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[1][TOP]
>UniRef100_Q9FUZ2 Peptide deformylase 1B, chloroplastic n=1 Tax=Arabidopsis thaliana
RepID=DEF1B_ARATH
Length = 273
Score = 369 bits (947), Expect = e-101
Identities = 186/186 (100%), Positives = 186/186 (100%)
Frame = +1
Query: 1 AVCNCFLQAPPLSRILLPVLSRRATTLSAGYGRLKSTVTFCSTVNRTSPLTSSVRAEVKR 180
AVCNCFLQAPPLSRILLPVLSRRATTLSAGYGRLKSTVTFCSTVNRTSPLTSSVRAEVKR
Sbjct: 2 AVCNCFLQAPPLSRILLPVLSRRATTLSAGYGRLKSTVTFCSTVNRTSPLTSSVRAEVKR 61
Query: 181 VSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDG 360
VSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDG
Sbjct: 62 VSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDG 121
Query: 361 IGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEV 540
IGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEV
Sbjct: 122 IGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEV 181
Query: 541 VRPQSV 558
VRPQSV
Sbjct: 182 VRPQSV 187
[2][TOP]
>UniRef100_B9S632 Polypeptide deformylase, putative n=1 Tax=Ricinus communis
RepID=B9S632_RICCO
Length = 282
Score = 216 bits (549), Expect = 1e-54
Identities = 112/175 (64%), Positives = 137/175 (78%), Gaps = 3/175 (1%)
Frame = +1
Query: 43 ILLPVLSRRA--TTLSAGYGRLKSTVTFCSTVNRTSPLTSSVRAEVKR-VSRKDDKVASA 213
+LLPVL R+ + + + +L ST F S P + VRA+ KR S K++++A+
Sbjct: 25 LLLPVLFRQTGFSCNNFRFNQLSSTARFSSIAK---PPSIPVRAQAKRSFSFKEEEIATP 81
Query: 214 TDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLN 393
D+ FE PLKIVEYPDPILR KNKRID FD+NLK LVD MFDVMYKTDGIGLSAPQVG+N
Sbjct: 82 ADLCFEEPLKIVEYPDPILRRKNKRIDTFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGIN 141
Query: 394 VQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
VQLMVFNP GE GEG+EIVL+NP++ KYS K+VPF+EGCLSFPGIYA+V+RP+SV
Sbjct: 142 VQLMVFNPVGERGEGEEIVLINPRLNKYSKKIVPFNEGCLSFPGIYADVLRPESV 196
[3][TOP]
>UniRef100_B9GI48 Peptide deformylase (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9GI48_POPTR
Length = 258
Score = 211 bits (538), Expect = 2e-53
Identities = 115/177 (64%), Positives = 134/177 (75%), Gaps = 2/177 (1%)
Frame = +1
Query: 34 LSR-ILLPVLSRRATTLSAGYGRLKSTVTFCSTVNRTSPLTSSVRAEVKRVS-RKDDKVA 207
LSR +LLP L R TL + F ST+ + P + VR++ KR K D+VA
Sbjct: 1 LSRALLLPYLHSRTQTLCEPIRLAR----FSSTMKQPRPPSLFVRSQAKRGPFLKQDQVA 56
Query: 208 SATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVG 387
+ +D++FE PLKIVEYPDPILRAKNKRID FD+NLK LVD MFDVMYKTDGIGLSAPQVG
Sbjct: 57 ATSDLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVDEMFDVMYKTDGIGLSAPQVG 116
Query: 388 LNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+NVQLMVFNPA E GEG EIVLVNP++ KYS K V F+EGCLSFPGIYA+V RP+SV
Sbjct: 117 INVQLMVFNPADEHGEGDEIVLVNPRVNKYSKKTVLFNEGCLSFPGIYADVKRPESV 173
[4][TOP]
>UniRef100_A7PM79 Chromosome chr14 scaffold_21, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PM79_VITVI
Length = 275
Score = 210 bits (535), Expect = 5e-53
Identities = 114/189 (60%), Positives = 137/189 (72%), Gaps = 3/189 (1%)
Frame = +1
Query: 1 AVCNCFLQAPPLSRILLPVLSRRA--TTLSAGYGRLKSTVTFCSTVNRTSPLTSSVRAEV 174
A +C L + LS LP+L R+ +T ++ R S F S+ NR V+ +
Sbjct: 2 AFASC-LHSSYLSNTFLPILRHRSALSTSTSHLHRFCSPSRFFSSANRFRLPLMQVQVQA 60
Query: 175 KR-VSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYK 351
KR S K++ +AS D+ FE PLKIVEYPDPILRAKNK I FD+NLK LVD MFDVMYK
Sbjct: 61 KRGFSFKEEVIASPADLSFEAPLKIVEYPDPILRAKNKLISTFDDNLKKLVDEMFDVMYK 120
Query: 352 TDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIY 531
TDGIGLSAPQVG+NVQLMVFNP GE GEG+EIVLVNP++ KYS K+V F+EGCLSFPGIY
Sbjct: 121 TDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSKKIVLFNEGCLSFPGIY 180
Query: 532 AEVVRPQSV 558
A+V RP+SV
Sbjct: 181 ADVERPESV 189
[5][TOP]
>UniRef100_Q9FV54 Peptide deformylase 1B, chloroplastic n=1 Tax=Solanum lycopersicum
RepID=DEF1B_SOLLC
Length = 279
Score = 201 bits (510), Expect = 4e-50
Identities = 103/179 (57%), Positives = 130/179 (72%), Gaps = 5/179 (2%)
Frame = +1
Query: 37 SRILLPVLSRRATTLSAGYG--RLKSTVTFCSTVNRTSPLTSSVRAEVKRV---SRKDDK 201
+R L P+LSR ++ Y R KS + + P +V A+ +RV K D+
Sbjct: 15 TRFLRPLLSRNSSPSPISYSLHRYKSANCLFFSASSNKPPKLAVYAQARRVLSSKTKGDE 74
Query: 202 VASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQ 381
+A+ D+ F PLKIVEYPDPILRAKNKRID FD NLK LVD MFD+MYKTDGIGLSAPQ
Sbjct: 75 IATPADLSFVVPLKIVEYPDPILRAKNKRIDNFDANLKKLVDEMFDIMYKTDGIGLSAPQ 134
Query: 382 VGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
VG+NVQLMVFN AGE GEG+EIVLVNP++ +YS +++P++EGCLSFP I+ +V RP+SV
Sbjct: 135 VGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPYEEGCLSFPMIHGDVKRPESV 193
[6][TOP]
>UniRef100_B9EY95 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9EY95_ORYSJ
Length = 267
Score = 186 bits (473), Expect = 8e-46
Identities = 88/123 (71%), Positives = 107/123 (86%)
Frame = +1
Query: 190 KDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGL 369
+D+ A+A D+QFE PLK+V+YPDPILRA+NKRI+ FD+NL++L D MFDVMYKTDGIGL
Sbjct: 62 EDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGL 121
Query: 370 SAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRP 549
SAPQVG+NVQLMVFNPAG GEG+EIVLVNP + K S +L+ ++EGCLSFPGIYA VVRP
Sbjct: 122 SAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEEGCLSFPGIYANVVRP 181
Query: 550 QSV 558
+V
Sbjct: 182 DNV 184
[7][TOP]
>UniRef100_Q5VNN5 Peptide deformylase 1B, chloroplastic n=1 Tax=Oryza sativa Japonica
Group RepID=DEF1B_ORYSJ
Length = 269
Score = 186 bits (473), Expect = 8e-46
Identities = 88/123 (71%), Positives = 107/123 (86%)
Frame = +1
Query: 190 KDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGL 369
+D+ A+A D+QFE PLK+V+YPDPILRA+NKRI+ FD+NL++L D MFDVMYKTDGIGL
Sbjct: 62 EDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGL 121
Query: 370 SAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRP 549
SAPQVG+NVQLMVFNPAG GEG+EIVLVNP + K S +L+ ++EGCLSFPGIYA VVRP
Sbjct: 122 SAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEEGCLSFPGIYANVVRP 181
Query: 550 QSV 558
+V
Sbjct: 182 DNV 184
[8][TOP]
>UniRef100_B9EY90 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9EY90_ORYSJ
Length = 260
Score = 184 bits (467), Expect = 4e-45
Identities = 87/123 (70%), Positives = 106/123 (86%)
Frame = +1
Query: 190 KDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGL 369
+D+ A+A D+QFE PLK+V+YPDPILRA+NKRI+ FD+NL++L D MFDVMYKTDGIGL
Sbjct: 42 EDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGL 101
Query: 370 SAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRP 549
SAPQVG+NVQLMVFNPAG GEG+EIVLVNP + K S +L+ ++E CLSFPGIYA VVRP
Sbjct: 102 SAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEESCLSFPGIYANVVRP 161
Query: 550 QSV 558
+V
Sbjct: 162 DNV 164
[9][TOP]
>UniRef100_B8ACB8 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8ACB8_ORYSI
Length = 997
Score = 184 bits (467), Expect = 4e-45
Identities = 87/123 (70%), Positives = 106/123 (86%)
Frame = +1
Query: 190 KDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGL 369
+D+ A+A D+QFE PLK+V+YPDPILRA+NKRI+ FD+NL++L D MFDVMYKTDGIGL
Sbjct: 779 EDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGL 838
Query: 370 SAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRP 549
SAPQVG+NVQLMVFNPAG GEG+EIVLVNP + K S +L+ ++E CLSFPGIYA VVRP
Sbjct: 839 SAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEESCLSFPGIYANVVRP 898
Query: 550 QSV 558
+V
Sbjct: 899 DNV 901
[10][TOP]
>UniRef100_C6T1P9 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T1P9_SOYBN
Length = 221
Score = 180 bits (457), Expect = 6e-44
Identities = 94/139 (67%), Positives = 108/139 (77%), Gaps = 1/139 (0%)
Frame = +1
Query: 145 PLTSSVRAEVKRV-SRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNL 321
P T+ RA K S D VAS D +F PLKIVEYPDP LRA+NKRI FD++LK L
Sbjct: 43 PRTAPPRAMAKPCFSPAQDLVASPGDFEFVLPLKIVEYPDPRLRARNKRIVAFDDSLKKL 102
Query: 322 VDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFD 501
V MFDVMYKTDGIGLSAPQ+G+NVQLMVFNP GE GEG+EIVLVNP++ +YS KL F+
Sbjct: 103 VHEMFDVMYKTDGIGLSAPQLGINVQLMVFNPVGEHGEGEEIVLVNPRVSQYSKKLTLFN 162
Query: 502 EGCLSFPGIYAEVVRPQSV 558
EGCLSFPGI A+V RP+SV
Sbjct: 163 EGCLSFPGINADVKRPESV 181
[11][TOP]
>UniRef100_C5XEI7 Putative uncharacterized protein Sb03g029040 n=1 Tax=Sorghum
bicolor RepID=C5XEI7_SORBI
Length = 264
Score = 180 bits (456), Expect = 7e-44
Identities = 85/118 (72%), Positives = 104/118 (88%)
Frame = +1
Query: 205 ASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQV 384
A+ATD++FE+PL++V+YPDPILRA+NKRI+ FD NL+ L D MFDVMYKTDGIGLSAPQV
Sbjct: 62 ATATDLRFESPLEVVKYPDPILRARNKRINAFDANLRALADEMFDVMYKTDGIGLSAPQV 121
Query: 385 GLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
G+NVQLMVFNPAG GEG+EIVLVNP + K + +L+ F+EGCLSFPGIY V+RP+SV
Sbjct: 122 GVNVQLMVFNPAGVKGEGEEIVLVNPVVYKSAKRLLVFEEGCLSFPGIYGNVLRPESV 179
[12][TOP]
>UniRef100_C7IXK1 Os01g0636600 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group
RepID=C7IXK1_ORYSJ
Length = 198
Score = 177 bits (450), Expect = 4e-43
Identities = 84/118 (71%), Positives = 102/118 (86%)
Frame = +1
Query: 190 KDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGL 369
+D+ A+A D+QFE PLK+V+YPDPILRA+NKRI+ FD+NL++L D MFDVMYKTDGIGL
Sbjct: 66 EDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGL 125
Query: 370 SAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVV 543
SAPQVG+NVQLMVFNPAG GEG+EIVLVNP + K S +L+ ++E CLSFPGIYA VV
Sbjct: 126 SAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEESCLSFPGIYANVV 183
[13][TOP]
>UniRef100_A9NUU5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NUU5_PICSI
Length = 290
Score = 171 bits (433), Expect = 3e-41
Identities = 83/131 (63%), Positives = 107/131 (81%)
Frame = +1
Query: 166 AEVKRVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVM 345
+E++++ ++D A+++Q+E PLKIV+YPD LRAKNK I+IFDE L+ L D MFD+M
Sbjct: 88 SELRKMKEEED---FASELQYELPLKIVKYPDSRLRAKNKPINIFDEKLQRLADEMFDLM 144
Query: 346 YKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPG 525
YKTDG+GLSAPQVG+NVQLMVFNPAGE G+G+E++LVNP+I KYS + F EGCLSFP
Sbjct: 145 YKTDGVGLSAPQVGVNVQLMVFNPAGESGKGEEVILVNPEIYKYSKRKEVFTEGCLSFPE 204
Query: 526 IYAEVVRPQSV 558
IYA+V RP SV
Sbjct: 205 IYADVERPMSV 215
[14][TOP]
>UniRef100_Q5VNP3 Peptide deformylase-like n=1 Tax=Oryza sativa Japonica Group
RepID=Q5VNP3_ORYSJ
Length = 326
Score = 160 bits (404), Expect = 8e-38
Identities = 84/155 (54%), Positives = 102/155 (65%), Gaps = 38/155 (24%)
Frame = +1
Query: 208 SATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMY------------- 348
+A D+QFE PLK+V+YPDPILRA+NKRI+ FD+NL++L D MFDVMY
Sbjct: 87 AAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYNASDSICVTLLNK 146
Query: 349 -------------------------KTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVL 453
+TDGIGLSAPQVG+NVQLMVFNPAG GEG+EIVL
Sbjct: 147 QIKKGLLSTIAREDIPPIEPLVSCYRTDGIGLSAPQVGVNVQLMVFNPAGVKGEGEEIVL 206
Query: 454 VNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
VNP + K S +L+ ++E CLSFPGIYA VVRP +V
Sbjct: 207 VNPVVYKMSKRLLVYEESCLSFPGIYANVVRPDNV 241
[15][TOP]
>UniRef100_A9TMS8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TMS8_PHYPA
Length = 202
Score = 147 bits (372), Expect = 4e-34
Identities = 75/127 (59%), Positives = 94/127 (74%), Gaps = 10/127 (7%)
Frame = +1
Query: 208 SATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVG 387
SA ++F++PL+++ YPDP LRAKNK I +FD+ L+ LV+ M DVMYKTDG+GL+APQVG
Sbjct: 1 SAGPLEFDSPLEVILYPDPRLRAKNKFIKVFDDKLQQLVNEMLDVMYKTDGVGLAAPQVG 60
Query: 388 LNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFP----------GIYAE 537
+NV+LMV+NP+GE G GKE VLVNP+I KY FDEGCLSFP I AE
Sbjct: 61 VNVRLMVYNPSGERGSGKEYVLVNPRIVKYGKSRDLFDEGCLSFPVLERGPNQSLTIEAE 120
Query: 538 VVRPQSV 558
V RP+SV
Sbjct: 121 VERPKSV 127
[16][TOP]
>UniRef100_C1MGI0 Peptide deformylase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MGI0_9CHLO
Length = 210
Score = 142 bits (359), Expect = 1e-32
Identities = 69/131 (52%), Positives = 97/131 (74%)
Frame = +1
Query: 166 AEVKRVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVM 345
+E+ ++ ++D +A V+F PL+I +YP LR +NK+I +FD LK L DAMF M
Sbjct: 15 SELSEIAEENDATGAA--VEFALPLEIQKYPSAKLRDENKKIGVFDAELKKLADAMFAKM 72
Query: 346 YKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPG 525
Y++DG+GL+APQVG+N +LMV+N AGE G+G E+V+VNPKI K+S + F+EGCLSFP
Sbjct: 73 YESDGVGLAAPQVGVNYRLMVYNEAGERGKGAEVVMVNPKIVKFSKEKDMFEEGCLSFPA 132
Query: 526 IYAEVVRPQSV 558
IYA+V RP +V
Sbjct: 133 IYADVERPTAV 143
[17][TOP]
>UniRef100_C1FF41 Peptide deformylase, chloroplast n=1 Tax=Micromonas sp. RCC299
RepID=C1FF41_9CHLO
Length = 257
Score = 139 bits (350), Expect = 1e-31
Identities = 67/117 (57%), Positives = 85/117 (72%)
Frame = +1
Query: 208 SATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVG 387
S V+F PL I +YP LR NK + +FD +L+ L AMF +MY T+G+GL+APQVG
Sbjct: 74 SGAKVEFTLPLAIQKYPHASLRNDNKIVGVFDSDLEKLAQAMFKIMYDTEGVGLAAPQVG 133
Query: 388 LNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+N ++MV+N AGEPG GKE+VLVNPKI K+S F+EGCLSFP IYA+V RP SV
Sbjct: 134 VNYRMMVYNEAGEPGRGKEVVLVNPKIVKFSKTKDLFEEGCLSFPKIYADVERPTSV 190
[18][TOP]
>UniRef100_Q01BT3 Peptide deformylase (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q01BT3_OSTTA
Length = 175
Score = 134 bits (337), Expect = 5e-30
Identities = 69/136 (50%), Positives = 95/136 (69%), Gaps = 1/136 (0%)
Frame = +1
Query: 136 RTSPLTSSVRAEVKRVSRKDDKVASATD-VQFETPLKIVEYPDPILRAKNKRIDIFDENL 312
RT + E++ + R + AS+++ V + PL I +YP P LRAKN I+ FD NL
Sbjct: 34 RTEAKKGFLFGELEDMKRGESGGASSSESVAWSEPLAIAKYPAPCLRAKNAPIETFDANL 93
Query: 313 KNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLV 492
+ L AMF +MY+T G GL+APQVG+N ++MV+N AGEPG+G+E+VL NPKI KYS +
Sbjct: 94 EQLSKAMFKIMYETVGCGLAAPQVGVNYRMMVYNEAGEPGKGREVVLCNPKIVKYSKEKD 153
Query: 493 PFDEGCLSFPGIYAEV 540
F+EGCLSFP +YA+V
Sbjct: 154 FFEEGCLSFPKMYADV 169
[19][TOP]
>UniRef100_A4RVA1 Peptide deformylase, organellar n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4RVA1_OSTLU
Length = 240
Score = 134 bits (336), Expect = 6e-30
Identities = 67/134 (50%), Positives = 94/134 (70%), Gaps = 4/134 (2%)
Frame = +1
Query: 169 EVKRVSRKDDKVAS----ATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMF 336
EV+ +SR+ + A V++ PL I +YP LRAKN ++ FD+NL+ L AMF
Sbjct: 39 EVENLSREGEGTKGDDEDAKSVRWSEPLAIAKYPAKCLRAKNAPVETFDKNLERLSKAMF 98
Query: 337 DVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLS 516
+MY+T G GL+APQVG+N ++MV+N AGEPG+G+E+VL NP+I K+S + F+EGCLS
Sbjct: 99 KIMYETVGCGLAAPQVGVNYRMMVYNEAGEPGQGREVVLCNPEIVKFSKEKDLFEEGCLS 158
Query: 517 FPGIYAEVVRPQSV 558
FP +YA+V RP V
Sbjct: 159 FPKMYADVERPIGV 172
[20][TOP]
>UniRef100_A8HMG1 Peptide deformylase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8HMG1_CHLRE
Length = 248
Score = 123 bits (308), Expect = 1e-26
Identities = 59/123 (47%), Positives = 85/123 (69%)
Frame = +1
Query: 190 KDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGL 369
K +V T +++ +PL+I++YPDP LRA N +I++FDE+L L M ++MY+ DG+GL
Sbjct: 40 KLQEVPVVTKLEWTSPLQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGL 99
Query: 370 SAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRP 549
+APQVG+NV+LMVFNP G G E +LVNP+I + +EGCLSFP IY +V R
Sbjct: 100 AAPQVGVNVRLMVFNPMGRDKPGNESILVNPEIVEQLGGKELGEEGCLSFPRIYGDVERS 159
Query: 550 QSV 558
+ +
Sbjct: 160 RQI 162
[21][TOP]
>UniRef100_Q7XYP8 Peptide deformylase n=1 Tax=Bigelowiella natans RepID=Q7XYP8_BIGNA
Length = 315
Score = 116 bits (291), Expect = 1e-24
Identities = 58/119 (48%), Positives = 81/119 (68%), Gaps = 1/119 (0%)
Frame = +1
Query: 205 ASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQV 384
++ +Q++ PL +++YPDP LR +N++I F + L+ L D MFDVMY DG GL+APQV
Sbjct: 111 STTASIQWKGPLNVIKYPDPRLRTENEKITEFGKPLQELADEMFDVMYDDDGCGLAAPQV 170
Query: 385 GLNVQLMVFNPAGE-PGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
G+N +LMVFNP G+ + E+VL NP+I ++ F EGCLSFPGI +V RP V
Sbjct: 171 GINYRLMVFNPQGDRRKKDTEMVLANPEIISSGEEKDWFREGCLSFPGIRGQVERPTKV 229
[22][TOP]
>UniRef100_B4WHK1 Peptide deformylase n=1 Tax=Synechococcus sp. PCC 7335
RepID=B4WHK1_9SYNE
Length = 187
Score = 103 bits (256), Expect = 1e-20
Identities = 51/108 (47%), Positives = 69/108 (63%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL + + D +LR KR+ D L++LV M MY DGIGL+APQVG+N QL+V +
Sbjct: 16 PLTVHQMGDRVLRQPAKRVAKIDNALRDLVRKMLQTMYSEDGIGLAAPQVGVNKQLLVID 75
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E +VLVNPKI +YSD+L EGCLS PG+Y +V+RP ++
Sbjct: 76 ADPENEAASALVLVNPKIIRYSDELAAGQEGCLSIPGVYLDVIRPAAI 123
[23][TOP]
>UniRef100_A9BES0 Peptide deformylase n=1 Tax=Petrotoga mobilis SJ95
RepID=A9BES0_PETMO
Length = 178
Score = 102 bits (254), Expect = 2e-20
Identities = 46/100 (46%), Positives = 74/100 (74%)
Frame = +1
Query: 259 DPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEG 438
DP+LR + K+++ FD+NLK++VD MF MY DG+GL+APQVG++++ + + E +G
Sbjct: 8 DPVLRKRAKKVENFDDNLKDVVDEMFSTMYLYDGVGLAAPQVGISLRFFIMDSREENEKG 67
Query: 439 KEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
K++V +NP+I ++ + V F+EGCLS P I+ +VVRP+ V
Sbjct: 68 KKVV-INPEIIEFLGEEVSFEEGCLSIPDIFEDVVRPEGV 106
[24][TOP]
>UniRef100_B1XJP0 Peptide deformylase n=1 Tax=Synechococcus sp. PCC 7002
RepID=DEF_SYNP2
Length = 187
Score = 102 bits (253), Expect = 3e-20
Identities = 47/108 (43%), Positives = 70/108 (64%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL++ D +LR K KRI D+ ++ L M MY + GIGL+APQVG+N +L+V +
Sbjct: 16 PLELHYLGDKVLRQKAKRIAKVDDEIRTLAKEMLQTMYSSQGIGLAAPQVGVNKRLIVID 75
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E +VL+NP+IKK+ +L PF+EGCLS PG++ +V+RP +
Sbjct: 76 TDPENPANAPLVLINPEIKKFGQQLCPFEEGCLSIPGVHLDVIRPDEI 123
[25][TOP]
