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ I+V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 94 MQEENITRAIIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTK 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++ LL ++ + E QLPRI D + RY+GL++GQVVK+ E + ++ +R V
Sbjct: 154 DEVTELLARYKLRESQLPRIQAGDPVARYFGLKRGQVVKIIRPSETAGRYITYRLV 209
[102][TOP]
>UniRef100_Q6FQA6 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Candida glabrata RepID=RPAB1_CANGA
Length = 215
Score = 80.9 bits (198), Expect = 4e-14
Identities = 39/104 (37%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAI-ELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
I + QN++T A+K + + +E F L+VNIT H L P+H LN+E+ LLK++
Sbjct: 109 IFIYQNNITPSAMKLVPSIPPATIETFHEAALVVNITHHDLVPKHIRLNEEEKAELLKRY 168
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
++E QLPRI + D + Y GL++G+VVK+ + E + + ++R
Sbjct: 169 RLKESQLPRIQRADPVALYLGLKRGEVVKIIRKSETAGRYASYR 212
[103][TOP]
>UniRef100_UPI00015B5456 PREDICTED: similar to ENSANGP00000006082 n=1 Tax=Nasonia
vitripennis RepID=UPI00015B5456
Length = 210
Score = 80.5 bits (197), Expect = 5e-14
Identities = 42/116 (36%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I I+V+Q+ +T A +++ + K +E F ++LL+NITEH L P+H VL
Sbjct: 94 MQEEKIHRAIIVVQSGMTPSAKQSLVDMAPKYILEQFLESELLINITEHELVPEHIVLTP 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++ LL ++ ++E QL RI D + RY+GL++GQVVK+ E + ++++R V
Sbjct: 154 DEKEELLTRYKLKENQLMRIQANDPVARYFGLKRGQVVKIIRPSETAGRYISYRLV 209
[104][TOP]
>UniRef100_UPI0000E24E5A PREDICTED: similar to Polymerase (RNA) II (DNA directed)
polypeptide E, 25kDa n=1 Tax=Pan troglodytes
RepID=UPI0000E24E5A
Length = 230
Score = 80.5 bits (197), Expect = 5e-14
Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ ++V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 114 MQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTK 173
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ + E QLPRI D + RY+G+++GQVVK+ E + ++ +R V
Sbjct: 174 EEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLV 229
[105][TOP]
>UniRef100_B5FX59 Putative DNA directed RNA polymerase II polypeptide E n=2
Tax=Neognathae RepID=B5FX59_TAEGU
Length = 210
Score = 80.5 bits (197), Expect = 5e-14
Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ ++V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 94 MQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTK 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ + E QLPRI D + RY+G+++GQVVK+ E + ++ +R V
Sbjct: 154 EEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLV 209
[106][TOP]
>UniRef100_B4DJ89 cDNA FLJ55074, highly similar to DNA-directed RNA polymerase II 23
kDa polypeptide (EC 2.7.7.6) n=1 Tax=Homo sapiens
RepID=B4DJ89_HUMAN
Length = 117
Score = 80.5 bits (197), Expect = 5e-14
Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ ++V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 1 MQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTK 60
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ + E QLPRI D + RY+G+++GQVVK+ E + ++ +R V
Sbjct: 61 EEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLV 116
[107][TOP]
>UniRef100_Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Pongo abelii RepID=RPAB1_PONAB
Length = 210
Score = 80.5 bits (197), Expect = 5e-14
Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ ++V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 94 MQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTK 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ + E QLPRI D + RY+G+++GQVVK+ E + ++ +R V
Sbjct: 154 EEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLV 209
[108][TOP]
>UniRef100_Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=3
Tax=Murinae RepID=RPAB1_MOUSE
Length = 210
Score = 80.5 bits (197), Expect = 5e-14
Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ ++V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 94 MQEENITRALIVVQQGMTPSAKQSLVDMAPKYVLEQFLQQELLINITEHELVPEHVVMTK 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ + E QLPRI D + RY+G+++GQVVK+ E + ++ +R V
Sbjct: 154 EEVTELLARYKLRESQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLV 209
[109][TOP]
>UniRef100_P19388 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Homo sapiens RepID=RPAB1_HUMAN
Length = 210
Score = 80.5 bits (197), Expect = 5e-14
Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ ++V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 94 MQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTK 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ + E QLPRI D + RY+G+++GQVVK+ E + ++ +R V
Sbjct: 154 EEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLV 209
[110][TOP]
>UniRef100_Q2T9T3 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Bos taurus RepID=RPAB1_BOVIN
Length = 210
Score = 80.5 bits (197), Expect = 5e-14
Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ ++V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 94 MQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTK 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ + E QLPRI D + RY+G+++GQVVK+ E + ++ +R V
Sbjct: 154 EEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLV 209
[111][TOP]
>UniRef100_Q28HF5 Polymerase (RNA) II (DNA directed) polypeptide E n=2 Tax=Xenopus
RepID=Q28HF5_XENTR
Length = 210
Score = 80.1 bits (196), Expect = 7e-14
Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ ++V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 94 MQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTK 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++ LL ++ + E QLPRI D + RY+GL++GQVVK+ E + ++ +R V
Sbjct: 154 DEVTELLARYKLRESQLPRIQAGDPVARYFGLKRGQVVKIIRPSETAGRYITYRLV 209
[112][TOP]
>UniRef100_B4KPZ3 GI19761 n=2 Tax=Drosophila RepID=B4KPZ3_DROMO
Length = 210
Score = 80.1 bits (196), Expect = 7e-14
Identities = 42/116 (36%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I I+V+Q +T A +++ + K +E F ++LL+NITEH L P+H V+
Sbjct: 94 MQEENIHRAIVVVQGGMTPSAKQSLVDMAPKYILEQFLESELLINITEHELVPEHVVMTA 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
ED LL ++ ++E L RI D + RY+GL++GQVVK+ E + ++++R V
Sbjct: 154 EDKQELLSRYKLKENMLMRIQAGDPVARYFGLKRGQVVKIIRSSETAGRYISYRLV 209
[113][TOP]
>UniRef100_B4J892 GH20567 n=1 Tax=Drosophila grimshawi RepID=B4J892_DROGR
Length = 210
Score = 80.1 bits (196), Expect = 7e-14
Identities = 42/116 (36%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I I+V+Q +T A +++ + K +E F ++LL+NITEH L P+H V+
Sbjct: 94 MQEENIHRAIVVVQGGMTPSAKQSLVDMAPKYILEQFLESELLINITEHELVPEHVVMTA 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
ED LL ++ ++E L RI D + RY+GL++GQVVK+ E + ++++R V
Sbjct: 154 EDKQELLSRYKLKENMLMRIQAGDPVARYFGLKRGQVVKIIRSSETAGRYISYRLV 209
[114][TOP]
>UniRef100_Q7S8Z5 DNA-directed RNA polymerases II 24 kDa polypeptide n=1
Tax=Neurospora crassa RepID=Q7S8Z5_NEUCR
Length = 234
Score = 80.1 bits (196), Expect = 7e-14
Identities = 45/98 (45%), Positives = 63/98 (64%), Gaps = 3/98 (3%)
Frame = -1
Query: 394 QALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPR 221
QA K + + S +VE F DLLVNIT H L P+H +L+ E+ LLK++ ++E QLPR
Sbjct: 137 QARKVMSVTSQYTQVECFLEEDLLVNITHHELVPKHVLLSKEEKAALLKRYRLKETQLPR 196
Query: 220 ISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR-CV 110
I KD I RY GL++GQVVK+ E + + ++R CV
Sbjct: 197 ILSKDPIARYLGLKRGQVVKIIRVSETAGRYASYRLCV 234
