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[1][TOP]
>UniRef100_O24621 Sigma factor 3 n=1 Tax=Arabidopsis thaliana RepID=O24621_ARATH
          Length = 571

 Score =  191 bits (486), Expect = 2e-47
 Identities = 96/96 (100%), Positives = 96/96 (100%)
 Frame = +1

Query: 1   RKVKKKARRSSVTAENGDQSSLPIGLRTTWNNIDVPRVRRPPKYRKKRERISRNETEMST 180
           RKVKKKARRSSVTAENGDQSSLPIGLRTTWNNIDVPRVRRPPKYRKKRERISRNETEMST
Sbjct: 224 RKVKKKARRSSVTAENGDQSSLPIGLRTTWNNIDVPRVRRPPKYRKKRERISRNETEMST 283

Query: 181 GVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNE 288
           GVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNE
Sbjct: 284 GVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNE 319

[2][TOP]
>UniRef100_O22058 Plastid RNA polymerase sigma-subunit n=1 Tax=Arabidopsis thaliana
           RepID=O22058_ARATH
          Length = 571

 Score =  191 bits (486), Expect = 2e-47
 Identities = 96/96 (100%), Positives = 96/96 (100%)
 Frame = +1

Query: 1   RKVKKKARRSSVTAENGDQSSLPIGLRTTWNNIDVPRVRRPPKYRKKRERISRNETEMST 180
           RKVKKKARRSSVTAENGDQSSLPIGLRTTWNNIDVPRVRRPPKYRKKRERISRNETEMST
Sbjct: 224 RKVKKKARRSSVTAENGDQSSLPIGLRTTWNNIDVPRVRRPPKYRKKRERISRNETEMST 283

Query: 181 GVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNE 288
           GVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNE
Sbjct: 284 GVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNE 319

[3][TOP]
>UniRef100_Q9MTH2 Sigma factor 3 n=1 Tax=Sinapis alba RepID=Q9MTH2_SINAL
          Length = 567

 Score =  139 bits (351), Expect = 8e-32
 Identities = 71/96 (73%), Positives = 78/96 (81%)
 Frame = +1

Query: 1   RKVKKKARRSSVTAENGDQSSLPIGLRTTWNNIDVPRVRRPPKYRKKRERISRNETEMST 180
           RK++KKAR       NGDQ S  I  RTTW  IDVPRVR+P KYRKKRERISRNE EMS 
Sbjct: 225 RKLRKKARTG-----NGDQGSSTISSRTTWEGIDVPRVRKPSKYRKKRERISRNEAEMSQ 279

Query: 181 GVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNE 288
           GVKIVADMERIRT+LEEE+GKVAS+SCWA AAGMN+
Sbjct: 280 GVKIVADMERIRTKLEEETGKVASMSCWAEAAGMNQ 315

[4][TOP]
>UniRef100_B9HE05 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HE05_POPTR
          Length = 559

 Score = 84.3 bits (207), Expect = 4e-15
 Identities = 43/98 (43%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
 Frame = +1

Query: 1   RKVKKKARRSSVTAENGDQS-SLPIGLRTTWNNIDVPR-VRRPPKYRKKRERISRNETEM 174
           +K ++K RR    ++NG ++ SL +  +T  NN+  P  V+R      +R  I+RNE +M
Sbjct: 211 KKEERKFRRERAASDNGKKTTSLSLPSKTVQNNLPKPTFVKRTSSSSSRRSLIARNEAKM 270

Query: 175 STGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNE 288
           + GVK+ +D+ERIRT LEEE+G+V SLSCWA A G+++
Sbjct: 271 TRGVKVASDLERIRTTLEEETGQVVSLSCWAEATGLDK 308

[5][TOP]
>UniRef100_B9RRX0 RNA polymerase sigma factor rpoD, putative n=1 Tax=Ricinus communis
           RepID=B9RRX0_RICCO
          Length = 560

 Score = 82.0 bits (201), Expect = 2e-14
 Identities = 44/99 (44%), Positives = 65/99 (65%), Gaps = 4/99 (4%)
 Frame = +1

Query: 1   RKVKKKARRSSVTAENGDQS-SLPIGLRTTWNNIDVPRVRRPPKYRKKRER---ISRNET 168
           +K ++K+RR   +A  G +S SLP+  R   +  + P V    K  K + R   I+RNE 
Sbjct: 210 KKEERKSRRERASARKGHKSPSLPLPSRPIQSGSEKPTVSSGKKASKSKSRRLIIARNEA 269

Query: 169 EMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMN 285
           EM+ G+K++AD+E+IRT LEEE+ +V SLSCWA AAG++
Sbjct: 270 EMARGIKVLADLEKIRTTLEEETERVVSLSCWAEAAGLD 308

[6][TOP]
>UniRef100_Q8L7P7 Sigma factor SigC n=1 Tax=Arabidopsis thaliana RepID=Q8L7P7_ARATH
          Length = 291

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = +1

Query: 172 MSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNE 288
           MSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNE
Sbjct: 1   MSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNE 39

[7][TOP]
>UniRef100_A7P4G3 Chromosome chr4 scaffold_6, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7P4G3_VITVI
          Length = 561

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
 Frame = +1

Query: 1   RKVKKKARRSSVTAENGDQSSLPIGLRTTWNNIDVPRV---RRPPKYRKKRERISRNETE 171
           +K ++K++R     +  +  + P+  +T       P V   +R    R+KR   ++NE E
Sbjct: 212 KKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAE 271

Query: 172 MSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNE 288
           MS GVK+VA++ERIR  LEEE G VASLS WA AAG+++
Sbjct: 272 MSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDK 310

[8][TOP]
>UniRef100_A5BHR4 Putative uncharacterized protein n=1 Tax=Vitis vinifera
           RepID=A5BHR4_VITVI
          Length = 611

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
 Frame = +1

Query: 1   RKVKKKARRSSVTAENGDQSSLPIGLRTTWNNIDVPRV---RRPPKYRKKRERISRNETE 171
           +K ++K++R     +  +  + P+  +T       P V   +R    R+KR   ++NE E
Sbjct: 262 KKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAE 321

Query: 172 MSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNE 288
           MS GVK+VA++ERIR  LEEE G VASLS WA AAG+++
Sbjct: 322 MSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDK 360

[9][TOP]
>UniRef100_Q710C2 Sigma factor (Fragment) n=1 Tax=Spinacia oleracea
           RepID=Q710C2_SPIOL
          Length = 548

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 29/62 (46%), Positives = 44/62 (70%)
 Frame = +1

Query: 103 VPRVRRPPKYRKKRERISRNETEMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGM 282
           V    +  K R +R  I++NE EMS G+K+VA +E+++  LE+E+GK  SL+CWA AAG+
Sbjct: 237 VSTAAKKTKARGRRAIIAKNEAEMSRGIKVVAQLEKVKLTLEKETGKAVSLNCWAEAAGI 296

Query: 283 NE 288
           +E
Sbjct: 297 DE 298