>UniRef100_Q2IA88 Chloroplast peptide deformylase (Fragment) n=1 Tax=Isochrysis
galbana RepID=Q2IA88_ISOGA
Length = 200
Score = 101 bits (252), Expect = 3e-20
Identities = 51/106 (48%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Frame = +1
Query: 232 TPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVF 411
T L+I+EYP P+LRA N + FD++L+ L MF +MY + G+GL+APQ+G+N +LMVF
Sbjct: 82 TDLRILEYPHPLLRAPNSEVVSFDDSLRKLTREMFAIMYASRGVGLAAPQLGINKRLMVF 141
Query: 412 NPAGEPGEG-KEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVR 546
NP G+ + E+VL NP+I + +EGCLSFPG A+V R
Sbjct: 142 NPEGKKEKWMSEVVLCNPRIVERGAGKETDEEGCLSFPGFTADVDR 187
[26][TOP]
>UniRef100_Q8I372 Formylmethionine deformylase, putative n=1 Tax=Plasmodium
falciparum 3D7 RepID=Q8I372_PLAF7
Length = 241
Score = 101 bits (252), Expect = 3e-20
Identities = 52/108 (48%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+KIV+YPDPILR +++ + FD+NLK +V MFD+MY++ GIGLSAPQV ++ +++V+N
Sbjct: 65 IKIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWNA 124
Query: 418 AGEP-GEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E E E + +NP I + S + EGCLSFPGI +V RP V
Sbjct: 125 LYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIV 172
[27][TOP]
>UniRef100_B5W5I1 Peptide deformylase n=1 Tax=Arthrospira maxima CS-328
RepID=B5W5I1_SPIMA
Length = 187
Score = 100 bits (249), Expect = 7e-20
Identities = 50/108 (46%), Positives = 68/108 (62%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL I D +LR KR+ D+ ++ LV M MY DGIGL+APQVG++ Q++V +
Sbjct: 16 PLDIHYLGDRVLRQPAKRVSRIDDEIRQLVREMLQTMYSADGIGLAAPQVGVHKQVIVID 75
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ +VL+NP IKK S +L PF EGCLS PG+Y +VVRP+ V
Sbjct: 76 CEPDNAATPPLVLINPTIKKSSRELSPFQEGCLSIPGVYMDVVRPEEV 123
[28][TOP]
>UniRef100_Q4X930 Formylmethionine deformylase, putative (Fragment) n=1
Tax=Plasmodium chabaudi RepID=Q4X930_PLACH
Length = 132
Score = 97.4 bits (241), Expect = 6e-19
Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Frame = +1
Query: 229 ETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMV 408
E LKIV YP+P+LR K++ + FD+NLK+LV MF MY++ GIGLSAPQV ++ +++V
Sbjct: 15 ENDLKIVMYPNPVLRQKSEEVLYFDDNLKDLVRRMFKTMYESKGIGLSAPQVNISKRIIV 74
Query: 409 FNPAGEPGEGK-EIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+N E + K E V +NP I + S EGCLSFP I A+V RP V
Sbjct: 75 WNALYEKRDEKNERVFINPSIIQESAVKNKLVEGCLSFPNIEAKVERPAIV 125
[29][TOP]
>UniRef100_Q7V3K7 Peptide deformylase n=1 Tax=Prochlorococcus marinus subsp. pastoris
str. CCMP1986 RepID=DEF_PROMP
Length = 201
Score = 97.1 bits (240), Expect = 8e-19
Identities = 48/132 (36%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
Frame = +1
Query: 166 AEVKRVSRKDDKVASATDVQFETP-LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDV 342
+++ R S+ + + + Q TP L+I + D +LR KRI D +++NL M
Sbjct: 6 SQLARKSKTNSPIEKVSKEQTGTPSLEIYKLGDDVLRENAKRISKVDNSIRNLAKDMLQS 65
Query: 343 MYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFP 522
MY GIGL+APQ+G+ +L+V + E + ++L+NP+I Y L ++EGCLS P
Sbjct: 66 MYAAKGIGLAAPQIGIKKELLVIDVNFEDAAAEPLILINPEITDYGTTLNSYEEGCLSIP 125
Query: 523 GIYAEVVRPQSV 558
G+Y VVRP ++
Sbjct: 126 GVYLNVVRPSTI 137
[30][TOP]
>UniRef100_A0Z0D3 Peptide deformylase (Fragment) n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0Z0D3_9CYAN
Length = 143
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/108 (42%), Positives = 66/108 (61%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
P +I D +LR KRI D++ + L+ M MY DGIGL+APQVG+ QL+V +
Sbjct: 16 PFQIHYLGDRVLRQSAKRISRVDDDTRRLIREMLQTMYSADGIGLAAPQVGVQKQLIVID 75
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ ++L+NP IKK S ++ PF EGCLS PG+Y +V RP+ +
Sbjct: 76 CEPDNAATPPLILINPTIKKSSQEISPFQEGCLSIPGVYMDVTRPEVI 123
[31][TOP]
>UniRef100_B9YLW1 Peptide deformylase n=1 Tax='Nostoc azollae' 0708
RepID=B9YLW1_ANAAZ
Length = 187
Score = 95.9 bits (237), Expect = 2e-18
Identities = 49/108 (45%), Positives = 67/108 (62%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL++ D +LR KR+ D+ L+ LV M MY DGIGL+APQVG+N QL+V +
Sbjct: 16 PLRLHYLGDRVLRQPAKRVTKIDDELRQLVREMLQTMYSEDGIGLAAPQVGINKQLIVID 75
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ E +VL+NP IK+ S +L +EGCLS P +Y +V RPQ V
Sbjct: 76 CEPDKPEAPALVLINPVIKQVSSELCVAEEGCLSIPKVYLDVKRPQVV 123
[32][TOP]
>UniRef100_UPI0001BB4A21 peptide deformylase n=1 Tax=alpha proteobacterium HIMB114
RepID=UPI0001BB4A21
Length = 171
Score = 95.5 bits (236), Expect = 2e-18
Identities = 48/104 (46%), Positives = 70/104 (67%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L+I++ PDPILR K+ + D +++ L+D M + MY+ GIGL+APQVG+ +++V +
Sbjct: 4 LEILKEPDPILRKKSDEVSKVDNDIRALMDNMLETMYQAPGIGLAAPQVGILKKVIVIDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRP 549
A E K + + NPKI SD+L +EGCLS PG +AEVVRP
Sbjct: 64 AKEDEPKKPLFIANPKIIWKSDELSSREEGCLSIPGYFAEVVRP 107
[33][TOP]
>UniRef100_Q7RNS7 Polypeptide deformylase, putative n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RNS7_PLAYO
Length = 236
Score = 95.5 bits (236), Expect = 2e-18
Identities = 54/111 (48%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Frame = +1
Query: 229 ETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMV 408
E LKIV YP+ ILR K++ + FD+NLKNL+ MF MY+ GIGLSAPQV ++ +++V
Sbjct: 57 ENDLKIVIYPNSILRQKSEEVIYFDDNLKNLIRRMFKAMYENKGIGLSAPQVNISKRIIV 116
Query: 409 FNPAGEPGEGK-EIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+N E + K E V +NP I + S EGCLSFP I A+V RP V
Sbjct: 117 WNALYEKRDEKNERVFINPLIVQESAVKNKLIEGCLSFPNIEAKVERPAIV 167
[34][TOP]
>UniRef100_C1TMG4 Peptide deformylase n=1 Tax=Dethiosulfovibrio peptidovorans DSM
11002 RepID=C1TMG4_9BACT
Length = 164
Score = 95.1 bits (235), Expect = 3e-18
Identities = 49/102 (48%), Positives = 68/102 (66%)
Frame = +1
Query: 253 YPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPG 432
YPDP+LR K I+ FD+N K+ ++ M +MY+ DG+GL+APQVG ++++ V
Sbjct: 9 YPDPVLREPTKEIERFDDNFKSFLEEMESLMYEYDGVGLAAPQVGESLKVAVI-----AY 63
Query: 433 EGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
EGK VL+NP+I Y + V EGCLSFPGI+ +V RP SV
Sbjct: 64 EGKLHVLINPRIVDYDGRQVD-QEGCLSFPGIFEDVARPASV 104
[35][TOP]
>UniRef100_Q8DIB4 Peptide deformylase n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=DEF_THEEB
Length = 188
Score = 95.1 bits (235), Expect = 3e-18
Identities = 45/108 (41%), Positives = 69/108 (63%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL++ D +LR KR+ D++++++ M MY DGIGL+APQVG+N Q++V +
Sbjct: 16 PLQLHYLGDRVLRQPAKRVSKVDDSIRDIARKMLQTMYSADGIGLAAPQVGINKQILVID 75
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ E + +V++NP IK +S++L EGCLS PG+Y EV RP V
Sbjct: 76 IHPDDPEAEPLVMINPVIKDFSEELEVCQEGCLSIPGVYLEVRRPAMV 123
[36][TOP]
>UniRef100_Q31DB4 Peptide deformylase n=1 Tax=Prochlorococcus marinus str. MIT 9312
RepID=DEF_PROM9
Length = 201
Score = 95.1 bits (235), Expect = 3e-18
Identities = 44/107 (41%), Positives = 67/107 (62%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L+I + D +LR +KRI DE+++ L M MY GIGL+APQ+G+N +L+V +
Sbjct: 31 LEIYKLGDDVLRQNSKRITKVDESIRKLTREMIQSMYAAKGIGLAAPQIGINKELLVIDV 90
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E + ++L+NP+I Y L ++EGCLS PG+Y VVRP ++
Sbjct: 91 NFEDSAAEPLILINPEITDYGTTLNSYEEGCLSIPGVYLNVVRPSTI 137
[37][TOP]
>UniRef100_Q0VTE1 Peptide deformylase n=1 Tax=Alcanivorax borkumensis SK2
RepID=DEF_ALCBS
Length = 168
Score = 95.1 bits (235), Expect = 3e-18
Identities = 45/107 (42%), Positives = 71/107 (66%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L+I+E+PDP LR K ++ D+ L+ L+D MF+ MY GIGL+A QV +++QL+V +
Sbjct: 4 LEILEFPDPRLRTVAKPVEKVDDELRKLIDDMFETMYAAPGIGLAATQVDVHIQLIVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + K +V +NP+I +++ P++EGCLS PG Y +V RP V
Sbjct: 64 SED--HNKPMVFINPQITPLTEEQAPYEEGCLSVPGFYEKVTRPARV 108
[38][TOP]
>UniRef100_A8TUC7 Peptide deformylase n=1 Tax=alpha proteobacterium BAL199
RepID=A8TUC7_9PROT
Length = 175
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/107 (42%), Positives = 70/107 (65%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+ PDP+L+ K + +D+ D+ ++ L+D MF MY G+GL+APQVG+ +++V +
Sbjct: 4 LPIIWAPDPVLKTKCRSVDVVDDEVRRLIDDMFQTMYFAPGVGLAAPQVGVTKRVIVVDV 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
AG+ + + I LVNP+I SD ++EGCLS P +YA+V R V
Sbjct: 64 AGKDEKPQPIALVNPEIVWRSDATQIYEEGCLSLPELYADVERASHV 110
[39][TOP]
>UniRef100_B7KF37 Peptide deformylase n=1 Tax=Cyanothece sp. PCC 7424
RepID=B7KF37_CYAP7
Length = 187
Score = 94.4 bits (233), Expect = 5e-18
Identities = 50/113 (44%), Positives = 71/113 (62%), Gaps = 5/113 (4%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVF- 411
PL+I D +LR KRI DE+++ L M MY ++GIGL+APQV +N QL+V
Sbjct: 16 PLEIHYLGDRVLRQPAKRIAKVDESVRQLAKEMLQTMYSSNGIGLAAPQVAVNKQLLVID 75
Query: 412 ----NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
NPA P ++L+NP+I + S +L F+EGCLS PG+Y +VVRP+ +
Sbjct: 76 CEPDNPANPP-----LILINPQITQSSQELCQFEEGCLSIPGVYLDVVRPKVI 123
[40][TOP]
>UniRef100_B4B2P8 Peptide deformylase n=1 Tax=Cyanothece sp. PCC 7822
RepID=B4B2P8_9CHRO
Length = 187
Score = 94.0 bits (232), Expect = 7e-18
Identities = 46/108 (42%), Positives = 68/108 (62%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL+I D +LR KRI D+ ++ L M MY +GIGL+APQV +N QL+V +
Sbjct: 16 PLEIHYLGDRVLRQPAKRIAKVDDAVRQLAKEMLQTMYSANGIGLAAPQVAVNKQLLVVD 75
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + I+L+NP+I +S L F+EGCLS PG+Y +VVRP+++
Sbjct: 76 CEPDNATNQPIILINPQITHFSRDLCQFEEGCLSIPGVYLDVVRPKAI 123
[41][TOP]
>UniRef100_A3PAC7 Peptide deformylase n=1 Tax=Prochlorococcus marinus str. MIT 9301
RepID=A3PAC7_PROM0
Length = 201
Score = 93.6 bits (231), Expect = 9e-18
Identities = 47/131 (35%), Positives = 76/131 (58%), Gaps = 4/131 (3%)
Frame = +1
Query: 178 RVSRKDDKVASATDVQFETP----LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVM 345
++++K +A + E P L I + D +LR +KRI DE+++ L M M
Sbjct: 7 QLAKKSRTNGNAEKIAKEQPGKPSLDIYKLGDDVLRQNSKRITKVDESIRKLAREMLQSM 66
Query: 346 YKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPG 525
Y GIGL+APQ+G+N +L+V + E + ++L+NP+I + L ++EGCLS PG
Sbjct: 67 YAAKGIGLAAPQIGINKELLVIDVNFEDSAAEPLILINPEITDFGTTLNSYEEGCLSIPG 126
Query: 526 IYAEVVRPQSV 558
+Y VVRP ++
Sbjct: 127 VYLNVVRPSTI 137
[42][TOP]
>UniRef100_Q1EM42 Peptide deformylase n=1 Tax=uncultured Thermotogales bacterium
RepID=Q1EM42_9BACT
Length = 166
Score = 93.6 bits (231), Expect = 9e-18
Identities = 43/107 (40%), Positives = 74/107 (69%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+K++ +PILR ++ +++FD++L+ V + MY DG+GL+APQV ++ ++ V+
Sbjct: 4 MKVIHIGNPILRNVSESVEVFDDDLRAFVKELSKTMYVEDGVGLAAPQVAVSRRIFVY-- 61
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+PG+G +V +NP+I SD++V +EGCLS PGIYA++ RP +V
Sbjct: 62 --DPGDGLRVV-INPEILSKSDEIVKMEEGCLSIPGIYADIDRPSAV 105
[43][TOP]
>UniRef100_C5CG18 Peptide deformylase n=1 Tax=Kosmotoga olearia TBF 19.5.1
RepID=C5CG18_KOSOT
Length = 164
Score = 93.2 bits (230), Expect = 1e-17
Identities = 47/107 (43%), Positives = 70/107 (65%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+ IV +P+LR K++ I FD+NLK V + +MYK DG+GL+APQV + ++ VF+
Sbjct: 1 MHIVYIGNPVLREKSEAIKKFDDNLKTFVKELTSIMYKEDGVGLAAPQVAVLKRMFVFDD 60
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
P V++NP+I + S +LV +EGCLS PG+YA+V RP+ V
Sbjct: 61 GSGPK-----VIINPEILEKSKELVIMEEGCLSIPGVYADVERPEWV 102
[44][TOP]
>UniRef100_B0C0E5 Peptide deformylase n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0C0E5_ACAM1
Length = 189
Score = 93.2 bits (230), Expect = 1e-17
Identities = 46/108 (42%), Positives = 64/108 (59%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL I D +LR KR+ D+ ++ L M MY DGIGL+APQV + QL+V +
Sbjct: 16 PLNIHTLGDRVLRQSAKRVSKVDDEIRELARQMLQTMYSADGIGLAAPQVAVGKQLIVVD 75
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E + I+L+NPKI+++SD L EGCLS PG+Y +V RP +
Sbjct: 76 TDPEEPANQPIILLNPKIRRHSDDLALGQEGCLSIPGVYLDVRRPAQI 123
[45][TOP]
>UniRef100_B3L389 Formylmethionine deformylase, putative n=1 Tax=Plasmodium knowlesi
strain H RepID=B3L389_PLAKH
Length = 242
Score = 93.2 bits (230), Expect = 1e-17
Identities = 52/113 (46%), Positives = 75/113 (66%), Gaps = 1/113 (0%)
Frame = +1
Query: 223 QFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQL 402
Q E LKIV YPDP+LR K + FD+NL+ LV +MF+VMY++ G+GL+APQV +++++
Sbjct: 61 QNEKDLKIVLYPDPVLRKKCNEVVNFDDNLRTLVRSMFNVMYESKGMGLAAPQVNISMRI 120
Query: 403 MVFNPAGEPGEGK-EIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+V+N E + + E V +NP I + S EGCLSFP I +V RP+ V
Sbjct: 121 IVWNALYEKKKKENERVFINPSIVEPSLIRSKLVEGCLSFPDIEGKVDRPRVV 173
[46][TOP]
>UniRef100_A2BNK7 Peptide deformylase n=1 Tax=Prochlorococcus marinus str. AS9601
RepID=DEF_PROMS
Length = 201
Score = 93.2 bits (230), Expect = 1e-17
Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Frame = +1
Query: 166 AEVKRVSRKDDKVASATDVQFETP-LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDV 342
+++ + SR + Q P L I + D +LR +KRI DE+++ L M
Sbjct: 6 SQLAKKSRTNGNAEKIAKEQSGKPFLDIYKLGDDVLRQNSKRITKVDESIRKLAREMLQS 65
Query: 343 MYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFP 522
MY GIGL+APQ+G+N +L+V + E + ++L+NP+I + L ++EGCLS P
Sbjct: 66 MYAAKGIGLAAPQIGINKELLVIDVNFEDSAAEPLILINPEITDFGTTLNSYEEGCLSIP 125
Query: 523 GIYAEVVRPQSV 558
G+Y VVRP ++
Sbjct: 126 GVYLNVVRPSTI 137
[47][TOP]
>UniRef100_B4VHG2 Peptide deformylase n=1 Tax=Microcoleus chthonoplastes PCC 7420
RepID=B4VHG2_9CYAN
Length = 190
Score = 92.8 bits (229), Expect = 2e-17
Identities = 49/138 (35%), Positives = 74/138 (53%)
Frame = +1
Query: 145 PLTSSVRAEVKRVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLV 324
P+T+ V E K++ PL+I D +LR KR+ D++++ L
Sbjct: 2 PMTAQVIVEKKKLDNP--------------PLEIHYLGDRVLRQPAKRVAKVDQSIRQLA 47
Query: 325 DAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDE 504
M MY DGIGL+APQVG+N Q++V + + E ++L+NP IK++ + E
Sbjct: 48 HQMLQTMYSADGIGLAAPQVGVNKQIIVIDCEPDNPENPPLILINPTIKRFGQSICDAQE 107
Query: 505 GCLSFPGIYAEVVRPQSV 558
GCLS PG+Y +V RP V
Sbjct: 108 GCLSVPGVYLDVKRPVEV 125
[48][TOP]
>UniRef100_Q7UHZ5 Peptide deformylase n=1 Tax=Rhodopirellula baltica RepID=DEF_RHOBA
Length = 201
Score = 92.8 bits (229), Expect = 2e-17
Identities = 46/108 (42%), Positives = 69/108 (63%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL I+ +P P LR ++ I D LK++ D M D+MY+ DG+GL+A QV L +++ V N
Sbjct: 2 PLSIIHFPHPTLRHVSRPIVRVDAKLKSMADEMLDLMYEFDGVGLAANQVDLPIRMFVAN 61
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
P G+ EG+ V++NP+I + EGCLS PG+Y +V RP++V
Sbjct: 62 PTGKRDEGESWVILNPEIDRPKGNDTA-QEGCLSVPGLYGQVKRPKTV 108
[49][TOP]
>UniRef100_Q0ASK2 Peptide deformylase n=1 Tax=Maricaulis maris MCS10 RepID=DEF_MARMM
Length = 174
Score = 92.8 bits (229), Expect = 2e-17
Identities = 45/106 (42%), Positives = 67/106 (63%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
+I+ PDPIL+ ++ +D D++L+ L+D M MY DGIGL+A QVG+ +++V + A
Sbjct: 5 EILTVPDPILKEVSQPVDQVDDDLRELMDDMLQTMYAADGIGLAAIQVGVPKRVIVMDLA 64
Query: 421 GEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
G E K VNP + SD L P++EGCLS P +Y E+ RP +
Sbjct: 65 GSDEEAKPRYFVNPVLSDPSDTLKPYEEGCLSVPTVYDEIERPDRI 110
[50][TOP]
>UniRef100_UPI00016C38FB peptide deformylase n=1 Tax=Gemmata obscuriglobus UQM 2246
RepID=UPI00016C38FB
Length = 184
Score = 92.4 bits (228), Expect = 2e-17
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+KIV YP P LRAK K + D +++ M ++MY+++G+GL+APQV L+ Q++V NP
Sbjct: 1 MKIVRYPHPALRAKAKPVIAIDADVQKAAAQMVELMYRSEGLGLAAPQVTLDYQMIVLNP 60
Query: 418 AGEPGE-GKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
GE + +E+V +NP I + + EGCLSFPG+Y V R ++V
Sbjct: 61 LGEADQPDQEVVAINPVIVEAKGSTINDREGCLSFPGLYQNVRRYKTV 108
[51][TOP]
>UniRef100_Q31NJ9 Peptide deformylase n=2 Tax=Synechococcus elongatus
RepID=Q31NJ9_SYNE7
Length = 192
Score = 92.4 bits (228), Expect = 2e-17
Identities = 46/108 (42%), Positives = 65/108 (60%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL + D +LR KR+ D+ L+ + M MY DGIGL+APQVG+N QL+V +
Sbjct: 18 PLDLHYLGDRVLRQPAKRVSRIDDELRQTIRQMLQTMYSADGIGLAAPQVGINKQLIVID 77
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E + +VL+NPKI++ + L EGCLS PG+Y +V RP+ V
Sbjct: 78 LELEDEQAPPLVLINPKIERTAGDLEQCQEGCLSIPGVYLDVERPEIV 125
[52][TOP]
>UniRef100_Q2JXX2 Peptide deformylase n=1 Tax=Synechococcus sp. JA-3-3Ab
RepID=Q2JXX2_SYNJA
Length = 198
Score = 92.4 bits (228), Expect = 2e-17
Identities = 45/108 (41%), Positives = 68/108 (62%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL+I D +LR KR+ ++ ++ L M MY DGIGL+APQVG+ +L+V +
Sbjct: 16 PLRIHRMGDKVLRQPAKRVSQVNDEIRQLARHMLQTMYSADGIGLAAPQVGIPKRLIVVD 75
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ E +VL+NP+I++Y ++V EGCLS PG++ EV+RPQ V
Sbjct: 76 LYPDKPEVPPLVLINPEIREYLGEVVAGQEGCLSIPGVFCEVMRPQGV 123
[53][TOP]
>UniRef100_A5GNQ2 Peptide deformylase n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GNQ2_SYNPW
Length = 201
Score = 92.4 bits (228), Expect = 2e-17
Identities = 52/131 (39%), Positives = 75/131 (57%), Gaps = 4/131 (3%)
Frame = +1
Query: 178 RVSRKDDKVASATDVQFE----TPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVM 345
+++R +K S V E PL+I D +LR +RI DE +++L M M
Sbjct: 7 QLARSAEKAGSPVAVPKEPLDTAPLQIHTLGDDVLRLDARRIGKVDETVRDLARDMLRSM 66
Query: 346 YKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPG 525
Y GIGL+APQVG++ QL+V + E +VL+NP+I S L ++EGCLS PG
Sbjct: 67 YTARGIGLAAPQVGVHQQLLVIDLDPETASSPPLVLINPEITSASASLETYEEGCLSIPG 126
Query: 526 IYAEVVRPQSV 558
+Y +VVRP +V
Sbjct: 127 VYLDVVRPSAV 137
[54][TOP]
>UniRef100_A4XNB3 Peptide deformylase n=1 Tax=Pseudomonas mendocina ymp
RepID=DEF_PSEMY
Length = 168
Score = 92.4 bits (228), Expect = 2e-17
Identities = 44/107 (41%), Positives = 70/107 (65%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR K +D+ D++++ LVD MF+ MY GIGL+A QV ++ +++V +