[115][TOP]
>UniRef100_B5X957 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=2
Tax=Euteleostei RepID=B5X957_SALSA
Length = 210
Score = 79.7 bits (195), Expect = 9e-14
Identities = 42/116 (36%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ +V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 94 MQEENITRACIVVQMGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHIVMTK 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ ++E QLPRI + D + RY+GL++GQVVK+ E + ++ +R V
Sbjct: 154 EELSELLLRYKLKESQLPRIQQGDPVARYFGLKRGQVVKIIRPSETAGRYITYRLV 209
[116][TOP]
>UniRef100_C7Z7I7 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7Z7I7_NECH7
Length = 234
Score = 79.7 bits (195), Expect = 9e-14
Identities = 40/96 (41%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Frame = -1
Query: 394 QALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRIS 215
++L ++E + K+E F DLLVNIT H L P+H +L+ ++ LLK++ ++E QLPRI
Sbjct: 140 KSLASVESLA-KIECFLEDDLLVNITHHELVPKHVLLSRDEKTALLKRYRLKETQLPRIL 198
Query: 214 KKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR-CV 110
++D + RY GL++GQVVK+ E + + ++R CV
Sbjct: 199 QRDPVARYLGLKRGQVVKIIRNSETAGRYASYRLCV 234
[117][TOP]
>UniRef100_A2QAL5 Catalytic activity: Nucleoside triphosphate + RNA(n) =
Pyrophosphate + RNA(n+1) n=1 Tax=Aspergillus niger CBS
513.88 RepID=A2QAL5_ASPNC
Length = 235
Score = 79.7 bits (195), Expect = 9e-14
Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
+ + Q ++ A++ + ++ E FQ DLLVNIT H L P+H +L+ ++ LL+++
Sbjct: 129 VFITQTPISPSAVRLLSSMPGRICEHFQEQDLLVNITRHELVPKHVLLSPDEKARLLERY 188
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++E QLPRI D + RY GL +GQVVK+ R E + + ++R V
Sbjct: 189 RLKESQLPRIQVSDPVARYLGLRRGQVVKIIRRSETAGRYASYRWV 234
[118][TOP]
>UniRef100_UPI00003C0CAC PREDICTED: similar to Rpb5 CG11979-PA n=1 Tax=Apis mellifera
RepID=UPI00003C0CAC
Length = 210
Score = 79.3 bits (194), Expect = 1e-13
Identities = 42/116 (36%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I I+V+Q +T A +++ + K +E F ++LL+NITEH L P+H VL
Sbjct: 94 MQEEKIHRAIIVVQQGMTPSAKQSLVDMAPKYILEQFLESELLINITEHELVPEHIVLTP 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++ LL ++ ++E QL RI D + RY+GL++GQVVK+ E + ++++R V
Sbjct: 154 DEKEELLTRYKLKENQLMRIQAGDPVARYFGLKRGQVVKIIRPSETAGRYISYRLV 209
[119][TOP]
>UniRef100_UPI000023E584 hypothetical protein FG09748.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023E584
Length = 253
Score = 79.3 bits (194), Expect = 1e-13
Identities = 42/115 (36%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Frame = -1
Query: 454 ILSQETISGLIL--VLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQVLN 281
++S +G+++ V + ++L ++E + K+E F DLLVNIT H L P+H +L+
Sbjct: 122 VISNNYKTGIMITHVPLSPAARRSLASVESLA-KIECFLEDDLLVNITHHELVPKHVLLS 180
Query: 280 DEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
E+ LLK++ ++E QLPRI +KD + RY GL++G VVK+ E + + ++R
Sbjct: 181 REEKIALLKRYRLKETQLPRILQKDPVARYLGLKRGHVVKIIRNSETAGRYASYR 235
[120][TOP]
>UniRef100_Q6MY78 DNA-directed RNA polymerase, putative n=1 Tax=Aspergillus fumigatus
RepID=Q6MY78_ASPFU
Length = 220
Score = 79.3 bits (194), Expect = 1e-13
Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
+ + Q ++ A++ + ++ E FQ DLLVNIT H L P+H +L+ E+ LL+++
Sbjct: 114 VFITQTPISPSAVRLLSGIPGRICEHFQEQDLLVNITRHELVPKHVLLSPEEKKNLLQRY 173
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++E QLPRI D + RY GL +GQVVK+ + E + + ++R V
Sbjct: 174 RLKESQLPRIQVSDPVARYLGLRRGQVVKIIRKSETAGRYASYRWV 219
[121][TOP]
>UniRef100_B0XMP1 RNA polymerase subunit n=2 Tax=Aspergillus fumigatus
RepID=B0XMP1_ASPFC
Length = 171
Score = 79.3 bits (194), Expect = 1e-13
Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
+ + Q ++ A++ + ++ E FQ DLLVNIT H L P+H +L+ E+ LL+++
Sbjct: 65 VFITQTPISPSAVRLLSGIPGRICEHFQEQDLLVNITRHELVPKHVLLSPEEKKNLLQRY 124
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++E QLPRI D + RY GL +GQVVK+ + E + + ++R V
Sbjct: 125 RLKESQLPRIQVSDPVARYLGLRRGQVVKIIRKSETAGRYASYRWV 170
[122][TOP]
>UniRef100_A1D205 RNA polymerase subunit n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D205_NEOFI
Length = 234
Score = 79.3 bits (194), Expect = 1e-13
Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
+ + Q ++ A++ + ++ E FQ DLLVNIT H L P+H +L+ E+ LL+++
Sbjct: 128 VFITQTPISPSAVRLLSGIPGRICEHFQEQDLLVNITRHELVPKHVLLSPEEKKNLLQRY 187
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++E QLPRI D + RY GL +GQVVK+ + E + + ++R V
Sbjct: 188 RLKESQLPRIQVSDPVARYLGLRRGQVVKIIRKSETAGRYASYRWV 233
[123][TOP]
>UniRef100_A1CP51 RNA polymerase subunit n=1 Tax=Aspergillus clavatus
RepID=A1CP51_ASPCL
Length = 234
Score = 79.3 bits (194), Expect = 1e-13
Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
+ + Q ++ A++ + ++ E FQ DLLVNIT H L P+H +L+ E+ LL+++
Sbjct: 128 VFITQTPISPSAVRLLSGIPGRICEHFQEQDLLVNITRHELVPKHVLLSPEEKKNLLQRY 187
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++E QLPRI D + RY GL +GQVVK+ + E + + ++R V
Sbjct: 188 RLKESQLPRIQVSDPVARYLGLRRGQVVKIIRKSETAGRYASYRWV 233
[124][TOP]
>UniRef100_UPI0000587A08 PREDICTED: similar to RPB5 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000587A08
Length = 210
Score = 79.0 bits (193), Expect = 2e-13
Identities = 40/116 (34%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ I+ +Q +T A ++ + K +E F +LL+NITEH P+H V+
Sbjct: 94 MQEENITRAIITVQEKMTPSAKTSLGDMAPKYILEQFLEAELLINITEHDFVPEHVVMTG 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ +++ QLPRI D + RY+GL++GQVVK+ E + ++++R V
Sbjct: 154 EEKAELLARYKLKDHQLPRIQVGDPVARYFGLKRGQVVKIIRPSETAGRYISYRLV 209
[125][TOP]
>UniRef100_C1BZT4 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Esox lucius RepID=C1BZT4_ESOLU
Length = 210
Score = 79.0 bits (193), Expect = 2e-13
Identities = 42/116 (36%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ +V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 94 MQEENITRACIVVQMGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHIVMTK 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ ++E QLPRI D + RY+GL++GQVVK+ E + ++ +R V
Sbjct: 154 EELSELLLRYKLKESQLPRIQAGDPVARYFGLKRGQVVKIIRPSETAGRYITYRLV 209
[126][TOP]
>UniRef100_B5X8S7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Salmo salar RepID=B5X8S7_SALSA
Length = 210
Score = 79.0 bits (193), Expect = 2e-13
Identities = 42/116 (36%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ +V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 94 MQEENITRACIVVQMGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHIVMTK 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ ++E QLPRI D + RY+GL++GQVVK+ E + ++ +R V
Sbjct: 154 EELSELLLRYKLKESQLPRIQAGDPVARYFGLKRGQVVKIIRPSETAGRYITYRLV 209
[127][TOP]
>UniRef100_B8N6W2 RNA polymerase subunit n=1 Tax=Aspergillus flavus NRRL3357
RepID=B8N6W2_ASPFN
Length = 171
Score = 79.0 bits (193), Expect = 2e-13
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
+ + Q ++ A++ + ++ E FQ DLLVNIT H L P+H +L+ E+ LL ++
Sbjct: 65 VFITQTPISPSAVRLLSGVPGRICEHFQEQDLLVNITRHELVPKHVLLSPEEKAKLLARY 124
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++E QLPRI D + RY GL +GQVVK+ R E + + ++R V
Sbjct: 125 RLKESQLPRIQVSDPVARYLGLRRGQVVKIIRRSETAGRYASYRWV 170
[128][TOP]
>UniRef100_A7TEH4 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
DSM 70294 RepID=A7TEH4_VANPO
Length = 215
Score = 79.0 bits (193), Expect = 2e-13
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAI-ELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