Sbjct: 4 LNILEFPDPRLRTIAKPVDVVDDSIRQLVDDMFETMYDAPGIGLAATQVNVHKRVVVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E + V +NP+ + +D++ + EGCLS PG Y V RPQ V
Sbjct: 64 SEDKSEPR--VFINPEFESLTDEMDQYQEGCLSVPGFYENVDRPQKV 108
[55][TOP]
>UniRef100_Q05W63 Peptide deformylase n=1 Tax=Synechococcus sp. RS9916
RepID=Q05W63_9SYNE
Length = 201
Score = 92.0 bits (227), Expect = 3e-17
Identities = 49/128 (38%), Positives = 74/128 (57%)
Frame = +1
Query: 175 KRVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKT 354
+ R VA A + +PL I + D +LR + +RI DE+++ L M MY
Sbjct: 10 RSAERSSSSVAVAKEALDVSPLDIHKLGDEVLRQEARRISKVDESVRELARDMLRSMYTA 69
Query: 355 DGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYA 534
GIGL+APQVG++ QL+V + E +VL+NP+I S + ++EGCLS PG+Y
Sbjct: 70 KGIGLAAPQVGVHKQLLVIDLDLETPSSPPLVLINPEITTASATVDTYEEGCLSIPGVYL 129
Query: 535 EVVRPQSV 558
+VVRP ++
Sbjct: 130 DVVRPTAI 137
[56][TOP]
>UniRef100_C8WBD7 Peptide deformylase n=1 Tax=Zymomonas mobilis subsp. mobilis NCIMB
11163 RepID=C8WBD7_ZYMMO
Length = 177
Score = 92.0 bits (227), Expect = 3e-17
Identities = 49/111 (44%), Positives = 72/111 (64%), Gaps = 4/111 (3%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN- 414
L I+E PDP LR K+ +++FD+NL+ L+D MF+ MYK GIGL+A QVG+ +L+V +
Sbjct: 4 LPILEVPDPRLREKSTVVEVFDDNLQRLIDDMFETMYKAPGIGLAAIQVGVAKRLLVIDL 63
Query: 415 -PAGEPGEGKE--IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E GE K +V +NP++ ++ ++EGCLS P YAEV RP +
Sbjct: 64 QQPEEDGEAKRNPMVFINPELTPEGEEKRLYNEGCLSVPDQYAEVRRPSVI 114
[57][TOP]
>UniRef100_Q9REQ2 Peptide deformylase n=2 Tax=Zymomonas mobilis RepID=DEF_ZYMMO
Length = 177
Score = 92.0 bits (227), Expect = 3e-17
Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 5/112 (4%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E PDP LR K+ +++FD+NL+ L+D MF+ MYK GIGL+A QVG+ +L+V +
Sbjct: 4 LPILEVPDPRLREKSTVVEVFDDNLQRLIDDMFETMYKAPGIGLAAIQVGVAKRLLVID- 62
Query: 418 AGEPGEGKE-----IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+P EG E +V +NP++ ++ ++EGCLS P YAEV RP +
Sbjct: 63 LQQPEEGGEAKRNPMVFINPELTPEGEEKRLYNEGCLSVPDQYAEVRRPSVI 114
[58][TOP]
>UniRef100_A4VFH8 Peptide deformylase n=1 Tax=Pseudomonas stutzeri A1501
RepID=DEF_PSEU5
Length = 168
Score = 92.0 bits (227), Expect = 3e-17
Identities = 44/107 (41%), Positives = 70/107 (65%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR K +D+ D+ ++ LVD MF+ MY+ GIGL+A QV ++ +++V +
Sbjct: 4 LNILEFPDPRLRTIAKPVDVVDDGIRQLVDDMFETMYEAPGIGLAATQVNVHKRVVVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E + V +NP+ + +D++ + EGCLS PG Y V RPQ V
Sbjct: 64 SEDRSEPR--VFINPEFEPLTDQMDQYQEGCLSVPGFYENVDRPQKV 108
[59][TOP]
>UniRef100_C1DFV8 Peptide deformylase n=1 Tax=Azotobacter vinelandii DJ
RepID=DEF_AZOVD
Length = 168
Score = 92.0 bits (227), Expect = 3e-17
Identities = 45/107 (42%), Positives = 69/107 (64%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR K I+ D+ ++ L+D MF+ MY GIGL+A QV ++ +L+V +
Sbjct: 4 LTILEFPDPRLRTIAKPIETVDDGIRRLIDDMFETMYAAPGIGLAATQVNVHKRLVVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E + V +NP+ + +++L P+ EGCLS PG Y V RPQ V
Sbjct: 64 SEDKNEPR--VFINPEFEALTEELEPYQEGCLSVPGFYENVDRPQKV 108
[60][TOP]
>UniRef100_C7QRR6 Peptide deformylase n=2 Tax=Cyanothece RepID=C7QRR6_CYAP0
Length = 187
Score = 91.7 bits (226), Expect = 3e-17
Identities = 44/108 (40%), Positives = 69/108 (63%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL+I D +LR KRI D+ ++ L M MY ++GIGL+APQVG++ QL+V +
Sbjct: 16 PLEIHFLGDRVLRQPAKRIAKVDDTIRQLAKEMLQTMYSSNGIGLAAPQVGVHKQLIVVD 75
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ I+L+NP+I ++S +L +EGCLS PG+Y +V RP+++
Sbjct: 76 CDPNDPANQPIILINPQITRFSQELCVVEEGCLSIPGVYLDVTRPKAI 123
[61][TOP]
>UniRef100_B4X127 Peptide deformylase n=1 Tax=Alcanivorax sp. DG881
RepID=B4X127_9GAMM
Length = 168
Score = 91.7 bits (226), Expect = 3e-17
Identities = 46/107 (42%), Positives = 69/107 (64%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L+I+E+PDP LR K ++ D+ L+ L+D M + MY GIGL+A QV ++ +L+V +
Sbjct: 4 LEILEFPDPRLRTVAKPVEKVDDELRKLIDDMIETMYDASGIGLAATQVNVHQRLLVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ E E K V +NP+I +D+L P++EGCLS PG Y +V R V
Sbjct: 64 SEERNEPK--VYINPQITPLTDELAPYEEGCLSVPGFYEKVKRAARV 108
[62][TOP]
>UniRef100_Q3MEY2 Peptide deformylase n=1 Tax=Anabaena variabilis ATCC 29413
RepID=Q3MEY2_ANAVT
Length = 187
Score = 91.3 bits (225), Expect = 5e-17
Identities = 50/113 (44%), Positives = 67/113 (59%), Gaps = 5/113 (4%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVF- 411
PL++ D +LR KRI D+ + L+ M MY DGIGL+APQVG+N QL+V
Sbjct: 16 PLQLHYLGDRVLRQPAKRITKVDDETRQLIRDMLQTMYSNDGIGLAAPQVGINKQLIVID 75
Query: 412 ----NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
NPA P +VL+NP IK+ S ++ EGCLS PG+Y +V RP+ V
Sbjct: 76 CEPDNPANPP-----LVLINPTIKQVSREICSAQEGCLSIPGVYMDVKRPEVV 123
[63][TOP]
>UniRef100_Q117U9 Peptide deformylase n=1 Tax=Trichodesmium erythraeum IMS101
RepID=Q117U9_TRIEI
Length = 187
Score = 91.3 bits (225), Expect = 5e-17
Identities = 46/109 (42%), Positives = 64/109 (58%)
Frame = +1
Query: 232 TPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVF 411
+PL+I D LR KR+ D +++ LV M MY DGIGL+APQV + Q++V
Sbjct: 15 SPLEIYYLGDRSLRQSAKRVAKVDSDMRKLVREMLQTMYTADGIGLAAPQVNVQKQVIVI 74
Query: 412 NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ +VL+NP IKKYS+ + F EGCLS PG+Y +V RP +
Sbjct: 75 DCEPTNSATPPLVLINPTIKKYSNDICLFQEGCLSIPGVYLDVQRPSEI 123
[64][TOP]
>UniRef100_A5K6E9 Formylmethionine deformylase, putative n=1 Tax=Plasmodium vivax
RepID=A5K6E9_PLAVI
Length = 186
Score = 91.3 bits (225), Expect = 5e-17
Identities = 52/113 (46%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Frame = +1
Query: 223 QFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQL 402
Q E LKIV YPDP+LR K + FD+NL+ LV +MF+VMY++ G+GL+APQV ++ ++
Sbjct: 5 QNEKDLKIVLYPDPVLRKKCDEVVHFDDNLRTLVRSMFNVMYESKGMGLAAPQVNISRRI 64
Query: 403 MVFNPAGEPGEGK-EIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+V+N E + + E V +NP I + S EGCLSFP I +V RP V
Sbjct: 65 IVWNALYEKKKKENERVFINPSIVEPSLVRSKLVEGCLSFPDIEGKVDRPSVV 117
[65][TOP]
>UniRef100_A2BU25 Peptide deformylase n=1 Tax=Prochlorococcus marinus str. MIT 9515
RepID=DEF_PROM5
Length = 203
Score = 91.3 bits (225), Expect = 5e-17
Identities = 47/131 (35%), Positives = 78/131 (59%), Gaps = 4/131 (3%)
Frame = +1
Query: 178 RVSRKDDKVASATDVQFET----PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVM 345
++++K S++ V+ E PL+I + + +LR KRI D + +NL M M
Sbjct: 7 QLAKKSRNELSSSKVKKEVIENPPLEIFKLGNDVLRTNAKRIGKVDLDTRNLAKDMLKSM 66
Query: 346 YKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPG 525
Y GIGL+APQVG++ +L+V + E + ++L+NP+I + + L ++EGCLS PG
Sbjct: 67 YSAKGIGLAAPQVGISKELLVIDINFEDSAAEPLILINPEITAFGNTLNSYEEGCLSIPG 126
Query: 526 IYAEVVRPQSV 558
+Y VVRP ++
Sbjct: 127 VYLNVVRPSTI 137
[66][TOP]
>UniRef100_Q8YSK6 Peptide deformylase 1 n=1 Tax=Nostoc sp. PCC 7120 RepID=DEF1_ANASP
Length = 187
Score = 91.3 bits (225), Expect = 5e-17
Identities = 49/113 (43%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVF- 411
PL++ D +LR KRI D+ + L+ M MY +DGIGL+APQVG+N QL+V
Sbjct: 16 PLQLHYLGDRVLRQPAKRITKVDDETRQLIRDMLQTMYSSDGIGLAAPQVGINKQLIVID 75
Query: 412 ----NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
NPA P ++L+NP IK+ S ++ EGCLS PG+Y +V RP+ V
Sbjct: 76 CEPDNPANPP-----LILINPTIKQVSREICSAQEGCLSIPGVYMDVKRPEVV 123
[67][TOP]
>UniRef100_UPI0001AF4CFF peptide deformylase n=1 Tax=Pseudomonas syringae pv. oryzae str.
1_6 RepID=UPI0001AF4CFF
Length = 168
Score = 90.5 bits (223), Expect = 8e-17
Identities = 45/107 (42%), Positives = 70/107 (65%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PD LR K + + DE ++ LVD MF+ MY+ GIGL+A QV ++ +++V +
Sbjct: 4 LNILEFPDSRLRTLAKPVAMVDEGIRQLVDDMFETMYEAPGIGLAATQVNVHKRVVVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E +V +NP+I+K +D++ + EGCLS PG Y V RPQ V
Sbjct: 64 SEDRSE--PMVFINPEIEKLTDEMDQYQEGCLSVPGFYENVDRPQKV 108
[68][TOP]
>UniRef100_A3IZD1 Peptide deformylase n=1 Tax=Cyanothece sp. CCY0110
RepID=A3IZD1_9CHRO
Length = 187
Score = 90.5 bits (223), Expect = 8e-17
Identities = 44/108 (40%), Positives = 67/108 (62%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL I D LR KRI D++++ L M MY + GIGL+APQV ++ QL+V +
Sbjct: 16 PLDIHVLGDRALRQPAKRITKVDDSIRKLAKEMLQTMYSSHGIGLAAPQVAIHKQLIVID 75
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ E ++L+NPKI + S++L +EGCLS PG+Y +V RP+++
Sbjct: 76 CEPDNPENPPLILINPKITRVSEELCVVEEGCLSIPGVYLDVTRPKTI 123
[69][TOP]
>UniRef100_O66847 Peptide deformylase n=1 Tax=Aquifex aeolicus RepID=DEF_AQUAE
Length = 169
Score = 90.5 bits (223), Expect = 8e-17
Identities = 45/106 (42%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA- 420
IV YP+ IL+ +++D+ D+ +KNL+ MFD MY+ +G+GL+A Q+G+ + +MV + +
Sbjct: 5 IVIYPNEILKKPTEKVDVIDKEVKNLIRDMFDTMYEAEGVGLAANQIGVPLSVMVIDTSP 64
Query: 421 GEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E ++VL+NP+IK+ K + + EGCLSFPG+ EV R Q V
Sbjct: 65 KEDAPPLKLVLINPEIKEGEGK-IKYKEGCLSFPGLSVEVERFQKV 109
[70][TOP]
>UniRef100_Q48QI1 Peptide deformylase n=1 Tax=Pseudomonas syringae pv. phaseolicola
1448A RepID=Q48QI1_PSE14
Length = 168
Score = 90.1 bits (222), Expect = 1e-16
Identities = 45/107 (42%), Positives = 70/107 (65%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PD LR K + + DE ++ LVD MF+ MY+ GIGL+A QV ++ +++V +
Sbjct: 4 LNILEFPDSRLRTIAKPVAMVDEGIRQLVDDMFETMYEAPGIGLAATQVNVHKRVVVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E +V +NP+I+K +D++ + EGCLS PG Y V RPQ V
Sbjct: 64 SEDRSE--PMVFINPEIEKLTDEMDQYQEGCLSVPGFYENVDRPQKV 108
[71][TOP]
>UniRef100_B9NZE4 Peptide deformylase n=1 Tax=Prochlorococcus marinus str. MIT 9202
RepID=B9NZE4_PROMA
Length = 201
Score = 90.1 bits (222), Expect = 1e-16
Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Frame = +1
Query: 181 VSRKDDKVASATDVQFET----PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMY 348
++RK S T V E PL+I + LR KRI D +++ L M MY
Sbjct: 8 LARKSRNNVSTTKVIKEAIDNPPLEIYKLGSKALRTTAKRISKVDIDIRKLAKEMLQSMY 67
Query: 349 KTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGI 528
GIGL+APQVG++ +L+V + E + ++L+NP+I Y L ++EGCLS PG+
Sbjct: 68 SAKGIGLAAPQVGISKELLVIDINFEDSAAEPLILINPEITAYGSTLNSYEEGCLSIPGV 127
Query: 529 YAEVVRPQSV 558
Y V+RP ++
Sbjct: 128 YLNVIRPSTI 137
[72][TOP]
>UniRef100_B0JU85 Peptide deformylase n=2 Tax=Microcystis aeruginosa
RepID=B0JU85_MICAN
Length = 191
Score = 90.1 bits (222), Expect = 1e-16
Identities = 43/108 (39%), Positives = 69/108 (63%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL++ D +LR KRI D++++ L M MY ++GIGL+APQV +N QL+V +
Sbjct: 16 PLELHYLGDRVLRQPAKRIAKVDDSIRQLAREMLQTMYSSNGIGLAAPQVAVNKQLIVID 75
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ E ++L+NP+I YS +L +EGCLS P ++ +V+RPQ++
Sbjct: 76 CEHDKPENPPLILINPQIIGYSRELCKAEEGCLSIPDVFLDVIRPQAI 123
[73][TOP]
>UniRef100_A3ZSQ3 Peptide deformylase n=1 Tax=Blastopirellula marina DSM 3645
RepID=A3ZSQ3_9PLAN
Length = 194
Score = 90.1 bits (222), Expect = 1e-16
Identities = 45/108 (41%), Positives = 68/108 (62%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL++V YP P LR ++K + D +L+ +V MF++MY+ GIGL+A QV L ++L V N
Sbjct: 2 PLEVVHYPHPTLRYQSKPVKRVDADLRKIVAEMFELMYENRGIGLAANQVDLPIRLFVAN 61
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+G GEG+E+V +NP I + +EGCLS P ++ V RP +
Sbjct: 62 LSGTKGEGEELVFINPVISRPKGN-EEEEEGCLSLPQVFGPVKRPAEI 108
[74][TOP]
>UniRef100_Q8UID1 Peptide deformylase n=1 Tax=Agrobacterium tumefaciens str. C58
RepID=DEF_AGRT5
Length = 170
Score = 90.1 bits (222), Expect = 1e-16
Identities = 44/105 (41%), Positives = 66/105 (62%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
++ PDP+LR ++K I+ D + L D M + MY GIGL+A Q+G+ +++V + A
Sbjct: 6 LIILPDPVLRQQSKLIEQVDAEVLRLADDMLETMYDAPGIGLAAIQIGVPRRMLVIDVAR 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E E +V +NP+I K SD + ++EGCLS P YAEV RP S+
Sbjct: 66 EGEEKTPVVFINPEILKVSDDISTYEEGCLSIPDYYAEVERPASL 110
[75][TOP]
>UniRef100_Q2JI68 Peptide deformylase n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13)
RepID=Q2JI68_SYNJB
Length = 196
Score = 89.7 bits (221), Expect = 1e-16
Identities = 43/108 (39%), Positives = 67/108 (62%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL+I D +LR KRI ++ ++ L M MY DGIGL+APQVG+ +++V +
Sbjct: 18 PLRIYRMGDKVLRQPAKRISQVNDEIRQLARDMLQTMYSFDGIGLAAPQVGIPKRMIVVD 77
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ E +VL+NP+I++Y + V EGCLS PG++ EV+RP+ +
Sbjct: 78 LYPDKPEVPPLVLINPEIREYIGEAVAGQEGCLSIPGVFCEVMRPEGI 125
[76][TOP]
>UniRef100_B2J6M0 Peptide deformylase n=1 Tax=Nostoc punctiforme PCC 73102
RepID=B2J6M0_NOSP7
Length = 187
Score = 89.7 bits (221), Expect = 1e-16
Identities = 46/108 (42%), Positives = 65/108 (60%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL++ D +LR KRI D+ L+ +V M MY DGIGL+APQVG++ QL+V +
Sbjct: 16 PLELHYLGDRVLRQAAKRISKVDDELRQMVREMLQTMYSKDGIGLAAPQVGIHKQLIVID 75
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E +VL+NP IK+ S + +EGCLS P +Y +V RP+ V
Sbjct: 76 LEPENAANPPLVLINPTIKQVSRDISVAEEGCLSIPNVYLDVKRPEVV 123
[77][TOP]
>UniRef100_Q6DND6 Peptide deformylase n=1 Tax=Borrelia hermsii RepID=Q6DND6_BORHE
Length = 185
Score = 89.7 bits (221), Expect = 1e-16
Identities = 49/121 (40%), Positives = 75/121 (61%)
Frame = +1
Query: 196 DKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSA 375
DKV S + FE ++IV YPD +LR K K + D+ L+N+ M ++M G+GL+A
Sbjct: 7 DKVHSLSLNFFEGFMEIVFYPDDLLRVKTKAVLNIDDELRNIAFKMVNLMDINKGVGLAA 66
Query: 376 PQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQS 555
PQVGL++ + V E K +V +NP I + S +L + EGCLS PG+Y +++RP+S
Sbjct: 67 PQVGLDLSIFVVR---ENVMSKPLVFINPLITETSFELSVYKEGCLSIPGVYYDLLRPKS 123
Query: 556 V 558
+
Sbjct: 124 I 124
[78][TOP]
>UniRef100_A4CQP5 Peptide deformylase n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CQP5_SYNPV
Length = 183
Score = 89.7 bits (221), Expect = 1e-16
Identities = 47/108 (43%), Positives = 66/108 (61%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL+I D +LR +RI DE +++L M MY GIGL+APQVG++ QL+V +
Sbjct: 12 PLQIHTLGDDVLRLDARRIGKVDETVRDLARDMLRSMYTARGIGLAAPQVGVHQQLLVID 71
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E +VL+NP+I S L ++EGCLS PG+Y +VVRP +V
Sbjct: 72 LDPETASSPPLVLINPEIISASASLDTYEEGCLSIPGVYLDVVRPSAV 119
[79][TOP]
>UniRef100_P73441 Peptide deformylase n=1 Tax=Synechocystis sp. PCC 6803
RepID=DEF_SYNY3
Length = 187
Score = 89.7 bits (221), Expect = 1e-16
Identities = 41/108 (37%), Positives = 69/108 (63%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL++ D +LR KRI D++++ L M MY +GIGL+APQVG+N QL+V +
Sbjct: 16 PLELHYLGDKVLRQPAKRIAKVDDSIRKLAKEMLQTMYSANGIGLAAPQVGINKQLLVVD 75
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + ++++NP+I + S++L +EGCLS P +Y +V RP+++
Sbjct: 76 CEQDKPDEPPLIMINPQITRTSEELCVVEEGCLSVPNVYMDVTRPRAI 123
[80][TOP]
>UniRef100_Q1NFQ9 Peptide deformylase n=1 Tax=Sphingomonas sp. SKA58
RepID=Q1NFQ9_9SPHN
Length = 176
Score = 89.4 bits (220), Expect = 2e-16
Identities = 48/112 (42%), Positives = 68/112 (60%), Gaps = 7/112 (6%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVF---- 411
I+E PDP LR + R+D D++L+ L+D MFD MY GIGL+A QVG+ +++V
Sbjct: 6 ILEAPDPRLRTISTRVDAIDDDLQTLIDDMFDTMYDAPGIGLAAIQVGVPKRVLVIDLQE 65
Query: 412 ---NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ G P +V +NP+I K SD L ++EGCLS P +AEV RP +
Sbjct: 66 PESDEEGAPPVKNPMVFINPEILKGSDDLSVYNEGCLSVPDQFAEVERPSVI 117
[81][TOP]
>UniRef100_P63913 Peptide deformylase n=24 Tax=Brucella RepID=DEF_BRUME
Length = 175
Score = 89.4 bits (220), Expect = 2e-16
Identities = 45/105 (42%), Positives = 64/105 (60%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
++ PDP+LR +K ++ FD+ L+ MFD MY GIGL+A QVG ++++V + A
Sbjct: 6 LIILPDPVLRQVSKPVERFDDQLRKFASDMFDTMYDAPGIGLAAIQVGEPIRMLVIDLAK 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E + VNP I + SDK ++EGCLS P YAEV RP +V
Sbjct: 66 EGEPKAPHIFVNPTIVQSSDKRSTYEEGCLSIPDYYAEVERPATV 110
[82][TOP]
>UniRef100_B8KLT5 Peptide deformylase n=1 Tax=gamma proteobacterium NOR5-3
RepID=B8KLT5_9GAMM
Length = 168
Score = 89.4 bits (220), Expect = 2e-16
Identities = 42/107 (39%), Positives = 67/107 (62%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR K +++ D+ L+ L+D M + MY GIGL+A QV ++ +L+V +
Sbjct: 4 LDILEFPDPRLRTVAKPVEVVDDALRTLIDNMLETMYAASGIGLAATQVNVHQRLLVLDT 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ ++ +NP++ D L +DEGCLS PG Y EV RP+++
Sbjct: 64 S--ENRDSPMIFINPQVTILDDTLGSYDEGCLSVPGFYEEVNRPRTI 108
[83][TOP]
>UniRef100_Q7VED2 Peptide deformylase n=1 Tax=Prochlorococcus marinus RepID=DEF_PROMA
Length = 203
Score = 89.4 bits (220), Expect = 2e-16
Identities = 51/134 (38%), Positives = 77/134 (57%)
Frame = +1
Query: 157 SVRAEVKRVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMF 336
++ AE +R S K TD + L+I + LR KRI D+N+++LV M
Sbjct: 9 AINAEKQRTSLAVSK--KPTD---QPELEIHTLGNSALRQSAKRISKVDKNIRDLVKKML 63
Query: 337 DVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLS 516
MY GIGL+APQ+G QL+V + E I+L+NP+I ++S + ++EGCLS
Sbjct: 64 HSMYAAKGIGLAAPQIGSQQQLLVIDLDIENSATPPIILINPEITEFSATIDTYEEGCLS 123
Query: 517 FPGIYAEVVRPQSV 558
PG+Y +V+RP S+
Sbjct: 124 IPGVYLDVIRPSSI 137
[84][TOP]
>UniRef100_Q500S9 Peptide deformylase n=1 Tax=Pseudomonas syringae pv. syringae B728a
RepID=Q500S9_PSEU2
Length = 168
Score = 89.0 bits (219), Expect = 2e-16
Identities = 44/107 (41%), Positives = 70/107 (65%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PD LR K + + D+ ++ LVD MF+ MY+ GIGL+A QV ++ +++V +
Sbjct: 4 LNILEFPDSRLRTIAKPVAMVDDGIRQLVDDMFETMYEAPGIGLAATQVNVHKRVVVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E +V +NP+I+K +D++ + EGCLS PG Y V RPQ V
Sbjct: 64 SEDRSE--PMVFINPEIEKLTDEMDQYQEGCLSVPGFYENVDRPQKV 108
[85][TOP]
>UniRef100_Q3KKE5 Peptide deformylase n=1 Tax=Pseudomonas fluorescens Pf0-1
RepID=Q3KKE5_PSEPF
Length = 168
Score = 89.0 bits (219), Expect = 2e-16
Identities = 43/107 (40%), Positives = 69/107 (64%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR K + + D+ ++ LVD MF+ MY+ GIGL+A QV ++ +++V +
Sbjct: 4 LNILEFPDPRLRTIAKPVAVVDDEVRQLVDDMFETMYEAPGIGLAATQVNVHKRIVVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E + V +NP+ + +D++ + EGCLS PG Y V RPQ V
Sbjct: 64 SEDRTEPR--VFINPEFESLTDEMEQYQEGCLSVPGFYENVDRPQKV 108
[86][TOP]
>UniRef100_A8G268 Peptide deformylase n=1 Tax=Prochlorococcus marinus str. MIT 9215
RepID=A8G268_PROM2
Length = 201
Score = 89.0 bits (219), Expect = 2e-16
Identities = 48/130 (36%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Frame = +1
Query: 181 VSRKDDKVASATDVQFET----PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMY 348
++RK S T V E PL+I + LR KRI D + + L M MY
Sbjct: 8 LARKSRNNVSTTKVIKEAIDNPPLEIYKLGSKTLRTTAKRISKVDIDTRKLAKEMLQSMY 67
Query: 349 KTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGI 528
GIGL+APQVG++ +L+V + E + ++L+NP+I Y L ++EGCLS PG+
Sbjct: 68 SAKGIGLAAPQVGISKELLVIDINFEDSAAEPLILINPEITAYGSTLNSYEEGCLSIPGV 127
Query: 529 YAEVVRPQSV 558
Y V+RP ++
Sbjct: 128 YLNVIRPSTI 137
[87][TOP]
>UniRef100_A4A934 Peptide deformylase n=1 Tax=Congregibacter litoralis KT71
RepID=A4A934_9GAMM
Length = 168
Score = 89.0 bits (219), Expect = 2e-16
Identities = 44/107 (41%), Positives = 68/107 (63%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR K ++ D++L+ L+D M + MY+ GIGL+A QV ++ +L+V +
Sbjct: 4 LDILEFPDPRLRTVAKPVESVDDDLRALIDNMIETMYEASGIGLAATQVNVHKRLLVLDI 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + +V +NP++ D L +DEGCLS PG Y EV RP+ V
Sbjct: 64 S--ENRDQPMVFINPEVTVLDDTLGSYDEGCLSVPGFYEEVNRPRKV 108
[88][TOP]
>UniRef100_B1WVG6 Peptide deformylase n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WVG6_CYAA5
Length = 187
Score = 88.6 bits (218), Expect = 3e-16
Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVF- 411
PL I D +LR KRI D++++ L M MY + GIGL+APQV ++ QL+V
Sbjct: 16 PLDIHVLGDRVLRQPAKRIAKVDDSVRQLAKEMLQTMYSSHGIGLAAPQVAIHKQLIVID 75
Query: 412 ----NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
NPA P ++L+NPKI + S +L +EGCLS PG+Y +V RP+++
Sbjct: 76 CEPDNPANPP-----LILINPKITRVSQELCVVEEGCLSIPGVYLDVTRPKTI 123
[89][TOP]
>UniRef100_A5IAY2 Peptide deformylase n=4 Tax=Legionella pneumophila
RepID=A5IAY2_LEGPC
Length = 170
Score = 88.6 bits (218), Expect = 3e-16
Identities = 48/107 (44%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
KI+ PD LR K ++ FDE+L+ L++ MFD MY G+GL+APQ+G++++L V +
Sbjct: 5 KILYLPDERLRKIAKPVETFDESLQTLINDMFDTMYDARGVGLAAPQIGVSLRLSVIDIV 64
Query: 421 GEPGEGKEIVLVNPKI-KKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
G+ E +IV+VNP+I + +K F+EGCLS PG Y VVR + V
Sbjct: 65 GDKKE--QIVIVNPEIVSSHGEK--EFEEGCLSVPGAYDTVVRAEKV 107
[90][TOP]
>UniRef100_B5ILE4 Peptide deformylase n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5ILE4_9CHRO
Length = 183
Score = 88.6 bits (218), Expect = 3e-16
Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Frame = +1
Query: 229 ETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMV 408
+ PL+I D +LR +RI DE ++ L M MY GIGL+APQVG++ QL+V
Sbjct: 10 QPPLEIHTLGDAVLRTPARRISKVDEAVRELARDMLRSMYTAKGIGLAAPQVGVHKQLLV 69
Query: 409 F-----NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
NPA P +VL+NP+I+ + L ++EGCLS PG+Y VVRP +V
Sbjct: 70 IDLDPDNPATPP-----MVLINPEIRSFGGSLDTYEEGCLSIPGVYLNVVRPTAV 119
[91][TOP]
>UniRef100_Q7NIF5 Peptide deformylase 2 n=1 Tax=Gloeobacter violaceus
RepID=DEF2_GLOVI
Length = 187
Score = 88.6 bits (218), Expect = 3e-16
Identities = 46/108 (42%), Positives = 65/108 (60%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL I D +LR +K+I ++ ++ L M MY DGIGL+APQVG+N +++V +
Sbjct: 16 PLAIHTLGDRVLRQGSKQISGINDEVRKLAQQMLQTMYSADGIGLAAPQVGVNKRMIVVD 75
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E +VL+NP IK++S L EGCLS P IYA+V RP+ V
Sbjct: 76 IDPENAARPPLVLINPLIKQFSSDLAVDQEGCLSVPSIYADVRRPERV 123
[92][TOP]
>UniRef100_UPI000160BD55 peptide deformylase n=1 Tax=Pseudomonas fluorescens Pf-5
RepID=UPI000160BD55
Length = 168
Score = 88.2 bits (217), Expect = 4e-16
Identities = 43/107 (40%), Positives = 69/107 (64%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR K + + D+ ++ LVD MF+ MY+ GIGL+A QV ++ +++V +
Sbjct: 4 LNILEFPDPRLRTIAKPVAVVDDEVRQLVDDMFETMYEAPGIGLAATQVNVHKRVVVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E + V +NP+ + +D++ + EGCLS PG Y V RPQ V
Sbjct: 64 SEDRSEPR--VFINPEFEALTDEMDQYQEGCLSVPGFYENVDRPQRV 108
[93][TOP]
>UniRef100_Q4KKQ9 Peptide deformylase n=1 Tax=Pseudomonas fluorescens Pf-5
RepID=Q4KKQ9_PSEF5
Length = 213
Score = 88.2 bits (217), Expect = 4e-16
Identities = 43/107 (40%), Positives = 69/107 (64%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR K + + D+ ++ LVD MF+ MY+ GIGL+A QV ++ +++V +
Sbjct: 49 LNILEFPDPRLRTIAKPVAVVDDEVRQLVDDMFETMYEAPGIGLAATQVNVHKRVVVMDL 108
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E + V +NP+ + +D++ + EGCLS PG Y V RPQ V
Sbjct: 109 SEDRSEPR--VFINPEFEALTDEMDQYQEGCLSVPGFYENVDRPQRV 153
[94][TOP]
>UniRef100_Q02V62 Peptide deformylase n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14
RepID=Q02V62_PSEAB
Length = 168
Score = 88.2 bits (217), Expect = 4e-16
Identities = 41/107 (38%), Positives = 70/107 (65%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR K +++ D+ ++ L+D MF+ MY+ GIGL+A QV ++ +++V +
Sbjct: 4 LNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E + V +NP+ + ++++ + EGCLS PG Y V RPQ V
Sbjct: 64 SEDKSEPR--VFINPEFEPLTEEMDQYQEGCLSVPGFYENVDRPQKV 108
[95][TOP]
>UniRef100_A6UX81 Peptide deformylase n=1 Tax=Pseudomonas aeruginosa PA7
RepID=A6UX81_PSEA7
Length = 168
Score = 88.2 bits (217), Expect = 4e-16
Identities = 41/107 (38%), Positives = 70/107 (65%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR K +++ D+ ++ L+D MF+ MY+ GIGL+A QV ++ +++V +
Sbjct: 4 LNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E + V +NP+ + ++++ + EGCLS PG Y V RPQ V
Sbjct: 64 SEDKSEPR--VFINPEFEPLTEEMDQYQEGCLSVPGFYENVDRPQKV 108
[96][TOP]
>UniRef100_C9T2D6 Peptide deformylase n=2 Tax=Brucella ceti RepID=C9T2D6_9RHIZ
Length = 175
Score = 88.2 bits (217), Expect = 4e-16
Identities = 45/105 (42%), Positives = 64/105 (60%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
++ PDP+LR +K ++ FD+ L+ MFD MY GIGL+A QVG ++++V + A
Sbjct: 6 LIILPDPVLRQVSKPVERFDDQLRKFASDMFDTMYDALGIGLAAIQVGEPIRMLVIDLAK 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E + VNP I + SDK ++EGCLS P YAEV RP +V
Sbjct: 66 EGEPKAPHIFVNPTIVQSSDKRSTYEEGCLSIPDYYAEVERPATV 110
[97][TOP]
>UniRef100_C3XBJ7 Peptide deformylase n=1 Tax=Oxalobacter formigenes OXCC13
RepID=C3XBJ7_OXAFO
Length = 208
Score = 88.2 bits (217), Expect = 4e-16
Identities = 44/107 (41%), Positives = 69/107 (64%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+ YPDP L ++ + F ++LK+L+ M MY+ G+GL+APQ+ ++ QL+V +
Sbjct: 33 LPILRYPDPRLLKPSRPVTDFGDSLKSLIADMAQTMYEAPGVGLAAPQINVHKQLIVIDV 92
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E + V +NP+I K S++ F+EGCLS PGIY E+ RP V
Sbjct: 93 SEQKNELR--VFINPQIVKASEEKAIFEEGCLSLPGIYDEIERPAKV 137
[98][TOP]
>UniRef100_P94601 Peptide deformylase n=1 Tax=Fremyella diplosiphon RepID=DEF_FREDI
Length = 187
Score = 88.2 bits (217), Expect = 4e-16
Identities = 49/113 (43%), Positives = 67/113 (59%), Gaps = 5/113 (4%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVF- 411
PL++ D +LR KRI D+ L+ L+ M MY DGIGL+APQVG++ QL+V
Sbjct: 16 PLQLHYLGDRVLRQPAKRIAKVDDELRQLIRDMLQTMYSKDGIGLAAPQVGIHKQLIVID 75
Query: 412 ----NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
NPA P +VL+NP IK+ S ++ EGCLS P +Y +V RP+ V
Sbjct: 76 LEPDNPANPP-----LVLINPTIKQVSKEICVAQEGCLSIPNVYMDVKRPEVV 123
[99][TOP]
>UniRef100_B8HY87 Peptide deformylase n=1 Tax=Cyanothece sp. PCC 7425
RepID=B8HY87_CYAP4
Length = 188
Score = 87.8 bits (216), Expect = 5e-16
Identities = 45/110 (40%), Positives = 64/110 (58%)
Frame = +1
Query: 229 ETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMV 408
E PL I D +LR KRI + + L M MY DGIGL+APQVG+N QL+V
Sbjct: 14 EPPLTIHYLGDRVLRQPCKRISQVNNETRELARTMLQTMYSADGIGLAAPQVGVNKQLIV 73
Query: 409 FNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + ++LVNP I+++S ++ EGCLS PG+Y +V RP+ +
Sbjct: 74 VDIHPDEAANPPLILVNPVIREFSPEVSLGQEGCLSIPGVYLDVKRPEMI 123
[100][TOP]
>UniRef100_A6WYK7 Peptide deformylase n=1 Tax=Ochrobactrum anthropi ATCC 49188
RepID=A6WYK7_OCHA4
Length = 175
Score = 87.8 bits (216), Expect = 5e-16
Identities = 43/105 (40%), Positives = 65/105 (61%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
+V PDP+LR +K ++ FD+ L+ MFD MY GIGL+A QVG ++++V + A
Sbjct: 6 LVILPDPVLRQVSKPVERFDDQLRKFAGDMFDTMYDAPGIGLAAIQVGEPIRMLVIDLAK 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E V +NP+I +D++ ++EGCLS P YAEV RP ++
Sbjct: 66 EDEPKAPHVFINPEIVGVTDEVSTYEEGCLSIPDYYAEVERPAAI 110
[101][TOP]
>UniRef100_B1PZ35 Peptide deformylase n=1 Tax=Pseudomonas putida RepID=B1PZ35_PSEPU
Length = 168
Score = 87.8 bits (216), Expect = 5e-16
Identities = 43/107 (40%), Positives = 69/107 (64%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR K + + D+ ++ LVD MF+ MY+ GIGL+A QV ++ +++V +
Sbjct: 4 LNILEFPDPRLRTIAKPVAVVDDEVRQLVDDMFETMYEAPGIGLAATQVNVHKRIVVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E + V +NP+++ +D + + EGCLS PG Y V RPQ V
Sbjct: 64 SEDRTEPR--VFINPELEPLTDDMGQYQEGCLSVPGFYENVDRPQRV 108
[102][TOP]
>UniRef100_Q88B43 Peptide deformylase 1 n=1 Tax=Pseudomonas syringae pv. tomato
RepID=DEF1_PSESM
Length = 168
Score = 87.8 bits (216), Expect = 5e-16
Identities = 43/107 (40%), Positives = 69/107 (64%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PD LR K + + D+ ++ LVD MF+ MY+ GIGL+A QV ++ +++V +
Sbjct: 4 LNILEFPDSRLRTLAKPVAMVDDGIRQLVDDMFETMYEAPGIGLAATQVNVHKRVVVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + +V +NP+I+K +D++ + EGCLS PG Y V RPQ V
Sbjct: 64 SED--RSAPMVFINPEIEKLTDEMDQYQEGCLSVPGFYENVDRPQKV 108
[103][TOP]
>UniRef100_C3MF24 Peptide deformylase n=1 Tax=Rhizobium sp. NGR234 RepID=C3MF24_RHISN
Length = 174
Score = 87.4 bits (215), Expect = 7e-16
Identities = 42/105 (40%), Positives = 66/105 (62%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
++ PDPILR + ++ D +++ L D M + MY GIGL+A Q+G+ +L+V + +
Sbjct: 6 LIILPDPILRQVSTPVETIDADIRRLADDMLETMYDAPGIGLAAIQIGVPRRLLVLDVSK 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E E +V +NPKI K S++ ++EGCLS P YAEV RP ++
Sbjct: 66 EGEEKTPLVFINPKIVKSSEERSVYEEGCLSIPDYYAEVERPAAI 110
[104][TOP]
>UniRef100_Q1YV07 Peptide deformylase n=1 Tax=gamma proteobacterium HTCC2207
RepID=Q1YV07_9GAMM
Length = 168
Score = 87.4 bits (215), Expect = 7e-16
Identities = 46/107 (42%), Positives = 67/107 (62%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
LKI+E+PDP LR K + DE +K L+ MFD M GIGL+A Q+ ++++++V N
Sbjct: 4 LKILEFPDPRLRTVAKPVAEVDETIKRLIADMFDTMKDAQGIGLAATQIDVHLRVIVMN- 62
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
GE G V +NP+I+ + + P++EGCLS PG Y +V RP V
Sbjct: 63 LGEDDIGPR-VFINPEIEPLDESVDPYEEGCLSVPGFYEKVDRPAHV 108
[105][TOP]
>UniRef100_C7D645 Peptide deformylase n=1 Tax=Thalassiobium sp. R2A62
RepID=C7D645_9RHOB
Length = 173
Score = 87.4 bits (215), Expect = 7e-16
Identities = 49/106 (46%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
I+ +PDP L+ + + FD+ L L D M D MY GIGL+APQ+G+ ++ V +
Sbjct: 6 ILIHPDPRLKKRADEVTEFDDALCVLGDDMLDTMYDAPGIGLAAPQIGVMSRVFVMDCVK 65
Query: 424 EPG-EGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E G E K +VLVNP+I SD++ +DEGCLS P YAEV RP V
Sbjct: 66 EEGEEPKPMVLVNPEITWTSDEMNTYDEGCLSIPEQYAEVDRPAEV 111
[106][TOP]
>UniRef100_Q0I7A5 Peptide deformylase n=1 Tax=Synechococcus sp. CC9311
RepID=DEF_SYNS3
Length = 202
Score = 87.4 bits (215), Expect = 7e-16
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Frame = +1
Query: 166 AEVKRVSRKDDKVASATDVQFET-PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDV 342
A++ R + K + ET PL I D LR +RI DE +++L M
Sbjct: 6 AQLARSAEKSSSSIAVPKEPLETAPLDIHTLGDDALRGDARRIGKVDERVRDLARDMLRS 65
Query: 343 MYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFP 522
MY GIGL+APQVG++ QL+V + E +VL+NP+I S + ++EGCLS P
Sbjct: 66 MYTASGIGLAAPQVGVHQQLLVIDLDFETPSTPPLVLINPEITTCSASVDTYEEGCLSIP 125
Query: 523 GIYAEVVRPQSV 558
G+Y +VVRP ++
Sbjct: 126 GVYLDVVRPTAI 137
[107][TOP]
>UniRef100_Q9I7A8 Peptide deformylase n=4 Tax=Pseudomonas aeruginosa RepID=DEF_PSEAE
Length = 168
Score = 87.4 bits (215), Expect = 7e-16
Identities = 41/107 (38%), Positives = 69/107 (64%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR K +++ D+ ++ L+D MF+ MY+ GIGL+A QV ++ +++V +
Sbjct: 4 LNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E + V +NP+ + ++ + + EGCLS PG Y V RPQ V
Sbjct: 64 SEDKSEPR--VFINPEFEPLTEDMDQYQEGCLSVPGFYENVDRPQKV 108
[108][TOP]
>UniRef100_C6AZ57 Peptide deformylase n=1 Tax=Rhizobium leguminosarum bv. trifolii
WSM1325 RepID=C6AZ57_RHILS
Length = 171
Score = 87.0 bits (214), Expect = 9e-16
Identities = 44/105 (41%), Positives = 66/105 (62%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
++ PDP+LR +K I+ D +L+ L D M + MY GIGL+A Q+G+ +++V + A
Sbjct: 6 LIILPDPVLRQLSKPIERVDSDLQRLADDMLETMYDAPGIGLAAIQIGVPRRMLVIDIAR 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E E + V +NP++ K SD+ ++EGCLS P YAEV RP V
Sbjct: 66 EGEEKQPQVFINPEVVKSSDERSVYEEGCLSIPDYYAEVERPAVV 110
[109][TOP]
>UniRef100_B5ZN17 Peptide deformylase n=1 Tax=Rhizobium leguminosarum bv. trifolii
WSM2304 RepID=B5ZN17_RHILW
Length = 171
Score = 87.0 bits (214), Expect = 9e-16
Identities = 45/105 (42%), Positives = 66/105 (62%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
++ PDPILR +K I+ D +L+ L D M + MY GIGL+A Q+G+ +++V + +
Sbjct: 6 LIILPDPILRQASKPIERVDADLQGLADDMLETMYDAPGIGLAAIQIGVPRRMLVIDVSR 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E E + V +NP+I K SD+ ++EGCLS P YAEV RP V
Sbjct: 66 EGEEKQPQVFINPEIVKSSDERSVYEEGCLSIPDYYAEVERPAVV 110
[110][TOP]
>UniRef100_B2S1Q0 Peptide deformylase n=1 Tax=Borrelia hermsii DAH RepID=B2S1Q0_BORHD
Length = 174
Score = 87.0 bits (214), Expect = 9e-16
Identities = 45/111 (40%), Positives = 70/111 (63%)
Frame = +1
Query: 226 FETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLM 405
FE ++IV YPD +LR K K + D+ L+N+ M ++M G+GL+APQVGL++ +
Sbjct: 6 FEGFMEIVFYPDDLLRVKTKAVLNIDDELRNIAFKMVNLMDINKGVGLAAPQVGLDLSIF 65
Query: 406 VFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
V E K +V +NP I + S +L + EGCLS PG+Y +++RP+S+
Sbjct: 66 VVR---ENVMSKPLVFINPLITETSFELSVYKEGCLSIPGVYYDLLRPKSI 113
[111][TOP]
>UniRef100_A9B9D0 Peptide deformylase n=1 Tax=Prochlorococcus marinus str. MIT 9211
RepID=A9B9D0_PROM4
Length = 201
Score = 87.0 bits (214), Expect = 9e-16
Identities = 45/128 (35%), Positives = 72/128 (56%)
Frame = +1
Query: 175 KRVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKT 354
K + + +A + + + LKI + LR +R+ D +++ L+ M MY
Sbjct: 10 KNAEKGSNSIAVSKEPTEKPSLKIHTLGNLELRQTAQRVSKVDNSIRTLIKKMLHSMYSA 69
Query: 355 DGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYA 534
GIGL+APQVG++ QL+V + E IVL+NP+I +S + ++EGCLS PG+Y
Sbjct: 70 KGIGLAAPQVGIHKQLLVIDLDIENSTTPPIVLINPQITDFSAAIETYEEGCLSIPGVYL 129
Query: 535 EVVRPQSV 558
V+RP S+
Sbjct: 130 NVIRPSSI 137
[112][TOP]
>UniRef100_A1VU46 Peptide deformylase n=1 Tax=Polaromonas naphthalenivorans CJ2
RepID=A1VU46_POLNA
Length = 173
Score = 87.0 bits (214), Expect = 9e-16
Identities = 49/109 (44%), Positives = 66/109 (60%)
Frame = +1
Query: 232 TPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVF 411
TPL I+ YPDP L K + FD L+ L DAMF MY +GIGL+A QV ++ +L+V
Sbjct: 2 TPLTILRYPDPRLHTVAKPVAAFDARLRQLADAMFHTMYAAEGIGLAATQVDVHERLVVI 61
Query: 412 NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + G + +VL+NP+I S + DEGCLS PGIY V R +V
Sbjct: 62 DVS--EGRNQPLVLINPEIVWASAETRIGDEGCLSVPGIYDGVERALAV 108
[113][TOP]
>UniRef100_D0CGB1 Peptide deformylase n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CGB1_9SYNE
Length = 201
Score = 87.0 bits (214), Expect = 9e-16
Identities = 51/132 (38%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Frame = +1
Query: 166 AEVKRVSRKDDKVASATDVQFETP-LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDV 342
AE+ R + K ETP L+I D +LR +RI +E ++ L M
Sbjct: 6 AELARQADKSRDTMLVPKTALETPPLEIHTLGDEVLRQSARRIGKVNEQVRELARDMLRS 65
Query: 343 MYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFP 522
MY GIGL+APQVG++ QL+V + E +VL+NP+I S L ++EGCLS P
Sbjct: 66 MYTAKGIGLAAPQVGIHQQLLVIDLDLENAATPPLVLINPEITAASAGLDTYEEGCLSIP 125
Query: 523 GIYAEVVRPQSV 558
G+Y +VVRP ++
Sbjct: 126 GVYLDVVRPTAI 137
[114][TOP]
>UniRef100_C3X5C2 Peptide deformylase n=1 Tax=Oxalobacter formigenes HOxBLS
RepID=C3X5C2_OXAFO
Length = 183
Score = 87.0 bits (214), Expect = 9e-16
Identities = 46/107 (42%), Positives = 66/107 (61%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+ YPDP L ++ + FD LK LV+ M MY+ G+GL+APQV + Q++V +
Sbjct: 4 LPILRYPDPRLLKPSRPVTSFDSELKTLVENMAQTMYEAPGVGLAAPQVNAHRQVVVIDV 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E V +NP+I K S++ F+EGCLS PGIY E+ RP V
Sbjct: 64 SEKRNELH--VFINPQIIKASEEKTLFEEGCLSLPGIYDEIERPARV 108
[115][TOP]
>UniRef100_A3Z9I9 Peptide deformylase n=1 Tax=Synechococcus sp. RS9917
RepID=A3Z9I9_9SYNE
Length = 201
Score = 87.0 bits (214), Expect = 9e-16
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
Frame = +1
Query: 166 AEVKRVSRKDDKVASATDVQFETP-LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDV 342
A++ R + + + T + P L+I D +LR KRI D +++L M