I V Q +VT A+K + + +E F L+VNIT H L P+H L++ + LLKK+
Sbjct: 109 IFVYQTNVTPSAMKLVPSIPPATIETFHEASLIVNITHHELVPKHIRLSENEKKELLKKY 168
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
++E QLPRI + D + Y GL++G+VVK+ + E S + ++R
Sbjct: 169 RLKESQLPRIQRADPVALYLGLKRGEVVKIIRKSETSGRYASYR 212
[129][TOP]
>UniRef100_B4MK71 GK20665 n=1 Tax=Drosophila willistoni RepID=B4MK71_DROWI
Length = 210
Score = 78.6 bits (192), Expect = 2e-13
Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I I+V+Q +T A +++ + K +E F ++LL+NITEH L P+H V+
Sbjct: 94 MQEENIHRAIVVVQGGMTPSAKQSLVDMAPKYILEQFLESELLINITEHDLVPEHVVMTA 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ ++E L RI D + RY+GL++GQVVK+ E + ++++R V
Sbjct: 154 EEKQELLSRYKLKENMLMRIQAGDPVARYFGLKRGQVVKIIRASETAGRYISYRLV 209
[130][TOP]
>UniRef100_B3MEP0 GF12445 n=1 Tax=Drosophila ananassae RepID=B3MEP0_DROAN
Length = 210
Score = 78.6 bits (192), Expect = 2e-13
Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I I+V+Q +T A +++ + K +E F ++LL+NITEH L P+H V+
Sbjct: 94 MQEENIHRAIVVVQGGMTPSAKQSLVDMAPKYILEQFLESELLINITEHELVPEHVVMTA 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ ++E L RI D + RY+GL++GQVVK+ E + ++++R V
Sbjct: 154 EEKQELLSRYKLKENMLMRIQAGDPVARYFGLKRGQVVKIIRSSETAGRYISYRLV 209
[131][TOP]
>UniRef100_C9S900 DNA-directed RNA polymerases I n=1 Tax=Verticillium albo-atrum
VaMs.102 RepID=C9S900_9PEZI
Length = 231
Score = 78.6 bits (192), Expect = 2e-13
Identities = 41/105 (39%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAI-ELFSF-KVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKK 251
I+V + +T+ K + L SF ++E F DLLVNIT H L P+H +L+ ++ LLK+
Sbjct: 124 IMVTSSPLTSAGRKQLLSLESFARIECFLEEDLLVNITHHELVPKHILLSTDEKAALLKR 183
Query: 250 FSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
+ ++E QLPRI ++D + RY GL++G VVK+ E + + ++R
Sbjct: 184 YRLKETQLPRIKREDPVARYLGLKRGNVVKIIRNSETAGRYASYR 228
[132][TOP]
>UniRef100_C5DR69 ZYRO0B06006p n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DR69_ZYGRC
Length = 215
Score = 78.6 bits (192), Expect = 2e-13
Identities = 39/104 (37%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAI-ELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
I V QN+VT A+K + + +E F L+VNIT H L P+H ++++ LLK++
Sbjct: 109 IFVYQNNVTPSAMKLVPSIPPATIETFHEASLVVNITHHELVPKHIRFSEDEKRELLKRY 168
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
++E QLPRI + D + Y GL++G+VVK+ + E S + ++R
Sbjct: 169 RLKESQLPRIQRADPVALYLGLKRGEVVKIIRKSETSGRYASYR 212
[133][TOP]
>UniRef100_B6HAG0 Pc16g12690 protein n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6HAG0_PENCW
Length = 234
Score = 78.6 bits (192), Expect = 2e-13
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
I + Q ++ A++ + ++ E FQ DLLVNIT H L P+H +L+ E+ LL+++
Sbjct: 128 IFITQTPISPSAVRLLSGVPGRICEHFQEQDLLVNITRHELVPKHVLLSPEEKAKLLERY 187
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++E QLPRI D + RY GL +GQVVK+ + E + + ++R V
Sbjct: 188 RLKESQLPRIQISDPVARYLGLRRGQVVKIIRKSETAGRYASYRWV 233
[134][TOP]
>UniRef100_B2AZ24 Predicted CDS Pa_3_3870 n=1 Tax=Podospora anserina
RepID=B2AZ24_PODAN
Length = 235
Score = 78.6 bits (192), Expect = 2e-13
Identities = 47/108 (43%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKK 251
ILV ++ QA K + + S +E F DLLVNIT H L P H +L+ E+ LLK+
Sbjct: 128 ILVTAVALSAQARKVMTVTSQYTLIECFLEEDLLVNITHHELVPTHILLSREEKMALLKR 187
Query: 250 FSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR-CV 110
+ ++E QLPRI +KD I RY GL++GQVVK+ E + + ++R CV
Sbjct: 188 YRLKETQLPRILQKDPIARYLGLKRGQVVKIVRISETAGRYASYRLCV 235
[135][TOP]
>UniRef100_C5YQI4 Putative uncharacterized protein Sb08g001130 n=1 Tax=Sorghum
bicolor RepID=C5YQI4_SORBI
Length = 274
Score = 78.2 bits (191), Expect = 3e-13
Identities = 34/82 (41%), Positives = 53/82 (64%)
Frame = -1
Query: 352 IFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKG 173
+F + LVNIT+H LKP+H+VL E+ L K +++ + LP + + DA+ Y G +G
Sbjct: 193 LFNVRSRLVNITKHVLKPKHEVLTVEEKVKLQKDYNVVDSHLPLMLESDAVAHYQGFRQG 252
Query: 172 QVVKVNYRGELSESHVAFRCVW 107
VVKV Y EL+ +HV +RC++
Sbjct: 253 TVVKVTYDNELTGNHVTYRCIF 274
[136][TOP]
>UniRef100_B5DLL1 GA22602 n=2 Tax=pseudoobscura subgroup RepID=B5DLL1_DROPS
Length = 210
Score = 78.2 bits (191), Expect = 3e-13
Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I I+V+Q +T A +++ + K +E F ++LL+NITEH L P+H V+
Sbjct: 94 MQEENIHRAIVVVQGGMTPSAKQSLVDMAPKYILEQFLESELLINITEHELVPEHVVMTV 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ ++E L RI D + RY+GL++GQVVK+ E + ++++R V
Sbjct: 154 EEKQELLSRYKLKENMLMRIQAGDPVARYFGLKRGQVVKIIRSSETAGRYISYRLV 209
[137][TOP]
>UniRef100_Q7JZF5 Rpb5 n=5 Tax=melanogaster subgroup RepID=Q7JZF5_DROME
Length = 210
Score = 78.2 bits (191), Expect = 3e-13
Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I I+V+Q +T A +++ + K +E F ++LL+NITEH L P+H V+
Sbjct: 94 MQEENIHRAIVVVQGGMTPSAKQSLVDMAPKYILEQFLESELLINITEHELVPEHVVMTV 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ ++E L RI D + RY+GL++GQVVK+ E + ++++R V
Sbjct: 154 EEKQELLSRYKLKENMLMRIQAGDPVARYFGLKRGQVVKIIRSSETAGRYISYRLV 209
[138][TOP]
>UniRef100_Q5KN51 DNA-directed RNA polymerases ii 24 kDa polypeptide, putative n=1
Tax=Filobasidiella neoformans RepID=Q5KN51_CRYNE
Length = 221
Score = 78.2 bits (191), Expect = 3e-13
Identities = 34/83 (40%), Positives = 56/83 (67%)
Frame = -1
Query: 364 FKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYG 185
+ +E F +DLLVNIT+H L P+H V+ E+ L+K++ ++E QLPRI D + +YYG
Sbjct: 136 YHLEDFPESDLLVNITKHFLVPKHTVMKPEEKSALIKRYRLKETQLPRIMITDPVAKYYG 195
Query: 184 LEKGQVVKVNYRGELSESHVAFR 116
L++GQV+K+ E + ++ +R
Sbjct: 196 LKRGQVMKIERASETAGRYITYR 218
[139][TOP]
>UniRef100_Q0D0C1 DNA-directed RNA polymerases II 24 kDa polypeptide n=1
Tax=Aspergillus terreus NIH2624 RepID=Q0D0C1_ASPTN
Length = 219
Score = 78.2 bits (191), Expect = 3e-13
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
I + Q ++ A++ + ++ E FQ DLLVNIT H L P+H +L+ E+ LL ++
Sbjct: 113 IFITQTPISPSAVRLLSGVPGRICEHFQEQDLLVNITRHELVPKHVLLSPEEKKRLLDRY 172
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++E QLPRI D + RY GL +GQVVK+ + E + + ++R V
Sbjct: 173 RLKESQLPRIQVSDPVARYLGLRRGQVVKIIRKSETAGRYASYRWV 218
[140][TOP]
>UniRef100_B8M3B9 RNA polymerase subunit n=1 Tax=Talaromyces stipitatus ATCC 10500
RepID=B8M3B9_TALSN
Length = 236
Score = 78.2 bits (191), Expect = 3e-13
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = -1
Query: 355 EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEK 176
E FQ +DLLVNIT H L P+H +L+ E+ LL+++ ++E QLPRI D + RY GL +
Sbjct: 154 EHFQESDLLVNITHHELVPKHVLLSAEEKARLLERYRLKESQLPRIQVSDPVARYLGLRR 213
Query: 175 GQVVKVNYRGELSESHVAFRCV 110
GQVVK+ + E + + ++R V
Sbjct: 214 GQVVKIIRKSETAGRYASYRWV 235
[141][TOP]
>UniRef100_B6QBA8 RNA polymerase subunit n=1 Tax=Penicillium marneffei ATCC 18224
RepID=B6QBA8_PENMQ
Length = 172
Score = 78.2 bits (191), Expect = 3e-13
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = -1
Query: 355 EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEK 176
E FQ +DLLVNIT H L P+H +L+ E+ LL+++ ++E QLPRI D + RY GL +
Sbjct: 90 EHFQESDLLVNITHHELVPKHVLLSAEEKARLLERYRLKESQLPRIQVSDPVARYLGLRR 149
Query: 175 GQVVKVNYRGELSESHVAFRCV 110
GQVVK+ + E + + ++R V
Sbjct: 150 GQVVKIIRKSETAGRYASYRWV 171
[142][TOP]
>UniRef100_B6QBA7 RNA polymerase subunit n=1 Tax=Penicillium marneffei ATCC 18224
RepID=B6QBA7_PENMQ
Length = 236
Score = 78.2 bits (191), Expect = 3e-13