Sbjct: 6 AQLARTAERSGTAVAVTKEPLDVPPLEIHTLGDRVLRQPAKRISKVDAAVRDLARDMLRS 65
Query: 343 MYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFP 522
MY GIGL+APQVG++ QL+V + E +VL+NP+I S + ++EGCLS P
Sbjct: 66 MYTARGIGLAAPQVGVHKQLLVIDLDIENAAAPPLVLINPEITSASASVDTYEEGCLSIP 125
Query: 523 GIYAEVVRPQSV 558
G+Y +VVRP ++
Sbjct: 126 GVYLDVVRPSAI 137
[116][TOP]
>UniRef100_A3YUW1 Peptide deformylase n=1 Tax=Synechococcus sp. WH 5701
RepID=A3YUW1_9SYNE
Length = 201
Score = 87.0 bits (214), Expect = 9e-16
Identities = 51/134 (38%), Positives = 70/134 (52%)
Frame = +1
Query: 148 LTSSVRAEVKRVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVD 327
+ SS ++ + V V PL I D +LR KRI DE+++ L
Sbjct: 1 MASSFAKMARQAEQSSRTVQVPKQVLDAPPLTIHRLGDQVLRQSAKRISKVDESVRELAR 60
Query: 328 AMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEG 507
M MY GIGL+APQVG++ Q++V + E +VLVNP+I S L ++EG
Sbjct: 61 NMLRSMYSAHGIGLAAPQVGVHKQVLVIDLDPENPATPPMVLVNPEINATSAALNTYEEG 120
Query: 508 CLSFPGIYAEVVRP 549
CLS PG+Y VVRP
Sbjct: 121 CLSIPGVYLSVVRP 134
[117][TOP]
>UniRef100_Q2KD52 Peptide deformylase n=1 Tax=Rhizobium etli CFN 42
RepID=Q2KD52_RHIEC
Length = 171
Score = 86.7 bits (213), Expect = 1e-15
Identities = 44/105 (41%), Positives = 66/105 (62%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
++ PDP+LR +K I+ D +L+ L D M + MY GIGL+A Q+G+ +++V + +
Sbjct: 6 LIILPDPVLRQLSKPIERVDADLQRLADDMLETMYDAPGIGLAAIQIGVPRRMLVIDVSR 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E E + V +NP+I K SD ++EGCLS P YAEV RP +V
Sbjct: 66 EGEEKQPQVFINPEIVKSSDDRSVYEEGCLSIPDYYAEVERPATV 110
[118][TOP]
>UniRef100_B0KF30 Peptide deformylase n=1 Tax=Pseudomonas putida GB-1
RepID=B0KF30_PSEPG
Length = 168
Score = 86.7 bits (213), Expect = 1e-15
Identities = 43/107 (40%), Positives = 68/107 (63%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR K + FD+ L+ L+D MF+ MY+ GIGL+A QV +++Q++V +
Sbjct: 4 LNILEFPDPRLRTIAKPVTEFDDALRQLIDDMFETMYEAPGIGLAATQVNVHLQVVVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E + V +NP +++ + + + EGCLS PG Y V RP V
Sbjct: 64 SEDRSEPR--VFINPTVEELTHDMGQYQEGCLSVPGFYENVDRPLRV 108
[119][TOP]
>UniRef100_Q4C2D5 Peptide deformylase n=1 Tax=Crocosphaera watsonii WH 8501
RepID=Q4C2D5_CROWT
Length = 188
Score = 86.7 bits (213), Expect = 1e-15
Identities = 47/113 (41%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVF- 411
PL I D LR KRI D++++ L M MY + GIGL+APQV + QL+V
Sbjct: 16 PLDIHFLGDRALRQPAKRIAKVDDSIRKLAKEMLQTMYSSQGIGLAAPQVAIQKQLIVVD 75
Query: 412 ----NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
NPA P ++L+NPKI +S +L +EGCLS PG+Y +V RP+++
Sbjct: 76 CEPDNPANSP-----LILINPKITVFSKELCVVEEGCLSIPGVYLDVTRPKAI 123
[120][TOP]
>UniRef100_Q1YHJ0 Peptide deformylase n=1 Tax=Aurantimonas manganoxydans SI85-9A1
RepID=Q1YHJ0_MOBAS
Length = 170
Score = 86.7 bits (213), Expect = 1e-15
Identities = 41/105 (39%), Positives = 64/105 (60%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
++ PDP+LR +K ++ D+ ++ L D M + MY GIGL+A Q+G +++MV + +
Sbjct: 6 LIILPDPVLRQTSKPVETVDDQVRRLADDMLETMYDAPGIGLAAIQIGEPLRMMVIDVSK 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E E + +NP+I SD + ++EGCLS P YAEV RP V
Sbjct: 66 EEEENAPRIFLNPEILTISDAVSVYEEGCLSIPDYYAEVERPAEV 110
[121][TOP]
>UniRef100_A0ZD89 Peptide deformylase n=1 Tax=Nodularia spumigena CCY9414
RepID=A0ZD89_NODSP
Length = 187
Score = 86.7 bits (213), Expect = 1e-15
Identities = 44/108 (40%), Positives = 66/108 (61%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL + D +LR KRI D+ ++ L M MY +DGIGL+APQVG++ QL+V +
Sbjct: 16 PLTLHYLGDRVLRQDAKRIAKVDDEIRQLAREMLQTMYSSDGIGLAAPQVGIHKQLIVID 75
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + +VL+NP IK+ S ++ EGCLS P +Y +V RP++V
Sbjct: 76 CEPDNPDHPPLVLINPTIKQMSKEVCVAQEGCLSIPKVYLDVKRPEAV 123
[122][TOP]
>UniRef100_Q3AHC4 Peptide deformylase n=1 Tax=Synechococcus sp. CC9605
RepID=DEF_SYNSC
Length = 201
Score = 86.7 bits (213), Expect = 1e-15
Identities = 51/132 (38%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Frame = +1
Query: 166 AEVKRVSRKDDKVASATDVQFETP-LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDV 342
AE+ R + K ETP L+I D +LR +RI +E ++ L M
Sbjct: 6 AELARQADKSRDTMLVPKTALETPPLEIHTLGDEVLRQPARRIGKVNEQVRELARDMLRS 65
Query: 343 MYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFP 522
MY GIGL+APQVG++ QL+V + E +VL+NP+I S L ++EGCLS P
Sbjct: 66 MYTAKGIGLAAPQVGIHQQLLVIDLDLENAATPPLVLINPEITAASAGLDTYEEGCLSIP 125
Query: 523 GIYAEVVRPQSV 558
G+Y +VVRP ++
Sbjct: 126 GVYLDVVRPTAI 137
[123][TOP]
>UniRef100_Q46HV9 Peptide deformylase n=1 Tax=Prochlorococcus marinus str. NATL2A
RepID=DEF_PROMT
Length = 202
Score = 86.7 bits (213), Expect = 1e-15
Identities = 45/128 (35%), Positives = 69/128 (53%)
Frame = +1
Query: 175 KRVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKT 354
K +K ++ + + PLK+ + D LR RI D+ ++ L M MY +
Sbjct: 10 KNAEKKKPSISVSKEPVENPPLKVYQLGDEALRTPANRIVKVDDAIRKLAKDMLITMYSS 69
Query: 355 DGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYA 534
GIGL+APQVG+ +L+V + E +V +NP+I S L ++EGCLS PG+Y
Sbjct: 70 KGIGLAAPQVGIQKRLLVIDLKFEDPNSPPMVFINPEIISSSATLDTYEEGCLSIPGVYL 129
Query: 535 EVVRPQSV 558
V+RP S+
Sbjct: 130 NVLRPSSI 137
[124][TOP]
>UniRef100_Q7V5F9 Peptide deformylase 2 n=2 Tax=Prochlorococcus marinus
RepID=DEF2_PROMM
Length = 201
Score = 86.7 bits (213), Expect = 1e-15
Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Frame = +1
Query: 166 AEVKRVSRKDD-KVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDV 342
A++ R + K VA + PL+I + +LR +RI DE++++LV M
Sbjct: 6 AQLARTAEKTKGSVAVPKEPLDHPPLQIHTLGNGVLRQSTRRIGKVDESVRDLVRDMLRS 65
Query: 343 MYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFP 522
MY GIGL+APQVG++ QL+V + E +VL+NP+I S + ++EGCLS P
Sbjct: 66 MYAAKGIGLAAPQVGIHKQLLVLDLDLETPTTPPVVLINPEIISSSATVETYEEGCLSIP 125
Query: 523 GIYAEVVRPQSV 558
G+Y VVRP +
Sbjct: 126 GVYLNVVRPSEI 137
[125][TOP]
>UniRef100_B1J433 Peptide deformylase n=1 Tax=Pseudomonas putida W619
RepID=B1J433_PSEPW
Length = 168
Score = 86.3 bits (212), Expect = 1e-15
Identities = 43/107 (40%), Positives = 67/107 (62%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR K + FD+ L+ L+D MF+ MY+ GIGL+A QV ++ Q++V +
Sbjct: 4 LNILEFPDPRLRTIAKPVTEFDDALRQLIDDMFETMYEAPGIGLAATQVNVHKQIVVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E + V +NP +++ + + + EGCLS PG Y V RP V
Sbjct: 64 SEDRSEPR--VFINPSVEELTHDMGQYQEGCLSVPGFYENVDRPLRV 108
[126][TOP]
>UniRef100_A5FVK2 Peptide deformylase n=1 Tax=Acidiphilium cryptum JF-5
RepID=A5FVK2_ACICJ
Length = 188
Score = 86.3 bits (212), Expect = 1e-15
Identities = 49/121 (40%), Positives = 80/121 (66%), Gaps = 2/121 (1%)
Frame = +1
Query: 202 VASATDVQFETPLKIVEYPDPILRAKNKRIDIFD-ENLKNLVDAMFDVMYKTDGIGLSAP 378
+++ TD+ +I+ PD LR K +R+ D +++ LV MF MY+ GIGL+AP
Sbjct: 4 MSATTDIADAGIPEILIVPDKRLRMKARRVVGADRDDVAELVPRMFAAMYRAPGIGLAAP 63
Query: 379 QVGLNVQLMVFNPAGEPGEGKE-IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQS 555
Q+G++++L+V + A P + K+ +V++NP+I S++LV +EGCLS PG YAEV+RP
Sbjct: 64 QIGVSLRLVVMDLA--PDDQKQPMVMINPEITARSEELVSREEGCLSLPGQYAEVIRPGQ 121
Query: 556 V 558
+
Sbjct: 122 I 122
[127][TOP]
>UniRef100_C8Q1G2 Peptide deformylase n=1 Tax=Enhydrobacter aerosaccus SK60
RepID=C8Q1G2_9GAMM
Length = 176
Score = 86.3 bits (212), Expect = 1e-15
Identities = 44/105 (41%), Positives = 66/105 (62%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
I+ YPDP LR K + FD+ LK L+D MF+ MY GIGL+A QV ++QL+V + +
Sbjct: 6 ILNYPDPRLRTLAKPVTHFDDELKTLIDDMFETMYAAKGIGLAATQVDEHIQLVVMDLSE 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + + V +NP + +D+L ++EGCLS P Y +V RP+ V
Sbjct: 66 DGSQPR--VFINPIVTPLADELYSYEEGCLSVPEYYDKVDRPKHV 108
[128][TOP]
>UniRef100_C4WGL8 Peptide deformylase n=1 Tax=Ochrobactrum intermedium LMG 3301
RepID=C4WGL8_9RHIZ
Length = 175
Score = 86.3 bits (212), Expect = 1e-15
Identities = 45/108 (41%), Positives = 66/108 (61%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL I+ PDP+LR +K ++ FD+ L+ MFD MY GIGL+A QVG ++++V +
Sbjct: 5 PLLIL--PDPVLRQVSKPVERFDDQLRKFAGDMFDTMYDAPGIGLAAIQVGEPIRMLVID 62
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
A E V +NP+I +D+ ++EGCLS P YAEV RP ++
Sbjct: 63 LAKEGEPKAPHVFINPEIVGVTDEASTYEEGCLSIPDYYAEVERPAAI 110
[129][TOP]
>UniRef100_B6BGT4 Peptide deformylase n=1 Tax=Campylobacterales bacterium GD 1
RepID=B6BGT4_9PROT
Length = 174
Score = 86.3 bits (212), Expect = 1e-15
Identities = 46/110 (41%), Positives = 72/110 (65%), Gaps = 3/110 (2%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L IVEYPD IL+ +++++ FD+ L +L+DAM+ +M KT+GIGL+A QV Q+++ N
Sbjct: 3 LSIVEYPDKILKQISEKVEKFDKELHDLLDAMYPIMVKTNGIGLAAIQVARPKQVLILNI 62
Query: 418 AGEPGE---GKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E GE I +VNP I K ++V + EGCLS P Y +++R +++
Sbjct: 63 PEEDGEQPIENLIEMVNPIIVKKDGEIV-YQEGCLSVPSFYEDIIRFENI 111
[130][TOP]
>UniRef100_A8CUU3 Peptide deformylase n=1 Tax=Dehalococcoides sp. VS
RepID=A8CUU3_9CHLR
Length = 167
Score = 86.3 bits (212), Expect = 1e-15
Identities = 45/107 (42%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
+I E P+P+LR K K++ D +++ L+D M + M DG GL+APQVG++++L+VF
Sbjct: 5 RICELPEPVLRKKAKKVPSIDSSIQTLIDDMIETMSSADGAGLAAPQVGVSLRLVVFR-- 62
Query: 421 GEPGEGKEIVLVNPKI-KKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
EP + VL+NP+I KK + V EGCLS PG + E+ R ++V
Sbjct: 63 -EPDAKEATVLINPEIVKKEGQRQV--TEGCLSIPGYFGELTRAETV 106
[131][TOP]
>UniRef100_Q92SH6 Peptide deformylase n=1 Tax=Sinorhizobium meliloti RepID=DEF_RHIME
Length = 174
Score = 86.3 bits (212), Expect = 1e-15
Identities = 39/105 (37%), Positives = 66/105 (62%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
++ PDP+LR + ++ D +++ L D M + MY GIGL+A Q+G+ +L+V +
Sbjct: 6 LIILPDPVLRQVSTPVETIDADIRRLADDMLETMYDAPGIGLAAIQIGVPKRLLVLDVTK 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E E + +V +NPK+ + S++ ++EGCLS P YAEV RP ++
Sbjct: 66 EGEEKQPLVFINPKVVRSSEERSVYEEGCLSIPDYYAEVERPAAI 110
[132][TOP]
>UniRef100_B3PGY7 Peptide deformylase n=1 Tax=Cellvibrio japonicus Ueda107
RepID=DEF_CELJU
Length = 169
Score = 86.3 bits (212), Expect = 1e-15
Identities = 42/104 (40%), Positives = 68/104 (65%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR K + D++++ LVD MF+ MY GIGL+A QV ++ +++V +
Sbjct: 4 LPILEFPDPRLRTVAKPVTQVDDSIRQLVDDMFETMYDAPGIGLAATQVNVHKRVVVIDV 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRP 549
+ + + + +V +NP+I+ ++L +DEGCLS PG Y V RP
Sbjct: 64 SED--KSQPLVFINPEIEVLDEELSQYDEGCLSVPGFYETVERP 105
[133][TOP]
>UniRef100_Q88RR1 Peptide deformylase 1 n=2 Tax=Pseudomonas putida RepID=DEF1_PSEPK
Length = 168
Score = 86.3 bits (212), Expect = 1e-15
Identities = 43/107 (40%), Positives = 67/107 (62%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR K + FD+ L+ L+D MF+ MY+ GIGL+A QV ++ Q++V +
Sbjct: 4 LNILEFPDPRLRTLAKPVTEFDDALRQLIDDMFETMYEAPGIGLAATQVNVHKQVVVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E + V +NP +++ + + + EGCLS PG Y V RP V
Sbjct: 64 SEDRSEPR--VFINPSVEELTHDMGQYQEGCLSVPGFYENVDRPLRV 108
[134][TOP]
>UniRef100_Q1MM81 Peptide deformylase n=1 Tax=Rhizobium leguminosarum bv. viciae 3841
RepID=Q1MM81_RHIL3
Length = 171
Score = 85.9 bits (211), Expect = 2e-15
Identities = 44/105 (41%), Positives = 66/105 (62%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
++ PDP+LR +K I+ D +L+ L D M + MY GIGL+A Q+G+ +++V + +
Sbjct: 6 LIILPDPVLRQLSKPIERVDSDLQRLADDMLETMYDAPGIGLAAIQIGVPRRMLVIDISR 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E E + V +NP+I K SD+ ++EGCLS P YAEV RP V
Sbjct: 66 EGEEKQPQVFINPEIVKSSDERSLYEEGCLSIPDYYAEVERPAVV 110
[135][TOP]
>UniRef100_B3PZF4 Peptide deformylase n=1 Tax=Rhizobium etli CIAT 652
RepID=B3PZF4_RHIE6
Length = 171
Score = 85.9 bits (211), Expect = 2e-15
Identities = 44/105 (41%), Positives = 66/105 (62%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
++ PDP+LR +K I+ D +L+ L D M + MY GIGL+A Q+G+ +++V + +
Sbjct: 6 LIILPDPLLRQLSKPIERVDADLQRLADDMLETMYDAPGIGLAAIQIGVPRRMLVIDVSR 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E E + V +NP+I K SD+ ++EGCLS P YAEV RP V
Sbjct: 66 EGEEKQPQVFINPEIVKSSDERSVYEEGCLSIPDYYAEVERPAVV 110
[136][TOP]
>UniRef100_A6U5I4 Peptide deformylase n=1 Tax=Sinorhizobium medicae WSM419
RepID=A6U5I4_SINMW
Length = 174
Score = 85.9 bits (211), Expect = 2e-15
Identities = 39/105 (37%), Positives = 66/105 (62%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
++ PDP+LR + ++ D +++ L D M + MY GIGL+A Q+G+ +L+V +
Sbjct: 6 LIILPDPVLRQVSTPVETVDADIRRLADDMLETMYDAPGIGLAAIQIGVPKRLLVLDVTK 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E E + +V +NPK+ + S++ ++EGCLS P YAEV RP ++
Sbjct: 66 EGEEKQPLVFINPKVVRSSEERSVYEEGCLSIPDYYAEVERPAAI 110
[137][TOP]
>UniRef100_C5BKQ0 Peptide deformylase n=1 Tax=Teredinibacter turnerae T7901
RepID=DEF_TERTT
Length = 168
Score = 85.9 bits (211), Expect = 2e-15
Identities = 43/107 (40%), Positives = 66/107 (61%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PD LR K ++ DE ++ ++D MF+ MY GIGL+A QV ++ Q++V +
Sbjct: 4 LPILEFPDARLRTVAKPVEQVDERVRAIIDDMFETMYDAPGIGLAATQVNVHEQIIVIDI 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ E +V +NP+I + L ++EGCLS PG Y EV RP+ V
Sbjct: 64 SENHDE--PLVFINPRIDVLDETLFDYEEGCLSVPGFYEEVTRPRHV 108
[138][TOP]
>UniRef100_Q3Z8F6 Peptide deformylase n=1 Tax=Dehalococcoides ethenogenes 195
RepID=DEF_DEHE1
Length = 167
Score = 85.9 bits (211), Expect = 2e-15
Identities = 46/107 (42%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
+I E P+PILR K K++ D +++ L+D M + M DG GL+APQVG++++L+VF
Sbjct: 5 RICELPEPILRKKAKKVPSIDGSIQTLIDDMIETMKSADGAGLAAPQVGVSLRLIVFR-- 62
Query: 421 GEPGEGKEIVLVNPKI-KKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
EP + VL+NP+I KK + V EGCLS PG + E+ R ++V
Sbjct: 63 -EPDAKEATVLINPEIVKKEGQRQV--TEGCLSIPGYFGELTRAETV 106
[139][TOP]
>UniRef100_UPI00019073D4 peptide deformylase n=1 Tax=Rhizobium etli GR56 RepID=UPI00019073D4
Length = 171
Score = 85.5 bits (210), Expect = 2e-15
Identities = 44/105 (41%), Positives = 66/105 (62%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
++ PDPILR ++ I+ D +L+ L D M + MY GIGL+A Q+G+ +++V + +
Sbjct: 6 LIILPDPILRQLSQPIERMDADLQRLADDMLETMYDAPGIGLAAIQIGVPRRMLVIDVSR 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E E + V +NP+I K SD+ ++EGCLS P YAEV RP V
Sbjct: 66 EGEEKQPQVFINPEIVKSSDERSVYEEGCLSIPDYYAEVERPAVV 110
[140][TOP]
>UniRef100_Q1I2G5 Peptide deformylase n=1 Tax=Pseudomonas entomophila L48
RepID=Q1I2G5_PSEE4
Length = 168
Score = 85.5 bits (210), Expect = 2e-15
Identities = 43/107 (40%), Positives = 67/107 (62%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR K + FD+ L+ L+D MF+ MY+ GIGL+A QV ++ Q++V +
Sbjct: 4 LNILEFPDPRLRTIAKPVTEFDDALRQLIDDMFETMYEAPGIGLAATQVNVHKQVVVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E + V +NP +++ + + + EGCLS PG Y V RP V
Sbjct: 64 SEDRSEPR--VFINPTVEELTHDMGQYQEGCLSVPGFYENVDRPLRV 108
[141][TOP]
>UniRef100_Q1GWJ8 Peptide deformylase n=1 Tax=Sphingopyxis alaskensis
RepID=Q1GWJ8_SPHAL
Length = 180
Score = 85.5 bits (210), Expect = 2e-15
Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN- 414
L I+E PDP LR +K ++ FD LK LV MF+ MY GIGL+A QVG+ +++V +
Sbjct: 7 LPIIETPDPRLRVISKPVETFDAELKQLVADMFETMYDAPGIGLAAIQVGVPKRILVIDL 66
Query: 415 --PAGEPGEGKEI-----VLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E EGK++ V +NP +SD+ + EGCLS P YA+V RP V
Sbjct: 67 QEADPEDPEGKKVIRTPRVFINPVFSDFSDEHSVYQEGCLSVPEQYADVTRPAEV 121
[142][TOP]
>UniRef100_Q3ZXA9 Peptide deformylase n=1 Tax=Dehalococcoides sp. CBDB1
RepID=DEF_DEHSC
Length = 167
Score = 85.5 bits (210), Expect = 2e-15
Identities = 45/107 (42%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
+I E P+P+LR K K++ D +++ L+D M + M DG GL+APQVG++++L+VF
Sbjct: 5 RICELPEPVLRKKAKKVPSIDGSIQTLIDDMIETMNSADGAGLAAPQVGVSLRLVVFR-- 62
Query: 421 GEPGEGKEIVLVNPKI-KKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
EP + VL+NP+I KK + V EGCLS PG + E+ R ++V
Sbjct: 63 -EPDTKEATVLINPEIVKKEGQRQV--TEGCLSIPGYFGELTRAETV 106
[143][TOP]
>UniRef100_A5FRA7 Peptide deformylase n=1 Tax=Dehalococcoides sp. BAV1
RepID=DEF_DEHSB
Length = 167
Score = 85.5 bits (210), Expect = 2e-15
Identities = 45/107 (42%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
+I E P+P+LR K K++ D +++ L+D M + M DG GL+APQVG++++L+VF
Sbjct: 5 RICELPEPVLRKKAKKVPSIDGSIQTLIDDMIETMNSADGAGLAAPQVGVSLRLVVFR-- 62
Query: 421 GEPGEGKEIVLVNPK-IKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
EP + VL+NP+ IKK + V EGCLS PG + E+ R ++V
Sbjct: 63 -EPDTKEATVLINPEIIKKEGQRQV--TEGCLSIPGYFGELTRAETV 106
[144][TOP]
>UniRef100_UPI0001B4768A peptide deformylase n=1 Tax=Brucella sp. 83/13 RepID=UPI0001B4768A
Length = 175
Score = 85.1 bits (209), Expect = 3e-15
Identities = 42/105 (40%), Positives = 63/105 (60%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
++ PDP+LR + ++ FD+ L+ MFD MY GIGL+A QVG ++++V + A
Sbjct: 6 LIILPDPVLRQVSAPVERFDDQLRKFASDMFDTMYDAPGIGLAAIQVGEPIRMLVIDLAK 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E + +NP I + SD+ ++EGCLS P YAEV RP +V
Sbjct: 66 EGEPKAPHIFINPTIVQSSDERSTYEEGCLSIPDYYAEVERPATV 110
[145][TOP]
>UniRef100_UPI00019041AE peptide deformylase n=1 Tax=Rhizobium etli Kim 5
RepID=UPI00019041AE
Length = 171
Score = 85.1 bits (209), Expect = 3e-15
Identities = 44/105 (41%), Positives = 66/105 (62%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
++ PDPILR ++ I+ D +L+ L D M + MY GIGL+A Q+G+ +++V + +
Sbjct: 6 LIILPDPILRQLSQPIERVDADLQRLADDMLETMYDAPGIGLAAIQIGVPRRMLVIDVSR 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E E + V +NP+I K SD+ ++EGCLS P YAEV RP V
Sbjct: 66 EGEEKQPQVFINPEIVKSSDERSVYEEGCLSIPDYYAEVERPAVV 110
[146][TOP]
>UniRef100_C6XHM7 Peptide deformylase n=1 Tax=Candidatus Liberibacter asiaticus str.
psy62 RepID=C6XHM7_LIBAP
Length = 170
Score = 85.1 bits (209), Expect = 3e-15
Identities = 42/101 (41%), Positives = 63/101 (62%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
+V +PDPILR ++ I+ + ++ NL+D M +VMY TDGIGL+A Q+G+ +L+V +
Sbjct: 6 LVIFPDPILRRVSRPIEKINSDIMNLIDNMLEVMYSTDGIGLAAVQIGVLYRLVVIDLQD 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVR 546
+V +NPKI +SD + EGCLS P A+V R
Sbjct: 66 HAHRKNPMVFINPKIITFSDDFSVYQEGCLSIPDYRADVKR 106
[147][TOP]
>UniRef100_C6N404 Peptide deformylase n=1 Tax=Legionella drancourtii LLAP12
RepID=C6N404_9GAMM
Length = 171
Score = 85.1 bits (209), Expect = 3e-15
Identities = 45/106 (42%), Positives = 68/106 (64%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
KI+ PDP LR +K + FD+ L+ L+D MF+ MY G+GL+A Q+G++++L V +
Sbjct: 5 KILYLPDPRLRELSKPVVTFDDTLQTLIDDMFETMYDAHGVGLAAAQIGVSLRLSVIDIL 64
Query: 421 GEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
G+ + +IV++NP+I S+ FDEGCLS PG Y V R + V
Sbjct: 65 GD--KKNQIVIINPEIIA-SEGESKFDEGCLSVPGAYDTVTRAEKV 107
[148][TOP]
>UniRef100_A2BZN6 Peptide deformylase n=1 Tax=Prochlorococcus marinus str. NATL1A
RepID=DEF_PROM1
Length = 202
Score = 85.1 bits (209), Expect = 3e-15
Identities = 44/128 (34%), Positives = 69/128 (53%)
Frame = +1
Query: 175 KRVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKT 354
K +K ++ + + PLK+ + D LR RI D+ ++ L M MY +
Sbjct: 10 KNAEKKKPSISVSKEPVENPPLKVYQLGDEALRTPANRIVKVDDAIRKLAKDMLITMYSS 69
Query: 355 DGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYA 534
GIGL+APQVG+ +L+V + E +V +NP+I S + ++EGCLS PG+Y
Sbjct: 70 KGIGLAAPQVGIQKRLLVIDLNFEDPNSPPMVFINPEIISSSATVDTYEEGCLSIPGVYL 129
Query: 535 EVVRPQSV 558
V+RP S+
Sbjct: 130 NVLRPSSI 137
[149][TOP]
>UniRef100_UPI0001903290 peptide deformylase n=1 Tax=Rhizobium etli 8C-3 RepID=UPI0001903290
Length = 171
Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/105 (41%), Positives = 64/105 (60%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
++ PDP LR +K I+ D L+ L D M + MY GIGL+A Q+G+ +++V + +
Sbjct: 6 LIILPDPFLRQLSKPIERVDAELQRLADDMLETMYDAPGIGLAAIQIGVPRRMLVIDVSR 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E E + V +NP+I K SD+ ++EGCLS P YAEV RP V
Sbjct: 66 EGEEKQPQVFINPEIVKSSDERSVYEEGCLSIPDYYAEVERPAVV 110
[150][TOP]
>UniRef100_Q5FPX1 Peptide deformylase n=1 Tax=Gluconobacter oxydans
RepID=Q5FPX1_GLUOX
Length = 184
Score = 84.7 bits (208), Expect = 4e-15
Identities = 46/111 (41%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENL---KNLVDAMFDVMYKTDGIGLSAPQVGLNVQLM 405
P I+ P P+LR + D+ E++ + + MF MYK GIGL+APQVGL ++
Sbjct: 15 PTPILIAPQPVLREVTR--DVRPEDIAFIREQLPGMFSAMYKAPGIGLAAPQVGLGMRFA 72
Query: 406 VFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + A E + ++L+NP+I SD+L +EGCLS P YAEVVRP+S+
Sbjct: 73 LVDVAEEDAPREPMLLINPEIISDSDQLAAREEGCLSLPNQYAEVVRPESI 123
[151][TOP]
>UniRef100_Q2WAS8 Peptide deformylase n=1 Tax=Magnetospirillum magneticum AMB-1
RepID=Q2WAS8_MAGSA
Length = 190
Score = 84.7 bits (208), Expect = 4e-15
Identities = 43/107 (40%), Positives = 68/107 (63%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+ PDP+L++K+K + D+ ++ L+ M D MY GIGL+APQ+G+ +++V +
Sbjct: 24 LPILTAPDPVLKSKSKPVATVDDRIRTLLADMLDTMYHAPGIGLAAPQIGVLERVIVMDI 83
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + I +VNP+I SD+ ++EGCLS P Y+ VVRP SV
Sbjct: 84 GRKEEDRAPIRMVNPEIVWASDEDNTYEEGCLSVPEHYSNVVRPASV 130
[152][TOP]
>UniRef100_B5RKW4 Peptide deformylase n=2 Tax=Borrelia RepID=B5RKW4_BORDL
Length = 165
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/107 (38%), Positives = 69/107 (64%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
++IV YPD +LR + K ++ D+ L++++ M +M K+ G+GL+APQVGL++ + V
Sbjct: 1 MEIVFYPDDLLRVQTKDVENIDDELRSIIFEMIGLMDKSKGVGLAAPQVGLDLSIFVVR- 59
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ K +V +NP I S +L + EGCLS PG+Y ++ RP+S+
Sbjct: 60 --KNMMSKPLVFINPVITSKSVELSVYKEGCLSIPGVYYDLSRPKSI 104
[153][TOP]
>UniRef100_C6JQJ8 Peptide deformylase n=1 Tax=Fusobacterium varium ATCC 27725
RepID=C6JQJ8_FUSVA
Length = 173
Score = 84.7 bits (208), Expect = 4e-15
Identities = 38/102 (37%), Positives = 68/102 (66%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
+I +Y DP+LR K ++ D+N++ ++ M + MY G+GL+APQVG++ +++V +
Sbjct: 4 EIKKYGDPVLREKTVEVETVDDNIREILQNMVETMYDKKGVGLAAPQVGISKRMLVLDWT 63
Query: 421 GEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVR 546
GE E +++ +NP I +++ + ++EGCLS PGIY +V R
Sbjct: 64 GEGEELRKV--INPVITPLTEEKIDWEEGCLSIPGIYKKVER 103
[154][TOP]
>UniRef100_B9X8Z0 Peptide deformylase n=1 Tax=Borrelia spielmanii A14S
RepID=B9X8Z0_9SPIO
Length = 165
Score = 84.7 bits (208), Expect = 4e-15
Identities = 41/107 (38%), Positives = 69/107 (64%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+++V YP+ +LR K K+ID D +++ M ++M + G+GL+APQVGL++ L V
Sbjct: 1 MEMVFYPNDLLRVKTKQIDNIDNKIRDYAKKMIELMDISSGVGLAAPQVGLDLSLFVVR- 59
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E K +V +NP I + S +L + EGCLS PG+Y +++RP+++
Sbjct: 60 --ENKMAKPLVFINPLITETSYELNSYKEGCLSIPGVYYDLMRPKTI 104
[155][TOP]
>UniRef100_C1F541 Peptide deformylase n=1 Tax=Acidobacterium capsulatum ATCC 51196
RepID=DEF_ACIC5
Length = 170
Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/105 (41%), Positives = 69/105 (65%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
IV+YPDP+L+ + + F+E L+ LVD MF+ MY+ GIGL+APQ+G++ +L V + +
Sbjct: 6 IVKYPDPVLQQPAEPVTEFNEELRALVDDMFESMYEAKGIGLAAPQIGISKRLTVIDLSF 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ ++IVL+NP+I + +EGCLS P I +VVR + V
Sbjct: 66 KENPDEKIVLINPEIIHREGRQYE-EEGCLSLPDIREKVVRAEKV 109
[156][TOP]
>UniRef100_C6AB93 Peptide deformylase n=1 Tax=Bartonella grahamii as4aup
RepID=C6AB93_BARGA
Length = 178
Score = 84.3 bits (207), Expect = 6e-15
Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
+V PDPILR +K +D D L+ L D M + MY GIGL+A Q+G+ ++++V + +G
Sbjct: 6 LVTLPDPILREVSKPVDQVDSALQKLADDMLETMYNAKGIGLAAIQIGIPLRMLVIDVSG 65
Query: 424 --EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQ 552
E K V++NP+I SD+ + EGCLS P +AEV RP+
Sbjct: 66 NSEDERKKPFVIINPEILWLSDERNIYKEGCLSIPDYFAEVERPK 110
[157][TOP]
>UniRef100_C7RA07 Peptide deformylase n=1 Tax=Kangiella koreensis DSM 16069
RepID=C7RA07_KANKD
Length = 175
Score = 84.3 bits (207), Expect = 6e-15
Identities = 43/107 (40%), Positives = 67/107 (62%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L+I+E+PDP LR K K + F + L+ +D+MF+ MY GIGL+A QV ++ Q V +
Sbjct: 4 LEILEFPDPRLRTKAKPVTDFGDELQQQIDSMFETMYAAPGIGLAATQVNIHKQFFVIDV 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E +V +NP+I + + +EGCLSFPG+YA+V R +
Sbjct: 64 SDDKSE--PLVFINPQIVE-KRGVEEMEEGCLSFPGVYAKVQRANEI 107
[158][TOP]
>UniRef100_B4AE49 Peptide deformylase n=1 Tax=Bacillus pumilus ATCC 7061
RepID=B4AE49_BACPU
Length = 160
Score = 84.3 bits (207), Expect = 6e-15
Identities = 44/105 (41%), Positives = 64/105 (60%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
IV +P +L K + +D FD+ LK L+D M+D M + DG+GL+APQ+G++ ++ V +
Sbjct: 6 IVMHPAEVLEQKAEPVDTFDKKLKKLLDDMYDTMLELDGVGLAAPQIGISQRIAVVDIGE 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
EPG I LVNP++ + EGCLSFP +Y V RP V
Sbjct: 66 EPG---RIDLVNPEVLEIKGSQTDI-EGCLSFPSLYGTVERPSYV 106
[159][TOP]
>UniRef100_C6T5G3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T5G3_SOYBN
Length = 125
Score = 84.3 bits (207), Expect = 6e-15
Identities = 52/91 (57%), Positives = 58/91 (63%), Gaps = 6/91 (6%)
Frame = +1
Query: 124 STVNRT----SPLTSSVRAEVK-RVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKR 288
S +NRT P T+ RA K S D VAS D +F PLKIVEYPDP LRA+NKR
Sbjct: 32 SLLNRTLSVNPPRTAPPRAMAKPSFSTAQDLVASPGDFEFAQPLKIVEYPDPRLRARNKR 91
Query: 289 IDIFDENLKNLVDAMFDVMYKTDGI-GLSAP 378
I FD++LK LV MFDVMYK DGI LS P
Sbjct: 92 IVAFDDSLKKLVHEMFDVMYKADGIWSLSTP 122
[160][TOP]
>UniRef100_B8BSA6 Dubious peptide deformylase (Fragment) n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8BSA6_THAPS
Length = 180
Score = 84.3 bits (207), Expect = 6e-15
Identities = 46/111 (41%), Positives = 68/111 (61%), Gaps = 6/111 (5%)
Frame = +1
Query: 232 TPLKIVEYPDPILRAKNKRIDIFD-----ENLKNLVDAMFDVMYKTDGIGLSAPQVGLNV 396
T L++++YP P LRA N I + + + MF VMY T+G GL+APQVG+N
Sbjct: 1 TDLRVLKYPHPALRAPNAEITEEELTGPGSEISRIAKEMFLVMYATNGAGLAAPQVGINK 60
Query: 397 QLMVFNPAGEPGEG-KEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVR 546
+LMV+N +G+ +E+++VNPKI ++S EGCLSFP + +V R
Sbjct: 61 RLMVYNESGDSKRWMQEVIMVNPKIVEFSSATDIEQEGCLSFPEMGGDVQR 111
[161][TOP]
>UniRef100_B9JQX2 Peptide deformylase n=1 Tax=Agrobacterium vitis S4
RepID=B9JQX2_AGRVS
Length = 176
Score = 84.0 bits (206), Expect = 7e-15
Identities = 43/112 (38%), Positives = 68/112 (60%)
Frame = +1
Query: 223 QFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQL 402
+F T I+ PDP+LR ++ I+ D +L+ L+D M + MY GIGL+A Q+ + +L
Sbjct: 3 RFMTTKPIIILPDPLLREVSQPIERIDADLERLIDDMLETMYDAPGIGLAAVQIAVPRRL 62
Query: 403 MVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+V + + E + + +V +NP+I S ++EGCLS P YAEV RP +V
Sbjct: 63 LVIDVSKEGEDKQPLVFINPEIIGSSQARSTYEEGCLSIPDYYAEVERPAAV 114
[162][TOP]
>UniRef100_B9J8C4 Peptide deformylase n=1 Tax=Agrobacterium radiobacter K84
RepID=B9J8C4_AGRRK
Length = 171
Score = 84.0 bits (206), Expect = 7e-15
Identities = 41/105 (39%), Positives = 64/105 (60%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
++ PDP+LR +K I+ D + L D M + MY GIGL+A Q+G+ +++V + A
Sbjct: 6 LIILPDPLLRQASKPIERVDTEILRLADDMLETMYDAPGIGLAAVQIGVARRMLVIDVAR 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E + + +V +NP++ SD+ ++EGCLS P YAEV RP V
Sbjct: 66 EGEDKQPLVFINPEVVASSDERSVYEEGCLSIPDYYAEVERPARV 110
[163][TOP]
>UniRef100_C8W757 Peptide deformylase n=1 Tax=Atopobium parvulum DSM 20469
RepID=C8W757_ATOPD
Length = 180
Score = 84.0 bits (206), Expect = 7e-15
Identities = 41/105 (39%), Positives = 64/105 (60%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
+V +PDP L K + ID +++++ + + M VMY TDG+GL+ PQ+G +++V +
Sbjct: 8 MVLWPDPRLSQKCEEIDDINDDVRKMAEHMLKVMYATDGVGLAGPQIGYMKRMVVIDVDY 67
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
G+ VL+NP+IK + ++EGCLSFPGI V RP V
Sbjct: 68 PNGQENPFVLINPEIKVADGEPRVYEEGCLSFPGITVPVTRPSHV 112
[164][TOP]
>UniRef100_C7I0P8 Peptide deformylase n=1 Tax=Thiomonas intermedia K12
RepID=C7I0P8_THIIN
Length = 168
Score = 84.0 bits (206), Expect = 7e-15
Identities = 42/107 (39%), Positives = 71/107 (66%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I++YPDP L K + DE ++ LV AMF+ MY ++G+GL+A QV ++ +++V +
Sbjct: 4 LTILQYPDPRLYIVAKPVAAVDERVRALVAAMFETMYASNGVGLAATQVDVHERIIVMDT 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + + + L+NP+I ++S + ++EGCLS PGIY +V RP +V
Sbjct: 64 SEQ--RNQPLALINPEIVRHSAEDKEWEEGCLSVPGIYDKVTRPATV 108
[165][TOP]
>UniRef100_C3WIT6 Peptide deformylase n=1 Tax=Fusobacterium sp. 2_1_31
RepID=C3WIT6_9FUSO
Length = 174
Score = 84.0 bits (206), Expect = 7e-15
Identities = 45/108 (41%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDEN--LKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
+I +Y D +L+ K +++ + N + +D M + MYKTDGIGL+APQVG++ ++ V
Sbjct: 4 EIRKYGDDVLKQIAKEVELSEINDEFRKFLDDMVETMYKTDGIGLAAPQVGVSKRVFVC- 62
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E G GK L+NP I+ +++ F+EGCLS PGIY +V RP+ V
Sbjct: 63 ---EDGTGKIRKLINPVIEPLTEETQEFEEGCLSVPGIYKKVERPKKV 107
[166][TOP]
>UniRef100_C1P6T6 Peptide deformylase n=1 Tax=Bacillus coagulans 36D1
RepID=C1P6T6_BACCO
Length = 161
Score = 84.0 bits (206), Expect = 7e-15
Identities = 46/107 (42%), Positives = 64/107 (59%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
++IV+YP IL K KR+ F +LK ++D M++ M + DG+GL+APQVG+N Q+ V +
Sbjct: 2 MEIVKYPAAILEEKCKRVTAFGSSLKAVLDEMYETMLEADGVGLAAPQVGINQQIAVIDT 61
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
G I L+NPKI + EGCLSFPG+Y V R V
Sbjct: 62 GDGTG---RIDLINPKIVTRRGEQTDV-EGCLSFPGVYGTVSRAHYV 104
[167][TOP]
>UniRef100_B7XTF3 Peptide deformylase n=1 Tax=Borrelia garinii PBr RepID=B7XTF3_BORGA
Length = 165
Score = 84.0 bits (206), Expect = 7e-15
Identities = 41/107 (38%), Positives = 68/107 (63%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+++V YP+ +LR K K+ID D +++ M ++M + G+GL+APQVGL++ L V
Sbjct: 1 MEMVFYPNDLLRVKTKQIDSIDNKIRDYAKKMIELMDISGGVGLAAPQVGLDLSLFVVR- 59
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E K +V +NP I + S +L + EGCLS PG+Y +++RP+ +
Sbjct: 60 --ENRMAKPLVFINPSIIETSYELNSYREGCLSIPGVYYDLMRPKGI 104
[168][TOP]
>UniRef100_A0NSA8 Peptide deformylase n=1 Tax=Labrenzia aggregata IAM 12614
RepID=A0NSA8_9RHOB
Length = 202
Score = 84.0 bits (206), Expect = 7e-15
Identities = 49/127 (38%), Positives = 70/127 (55%)
Frame = +1
Query: 178 RVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTD 357
R R D +VA + V+ T I+ PDP+LR + D++++ L D M + MY
Sbjct: 15 RYFRVDRRVAISY-VRQMTIRPIITIPDPVLREVCAPVATVDDDVRKLADDMLETMYDAP 73
Query: 358 GIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAE 537
GIGL+A Q+GL ++ V + A + + +V +NPKI SD L + EGCLS P Y E
Sbjct: 74 GIGLAASQIGLLQRIFVLDVAKDDAPKEPMVFINPKIVWSSDDLSVYQEGCLSIPDYYEE 133
Query: 538 VVRPQSV 558
V RP V
Sbjct: 134 VERPAEV 140
[169][TOP]
>UniRef100_A9ILK4 Peptide deformylase n=1 Tax=Bartonella tribocorum CIP 105476
RepID=DEF_BART1
Length = 178
Score = 84.0 bits (206), Expect = 7e-15
Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
+V PDPILR +K ++ D L+ L D M + MY GIGL+A Q+G+ ++++V + +G
Sbjct: 6 LVTLPDPILREVSKPVEQVDTALQELADDMLETMYHAKGIGLAAIQIGIPLRMLVIDVSG 65
Query: 424 --EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQ 552
E + K +V++NP+I SD+ + EGCLS P +AEV RP+
Sbjct: 66 NAEDTQKKPLVIINPEILWLSDERNVYKEGCLSIPDYFAEVERPK 110
[170][TOP]
>UniRef100_B1YIQ2 Peptide deformylase n=1 Tax=Exiguobacterium sibiricum 255-15
RepID=B1YIQ2_EXIS2
Length = 461
Score = 83.6 bits (205), Expect = 9e-15
Identities = 43/106 (40%), Positives = 67/106 (63%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
K+VE P+ +LR K +R+ FD+ L ++D MFD MY+ DG+GL+APQ+ +++ V +
Sbjct: 3 KVVEVPNEVLRQKCQRVTKFDKKLGKMIDRMFDTMYEYDGVGLAAPQINQPIRVAVVHTD 62
Query: 421 GEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E G I L+NP+I + + + DEGCLS PGI+ V R + +
Sbjct: 63 DETG---PIELINPEIIEATGSEID-DEGCLSMPGIFGPVERFEQI 104
[171][TOP]
>UniRef100_C7JEJ3 N-formylmethionylaminoacyl-tRNA deformylase n=8 Tax=Acetobacter
pasteurianus RepID=C7JEJ3_ACEP3
Length = 186
Score = 83.6 bits (205), Expect = 9e-15
Identities = 47/125 (37%), Positives = 72/125 (57%), Gaps = 7/125 (5%)
Frame = +1
Query: 205 ASATDVQFET------PLKIVEYPDPILRAKNKRIDIFD-ENLKNLVDAMFDVMYKTDGI 363
A+ TD+ F PL+I+ P P+LR K + + D ++ ++ MF MY+ GI
Sbjct: 4 AANTDISFSAASDGAAPLQILTPPHPVLRQKARLVKPEDVAEIRKILPNMFSAMYQAPGI 63
Query: 364 GLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVV 543
GL+APQVGL+ Q + GE IV++NP++ ++ + +EGCLS P YAEVV
Sbjct: 64 GLAAPQVGLS-QRFILVDLGEKDARDPIVMINPEVIAETEDMAVREEGCLSLPNQYAEVV 122
Query: 544 RPQSV 558
RP+ +
Sbjct: 123 RPEKI 127
[172][TOP]
>UniRef100_Q21PV5 Peptide deformylase n=1 Tax=Saccharophagus degradans 2-40
RepID=DEF_SACD2
Length = 172
Score = 83.6 bits (205), Expect = 9e-15
Identities = 42/107 (39%), Positives = 65/107 (60%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR K + D+ ++ L+D MF+ MY GIGL+A QV ++ Q++V +
Sbjct: 4 LPILEFPDPRLRTIAKPVAKVDQRIRTLIDDMFETMYDAPGIGLAATQVNVHEQVLVIDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E E +V +NP I+ + ++EGCLS PG Y +V RP+ +
Sbjct: 64 GEETKE--PMVFINPSIEILDQEHYEYEEGCLSVPGFYEQVSRPKHI 108
[173][TOP]
>UniRef100_B3QPU5 Peptide deformylase n=1 Tax=Chlorobaculum parvum NCIB 8327
RepID=DEF_CHLP8
Length = 187
Score = 83.6 bits (205), Expect = 9e-15
Identities = 45/109 (41%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMV--F 411
L I Y DP+L AK K + D +++ L+ MFD MYK GIGL+APQVG +++L+V
Sbjct: 3 LPINTYSDPVLTAKAKPLKGVDSSIRELIADMFDSMYKAPGIGLAAPQVGHSLRLLVVDI 62
Query: 412 NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ E + K +V++NP+I + + +EGCLS PG+ +VVRP +
Sbjct: 63 STIKEYADYKPMVVINPRIVSVAGRNA-MEEGCLSVPGVAGDVVRPSKI 110
[174][TOP]
>UniRef100_Q0SPA0 Peptide deformylase n=1 Tax=Borrelia afzelii PKo RepID=Q0SPA0_BORAP
Length = 165
Score = 83.2 bits (204), Expect = 1e-14
Identities = 40/107 (37%), Positives = 68/107 (63%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+++V YP+ +LR K K+ID D +++ M ++M + G+GL+APQVGL++ + V
Sbjct: 1 MEMVFYPNDLLRVKTKQIDNIDNKIRDYAKKMIELMDISGGVGLAAPQVGLDLSIFVVR- 59
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E K +V +NP I + S +L + EGCLS PG+Y +++RP+ +
Sbjct: 60 --ENKMAKPLVFINPVITETSYELNSYKEGCLSIPGVYYDLMRPKGI 104
[175][TOP]
>UniRef100_A9IFQ3 Peptide deformylase n=1 Tax=Bordetella petrii DSM 12804
RepID=A9IFQ3_BORPD
Length = 170
Score = 83.2 bits (204), Expect = 1e-14
Identities = 44/103 (42%), Positives = 65/103 (63%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+ YPDP L K K + + D+ ++ LV M D MY G+GL+A QV ++ +++V +
Sbjct: 4 LSILHYPDPRLHKKAKPVAVVDDRIRKLVRDMADTMYDAPGVGLAATQVDVHERVVVIDV 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVR 546
+ E E + VL+NP+I SD+ ++EGCLS PGIY EV R
Sbjct: 64 SEEGNELR--VLINPEITWKSDERQTYEEGCLSVPGIYDEVER 104
[176][TOP]
>UniRef100_B6AZV5 Peptide deformylase n=1 Tax=Rhodobacterales bacterium HTCC2083
RepID=B6AZV5_9RHOB
Length = 172
Score = 83.2 bits (204), Expect = 1e-14
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
LKI+ +PDP L+ + + +++ D M + MY GIGL+APQVG+ +++V +
Sbjct: 3 LKILIHPDPRLKKVCAAVPDISDKIRSFADDMLETMYTAPGIGLAAPQVGVLERMIVLDC 62
Query: 418 AGEPGEGKE-IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E G E +V+VNP++ SD+ +DEGCLS P YA+V RP+ V
Sbjct: 63 VKEDGAKPEPLVMVNPRVIAASDETNVYDEGCLSIPDQYADVTRPKEV 110
[177][TOP]
>UniRef100_B9MR36 Peptide deformylase n=1 Tax=Anaerocellum thermophilum DSM 6725
RepID=DEF_ANATD
Length = 166
Score = 83.2 bits (204), Expect = 1e-14
Identities = 50/106 (47%), Positives = 67/106 (63%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
KI Y D ILR K+K ++ FD+ L L+D M D MY+ +GIGL+APQVG+ + +V
Sbjct: 5 KIRTYEDEILRKKSKVVEKFDQRLCQLLDDMKDTMYEANGIGLAAPQVGVLKRAVVI--- 61
Query: 421 GEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ GEG I LVNP+I++ V EGCLS P ++ EV RPQ V
Sbjct: 62 -DIGEG-AIELVNPEIEQVEGSAVDV-EGCLSVPNVWGEVERPQKV 104
[178][TOP]
>UniRef100_C4L5X5 Peptide deformylase n=1 Tax=Exiguobacterium sp. AT1b
RepID=C4L5X5_EXISA
Length = 466
Score = 82.8 bits (203), Expect = 2e-14
Identities = 46/106 (43%), Positives = 67/106 (63%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
K+VE P+ ILR + + FD+ L+ VD +FD MY+ DG+G++APQV LN +L V +
Sbjct: 3 KVVEVPNDILRVTCEPVTKFDKKLRQTVDRLFDTMYEYDGVGVAAPQVNLNQRLAVVHTD 62
Query: 421 GEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E G +VL+NP+I + S + V EGCLS PG + V R +S+
Sbjct: 63 DETG---PLVLINPEIIETSGREVGL-EGCLSIPGEFGFVERHESI 104
[179][TOP]
>UniRef100_C0ZFZ8 Peptide deformylase n=1 Tax=Brevibacillus brevis NBRC 100599
RepID=C0ZFZ8_BREBN
Length = 158
Score = 82.8 bits (203), Expect = 2e-14
Identities = 43/101 (42%), Positives = 66/101 (65%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
IV++PDPILR K + F+ NL L+D M D MY DG+GL+APQVG++ +++V
Sbjct: 6 IVKHPDPILREKAMVVTKFNSNLHKLLDDMADTMYDADGVGLAAPQVGISKRVIVM---- 61
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVR 546
+ G+G I ++NP+I ++ + + EGCLS PG+ +V R
Sbjct: 62 DCGDGL-IEMINPEIIEHEGEQYDYPEGCLSIPGLQGDVRR 101
[180][TOP]
>UniRef100_B2V616 Peptide deformylase n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1
RepID=B2V616_SULSY
Length = 177
Score = 82.8 bits (203), Expect = 2e-14
Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
KI +PDPIL+ K +D FDE L+ ++ M++ MYK +G+GL+A Q+G+ Q++V + +
Sbjct: 4 KIRTWPDPILKEPTKEVDFFDERLQEYINKMWEFMYKEEGVGLAANQIGIPYQILVIDTS 63
Query: 421 GEPGEGKE-------IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+E +VL+NPKI + + V EGCLSFPG+ + R + V
Sbjct: 64 LREKRSEEEAEPPVKMVLINPKIVEKEGE-VQSTEGCLSFPGVQITIPRAKRV 115
[181][TOP]
>UniRef100_A9HKQ2 Peptide deformylase n=1 Tax=Gluconacetobacter diazotrophicus PAl 5
RepID=A9HKQ2_GLUDA
Length = 179
Score = 82.8 bits (203), Expect = 2e-14
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDE-NLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVF 411
P+ I+ P ILR K + + D +++ + MF MY+ GIGL+APQVG+ ++ +
Sbjct: 12 PMPILVAPQAILRQKARPVRPEDAAGVRDALPRMFAAMYQAPGIGLAAPQVGMGLRFAIV 71
Query: 412 NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ GE GE + ++L+NP + SD L +EGCLS P YAEV+RP V
Sbjct: 72 D-LGEEGERQPLILINPDVIAESDSLASREEGCLSLPNQYAEVIRPDRV 119
[182][TOP]
>UniRef100_A4XL82 Peptide deformylase n=1 Tax=Caldicellulosiruptor saccharolyticus
DSM 8903 RepID=A4XL82_CALS8
Length = 164
Score = 82.8 bits (203), Expect = 2e-14
Identities = 49/106 (46%), Positives = 70/106 (66%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
KI Y D ILR K+K ++ FD+ L +L+D M + MY+ +GIGL+APQVG+ + +V
Sbjct: 3 KIRIYEDEILRKKSKTVEKFDKRLHDLLDDMKETMYEANGIGLAAPQVGILKRAIVV--- 59
Query: 421 GEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+PG+G I LVNP+I +YS+ EGCLS P ++ EV RP+ V
Sbjct: 60 -DPGDG-AIELVNPQI-EYSEGSQIDIEGCLSVPNVWGEVERPKKV 102
[183][TOP]
>UniRef100_A1QYL5 Peptide deformylase n=1 Tax=Borrelia turicatae 91E135
RepID=A1QYL5_BORT9
Length = 165
Score = 82.8 bits (203), Expect = 2e-14
Identities = 42/107 (39%), Positives = 67/107 (62%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+KIV YP+ +LR K K + D L+N M ++M +G+GL+A QVGL++ + V
Sbjct: 1 MKIVCYPNDLLRIKTKTVLNIDNELRNTAFKMVNLMDAKNGVGLAASQVGLDLSIFVVR- 59
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E K ++ +NP I + S +LV + EGCLS PG+Y +++RP+S+
Sbjct: 60 --ENAMSKPLIFINPLITETSFELVLYKEGCLSIPGVYYDLLRPKSI 104
[184][TOP]
>UniRef100_C4FHQ1 Peptide deformylase n=1 Tax=Sulfurihydrogenibium yellowstonense
SS-5 RepID=C4FHQ1_9AQUI
Length = 177
Score = 82.8 bits (203), Expect = 2e-14
Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
KI +PDPIL+ K +D FDE L+ ++ M++ MYK +G+GL+A Q+G+ Q++V + +
Sbjct: 4 KIRIWPDPILKEPTKEVDFFDERLQEYINKMWEFMYKEEGVGLAANQIGIPYQILVIDTS 63
Query: 421 GEPGEGKE-------IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+E +VL+NPKI + + V EGCLSFPG+ + R + V
Sbjct: 64 LRENRSEEETEPPVKMVLINPKIVEKEGE-VQSTEGCLSFPGVQITIPRAKRV 115
[185][TOP]
>UniRef100_B9X4J0 Peptide deformylase n=4 Tax=Borrelia burgdorferi RepID=B9X4J0_BORBU
Length = 165
Score = 82.8 bits (203), Expect = 2e-14
Identities = 40/107 (37%), Positives = 70/107 (65%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+++V YP+ +LR K K+I+ D+ +++ M ++M + G+GL+APQVGL++ L V
Sbjct: 1 MEMVFYPNDLLRVKTKQIENIDDKIRDYAKKMIELMDISGGVGLAAPQVGLDLALFVVR- 59
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E + +V +NP I + S +L + EGCLS PG+Y +++RP++V
Sbjct: 60 --ENKMARPLVFINPSIIETSYELSSYKEGCLSIPGVYYDLMRPKAV 104
[186][TOP]
>UniRef100_B6AKA3 Peptide deformylase n=1 Tax=Leptospirillum sp. Group II '5-way CG'
RepID=B6AKA3_9BACT
Length = 177
Score = 82.8 bits (203), Expect = 2e-14
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVF- 411
P I+ Y DP L K+ + D+ + +LV MF+++Y+ GIG++APQVG N++ VF
Sbjct: 3 PSGILSYGDPRLLVKSTEVTRIDQEISDLVRGMFELLYRVPGIGIAAPQVGCNMRFFVFD 62
Query: 412 -NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVR 546
N +PG + ++NP I + +EGCLSFPGI+ V R
Sbjct: 63 MNRRADPGSRTPVTIINPVISAKEGSITQ-EEGCLSFPGIFVPVER 107
[187][TOP]
>UniRef100_A9CX95 Peptide deformylase n=1 Tax=Hoeflea phototrophica DFL-43
RepID=A9CX95_9RHIZ
Length = 172
Score = 82.8 bits (203), Expect = 2e-14
Identities = 40/105 (38%), Positives = 64/105 (60%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
+V PDPILR ++ ++ D L+ +D M + MY GIGL+A QVG+ +L+V + AG
Sbjct: 6 LVLLPDPILRQQSLPVERVDAELEGFIDDMLETMYDAPGIGLAAIQVGVPRRLLVIDVAG 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ V +NP++ D + ++EGCLS P YA+V RP+++
Sbjct: 66 KDEPKSPQVFINPEVVATGDGISVYEEGCLSIPDYYADVERPETI 110
[188][TOP]
>UniRef100_A6CPT4 Peptide deformylase n=1 Tax=Bacillus sp. SG-1 RepID=A6CPT4_9BACI
Length = 161
Score = 82.8 bits (203), Expect = 2e-14
Identities = 42/107 (39%), Positives = 66/107 (61%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L IV YP+ IL + +++ FD+ L+ +D M+D M DG+GL+APQVG ++ + + +
Sbjct: 4 LPIVTYPNEILEIECRKVTEFDKKLRKFLDDMYDTMIAADGVGLAAPQVGKDIAVAIVDI 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E G I +VNP++ + + + EGCLSFP +Y EV RP+ V
Sbjct: 64 GDETG---TIEMVNPEVLEVRGEQIDL-EGCLSFPNLYGEVSRPEYV 106
[189][TOP]
>UniRef100_Q662U9 Peptide deformylase n=1 Tax=Borrelia garinii RepID=Q662U9_BORGA
Length = 186
Score = 82.4 bits (202), Expect = 2e-14
Identities = 40/107 (37%), Positives = 66/107 (61%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+++V YP+ +LR K K+ID D +++ M ++M + G+GL+APQVGL++ L V
Sbjct: 22 MEMVFYPNDLLRVKTKQIDNIDNKIRDYAKKMIELMDISGGVGLAAPQVGLDLSLFVVR- 80
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E + +V +NP I + S +L + EGCLS PG+Y ++RP +
Sbjct: 81 --ENRMARPLVFINPSITETSYELNSYKEGCLSIPGVYYNLMRPNGI 125
[190][TOP]
>UniRef100_Q2RP01 Peptide deformylase n=1 Tax=Rhodospirillum rubrum ATCC 11170
RepID=Q2RP01_RHORT
Length = 172
Score = 82.4 bits (202), Expect = 2e-14
Identities = 44/107 (41%), Positives = 64/107 (59%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+ PDP L K ++ D +++ L+D M + MY GIGL+APQVG+ +++V +P
Sbjct: 4 LPILTAPDPRLTKKALPVETVDVSIRKLMDDMLETMYLAPGIGLAAPQVGVLKRVIVLDP 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
A E + + L NP+I S+ P++EGCLS P Y VVRP V
Sbjct: 64 AREDEAPRPMRLANPEIIWSSEDTKPYEEGCLSVPEQYDTVVRPDRV 110
[191][TOP]
>UniRef100_A7Z4J2 Peptide deformylase n=1 Tax=Bacillus amyloliquefaciens FZB42
RepID=A7Z4J2_BACA2
Length = 160
Score = 82.4 bits (202), Expect = 2e-14
Identities = 45/106 (42%), Positives = 63/106 (59%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
KIV +P +L + +FD+ LK L+D M+D M + DG+GL+APQ+G+ + V +
Sbjct: 5 KIVTHPAEVLETPADEVTVFDKKLKKLLDDMYDTMLEMDGVGLAAPQIGILKRAAVVDIG 64
Query: 421 GEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E G I LVNP I + S + EGCLSFPG+Y +V RP V
Sbjct: 65 EESG---RIDLVNPVILEKSGEQTGV-EGCLSFPGVYGDVTRPDYV 106
[192][TOP]
>UniRef100_C7NDD2 Peptide deformylase n=1 Tax=Leptotrichia buccalis DSM 1135
RepID=C7NDD2_LEPBD
Length = 172
Score = 82.4 bits (202), Expect = 2e-14
Identities = 39/107 (36%), Positives = 68/107 (63%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+KIV Y P LR K++++D+ D+N++ +D M +M K +G+GL+A QV + + V
Sbjct: 1 MKIVLYGHPTLRQKSEKVDVVDDNVRETLDEMVALMRKANGVGLAANQVDIAKRFFVLE- 59
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+G ++NP+I ++SD++V +EGCLS PG++ +V RP +
Sbjct: 60 ----HDGVVKKVINPEILEFSDEIVDMEEGCLSIPGVFKKVNRPAKI 102
[193][TOP]
>UniRef100_C6RNP6 Peptide deformylase n=1 Tax=Acinetobacter radioresistens SK82
RepID=C6RNP6_ACIRA
Length = 176
Score = 82.4 bits (202), Expect = 2e-14
Identities = 42/107 (39%), Positives = 66/107 (61%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+ +PDP LR K ++ + ++ L MF+ MY+ GIGL+A QV ++QL+V +
Sbjct: 4 LPILSFPDPRLRTLAKPVEEVTDEIRQLAADMFETMYEAPGIGLAATQVDRHIQLIVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ E + + +V +NPKI ++ P++EGCLS P IY +V RP V
Sbjct: 64 SEE--KNQPMVFINPKITPLTEDTQPYEEGCLSVPQIYDKVERPSRV 108
[194][TOP]
>UniRef100_C0ANX4 Peptide deformylase n=1 Tax=Borrelia sp. SV1 RepID=C0ANX4_9SPIO
Length = 165
Score = 82.4 bits (202), Expect = 2e-14
Identities = 39/107 (36%), Positives = 70/107 (65%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+++V YP+ +LR K K+++ D+ +++ M ++M + G+GL+APQVGL++ L V
Sbjct: 1 MEMVFYPNDLLRVKTKQVENIDDKIRDYAKKMIELMDISGGVGLAAPQVGLDLALFVVR- 59
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E + +V +NP I + S +L + EGCLS PG+Y +++RP++V
Sbjct: 60 --ENKMARPLVFINPSIIETSYELSSYKEGCLSIPGVYYDLMRPKAV 104
[195][TOP]
>UniRef100_B9R1P6 Peptide deformylase n=1 Tax=Labrenzia alexandrii DFL-11
RepID=B9R1P6_9RHOB
Length = 189
Score = 82.4 bits (202), Expect = 2e-14
Identities = 46/121 (38%), Positives = 66/121 (54%)
Frame = +1
Query: 196 DKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSA 375
D+ A+ + V+ T I+ PDP+LR I+ D L D M + MY GIGL+A
Sbjct: 7 DRDAAISYVRRMTKRPIITIPDPVLREVCAPIEKVDAETIALADDMLETMYDAPGIGLAA 66
Query: 376 PQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQS 555
QVG+ ++ V + A E + +V +NP+I Y D+L + EGCLS P Y +V RP
Sbjct: 67 SQVGILKRIFVLDVAKEDAPKEPMVFINPEIIWYGDELSVYQEGCLSIPDYYEDVERPAE 126
Query: 556 V 558
V
Sbjct: 127 V 127
[196][TOP]
>UniRef100_B7XUK9 Peptide deformylase n=1 Tax=Borrelia garinii Far04
RepID=B7XUK9_BORGA
Length = 165
Score = 82.4 bits (202), Expect = 2e-14
Identities = 40/107 (37%), Positives = 68/107 (63%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+++V YP+ +LR K K+ID D +++ M ++M + G+GL+APQVGL++ L V
Sbjct: 1 MEMVFYPNDLLRVKTKQIDNIDNKIRDYAKKMIELMDISGGVGLAAPQVGLDLSLFVVR- 59
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E + +V +NP I + S +L + EGCLS PG+Y +++RP+ +
Sbjct: 60 --ENRMARPLVFINPSIIETSYELNSYREGCLSIPGVYYDLMRPKGI 104
[197][TOP]
>UniRef100_P96113 Peptide deformylase n=1 Tax=Thermotoga maritima RepID=DEF_THEMA
Length = 164
Score = 82.4 bits (202), Expect = 2e-14
Identities = 39/106 (36%), Positives = 64/106 (60%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
+I + DP+LR + K + FDENLK ++ M + MY DG+GL+APQVG++ + V +
Sbjct: 3 RIRVFGDPVLRKRAKPVTKFDENLKKTIERMIETMYHYDGVGLAAPQVGISQRFFVMDVG 62
Query: 421 GEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
P + ++NP+I + + +EGCLSFP I+ E+ R + +
Sbjct: 63 NGP-----VAVINPEILEIDPETEVAEEGCLSFPEIFVEIERSKRI 103
[198][TOP]
>UniRef100_A5GQU9 Peptide deformylase n=1 Tax=Synechococcus sp. RCC307
RepID=DEF_SYNR3
Length = 201
Score = 82.4 bits (202), Expect = 2e-14
Identities = 52/131 (39%), Positives = 72/131 (54%), Gaps = 5/131 (3%)
Frame = +1
Query: 181 VSRKDDKVASATDV-----QFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVM 345
++R+ ++ AS V Q E+P KI LR KRI +E ++ L M M
Sbjct: 8 MARQSERQASTVMVPKGEEQPESP-KIHTLGSNELRKPAKRISKVNEQVRELAREMLRSM 66
Query: 346 YKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPG 525
Y GIGL+APQVG++ QL+V + E +VL+NP+I S L ++EGCLS PG
Sbjct: 67 YAAHGIGLAAPQVGVHQQLLVIDLDPEEAANPPLVLINPEIVATSGALDTYEEGCLSIPG 126
Query: 526 IYAEVVRPQSV 558
+Y VVRP V
Sbjct: 127 VYLNVVRPSQV 137
[199][TOP]
>UniRef100_O05100 Peptide deformylase 1 n=1 Tax=Clostridium acetobutylicum
RepID=DEF1_CLOAB
Length = 150
Score = 82.4 bits (202), Expect = 2e-14
Identities = 47/105 (44%), Positives = 67/105 (63%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
I +Y D +LR K+++++ D+ L L+D MF+ MY DG+GL+APQVG+ +L+V
Sbjct: 6 IRKYGDELLRKKSRKVEKIDKRLLTLIDDMFETMYNADGVGLAAPQVGILKRLVVI---- 61
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ GEG +VL+NP+I + S K V EGCLS P EV RP V
Sbjct: 62 DVGEG-PVVLINPEILETSGKAVDV-EGCLSIPERQGEVERPTYV 104
[200][TOP]
>UniRef100_UPI00003849EF COG0242: N-formylmethionyl-tRNA deformylase n=1
Tax=Magnetospirillum magnetotacticum MS-1
RepID=UPI00003849EF
Length = 170
Score = 82.0 bits (201), Expect = 3e-14
Identities = 42/107 (39%), Positives = 68/107 (63%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+ PDP+L++K+K + D+ ++ L+ M + MY GIGL+APQ+G+ +++V +
Sbjct: 4 LPILTAPDPVLKSKSKPVAAVDDRIRALLADMLETMYHAPGIGLAAPQIGVLERVIVMDI 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + I +VNP+I SD+ ++EGCLS P Y+ VVRP SV
Sbjct: 64 GRKEEDRAPIRMVNPEIIWASDEDNTYEEGCLSVPEHYSNVVRPASV 110
[201][TOP]
>UniRef100_A6C970 Peptide deformylase n=1 Tax=Planctomyces maris DSM 8797
RepID=A6C970_9PLAN
Length = 196
Score = 82.0 bits (201), Expect = 3e-14
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L+IV YP P LR K+K + L+++V MFD+MY+ GIGL+A QV L +L V N
Sbjct: 4 LQIVNYPHPALRWKSKPVKSITPELRDIVRNMFDLMYEARGIGLAANQVALPYRLFVINL 63
Query: 418 AGEPGE-GKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+P E +E V +NP+I K +EGCLS P +Y +V R + +
Sbjct: 64 TSDPNEPEEEFVFINPEITKRKG-TAEGEEGCLSLPQVYGDVKRSEEI 110
[202][TOP]
>UniRef100_A3JIK0 Peptide deformylase n=1 Tax=Marinobacter sp. ELB17
RepID=A3JIK0_9ALTE
Length = 167
Score = 82.0 bits (201), Expect = 3e-14
Identities = 44/103 (42%), Positives = 60/103 (58%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+EYPDP LR K + + ++ L+D MF+ MY GIGL+A QV ++ Q++V +
Sbjct: 3 LNILEYPDPRLRTLAKPVTTVTDEIRTLIDDMFETMYDAAGIGLAASQVNVHQQIVVMDL 62
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVR 546
+ + E K V +NPKI L EGCLS PG Y EV R
Sbjct: 63 SEDNSEPK--VFINPKIGILDGDLEAMQEGCLSVPGFYEEVER 103
[203][TOP]
>UniRef100_UPI00019B6ECA peptide deformylase n=1 Tax=Eggerthella lenta DSM 2243
RepID=UPI00019B6ECA
Length = 182
Score = 81.6 bits (200), Expect = 4e-14
Identities = 46/106 (43%), Positives = 60/106 (56%)
Frame = +1
Query: 232 TPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVF 411
T + IV+ P+PIL D+ D++LK L M MYK DG GL+APQ+G+ +L+V
Sbjct: 2 TVISIVQSPNPILNQVCDPCDLGDKSLKKLAKQMAKAMYKNDGCGLAAPQLGVAKRLVVI 61
Query: 412 NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRP 549
+ E GE IVLVNP + V EGCLS PGI + RP
Sbjct: 62 DCDQEEGEQNPIVLVNPVLVDTQGDPVVAGEGCLSCPGITVPIARP 107
[204][TOP]
>UniRef100_UPI00016B26E1 peptide deformylase n=1 Tax=Borrelia valaisiana VS116
RepID=UPI00016B26E1
Length = 165
Score = 81.6 bits (200), Expect = 4e-14
Identities = 39/107 (36%), Positives = 70/107 (65%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+++V YP+ +LR K K+I+ D+ +++ M ++M + G+GL+APQVGL++ L V
Sbjct: 1 MEMVFYPNDLLRVKTKQINNIDDKIRDYAKKMIELMDISGGVGLAAPQVGLDLSLFVVR- 59
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E + +V +NP I + S +L + EGCLS PG+Y +++RP+++
Sbjct: 60 --ENKMARPLVFINPLITETSYELNSYREGCLSIPGVYYDLMRPKAI 104
[205][TOP]
>UniRef100_C8WHT7 Peptide deformylase n=1 Tax=Eggerthella lenta DSM 2243
RepID=C8WHT7_9ACTN
Length = 183
Score = 81.6 bits (200), Expect = 4e-14
Identities = 46/106 (43%), Positives = 60/106 (56%)
Frame = +1
Query: 232 TPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVF 411
T + IV+ P+PIL D+ D++LK L M MYK DG GL+APQ+G+ +L+V
Sbjct: 3 TVISIVQSPNPILNQVCDPCDLGDKSLKKLAKQMAKAMYKNDGCGLAAPQLGVAKRLVVI 62
Query: 412 NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRP 549
+ E GE IVLVNP + V EGCLS PGI + RP
Sbjct: 63 DCDQEEGEQNPIVLVNPVLVDTQGDPVVAGEGCLSCPGITVPIARP 108
[206][TOP]
>UniRef100_C8SJ02 Peptide deformylase n=1 Tax=Mesorhizobium opportunistum WSM2075
RepID=C8SJ02_9RHIZ
Length = 176
Score = 81.6 bits (200), Expect = 4e-14
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Frame = +1
Query: 235 PLK-IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVF 411
P+K ++ PDPILR +K ++ D L+ L D M MY GIGL+A Q+G ++++V
Sbjct: 2 PIKPLIILPDPILRQVSKPVERVDAPLRGLADDMLATMYDAPGIGLAAIQIGEPLRMLVI 61
Query: 412 NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ A E V +NP+I + +D ++EGCLS P YAEV RP SV
Sbjct: 62 DLAKEDETPAPHVFINPEILESADARSVYEEGCLSIPDYYAEVERPASV 110
[207][TOP]
>UniRef100_C3API5 Peptide deformylase n=3 Tax=Bacillus RepID=C3API5_BACMY
Length = 158
Score = 81.6 bits (200), Expect = 4e-14
Identities = 45/108 (41%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L+IV++PD +L +R+ FD+ L NL+ M + M DG+GL+APQVG+++Q+ V +
Sbjct: 4 LEIVKHPDEVLETPCERVMNFDKKLVNLLKDMHETMLVADGVGLAAPQVGVSLQVAVVDI 63
Query: 418 AGEPGEGKEIVLVNPKI-KKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ G +I L+NP I +K +++ P EGCLSFPG+Y EV R + +
Sbjct: 64 GDDTG---KIELINPVILEKRGEQVGP--EGCLSFPGLYGEVERAEYI 106
[208][TOP]
>UniRef100_B1X553 Peptide deformylase n=1 Tax=Paulinella chromatophora
RepID=B1X553_PAUCH
Length = 201
Score = 81.6 bits (200), Expect = 4e-14
Identities = 47/137 (34%), Positives = 74/137 (54%)
Frame = +1
Query: 148 LTSSVRAEVKRVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVD 327
+TSS + ++ V + ++ L+I + LR KRI +E ++++
Sbjct: 1 MTSSFAQLARTTEIRNQSVMVKKKIWKDSILEIHKLGSDKLRTSAKRIMRINEEVRDIAR 60
Query: 328 AMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEG 507
M MY GIGL+APQVG+N QL+V + E I+L+NP+I + L ++EG
Sbjct: 61 DMLRSMYAAKGIGLAAPQVGINKQLIVIDIDLENSTTPPIILINPEIIASNASLNTYEEG 120
Query: 508 CLSFPGIYAEVVRPQSV 558
CLS PG+Y +VVRP +
Sbjct: 121 CLSIPGVYLDVVRPSII 137
[209][TOP]
>UniRef100_Q7U9D4 Peptide deformylase n=1 Tax=Synechococcus sp. WH 8102
RepID=DEF_SYNPX
Length = 201
Score = 81.6 bits (200), Expect = 4e-14
Identities = 47/132 (35%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Frame = +1
Query: 166 AEVKRVSRKDDKVASATDVQFETP-LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDV 342
A++ R + + ETP L+I +LR +RI E + L M
Sbjct: 6 AQLARAAEQSRDTMLVPKTALETPPLEIHTLGAEVLRQSARRIGKVTEQTRELARDMLRS 65
Query: 343 MYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFP 522
MY GIGL+APQVG++ QL+V + E +VL+NP+I S + ++EGCLS P
Sbjct: 66 MYTAKGIGLAAPQVGIHQQLLVIDLDLENAATPPLVLINPEISAASASIDTYEEGCLSIP 125
Query: 523 GIYAEVVRPQSV 558
G+Y +VVRP ++
Sbjct: 126 GVYLDVVRPTAI 137
[210][TOP]
>UniRef100_Q28V79 Peptide deformylase n=1 Tax=Jannaschia sp. CCS1 RepID=Q28V79_JANSC
Length = 174
Score = 81.3 bits (199), Expect = 5e-14
Identities = 42/108 (38%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN- 414
L I+ +PDP L+ + + L+ L D M MY GIGL+APQVG+ +L+V +
Sbjct: 3 LPILIHPDPRLKKVAAPVPDVTDELRALADNMLSTMYDAPGIGLAAPQVGVGQRLIVLDC 62
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
G+ + + + NP++ SD++ +DEGCLS P IYA+V RP++V
Sbjct: 63 EKGDDVTPRPLAMFNPEVIASSDEMNTYDEGCLSIPDIYADVTRPEAV 110
[211][TOP]
>UniRef100_A8FD37 Peptide deformylase n=1 Tax=Bacillus pumilus SAFR-032
RepID=A8FD37_BACP2
Length = 160
Score = 81.3 bits (199), Expect = 5e-14
Identities = 43/105 (40%), Positives = 63/105 (60%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
IV +P +L K + +D FD+ LK L+D M+D M + DG+GL+APQ+G++ ++ V +
Sbjct: 6 IVIHPAEVLEQKAESVDTFDKKLKKLLDDMYDTMLELDGVGLAAPQIGISQRIAVVDIGE 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E G I LVNP++ + EGCLSFP +Y V RP V
Sbjct: 66 ESG---RIDLVNPEVLEVKGSQTDI-EGCLSFPSLYGTVERPSYV 106
[212][TOP]
>UniRef100_A2SCF6 Peptide deformylase n=1 Tax=Methylibium petroleiphilum PM1
RepID=A2SCF6_METPP
Length = 170
Score = 81.3 bits (199), Expect = 5e-14
Identities = 43/107 (40%), Positives = 66/107 (61%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+ YPDP L K + DE ++ LVD M + MY G+GL+A QV ++ +++V +
Sbjct: 4 LDILRYPDPRLHTVAKPVKEVDERVRQLVDDMLETMYDAQGVGLAATQVDVHERVIVIDV 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E + VL+NP++ + SD++V DEGCLS P IY +V R V
Sbjct: 64 SDDRNEPR--VLINPELLQVSDEMVVGDEGCLSVPQIYDKVPRHAKV 108
[213][TOP]
>UniRef100_Q2BQD4 Peptide deformylase n=1 Tax=Neptuniibacter caesariensis
RepID=Q2BQD4_9GAMM
Length = 171
Score = 81.3 bits (199), Expect = 5e-14
Identities = 39/107 (36%), Positives = 65/107 (60%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+EYPDP LR + + + ++ +D MF+ MY GIGL+A QV ++ +++ +
Sbjct: 4 LTILEYPDPRLRTIAEPVSEVTDEIRAQIDDMFETMYAAPGIGLAATQVNIHKRIVTMDI 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E +VL+NP+ + ++L + EGCLS PG Y +V RPQ +
Sbjct: 64 SDDQNE--PLVLINPEFEVIDEELHKYQEGCLSVPGFYEDVKRPQKI 108
[214][TOP]
>UniRef100_C0ALM2 Peptide deformylase n=1 Tax=Borrelia burgdorferi 94a
RepID=C0ALM2_BORBU
Length = 165
Score = 81.3 bits (199), Expect = 5e-14