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = -1
Query: 355 EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEK 176
E FQ +DLLVNIT H L P+H +L+ E+ LL+++ ++E QLPRI D + RY GL +
Sbjct: 154 EHFQESDLLVNITHHELVPKHVLLSAEEKARLLERYRLKESQLPRIQVSDPVARYLGLRR 213
Query: 175 GQVVKVNYRGELSESHVAFRCV 110
GQVVK+ + E + + ++R V
Sbjct: 214 GQVVKIIRKSETAGRYASYRWV 235
[143][TOP]
>UniRef100_P20434 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=5
Tax=Saccharomyces cerevisiae RepID=RPAB1_YEAST
Length = 215
Score = 78.2 bits (191), Expect = 3e-13
Identities = 39/104 (37%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAI-ELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
I V QN++T A+K + + +E F L+VNIT H L P+H L+ ++ LLK++
Sbjct: 109 IFVYQNNITPSAMKLVPSIPPATIETFNEAALVVNITHHELVPKHIRLSSDEKRELLKRY 168
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
++E QLPRI + D + Y GL++G+VVK+ + E S + ++R
Sbjct: 169 RLKESQLPRIQRADPVALYLGLKRGEVVKIIRKSETSGRYASYR 212
[144][TOP]
>UniRef100_UPI0000D56A05 PREDICTED: similar to AGAP010064-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D56A05
Length = 210
Score = 77.8 bits (190), Expect = 3e-13
Identities = 41/116 (35%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ E I I+V+Q +T A +++ + K +E F ++LL+NITEH L P+H V+
Sbjct: 94 MQDENIHRAIIVVQQGMTPSAKQSLVDMAPKYILEQFLESELLINITEHELVPEHVVMTP 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ ++E L RI D + RY+GL++GQVVK+ E + ++++R V
Sbjct: 154 EEKQELLTRYKLKENMLMRIQAGDPVARYFGLKRGQVVKIIRPSETAGRYISYRLV 209
[145][TOP]
>UniRef100_C8VQY1 RNA polymerase subunit (AFU_orthologue; AFUA_1G14110) n=2
Tax=Emericella nidulans RepID=C8VQY1_EMENI
Length = 235
Score = 77.8 bits (190), Expect = 3e-13
Identities = 37/82 (45%), Positives = 54/82 (65%)
Frame = -1
Query: 355 EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEK 176
E FQ DLLVNIT H L P+H +L+ E+ LL+++ ++E QLPRI D + RY GL +
Sbjct: 153 EHFQEQDLLVNITRHELVPKHVLLSPEEKSKLLQRYRLKESQLPRIQVSDPVARYLGLRR 212
Query: 175 GQVVKVNYRGELSESHVAFRCV 110
GQVVK+ + E + + ++R V
Sbjct: 213 GQVVKIIRKSETAGRYASYRWV 234
[146][TOP]
>UniRef100_C4VBP1 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01
RepID=C4VBP1_NOSCE
Length = 204
Score = 77.8 bits (190), Expect = 3e-13
Identities = 34/106 (32%), Positives = 65/106 (61%)
Frame = -1
Query: 427 LILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
LILV+ +++ + + + K+EIF+ +L+ NIT+H P+H++LND + ++L+K
Sbjct: 91 LILVINQKMSSASQNIVNVSDLKIEIFKDEELMFNITKHVSVPRHRILNDTEKNSILEKL 150
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
I Q+P+I K+D + R+ G E GQVV++ + + + ++ V
Sbjct: 151 KITVDQMPKILKRDPVCRFLGAESGQVVEITRKSRTAGESIFYKVV 196
[147][TOP]
>UniRef100_B0X7A5 DNA-directed RNA polymerase II 23 kDa polypeptide n=3 Tax=Culicidae
RepID=B0X7A5_CULQU
Length = 210
Score = 77.4 bits (189), Expect = 4e-13
Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I I+V+Q +T A +++ + K +E F ++LL+NITEH L P+H V+
Sbjct: 94 MQEENIHRAIVVVQAGMTPSAKQSLVDMAPKYILEQFLESELLINITEHELVPEHVVMTP 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ ++E L RI D + RY+GL++GQVVK+ E + ++++R V
Sbjct: 154 EEKQELLARYKLKENMLMRIQAGDPVARYFGLKRGQVVKIIRPSETAGRYISYRLV 209
[148][TOP]
>UniRef100_A2DEU9 RNA polymerase Rpb5, C-terminal domain containing protein n=1
Tax=Trichomonas vaginalis G3 RepID=A2DEU9_TRIVA
Length = 217
Score = 77.4 bits (189), Expect = 4e-13
Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 4/117 (3%)
Frame = -1
Query: 448 SQETISGLILVLQN----HVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQVLN 281
+ + I+ LILV Q H+ ++ K + L K+E F + +L NIT H P+H+VL+
Sbjct: 100 ADKPITHLILVHQEGSLAHIFDRIKKQLRLIGKKLETFTLQELQYNITMHFFVPKHKVLS 159
Query: 280 DEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
+E+ L ++ I+E +LP+I D +VRYYG + G ++++ R E V +R V
Sbjct: 160 NEEKNELFNRYKIDETKLPQILSTDPVVRYYGADPGAIIEITRRSETCGRVVTYRLV 216
[149][TOP]
>UniRef100_C0NL28 RNA polymerase subunit n=2 Tax=Ajellomyces capsulatus
RepID=C0NL28_AJECG
Length = 236
Score = 77.4 bits (189), Expect = 4e-13
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
I V Q ++ A++ + + E FQ +LLVNIT H L P+H +L+ E+ LL+++
Sbjct: 130 IFVSQTPISPSAMRVLNSIPGRFCEHFQEQELLVNITHHELVPKHVLLSAEEKKRLLQRY 189
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++E QLPRI D + +Y GL +GQVVK+ R E + + ++R V
Sbjct: 190 RLKESQLPRIQSGDPVAKYLGLRRGQVVKIIRRSETAGRYASYRWV 235
[150][TOP]
>UniRef100_B2VUN9 DNA-directed RNA polymerases I n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2VUN9_PYRTR
Length = 235
Score = 77.4 bits (189), Expect = 4e-13
Identities = 35/83 (42%), Positives = 56/83 (67%)
Frame = -1
Query: 358 VEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLE 179
VE+F DLLVNIT+H L P+H +L+DE+ LL+++ +++ QLPRI D + +Y GL
Sbjct: 152 VEVFIEQDLLVNITKHELVPKHVLLSDEEKQQLLQRYRLKQTQLPRIQSTDPVAKYLGLR 211
Query: 178 KGQVVKVNYRGELSESHVAFRCV 110
+G VVK+ + E + + ++R V
Sbjct: 212 RGSVVKIIRKSETAGRYASYRWV 234
[151][TOP]
>UniRef100_A7ECH0 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum
1980 UF-70 RepID=A7ECH0_SCLS1
Length = 242
Score = 77.4 bits (189), Expect = 4e-13
Identities = 43/117 (36%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Frame = -1
Query: 460 ADILSQETISGLILVLQNHVTNQALKAIELFSF--KVEIFQITDLLVNITEHSLKPQHQV 287
A LSQ S IL+ + A K I + ++E F DLLVNIT H L P+H +
Sbjct: 122 AQHLSQHNFSAGILIAPVPPSGPAQKIIPAVASDTRIETFVEQDLLVNITHHELVPKHVL 181
Query: 286 LNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
L+ E+ LL ++ +++ QLPRI D + +Y GL +GQVVK+ + E + + ++R
Sbjct: 182 LSKEERAKLLSRYRLKDTQLPRIQAADPVAKYLGLRRGQVVKIIRKSETAGRYASYR 238
[152][TOP]
>UniRef100_A6R8U3 DNA-directed RNA polymerases II 24 kDa polypeptide n=1
Tax=Ajellomyces capsulatus NAm1 RepID=A6R8U3_AJECN
Length = 236
Score = 77.4 bits (189), Expect = 4e-13
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
I V Q ++ A++ + + E FQ +LLVNIT H L P+H +L+ E+ LL+++
Sbjct: 130 IFVSQTPISPSAMRVLNSIPGRFCEHFQEQELLVNITHHELVPKHVLLSAEEKKRLLQRY 189
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++E QLPRI D + +Y GL +GQVVK+ R E + + ++R V
Sbjct: 190 RLKESQLPRIQSGDPVAKYLGLRRGQVVKIIRRSETAGRYASYRWV 235
[153][TOP]
>UniRef100_A2DNL3 RNA polymerase Rpb5, N-terminal domain containing protein n=1
Tax=Trichomonas vaginalis G3 RepID=A2DNL3_TRIVA
Length = 202
Score = 77.0 bits (188), Expect = 6e-13
Identities = 30/84 (35%), Positives = 57/84 (67%)
Frame = -1
Query: 358 VEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLE 179
+E F ++++NITEH L P+H+VL +++ +LK++++ E QLPRI + D + RY G++
Sbjct: 119 IEFFSFDEVIINITEHELVPKHEVLTEDEKQEVLKRYNVTETQLPRILRTDPVSRYLGVK 178
Query: 178 KGQVVKVNYRGELSESHVAFRCVW 107
GQ++K+ + + +V +R V+
Sbjct: 179 PGQLLKITRNSDTAGHYVTYRLVY 202
[154][TOP]
>UniRef100_A6SPK6 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
B05.10 RepID=A6SPK6_BOTFB
Length = 242
Score = 77.0 bits (188), Expect = 6e-13
Identities = 43/117 (36%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Frame = -1
Query: 460 ADILSQETISGLILVLQNHVTNQALKAIELFSF--KVEIFQITDLLVNITEHSLKPQHQV 287
A LSQ S IL+ + A K I + ++E F DLLVNIT H L P+H +
Sbjct: 122 AQHLSQHNFSAGILIAPVAPSGPAQKIIPAVASETRIETFVEQDLLVNITHHELVPKHVL 181
Query: 286 LNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
L+ E+ LL ++ +++ QLPRI D + +Y GL +GQVVK+ + E + + ++R
Sbjct: 182 LSREERAKLLSRYRLKDTQLPRIQAADPVAKYLGLRRGQVVKIIRKSETAGRYASYR 238
[155][TOP]
>UniRef100_Q98RN7 RNA polymerase I, II and III 24.3 kDa subunit n=1 Tax=Guillardia
theta RepID=Q98RN7_GUITH
Length = 214
Score = 76.6 bits (187), Expect = 8e-13
Identities = 36/115 (31%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVT---NQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQVLN 281
+ E S ++++L +T QA+ +I + +E F +L+VNIT H L P+H++L+
Sbjct: 97 IKNEGFSRVLMILNGKLTPHAKQAVSSINSNNDLIEYFSENELIVNITHHMLVPKHEILS 156
Query: 280 DEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
++ +LL+++SI+ LP+I K D + +Y GL++ ++VK+ E S + +R
Sbjct: 157 KNESKSLLERYSIKFDHLPKILKNDPVAKYLGLQRSEIVKITRVSETSGKFITYR 211
[156][TOP]
>UniRef100_Q7RKX0 RNA polymerase Rpb5, C-terminal domain, putative n=1 Tax=Plasmodium
yoelii yoelii RepID=Q7RKX0_PLAYO
Length = 112
Score = 76.6 bits (187), Expect = 8e-13
Identities = 43/101 (42%), Positives = 64/101 (63%), Gaps = 2/101 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +++I ILV QN +T A AI+ + + +E F T+LLVNIT+H L P+H L
Sbjct: 10 MDEKSIQRAILVTQNTLTPFAKDAIKEAAPRHIIENFLDTELLVNITKHELVPKHIPLTS 69
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVN 155
++ LL+++ I+E +LPRI D + RY+GL KGQV K N
Sbjct: 70 DEKRNLLQRYKIKENKLPRIQDVDPVCRYFGLSKGQVQKNN 110
[157][TOP]
>UniRef100_A0BLZ0 Chromosome undetermined scaffold_115, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0BLZ0_PARTE
Length = 223
Score = 76.3 bits (186), Expect = 1e-12
Identities = 37/91 (40%), Positives = 58/91 (63%)
Frame = -1
Query: 388 LKAIELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKK 209
+ +I+ +SF E+F DL+ ++T+H L PQH +LND + LLKK+ + + QLPRI +
Sbjct: 132 VNSIQTYSF--ELFGEDDLVYDVTKHELVPQHIILNDREKELLLKKYGLVDNQLPRILQS 189
Query: 208 DAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
D I R+ GL G VVK+ + E + +V +R
Sbjct: 190 DPIARFLGLHHGDVVKIIRKSETAGLYVTYR 220
[158][TOP]
>UniRef100_A0BL34 Chromosome undetermined scaffold_113, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0BL34_PARTE
Length = 224
Score = 76.3 bits (186), Expect = 1e-12
Identities = 37/91 (40%), Positives = 59/91 (64%)
Frame = -1
Query: 388 LKAIELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKK 209
+ +I+ +SF E+F DL+ ++T+H L PQH +LND++ LLKK+ + + QLPRI +
Sbjct: 133 VNSIQTYSF--ELFGEDDLVYDVTKHELVPQHIILNDKEKELLLKKYGMVDNQLPRILQS 190
Query: 208 DAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
D I R+ GL G VVK+ + E + +V +R
Sbjct: 191 DPIARFLGLHHGDVVKIIRKSETAGLYVTYR 221
[159][TOP]
>UniRef100_C4LW54 RNA polymerase subunit Rpb5, putative n=1 Tax=Entamoeba histolytica
HM-1:IMSS RepID=C4LW54_ENTHI
Length = 204
Score = 75.9 bits (185), Expect = 1e-12
Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIEL-FSFKVEIFQITDLLVNITEHSLKPQHQVLNDE 275
+ E + I+V + +++ + +E K E +L+VN+T H L PQH +L+ E
Sbjct: 89 VESEHVKRAIIVYRGKLSSPVKQMMEQPREVKWEALLEDELIVNVTHHILVPQHILLSPE 148
Query: 274 DNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCVW 107
+ LLKK+ ++E QLPR+ D I +YYG ++G VVK+ + E + +V +R V+
Sbjct: 149 EKQELLKKYQVKESQLPRLLTSDPISKYYGFQRGDVVKIIRKSETAGRYVTYRAVF 204
[160][TOP]
>UniRef100_B0EA74 DNA-directed RNA polymerases I, II, and III subunit RPABC1,
putative n=1 Tax=Entamoeba dispar SAW760
RepID=B0EA74_ENTDI
Length = 204
Score = 75.9 bits (185), Expect = 1e-12
Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIEL-FSFKVEIFQITDLLVNITEHSLKPQHQVLNDE 275
+ E + I+V + +++ + +E K E +L+VN+T H L PQH +L+ E
Sbjct: 89 VESEHVKRAIIVYRGKLSSPVKQMMEQPREVKWEALLEDELIVNVTHHVLVPQHILLSPE 148
Query: 274 DNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCVW 107
+ LLKK+ ++E QLPR+ D I +YYG ++G VVK+ + E + +V +R V+
Sbjct: 149 EKQELLKKYQVKESQLPRLLTSDPISKYYGFQRGDVVKIIRKSETAGRYVTYRAVF 204
[161][TOP]
>UniRef100_C5G7M7 DNA-directed RNA polymerase II polypeptide n=2 Tax=Ajellomyces
dermatitidis RepID=C5G7M7_AJEDR
Length = 236
Score = 75.9 bits (185), Expect = 1e-12
Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
I + Q ++ A++ + + E FQ +LLVNIT H L P+H +L+ E+ LL+++
Sbjct: 130 IFISQTPISPSAIRVLNSIPGRFCEHFQEQELLVNITHHELVPKHVLLSAEEKKRLLQRY 189
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++E QLPRI D + +Y GL +GQVVK+ + E + + ++R V
Sbjct: 190 RLKESQLPRIQSGDPVAKYLGLRRGQVVKIIRKSETAGRYASYRWV 235
[162][TOP]
>UniRef100_C1GUJ0 DNA-directed RNA polymerases I n=1 Tax=Paracoccidioides
brasiliensis Pb01 RepID=C1GUJ0_PARBA
Length = 236
Score = 75.5 bits (184), Expect = 2e-12
Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
I + Q ++ A++ + + E FQ +LLVNIT H L P+H +L+ E+ LL+++
Sbjct: 130 IFISQTPISPSAMRVLNSIPGRFCEHFQEQELLVNITHHELVPKHILLSAEEKKRLLQRY 189
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++E QLPRI D + +Y GL +GQVVK+ + E + + ++R V
Sbjct: 190 RLKESQLPRIQSGDPVAKYLGLRRGQVVKIIRKSETAGRYASYRWV 235
[163][TOP]
>UniRef100_C1FYH2 DNA-directed RNA polymerases I n=1 Tax=Paracoccidioides
brasiliensis Pb18 RepID=C1FYH2_PARBD
Length = 236
Score = 75.5 bits (184), Expect = 2e-12
Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
I + Q ++ A++ + + E FQ +LLVNIT H L P+H +L+ E+ LL+++
Sbjct: 130 IFISQTPISPSAMRVLNSIPGRFCEHFQEQELLVNITHHELVPKHILLSAEEKKRLLQRY 189
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++E QLPRI D + +Y GL +GQVVK+ + E + + ++R V
Sbjct: 190 RLKESQLPRIQSGDPVAKYLGLRRGQVVKIIRKSETAGRYASYRWV 235
[164][TOP]
>UniRef100_C0S407 DNA-directed RNA polymerases I n=1 Tax=Paracoccidioides
brasiliensis Pb03 RepID=C0S407_PARBP
Length = 171
Score = 75.5 bits (184), Expect = 2e-12
Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
I + Q ++ A++ + + E FQ +LLVNIT H L P+H +L+ E+ LL+++
Sbjct: 65 IFISQTPISPSAMRVLNSIPGRFCEHFQEQELLVNITHHELVPKHILLSAEEKKRLLQRY 124
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++E QLPRI D + +Y GL +GQVVK+ + E + + ++R V
Sbjct: 125 RLKESQLPRIQSGDPVAKYLGLRRGQVVKIIRKSETAGRYASYRWV 170
[165][TOP]
>UniRef100_C5FC74 DNA-directed RNA polymerase II polypeptide n=1 Tax=Microsporum
canis CBS 113480 RepID=C5FC74_NANOT
Length = 236
Score = 74.3 bits (181), Expect = 4e-12
Identities = 38/115 (33%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDE 275
+ Q+ I + Q+ ++ A++ + + E F +LLVNIT H L P+H +L+ E
Sbjct: 121 IDQQNYHAGIFITQSPISPSAIRLLTAIPGRFCEHFLEQELLVNITHHELVPKHILLSAE 180
Query: 274 DNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
+ LL+++ ++E QLPRI D + +Y GL +GQVVK+ + E + + ++R V
Sbjct: 181 EKKKLLQRYRLKESQLPRIQSGDPVAKYLGLRRGQVVKIIRKSETAGRYASYRWV 235
[166][TOP]
>UniRef100_Q9P4B9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Kluyveromyces marxianus RepID=RPAB1_KLUMA
Length = 215
Score = 73.6 bits (179), Expect = 6e-12
Identities = 38/104 (36%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
I + Q+ +T A K + + V E F L+VNIT H L P+H L+D + LLK++
Sbjct: 109 IFIYQSGITPSANKILPTAAPAVIETFPEASLVVNITHHELVPKHIRLSDAEKKELLKRY 168
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
++E QLPRI + D + Y GL++G+V+K+ + E S + ++R
Sbjct: 169 RLKESQLPRIQRMDPVALYLGLKRGEVIKIIRKSETSGRYASYR 212
[167][TOP]
>UniRef100_Q0UZB4 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0UZB4_PHANO
Length = 277
Score = 73.2 bits (178), Expect = 8e-12
Identities = 33/83 (39%), Positives = 54/83 (65%)
Frame = -1
Query: 358 VEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLE 179
+E+F DLLVNIT+H L P+H +L+ E+ LL ++ ++E QLPRI D + ++ GL
Sbjct: 194 IEVFVEQDLLVNITKHELVPKHVLLSAEEKAQLLTRYRLKETQLPRIQSTDPVAKFLGLR 253
Query: 178 KGQVVKVNYRGELSESHVAFRCV 110
+G VVK+ + E + + ++R V
Sbjct: 254 RGSVVKIIRKSETAGRYASYRWV 276
[168][TOP]
>UniRef100_A9UR01 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UR01_MONBE
Length = 210
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Frame = -1
Query: 457 DILSQETISGLILVLQNHVTNQALKAIELF-----SFKVEIFQITDLLVNITEHSLKPQH 293
D L + + I+V Q V A I++ + VE F +L+ N+T H L P H
Sbjct: 86 DRLKSDNLRRAIIVYQRKVAPVAKSHIDILLKEDPPYIVETFAEAELVYNVTRHHLVPHH 145
Query: 292 QVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRC 113
++L + + LL+++ + E +LP+I D + RY+G +KGQV+++ + + +V +R
Sbjct: 146 EILKESEKQQLLERYCVSEDRLPQIQPNDPVCRYFGAQKGQVLRIVRSSQTAGRYVTYRI 205
Query: 112 V 110
V
Sbjct: 206 V 206
[169][TOP]
>UniRef100_A9CSN6 DNA-directed RNA polymerase, subunit H, RpoH-RPB5 n=1
Tax=Enterocytozoon bieneusi H348 RepID=A9CSN6_ENTBH
Length = 202
Score = 72.4 bits (176), Expect = 1e-11
Identities = 37/113 (32%), Positives = 62/113 (54%)
Frame = -1
Query: 448 SQETISGLILVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDEDN 269
S ++IS LIL+ N + + AL ++ +F +E+F D+L N T+H L P H++++ E+
Sbjct: 88 SNQSISKLILISCNKLNHAALAYLDKSNFSIELFLYKDILFNPTKHILVPHHKIMSIEEK 147
Query: 268 PTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
TLL LP I KKD I +Y G E V+++ + + + +R V
Sbjct: 148 TTLLNNLKCSLDDLPIILKKDVIAKYLGAELNDVIEITRKSKTTGESKYYRVV 200
[170][TOP]
>UniRef100_Q9FJL8 RNA polymerase I, II and III 24.3 kDa subunit-like protein n=1
Tax=Arabidopsis thaliana RepID=Q9FJL8_ARATH
Length = 210
Score = 72.0 bits (175), Expect = 2e-11
Identities = 37/105 (35%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKK 251
I+V+ +T A A+ + +E+F+ +L+ NITEH L ++ VL+D+ LL
Sbjct: 103 IVVVPMAITAPARMAVSELNKMLTIEVFEEAELVTNITEHKLVNKYYVLDDQAKKKLLNT 162
Query: 250 FSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
+++++ QLPRI D + RYYGL++GQVVK+ S + +R
Sbjct: 163 YTVQDTQLPRILVTDPLARYYGLKRGQVVKIRRSDATSLDYYTYR 207
[171][TOP]
>UniRef100_Q6CJ62 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Kluyveromyces lactis RepID=RPAB1_KLULA
Length = 215
Score = 72.0 bits (175), Expect = 2e-11
Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
I + Q+ +T A K + + V E F L+VNIT H L P+H L++ + LLK++
Sbjct: 109 IFIYQSGITPSANKILPTAAPAVIETFPEASLVVNITHHELVPKHIRLSEAEKKELLKRY 168
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
++E QLPRI + D + Y GL++G+V+K+ + E S + ++R
Sbjct: 169 RLKESQLPRIQRMDPVALYLGLKRGEVIKIIRKSETSGRYASYR 212
[172][TOP]
>UniRef100_B5E0K0 GA24393 n=1 Tax=Drosophila pseudoobscura pseudoobscura
RepID=B5E0K0_DROPS
Length = 210
Score = 71.6 bits (174), Expect = 2e-11
Identities = 38/116 (32%), Positives = 69/116 (59%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E+I I+V+QN +T A +A+ + K +E F +L+ NITE+ P+H V+
Sbjct: 94 MQEESIYRAIIVVQNSITPSARQALVEMAPKYVLEQFLEAELMFNITENENVPEHVVMTP 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++ LL ++ ++E L RI D + RY+GL+ GQVVK+ + + ++++R V
Sbjct: 154 DEKQELLSRYKLKESMLMRIQVNDPVSRYFGLKPGQVVKIIRSSKSAGRYISYRIV 209
[173][TOP]
>UniRef100_B4GBQ3 GL10501 n=1 Tax=Drosophila persimilis RepID=B4GBQ3_DROPE
Length = 210
Score = 71.6 bits (174), Expect = 2e-11
Identities = 38/116 (32%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E+I I+V+QN +T A +A+ + K +E F +L+ NITE+ P+H V+
Sbjct: 94 MQEESIYRAIIVVQNSITPSARQALVEMAPKYVLEQFLEAELMFNITENENVPEHVVMTP 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++ LL ++ + E L RI D + RY+GL+ GQVVK+ + + ++++R V
Sbjct: 154 DEKQELLSRYKLRESMLMRIQVNDPVSRYFGLKPGQVVKIIRSSKTAGRYISYRIV 209
[174][TOP]
>UniRef100_Q24FV0 RNA polymerase Rpb5, C-terminal domain containing protein n=1
Tax=Tetrahymena thermophila SB210 RepID=Q24FV0_TETTH
Length = 275
Score = 71.2 bits (173), Expect = 3e-11
Identities = 35/90 (38%), Positives = 54/90 (60%)
Frame = -1
Query: 379 IELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAI 200
I++F +K EIF DL++NIT+H L P+H LN + L+ K+ I + QLP+I D I
Sbjct: 186 IQIF-YKYEIFFFDDLVINITKHQLVPKHVPLNAIEKKKLMDKYKINDAQLPKILSTDPI 244
Query: 199 VRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
+Y+GL QV K+ E + ++ +R V
Sbjct: 245 TKYFGLRTKQVFKIERDSETAGKYITYRIV 274
[175][TOP]
>UniRef100_C5PAC2 DNA-directed RNA polymerase subunit, putative n=2 Tax=Coccidioides
RepID=C5PAC2_COCP7
Length = 236
Score = 71.2 bits (173), Expect = 3e-11
Identities = 37/106 (34%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = -1
Query: 424 ILVLQNHVTNQALKAIELFSFKV-EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKF 248
I + Q+ ++ A++ + + E F +LLVNIT H L P+H +L+ E+ LL+++
Sbjct: 130 IFITQSPISPSAIRLLTGIPGRFCEHFLEQELLVNITHHELVPKHVLLSAEEKKRLLQRY 189
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
++E QLPRI D + +Y GL +GQVVK+ + E + + ++R V
Sbjct: 190 RLKESQLPRIQIGDPVAKYLGLRRGQVVKIIRKSETAGRYASYRWV 235
[176][TOP]
>UniRef100_B5DLP1 GA22581 n=1 Tax=Drosophila pseudoobscura pseudoobscura
RepID=B5DLP1_DROPS
Length = 320
Score = 70.9 bits (172), Expect = 4e-11
Identities = 37/111 (33%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Frame = -1
Query: 442 ETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLNDEDN 269
E I ILV+++ +T A ++I + + +E F ++L +N+T+H L PQH VL++ +
Sbjct: 97 EGIHRAILVVRDCLTPPAKQSIMAMAPLYIMEQFLESELTINVTKHELVPQHVVLSEVEK 156
Query: 268 PTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
L + + ++E Q+ R+ D + RYYGL+ GQVVK+ E + ++++R
Sbjct: 157 KQLFRCYRLKESQMMRMLSSDPVARYYGLKPGQVVKIVRASESAGKYISYR 207
[177][TOP]
>UniRef100_Q9LUR5 RNA polymerase-like protein n=1 Tax=Arabidopsis thaliana
RepID=Q9LUR5_ARATH
Length = 178
Score = 70.5 bits (171), Expect = 6e-11
Identities = 33/85 (38%), Positives = 51/85 (60%)
Frame = -1
Query: 364 FKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYG 185
F +E+FQ +L+VN+ EH P+HQ L E+ L++ LPRI D I RY+G
Sbjct: 93 FHIEVFQEKELIVNVKEHVFVPEHQALTTEEKQKFLERKRTRFVVLPRIHVTDPIARYFG 152
Query: 184 LEKGQVVKVNYRGELSESHVAFRCV 110
L++G+VVK++ E S ++ +R V
Sbjct: 153 LKRGEVVKISRLSETSGRYITYRYV 177
[178][TOP]
>UniRef100_A4HXV2 DNA-directed RNA polymerases II, putative n=1 Tax=Leishmania
infantum RepID=A4HXV2_LEIIN
Length = 239
Score = 70.5 bits (171), Expect = 6e-11
Identities = 33/84 (39%), Positives = 54/84 (64%)
Frame = -1
Query: 361 KVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGL 182
+ E+F+ +L VNIT H L P+H L++E+ +L+ ++E QLPRI D + RYYGL
Sbjct: 155 RFELFEEDELSVNITHHELVPKHSPLSEEELTDVLQAHALELNQLPRILSTDPVARYYGL 214
Query: 181 EKGQVVKVNYRGELSESHVAFRCV 110
++GQVV++ + + +V +R V
Sbjct: 215 KRGQVVRIERKSMSAGLYVTYRQV 238
[179][TOP]
>UniRef100_UPI0000D9E960 PREDICTED: similar to DNA directed RNA polymerase II polypeptide E
n=1 Tax=Macaca mulatta RepID=UPI0000D9E960
Length = 278
Score = 70.1 bits (170), Expect = 7e-11
Identities = 35/96 (36%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ ++V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 94 MQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTK 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQ 170
E+ LL ++ + E QLPRI D + RY+G+++GQ
Sbjct: 154 EEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQ 189
[180][TOP]
>UniRef100_Q8SRJ3 DNA-DIRECTED RNA POLYMERASE I n=1 Tax=Encephalitozoon cuniculi
RepID=Q8SRJ3_ENCCU
Length = 212
Score = 70.1 bits (170), Expect = 7e-11
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = -1
Query: 427 LILVLQNHVTNQALKAIELFS-FKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKK 251
LIL+L + + I L F +EIF + +L+ N T+HS P H+VL+ E+ ++ +
Sbjct: 101 LILILPQLPSPTVMSMIPLTPRFSIEIFLVEELIFNKTKHSWVPPHRVLSREERESVFRT 160
Query: 250 FSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
+ LPRI K D I RYYG ++G VV++ R + + + +R V
Sbjct: 161 LKLGPGDLPRILKSDVIARYYGAKQGDVVEITRRSKTAGESIYYRVV 207
[181][TOP]
>UniRef100_C4JYC4 DNA-directed RNA polymerases II 24 kDa polypeptide n=1
Tax=Uncinocarpus reesii 1704 RepID=C4JYC4_UNCRE
Length = 239
Score = 70.1 bits (170), Expect = 7e-11
Identities = 34/82 (41%), Positives = 52/82 (63%)
Frame = -1
Query: 355 EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEK 176
E F +LLVNIT H L P+H +L+ E+ LL ++ ++E QLPRI D + +Y GL +
Sbjct: 157 EHFLEQELLVNITHHELVPKHLLLSAEEKKRLLHRYRLKESQLPRIQIGDPVAKYLGLRR 216
Query: 175 GQVVKVNYRGELSESHVAFRCV 110
GQVVK+ + E + + ++R V
Sbjct: 217 GQVVKIIRKSETAGRYASYRWV 238
[182][TOP]
>UniRef100_UPI00005A3E0E PREDICTED: similar to DNA directed RNA polymerase II polypeptide E
isoform 1 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A3E0E
Length = 208
Score = 69.7 bits (169), Expect = 9e-11
Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ ++V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 94 MQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTK 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
E+ LL ++ + E QLPRI D RY+G K +VVK+ E + ++ +R V
Sbjct: 154 EEVTELLARYKLRENQLPRIQAGDQKARYFG--KSEVVKIIRPSETAGRYITYRLV 207
[183][TOP]
>UniRef100_Q8T1Q5 DNA-directed RNA polymerases II, putative n=1 Tax=Trypanosoma cruzi
RepID=Q8T1Q5_TRYCR
Length = 219
Score = 69.3 bits (168), Expect = 1e-10
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Frame = -1
Query: 448 SQETISGLILVLQNHVTNQALKAIE-----LFSFKVEIFQITDLLVNITEHSLKPQHQVL 284
S+ +I+V+Q + + +E K+++F DL+VNIT H L P+H L
Sbjct: 101 SEANCDRVIIVVQGRINAIVKRHVEDINRSSLGLKIQLFDEDDLVVNITHHELVPKHTQL 160
Query: 283 NDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
DE+ +L+ ++E LPRI D + Y GLE+G+VV++ + + +V +R V
Sbjct: 161 EDEEVKEMLQAHALELSALPRILSTDPVAAYLGLERGRVVRIERKSMSAGFYVTYRQV 218
[184][TOP]
>UniRef100_Q388R5 DNA-directed RNA polymerases II subunit, putative n=1
Tax=Trypanosoma brucei RepID=Q388R5_9TRYP
Length = 219
Score = 69.3 bits (168), Expect = 1e-10
Identities = 34/84 (40%), Positives = 51/84 (60%)
Frame = -1
Query: 361 KVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGL 182
KV++F DL+VNIT H L P+H L DE+ +L+ S+E LPRI D + Y GL
Sbjct: 135 KVQLFDEDDLVVNITHHELVPKHTQLEDEEVKEMLEAHSLELNMLPRILSTDPVAAYLGL 194
Query: 181 EKGQVVKVNYRGELSESHVAFRCV 110
E+G+VV++ + + +V +R V
Sbjct: 195 ERGRVVRIERKSVSAGFYVTYRQV 218
[185][TOP]
>UniRef100_C9ZZV1 DNA-directed RNA polymerases II subunit, putative n=2
Tax=Trypanosoma brucei RepID=C9ZZV1_TRYBG
Length = 219
Score = 69.3 bits (168), Expect = 1e-10
Identities = 34/84 (40%), Positives = 51/84 (60%)
Frame = -1
Query: 361 KVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGL 182
KV++F DL+VNIT H L P+H L DE+ +L+ S+E LPRI D + Y GL
Sbjct: 135 KVQLFDEDDLVVNITHHELVPKHTQLEDEEVKEMLEAHSLELNMLPRILSTDPVAAYLGL 194
Query: 181 EKGQVVKVNYRGELSESHVAFRCV 110
E+G+VV++ + + +V +R V
Sbjct: 195 ERGRVVRIERKSVSAGFYVTYRQV 218
[186][TOP]
>UniRef100_A4H9I9 DNA-directed RNA polymerases II, putative n=1 Tax=Leishmania
braziliensis RepID=A4H9I9_LEIBR
Length = 239
Score = 68.9 bits (167), Expect = 2e-10
Identities = 33/84 (39%), Positives = 53/84 (63%)
Frame = -1
Query: 361 KVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGL 182
+ E+F+ +L VNIT H L P+H L++E+ +L ++E QLPRI D + RYYGL
Sbjct: 155 RFELFEEDELSVNITHHELVPKHTPLSEEELKDVLHAHALELHQLPRILSTDPVARYYGL 214
Query: 181 EKGQVVKVNYRGELSESHVAFRCV 110
++GQVV++ + + +V +R V
Sbjct: 215 KRGQVVRIERKSMSAGLYVTYRQV 238
[187][TOP]
>UniRef100_UPI0000EB19D6 DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RNA
polymerases I, II, and III subunit ABC1) (DNA-directed
RNA polymerase II subunit E) (RPB5) (DNA-directed RNA
polymerase II 23 kDa polypeptide) (XAP4). n=1 Tax=Canis
lupus familiaris RepID=UPI0000EB19D6
Length = 212
Score = 68.6 bits (166), Expect = 2e-10
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 4/118 (3%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I+ ++V+Q +T A +++ + K +E F +LL+NITEH L P+H V+
Sbjct: 94 MQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTK 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKG--QVVKVNYRGELSESHVAFRCV 110
E+ LL ++ + E QLPRI D RY+G + QVVK+ E + ++ +R V
Sbjct: 154 EEVTELLARYKLRENQLPRIQAGDQKARYFGKSEADPQVVKIIRPSETAGRYITYRLV 211
[188][TOP]
>UniRef100_Q4YN14 Putative uncharacterized protein n=1 Tax=Plasmodium berghei
RepID=Q4YN14_PLABE
Length = 117
Score = 68.6 bits (166), Expect = 2e-10
Identities = 32/74 (43%), Positives = 48/74 (64%)
Frame = -1
Query: 331 LVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNY 152
+VNIT+H L P+H L ++ LL+++ I+E +LPRI D + RY+GL KGQVVK+
Sbjct: 16 VVNITKHELVPRHIPLTSDEKRNLLQRYKIKENKLPRIQDVDPVCRYFGLSKGQVVKIIR 75
Query: 151 RGELSESHVAFRCV 110
E + +V +R V
Sbjct: 76 PSETAGRYVTYRLV 89
[189][TOP]
>UniRef100_Q4QDW4 DNA-directed RNA polymerases II, putative n=1 Tax=Leishmania major
RepID=Q4QDW4_LEIMA
Length = 239
Score = 68.6 bits (166), Expect = 2e-10
Identities = 33/84 (39%), Positives = 52/84 (61%)
Frame = -1
Query: 361 KVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGL 182
+ E+F+ +L VNIT H L P+H L++E+ +L ++E QLPRI D + RYYGL
Sbjct: 155 RFELFEEDELSVNITHHELVPKHTPLSEEELRDVLHAHALELNQLPRILSTDPVARYYGL 214
Query: 181 EKGQVVKVNYRGELSESHVAFRCV 110
+GQVV++ + + +V +R V
Sbjct: 215 RRGQVVRIERKSMSAGLYVTYRQV 238
[190][TOP]
>UniRef100_A9USL7 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9USL7_MONBE
Length = 176
Score = 68.2 bits (165), Expect = 3e-10
Identities = 32/84 (38%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = -1
Query: 355 EIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEK 176
+ F+ +L+VN+T+H L P+H + E+ LL+++ ++E+QLPRI D I RY GL++
Sbjct: 93 DFFEEKELVVNVTKHELVPKHFLQTPEEKAALLERYKLKEQQLPRIKVTDPIARYLGLKR 152
Query: 175 GQVVK-VNYRGELSESHVAFRCVW 107
GQVVK + + +V++R V+
Sbjct: 153 GQVVKIIRENSPTAGRYVSYRLVF 176
[191][TOP]
>UniRef100_A7QJL5 Chromosome chr8 scaffold_106, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QJL5_VITVI
Length = 67
Score = 67.4 bits (163), Expect = 5e-10
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = -1
Query: 247 SIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCVW 107
S LPR+ ++DAI RYYGLEKGQVVKV Y GE++ SHV +RCVW
Sbjct: 21 SDSHSSLPRMLQQDAIARYYGLEKGQVVKVIYNGEITGSHVTYRCVW 67
[192][TOP]
>UniRef100_A9SWJ6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SWJ6_PHYPA
Length = 211
Score = 66.6 bits (161), Expect = 8e-10
Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAI--ELFSFKVEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E + + V+Q H+T + + I + + +E+F + LVNITE L P H++L
Sbjct: 91 MKRENVPRAVFVVQQHITPLSKQYISRKAQKYHLEVFLEPEFLVNITECYLVPLHEILTP 150
Query: 277 EDNPTLLKKFS----IEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
E+ TLL++++ + LP + D + RYYG+ GQVVK+ E + +V +R
Sbjct: 151 EEKNTLLERYTEGNPVMLVLLPWMQHNDPVARYYGINPGQVVKIIQSSETAGRYVTYR 208
[193][TOP]
>UniRef100_C5LN15 DNA-directed RNA polymerases II 24 kDa polypeptide, putative
(Fragment) n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5LN15_9ALVE
Length = 168
Score = 64.3 bits (155), Expect = 4e-09
Identities = 32/88 (36%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLND 278
+ ++ +S ILV+Q +T A AI+ S ++E+F ++L+VNIT H L P+H+ L
Sbjct: 63 MEEQRLSRAILVVQQPLTAFAKTAIQEASPQMEIEVFNESELVVNITHHELVPEHKPLTA 122
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAIVR 194
E+ LL+++ ++E QLPRI D +++
Sbjct: 123 EEKRLLLERYKVKENQLPRIQSSDPVMK 150
[194][TOP]
>UniRef100_Q3LW39 RNA polymerase I, II and III n=1 Tax=Bigelowiella natans
RepID=Q3LW39_BIGNA
Length = 204
Score = 62.8 bits (151), Expect = 1e-08
Identities = 31/110 (28%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Frame = -1
Query: 433 SGLILVLQNHVTNQALKAIELF--SFKVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTL 260
+ +I + + +++ Q A+ F +F +EIF ++L+N +H L P+H +L + +
Sbjct: 94 NSIIFITKRYLSKQTNIALSHFRRNFNIEIFFEYEILINPIKHFLVPKHVLLAPDIKRKI 153
Query: 259 LKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFRCV 110
LK +++++ QLP+I D I +YYG +KG + K+ E ++++R +
Sbjct: 154 LKSYNVKDSQLPKIKLSDPISKYYGAKKGNMFKIIRFSENIGVYLSYRII 203
[195][TOP]
>UniRef100_B6SJT2 DNA-directed RNA polymerase II 23 kDa polypeptide n=1 Tax=Zea mays
RepID=B6SJT2_MAIZE
Length = 154
Score = 60.8 bits (146), Expect = 4e-08
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAI-ELFSFKVEIFQITDLLVNITEHSLKPQHQVLNDE 275
+ E ++ LIL+LQ + + ++I E+F FKV+ FQIT+LLVNIT+H LKP+H+VL E
Sbjct: 92 VKDENLARLILILQGKIMSPTRESIKEIFRFKVDTFQITELLVNITKHVLKPKHEVLTAE 151
[196][TOP]
>UniRef100_A8BWP9 RNA polymerase II subunit Rpb5a n=2 Tax=Giardia intestinalis
RepID=A8BWP9_GIALA
Length = 229
Score = 60.1 bits (144), Expect = 7e-08
Identities = 29/81 (35%), Positives = 47/81 (58%)
Frame = -1
Query: 358 VEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLE 179
+E F +T LL+NIT+H L P+H +L++ + +LK++ E Q+P I D + RY GL
Sbjct: 146 IEHFLVTRLLINITKHVLVPKHVLLSEMEKSVVLKEYRCTEGQIPIIESSDPMARYLGLL 205
Query: 178 KGQVVKVNYRGELSESHVAFR 116
VV+++ E + FR
Sbjct: 206 PNDVVRISRPSETVGIYTTFR 226
[197][TOP]
>UniRef100_C6LZS6 RNA polymerase II subunit Rpb5a n=1 Tax=Giardia intestinalis ATCC
50581 RepID=C6LZS6_GIALA
Length = 229
Score = 59.7 bits (143), Expect = 1e-07
Identities = 29/81 (35%), Positives = 46/81 (56%)
Frame = -1
Query: 358 VEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLE 179
+E F +T LL+NIT H L P+H +L++ + +LK++ E Q+P I D + RY GL
Sbjct: 146 IEHFLVTRLLINITRHVLVPKHVLLSEMEKSVVLKEYRCTEGQIPIIESSDPMARYLGLL 205
Query: 178 KGQVVKVNYRGELSESHVAFR 116
VV+++ E + FR
Sbjct: 206 PNDVVRISRPSETVGIYTTFR 226
[198][TOP]
>UniRef100_B7EQI7 cDNA clone:J023098I05, full insert sequence n=1 Tax=Oryza sativa
Japonica Group RepID=B7EQI7_ORYSJ
Length = 167
Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/77 (37%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLND 278
+ QE++ ILV+Q ++ A A++ S F +E+FQ +LLVNI +H+L P+H++L
Sbjct: 89 MKQESVFNGILVVQQALSAFARSAVQEVSQKFHLEVFQEAELLVNIKDHTLVPEHELLTP 148
Query: 277 EDNPTLLKKFSIEEKQL 227
E TLL++++++E Q+
Sbjct: 149 EQKKTLLERYTVKETQV 165
[199][TOP]
>UniRef100_A9NTD1 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NTD1_PICSI
Length = 191
Score = 58.5 bits (140), Expect = 2e-07
Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFS--FKVEIFQITDLLVNITEHSLKPQHQVLND 278
+ E + ILV+Q +T A ++++ FS F +E+FQ +LLVNI EH L P+ Q+L
Sbjct: 89 MKSEGVFRAILVVQQALTPFARQSVQEFSGKFHLEVFQEAELLVNIKEHVLVPEQQILTP 148
Query: 277 EDNPTLLKKFSIEEKQL 227
E+ TLL++++++E Q+
Sbjct: 149 EEKKTLLERYTLKETQV 165
[200][TOP]
>UniRef100_Q4DY18 DNA-directed RNA polymerase II, putative n=1 Tax=Trypanosoma cruzi
RepID=Q4DY18_TRYCR
Length = 282
Score = 58.2 bits (139), Expect = 3e-07
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = -1
Query: 358 VEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLE 179
+++ + +L NI H PQH+VL+ E+ L++ I QLPRI K+D +V Y GL
Sbjct: 199 IQLLEEDELAYNIARHETVPQHEVLSPEEAQLFLQQRQISLSQLPRILKEDPMVAYLGLA 258
Query: 178 KGQVVKVNYRGELSESHVAFRCV 110
+G +VK++ + S + +R V
Sbjct: 259 RGSIVKIHRDTKESGPYEMYRQV 281
[201][TOP]
>UniRef100_Q8T1Q6 DNA-directed RNA polymerase II, putative n=1 Tax=Trypanosoma cruzi
RepID=Q8T1Q6_TRYCR
Length = 282
Score = 57.8 bits (138), Expect = 4e-07
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = -1
Query: 358 VEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLE 179
+++ + +L NI H PQH+VL+ E+ L++ I QLPRI K+D +V Y GL
Sbjct: 199 IQLLEEDELAYNIARHDTVPQHEVLSPEEARLFLQQRQISLSQLPRILKEDPMVAYLGLA 258
Query: 178 KGQVVKVNYRGELSESHVAFRCV 110
+G +VK++ + S + +R V
Sbjct: 259 RGSIVKIHRDTKESGPYEMYRQV 281
[202][TOP]
>UniRef100_C6LZX1 RNA polymerase II subunit Rpb5b n=1 Tax=Giardia intestinalis ATCC
50581 RepID=C6LZX1_GIALA
Length = 201
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Frame = -1
Query: 469 SVVADILSQETISGLILVLQNHVTNQALKAIELFS-FKVEIFQITDLLVNITEHSLKPQH 293
+ + L QE + + + T + + +++I+ + L+N T+HSL P+H
Sbjct: 80 AAIGQYLDQEAVQKCLFIYFGGPTTSCRSEHRVINDVEIDIYDFSQFLINPTKHSLVPKH 139
Query: 292 QVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELSESHVAFR 116
+L+ + +L + + E Q+P I D I+R+Y + G +++V + H+ +R
Sbjct: 140 TILSSTEKARVLAELRVTEAQIPLIQASDPIMRWYDAKPGDLIRVMRTSSSTGKHLYYR 198
[203][TOP]
>UniRef100_C5U6G3 RNA polymerase Rpb5 n=1 Tax=Methanocaldococcus infernus ME
RepID=C5U6G3_9EURY
Length = 78
Score = 56.6 bits (135), Expect = 8e-07
Identities = 26/73 (35%), Positives = 47/73 (64%)
Frame = -1
Query: 328 VNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYR 149
+ +T+H L P+H++L+ E+ LLKK I+ +QLP+I + D +++ G ++G VVK+
Sbjct: 1 MKVTDHILVPKHEILSKEEVEELLKKLRIKIQQLPKIYEDDPVIQEIGAKEGDVVKIIRE 60
Query: 148 GELSESHVAFRCV 110
+ + VA+R V
Sbjct: 61 SPTAGTFVAYRLV 73
[204][TOP]
>UniRef100_C9RDL1 RNA polymerase Rpb5 n=1 Tax=Methanocaldococcus vulcanius M7
RepID=C9RDL1_9EURY
Length = 84
Score = 55.5 bits (132), Expect = 2e-06
Identities = 22/75 (29%), Positives = 48/75 (64%)
Frame = -1
Query: 334 LLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVN 155
+++ +T H L P+H+++ E+ +LKK++I+ +QLP+I + D +++ G ++G V+K+
Sbjct: 5 IILKVTNHILVPKHEIVPKEEVDEILKKYNIKIQQLPKIYEDDPVIQEIGAKEGDVIKIT 64
Query: 154 YRGELSESHVAFRCV 110
+ +A+R V
Sbjct: 65 RNSPTAGLSIAYRLV 79
[205][TOP]
>UniRef100_B5IVZ7 RNA polymerase Rpb5, C-terminal domain n=1 Tax=Thermococcus
barophilus MP RepID=B5IVZ7_9EURY
Length = 82
Score = 54.3 bits (129), Expect = 4e-06
Identities = 25/72 (34%), Positives = 43/72 (59%)
Frame = -1
Query: 325 NITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRG 146
NI +H L P+H+VL++E+ LLKK+ I+ QLP+I KD V G + G ++++ +
Sbjct: 8 NIFDHELVPEHRVLSEEEKEELLKKYRIKISQLPQIKAKDPAVVALGAKPGDIIEIKRKS 67
Query: 145 ELSESHVAFRCV 110
+ + +R V
Sbjct: 68 PTAGVYYYYRIV 79
[206][TOP]
>UniRef100_A8B5W9 RNA polymerase II subunit Rpb5b n=2 Tax=Giardia intestinalis
RepID=A8B5W9_GIALA
Length = 201
Score = 53.9 bits (128), Expect = 5e-06
Identities = 22/82 (26%), Positives = 46/82 (56%)
Frame = -1
Query: 361 KVEIFQITDLLVNITEHSLKPQHQVLNDEDNPTLLKKFSIEEKQLPRISKKDAIVRYYGL 182
+V+I + L+N T+H L P+H +L++ + +L + + E Q+P I D I+R+Y
Sbjct: 117 EVDIHDFSQFLINPTKHRLVPKHTILSNTEKARVLAELRVTEAQIPLIQTSDPIMRWYDA 176
Query: 181 EKGQVVKVNYRGELSESHVAFR 116
+ G ++++ + H+ +R
Sbjct: 177 KPGDLIRITRTSGSAGKHLYYR 198
[207][TOP]
>UniRef100_UPI000051A7F2 PREDICTED: similar to Rpb5 CG11979-PA n=1 Tax=Apis mellifera
RepID=UPI000051A7F2
Length = 179
Score = 53.5 bits (127), Expect = 7e-06
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Frame = -1
Query: 451 LSQETISGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITEHSLKPQHQVLND 278
+ +E I I+V+Q +T A +++ + K +E F ++LL+NITEH L P+H VL
Sbjct: 94 MQEEKIHRAIIVVQQGMTPSAKQSLVDMAPKYILEQFLESELLINITEHELVPEHIVLTP 153
Query: 277 EDNPTLLKKFSIEEKQLPRISKKDAI 200
++ LL ++ ++E QL RI D +
Sbjct: 154 DEKEELLTRYKLKENQLMRIQAGDPV 179