Identities = 39/107 (36%), Positives = 69/107 (64%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+++V YP+ +LR K K+I+ D+ +++ M ++M + G+GL+APQVGL++ L V
Sbjct: 1 MEMVFYPNDLLRVKTKQIENIDDKIRDYAKKMIELMDISGGVGLAAPQVGLDLALFVVR- 59
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E + +V +NP I + S + + EGCLS PG+Y +++RP++V
Sbjct: 60 --ENKMARPLVFINPSIIETSYEFSSYKEGCLSIPGVYYDLMRPKAV 104
[215][TOP]
>UniRef100_B9AA56 Peptide deformylase n=2 Tax=Borrelia burgdorferi RepID=B9AA56_BORBU
Length = 165
Score = 81.3 bits (199), Expect = 5e-14
Identities = 39/107 (36%), Positives = 69/107 (64%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+++V YP+ +LR K K+I+ D+ +++ M ++M + G+GL+APQVGL++ L V
Sbjct: 1 MEMVFYPNDLLRVKTKQIENIDDKIRDYAKKMIELMDISGGVGLAAPQVGLDLALFVVR- 59
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E + +V +NP I + S + + EGCLS PG+Y +++RP++V
Sbjct: 60 --ENKMARPLVFINPSIIETSYEFSSYKEGCLSIPGVYYDLMRPKAV 104
[216][TOP]
>UniRef100_A3EQQ7 Peptide deformylase n=1 Tax=Leptospirillum rubarum
RepID=A3EQQ7_9BACT
Length = 177
Score = 81.3 bits (199), Expect = 5e-14
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVF- 411
P I+ Y DP L K+ + D+ + + V MF+++Y+ GIG++APQVG N++ VF
Sbjct: 3 PAGILSYGDPRLLIKSTEVTRIDQEMSDFVRGMFELLYRVPGIGIAAPQVGCNMRFFVFD 62
Query: 412 -NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVR 546
N +PG + ++NP I + + +EGCLSFPGI+ V R
Sbjct: 63 MNRRADPGSRTPVTMINPVISA-KEGAITQEEGCLSFPGIFVPVER 107
[217][TOP]
>UniRef100_B1LB14 Peptide deformylase n=2 Tax=Thermotoga RepID=DEF_THESQ
Length = 164
Score = 81.3 bits (199), Expect = 5e-14
Identities = 38/106 (35%), Positives = 64/106 (60%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
+I + DP+LR + K + FD+NLK ++ M + MY DG+GL+APQVG++ + V +
Sbjct: 3 RIRVFGDPVLRKRAKPVTKFDDNLKKTIERMIETMYHYDGVGLAAPQVGISQRFFVMDVG 62
Query: 421 GEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
P + ++NP+I + + +EGCLSFP I+ E+ R + +
Sbjct: 63 NGP-----VAVINPEILEIDPETEVAEEGCLSFPEIFVEIERSKRI 103
[218][TOP]
>UniRef100_O51092 Peptide deformylase n=1 Tax=Borrelia burgdorferi RepID=DEF_BORBU
Length = 172
Score = 81.3 bits (199), Expect = 5e-14
Identities = 39/107 (36%), Positives = 69/107 (64%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+++V YP+ +LR K K+I+ D+ +++ M ++M + G+GL+APQVGL++ L V
Sbjct: 8 MEMVFYPNDLLRVKTKQIENIDDKIRDYAKKMIELMDISGGVGLAAPQVGLDLALFVVR- 66
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E + +V +NP I + S + + EGCLS PG+Y +++RP++V
Sbjct: 67 --ENKMARPLVFINPSIIETSYEFSSYKEGCLSIPGVYYDLMRPKAV 111
[219][TOP]
>UniRef100_Q73M64 Peptide deformylase n=1 Tax=Treponema denticola RepID=Q73M64_TREDE
Length = 169
Score = 80.9 bits (198), Expect = 6e-14
Identities = 41/107 (38%), Positives = 68/107 (63%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+K++ + LR +K ++ DEN+K+L+D MF + K +GIGL+APQVG N++L +
Sbjct: 1 MKVLYLGEETLREVSKPVEKIDENIKSLIDEMFVTVKKENGIGLAAPQVGENIRLFIVFI 60
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
++ V +NP+I + S ++ +EGCLS P +Y EV+RP +V
Sbjct: 61 -----NEQKYVFINPEIIETSQEMCLMEEGCLSIPKVYDEVMRPSAV 102
[220][TOP]
>UniRef100_C6XQ44 Peptide deformylase n=1 Tax=Hirschia baltica ATCC 49814
RepID=C6XQ44_HIRBI
Length = 181
Score = 80.9 bits (198), Expect = 6e-14
Identities = 40/105 (38%), Positives = 64/105 (60%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
I+ P+P+L+ +K +D + ++ L+D M + MY GIGL+A Q+G V+++V + A
Sbjct: 6 ILTVPNPLLKEVSKPVDAVTDEIRALMDDMLETMYDAPGIGLAAIQIGEPVRVIVMDIAD 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ E VNP+I + + VP+DEGCLS P IY + RP+ V
Sbjct: 66 KDEEPNPQYFVNPEILEKVEATVPYDEGCLSVPEIYETIERPERV 110
[221][TOP]
>UniRef100_C1DV92 Peptide deformylase n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1
RepID=C1DV92_SULAA
Length = 179
Score = 80.9 bits (198), Expect = 6e-14
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 7/113 (6%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
+I +PD IL+ K ID FD+ LK +D M++ MYK +G+GL+A Q+G+ Q++V + +
Sbjct: 4 RIRTWPDKILKEPTKEIDFFDDRLKEYIDKMWEFMYKEEGVGLAANQIGIPYQILVIDTS 63
Query: 421 GEPGEGKE-------IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ +E +VL+NPKI + +++ EGCLSFPG+ + R + V
Sbjct: 64 IREKKNEEETEPPVKMVLINPKIVEKEGQVMS-TEGCLSFPGVQITIPRYKRV 115
[222][TOP]
>UniRef100_C7MNL2 Peptide deformylase n=1 Tax=Cryptobacterium curtum DSM 15641
RepID=C7MNL2_CRYCD
Length = 175
Score = 80.9 bits (198), Expect = 6e-14
Identities = 44/103 (42%), Positives = 63/103 (61%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
++IV PDPILR + + DI DE+LK+L M + MY+ +G GL+APQVG+ +L+V +
Sbjct: 1 MRIVLSPDPILRQRAEEADIADESLKSLAQQMAETMYENNGCGLAAPQVGVLKRLIVIDC 60
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVR 546
E E I L+NP I + + + EGCLS PGI + R
Sbjct: 61 DTESEERNPITLINPVILETAGEWETEGEGCLSVPGITVPIRR 103
[223][TOP]
>UniRef100_C3WCB3 Peptide deformylase n=1 Tax=Fusobacterium mortiferum ATCC 9817
RepID=C3WCB3_FUSMR
Length = 169
Score = 80.9 bits (198), Expect = 6e-14
Identities = 38/106 (35%), Positives = 67/106 (63%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
+I +Y + +LR + ++ D + ++D M + M++ G+GL+APQVG++ ++ V
Sbjct: 4 EIKKYGEAVLREVAQEVENIDNEILEILDNMVETMHEAKGVGLAAPQVGISKRMFVC--- 60
Query: 421 GEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ G+G ++NP I +DKL+ F+EGCLS PGIY +V RP+ +
Sbjct: 61 -DQGDGVVRKVINPIITPMTDKLMDFEEGCLSVPGIYKKVQRPEKI 105
[224][TOP]
>UniRef100_B6GC44 Peptide deformylase n=1 Tax=Collinsella stercoris DSM 13279
RepID=B6GC44_9ACTN
Length = 178
Score = 80.9 bits (198), Expect = 6e-14
Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
IV PDP LR + ++ + L LV+ M D M++ G GL+APQVG +QL + +
Sbjct: 6 IVLSPDPRLRQECAEVEEINGELIELVERMKDQMFENGGCGLAAPQVGQTIQLAIIDTEY 65
Query: 424 EPGEGKE-IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + VL+NP I + SD LVP EGCLS PGI E++RP V
Sbjct: 66 SSKKDYDPYVLINPVIVEQSDNLVPSSEGCLSIPGINCEILRPDHV 111
[225][TOP]
>UniRef100_A6EY67 Peptide deformylase n=1 Tax=Marinobacter algicola DG893
RepID=A6EY67_9ALTE
Length = 167
Score = 80.9 bits (198), Expect = 6e-14
Identities = 41/103 (39%), Positives = 62/103 (60%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+EYPDP LR K +D + + L+D MF+ MY GIGL+A QV ++ Q++V +
Sbjct: 3 LDILEYPDPRLRTIAKPVDEVTDETRKLIDDMFETMYDAPGIGLAATQVNVHKQIIVMDL 62
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVR 546
+ + E + V +NP+++ +L EGCLS PG Y +V R
Sbjct: 63 SEDKSEPR--VFINPEVEVLEGELEEMQEGCLSVPGFYEDVSR 103
[226][TOP]
>UniRef100_B2A2K1 Peptide deformylase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF
RepID=DEF_NATTJ
Length = 156
Score = 80.9 bits (198), Expect = 6e-14
Identities = 42/106 (39%), Positives = 65/106 (61%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
KI DP+L+ K K++ D+ L+ L+ M D MY+ +GIGL+APQ+G++ +++V
Sbjct: 5 KIRTNDDPVLKRKAKKVTNIDDRLERLLTNMLDTMYEAEGIGLAAPQIGISKRVIVV--- 61
Query: 421 GEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ GE + L+NP+I SD+ EGCLS+PG+ V RP V
Sbjct: 62 -DIGEDEIYQLINPEIVDTSDEQEKALEGCLSYPGLQGRVTRPVKV 106
[227][TOP]
>UniRef100_Q6G5F0 Peptide deformylase n=1 Tax=Bartonella henselae RepID=DEF_BARHE
Length = 176
Score = 80.9 bits (198), Expect = 6e-14
Identities = 40/106 (37%), Positives = 66/106 (62%)
Frame = +1
Query: 235 PLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 414
PL IV PDPILR +K ++ D ++ L D M + MY G+GL+A Q+G+ ++++V +
Sbjct: 5 PLVIV--PDPILREISKPVEYIDSAVQKLADDMLETMYHAQGVGLAAIQIGIPLRMLVLD 62
Query: 415 PAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQ 552
+ + +V++NP++ SD+ + EGCLS P +AEV RP+
Sbjct: 63 VSRNDEQKNPLVIINPEVLWLSDERNIYKEGCLSIPEYFAEVERPK 108
[228][TOP]
>UniRef100_UPI0001850D62 peptide deformylase n=1 Tax=Bacillus coahuilensis m4-4
RepID=UPI0001850D62
Length = 161
Score = 80.5 bits (197), Expect = 8e-14
Identities = 42/107 (39%), Positives = 68/107 (63%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L IV +P+ +L + KR+ IFD+ L+ L+D M+D M + DG+GL+APQ+G ++ + + +
Sbjct: 4 LPIVFHPNEVLEKECKRVTIFDKKLRKLLDNMYDTMIEADGVGLAAPQIGQDISVAIVDI 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ G I LVNP+I + ++ + EGCLSFP +Y + RP V
Sbjct: 64 GDDSG---IIELVNPEILE-TNGIETDIEGCLSFPNLYGTLTRPAYV 106
[229][TOP]
>UniRef100_C3KE48 Peptide deformylase n=1 Tax=Pseudomonas fluorescens SBW25
RepID=C3KE48_PSEFS
Length = 168
Score = 80.5 bits (197), Expect = 8e-14
Identities = 40/107 (37%), Positives = 67/107 (62%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PD LR K + + D+ ++ LVD MF+ MY+ GIGL+A QV ++++++V +
Sbjct: 4 LNILEFPDSRLRTIAKPVAVVDDKVRQLVDDMFETMYEAPGIGLAATQVNVHLRVVVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E + V +NP+ + +D++ + EGCLS P Y V RP V
Sbjct: 64 SEDRSEPR--VYINPEFEPLTDEMGEYQEGCLSVPEFYENVERPLRV 108
[230][TOP]
>UniRef100_C5ZVT6 Peptide deformylase n=1 Tax=Helicobacter canadensis MIT 98-5491
RepID=C5ZVT6_9HELI
Length = 168
Score = 80.5 bits (197), Expect = 8e-14
Identities = 42/110 (38%), Positives = 75/110 (68%), Gaps = 3/110 (2%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQ-LMVFN 414
L+++ YP+PILR ++ I++F+E+L L+D+M++VM + +G+G+SA QV ++ L++
Sbjct: 2 LEVITYPNPILRQISQPIEVFNESLHELLDSMYEVMLQKNGVGISAIQVAKPIRALLICL 61
Query: 415 PAGEPGEGKE--IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
P E + KE + ++NP+I + +++ F+EGCLS P Y EV R S+
Sbjct: 62 PDEEGNQHKEDLLEIINPQILEKDGEII-FNEGCLSVPEFYEEVKRASSL 110
[231][TOP]
>UniRef100_C9RZP6 Peptide deformylase n=2 Tax=Geobacillus RepID=C9RZP6_9BACI
Length = 157
Score = 80.5 bits (197), Expect = 8e-14
Identities = 45/107 (42%), Positives = 62/107 (57%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L IV YPDPIL + FD L L+D M++ M DG+GL+APQ+G+ Q+ V +
Sbjct: 4 LPIVTYPDPILEQPCAPVTAFDRRLGRLLDDMYETMLAADGVGLAAPQIGVAEQIAVIDV 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E G I L+NP + + + V EGCLSFPG++ EV R + V
Sbjct: 64 GDEHG---RIELINPVVIEARGEQVDV-EGCLSFPGLFGEVPRAKFV 106
[232][TOP]
>UniRef100_C2HH24 Peptide deformylase n=1 Tax=Finegoldia magna ATCC 53516
RepID=C2HH24_PEPMA
Length = 162
Score = 80.5 bits (197), Expect = 8e-14
Identities = 43/100 (43%), Positives = 64/100 (64%)
Frame = +1
Query: 259 DPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEG 438
DPILR K++ + D+ +K +VD MF+ MY+ GIGL+ QVG+ +++V + E G
Sbjct: 11 DPILRKKSREVKKIDDRIKQIVDDMFETMYENKGIGLACVQVGMLKRIVVIDMQDEDG-- 68
Query: 439 KEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
++VL+NPKI + SD+ EGCLS PG V RP++V
Sbjct: 69 -KMVLINPKIVERSDEKQINVEGCLSVPGKNGYVERPKTV 107
[233][TOP]
>UniRef100_B9NS18 Peptide deformylase n=1 Tax=Rhodobacteraceae bacterium KLH11
RepID=B9NS18_9RHOB
Length = 172
Score = 80.5 bits (197), Expect = 8e-14
Identities = 42/106 (39%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
I+ +PDP L+ + ++L+ L D M + MY GIGL+APQ+G+ +L+V +
Sbjct: 5 ILIHPDPRLKKVCAPVADITDDLRKLADDMLETMYDAPGIGLAAPQIGVLDRLIVVDCVK 64
Query: 424 EPGE-GKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E GE + +V+ NP++ SD++ ++EGCLS P YAEV RP++V
Sbjct: 65 EEGETPRPLVMFNPQVIASSDEINVYEEGCLSIPDQYAEVTRPRTV 110
[234][TOP]
>UniRef100_B8KUG1 Peptide deformylase n=1 Tax=gamma proteobacterium NOR51-B
RepID=B8KUG1_9GAMM
Length = 168
Score = 80.5 bits (197), Expect = 8e-14
Identities = 40/107 (37%), Positives = 64/107 (59%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+E+PDP LR + K + D+ ++ L+D M + MY GIGL+A QV ++ +++V +
Sbjct: 4 LPILEFPDPRLRTRAKPVTEVDQRIRRLIDDMLETMYDAPGIGLAASQVDVHERVIVIDV 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ E + V +NP++ L +DEGCLS PG + V RP S+
Sbjct: 64 SENRDEPR--VFINPEVTVIDKTLGSYDEGCLSVPGFFETVNRPSSI 108
[235][TOP]
>UniRef100_A4IM46 Peptide deformylase n=2 Tax=Geobacillus RepID=A4IM46_GEOTN
Length = 157
Score = 80.5 bits (197), Expect = 8e-14
Identities = 45/107 (42%), Positives = 62/107 (57%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L IV YP P+L R+ +FD L L+D M++ M DG+GL+APQVG+ Q+ V +
Sbjct: 4 LPIVTYPAPVLEQPCARVTVFDRQLGRLLDDMYETMIAADGVGLAAPQVGIAKQVAVVDI 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E G I L+NP I + + + EGCLSFPG++ EV R V
Sbjct: 64 GDEHG---RIELINPVIIEARGEQIDV-EGCLSFPGLFGEVPRANYV 106
[236][TOP]
>UniRef100_A8F524 Peptide deformylase n=1 Tax=Thermotoga lettingae TMO
RepID=DEF_THELT
Length = 171
Score = 80.5 bits (197), Expect = 8e-14
Identities = 39/100 (39%), Positives = 65/100 (65%)
Frame = +1
Query: 259 DPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEG 438
DP+LR K+K ++ DE +L+ +F+ MY TDGIGL+APQ+G+++++ V + +G
Sbjct: 10 DPVLRKKSKNVERVDETTISLIKDLFETMYATDGIGLAAPQIGVSLRIFVMD------DG 63
Query: 439 KEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
K V +NP+I S++ +EGCLS P ++ +V R + V
Sbjct: 64 KPRVFINPEIIYKSEEKEIAEEGCLSVPEVFEDVERSKEV 103
[237][TOP]
>UniRef100_Q8KCG7 Peptide deformylase n=1 Tax=Chlorobaculum tepidum RepID=DEF_CHLTE
Length = 187
Score = 80.5 bits (197), Expect = 8e-14
Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMV--F 411
L I Y DP+L K K + D ++ L+ MFD MYK GIGL+APQVG +++L+V
Sbjct: 3 LPINTYSDPVLAMKAKPLKGVDSAIEELIAEMFDTMYKAPGIGLAAPQVGHSLRLVVVDI 62
Query: 412 NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ E + K +V++NP+I + + +EGCLS PGI VVRP ++
Sbjct: 63 STIKEYADFKPMVVINPRIVAVRGRSL-MEEGCLSVPGIAGNVVRPSAI 110
[238][TOP]
>UniRef100_UPI000197B0DF hypothetical protein BACCOPRO_00465 n=1 Tax=Bacteroides coprophilus
DSM 18228 RepID=UPI000197B0DF
Length = 184
Score = 80.1 bits (196), Expect = 1e-13
Identities = 45/112 (40%), Positives = 67/112 (59%), Gaps = 5/112 (4%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFN- 414
L I Y P+LR + + I NLK L+ MF+ M + DG+GL+APQVGL ++++V N
Sbjct: 3 LPIYVYGQPVLRQEAEDITPDYPNLKELIQNMFETMDRADGVGLAAPQVGLPIRVVVVNL 62
Query: 415 --PAGEPGEGKEI--VLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E K+ V +NP I + D++V +EGCLS PGI+ V RP +
Sbjct: 63 DVLSDDMPEFKDFKRVYINPHILETGDEMVSMEEGCLSLPGIHESVKRPDRI 114
[239][TOP]
>UniRef100_B2UN70 Peptide deformylase n=1 Tax=Akkermansia muciniphila ATCC BAA-835
RepID=B2UN70_AKKM8
Length = 182
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/122 (38%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L+I +Y +P+L+ K + ++ FD++LK L + M + MY +GIGL+APQV + +QL+V +
Sbjct: 3 LEIAQYGNPVLKEKCRPVEHFDDSLKTLAENMLETMYAAEGIGLAAPQVSIPIQLVVIDI 62
Query: 418 AGEP---------GEGKE------IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQ 552
E GE KE ++ NP ++ Y + PF EGCLS I A VVRP
Sbjct: 63 PKEEESVTWLKVNGEDKELSDIMPLMFANPVLEPYG-PMHPFHEGCLSVMKIRASVVRPD 121
Query: 553 SV 558
V
Sbjct: 122 FV 123
[240][TOP]
>UniRef100_A1TWN1 Peptide deformylase n=1 Tax=Marinobacter aquaeolei VT8
RepID=A1TWN1_MARAV
Length = 167
Score = 80.1 bits (196), Expect = 1e-13
Identities = 40/102 (39%), Positives = 64/102 (62%)
Frame = +1
Query: 241 KIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPA 420
+I+EYPDP LR K ++ ++++ L+D MF+ MY GIGL+A QV ++ Q++V + +
Sbjct: 4 EILEYPDPRLRTIAKPVEEVTDDIRTLIDDMFETMYDARGIGLAATQVDVHKQIIVMDLS 63
Query: 421 GEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVR 546
+ E + V +NPK++ +L EGCLS PG Y +V R
Sbjct: 64 EDKTEPR--VFINPKVEVLDGELEAMQEGCLSVPGFYEDVKR 103
[241][TOP]
>UniRef100_D0C584 Peptide deformylase 1 n=1 Tax=Acinetobacter sp. RUH2624
RepID=D0C584_9GAMM
Length = 176
Score = 80.1 bits (196), Expect = 1e-13
Identities = 42/107 (39%), Positives = 64/107 (59%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+ +PDP LR K ++ + ++ L MF+ MY GIGL+A QV ++QL+V +
Sbjct: 4 LPILSFPDPRLRTIAKPVEEVTDEIRQLAADMFETMYAAPGIGLAASQVDRHIQLIVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ E +V +NPKI +++ P++EGCLS P IY +V RP V
Sbjct: 64 SESKDE--PMVFINPKITPLTEETQPYEEGCLSVPQIYDKVDRPSRV 108
[242][TOP]
>UniRef100_C9MYJ2 Putative uncharacterized protein n=1 Tax=Leptotrichia hofstadii
F0254 RepID=C9MYJ2_9FUSO
Length = 171
Score = 80.1 bits (196), Expect = 1e-13
Identities = 40/107 (37%), Positives = 66/107 (61%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+KIV Y P LR K++++D D++L+ +D M +M K +G+GL+A QV + + V
Sbjct: 1 MKIVLYGHPTLREKSEKVDAVDDSLRETLDEMVALMRKANGVGLAANQVDIAKRFFVLE- 59
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
EG ++NP+I ++S+++ +EGCLS PGIY +V RP +
Sbjct: 60 ----HEGVVKKVINPEILEFSEEIADMEEGCLSIPGIYKKVNRPAKI 102
[243][TOP]
>UniRef100_C2G1W6 Peptide deformylase n=1 Tax=Sphingobacterium spiritivorum ATCC
33300 RepID=C2G1W6_9SPHI
Length = 192
Score = 80.1 bits (196), Expect = 1e-13
Identities = 46/115 (40%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L IV Y DP+LR K + ID +K L+ M+D MY G+GL+APQ+GL +++ V +
Sbjct: 3 LPIVAYGDPVLRKKTQEIDEDYPEIKELIANMYDTMYAAHGVGLAAPQIGLAIRVFVIDA 62
Query: 418 ---AGEPGEGKEI-----VLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
A + E K + V +NP I + + + F+EGCLS P I EV RP +V
Sbjct: 63 SPFAEDDDEDKSLKDFKKVFINPIIVEETGEKWGFNEGCLSIPDINEEVFRPANV 117
[244][TOP]
>UniRef100_B9K7G9 Peptide deformylase n=1 Tax=Thermotoga neapolitana DSM 4359
RepID=DEF_THENN
Length = 164
Score = 80.1 bits (196), Expect = 1e-13
Identities = 39/102 (38%), Positives = 62/102 (60%)
Frame = +1
Query: 253 YPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPG 432
+ DP+LR + K + FDE LK ++ M + MY DG+GL+APQVG++ + V + P
Sbjct: 7 FGDPVLRKRAKPVTKFDEALKRTIERMIETMYHYDGVGLAAPQVGISQRFFVMDVGNGP- 65
Query: 433 EGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ ++NP+I + S + +EGCLSFP I+ E+ R + V
Sbjct: 66 ----VAVINPEILEASPETEIAEEGCLSFPEIFVEIERSKRV 103
[245][TOP]
>UniRef100_Q98D52 Peptide deformylase n=1 Tax=Mesorhizobium loti RepID=DEF_RHILO
Length = 176
Score = 80.1 bits (196), Expect = 1e-13
Identities = 44/109 (40%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Frame = +1
Query: 235 PLK-IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVF 411
P+K ++ PDPILR +K ++ D L+ L D M MY GIGL+A Q+G ++++V
Sbjct: 2 PIKPLIILPDPILRQVSKPVERVDAPLRKLADDMLATMYDAPGIGLAAIQIGEPLRMLVI 61
Query: 412 NPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ A E V +NP+I + ++ ++EGCLS P YAEV RP SV
Sbjct: 62 DLAKEDETPAPHVFINPEILESAEARSVYEEGCLSIPDYYAEVERPASV 110
[246][TOP]
>UniRef100_Q5QXI5 Peptide deformylase n=1 Tax=Idiomarina loihiensis RepID=DEF_IDILO
Length = 174
Score = 80.1 bits (196), Expect = 1e-13
Identities = 39/107 (36%), Positives = 72/107 (67%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
+ +++YPD LR ++I+ D+N+++++D MF+ MY+ G+GL+A QV ++ +L V +
Sbjct: 4 MTVLQYPDERLRKVAQKIEKVDDNIRSVIDDMFETMYEEQGVGLAATQVDVHRRLFVSDC 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ + E +V +NP+I + ++ DEGCLSFPG+YA+V R + +
Sbjct: 64 SEDQNE--PLVFINPEITE-AEGHFKNDEGCLSFPGVYAKVERAERI 107
[247][TOP]
>UniRef100_Q16AL4 Peptide deformylase n=1 Tax=Roseobacter denitrificans OCh 114
RepID=Q16AL4_ROSDO
Length = 175
Score = 79.7 bits (195), Expect = 1e-13
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
I+ +PDP L+ + + + L+ L D M + MY GIGL+APQVG+ +++V +
Sbjct: 8 IILHPDPRLKKTAEPVADISDELRRLGDDMLETMYDAPGIGLAAPQVGILQRVVVMDCIK 67
Query: 424 EPGE-GKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
EPG+ + +++ NP++ SD+ ++EGCLS P +AEV RP V
Sbjct: 68 EPGDTPRPVIMFNPEVIATSDETSVYEEGCLSIPEQFAEVTRPAEV 113
[248][TOP]
>UniRef100_A7IKJ1 Peptide deformylase n=1 Tax=Xanthobacter autotrophicus Py2
RepID=A7IKJ1_XANP2
Length = 172
Score = 79.7 bits (195), Expect = 1e-13
Identities = 43/105 (40%), Positives = 61/105 (58%)
Frame = +1
Query: 244 IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAG 423
I+ P+P LR + ++ D +K LV+ MFD MY GIGL+A QVG+ +++ + A
Sbjct: 6 ILIIPEPKLRTLSASVEKIDSEVKKLVEDMFDTMYDAPGIGLAAIQVGVQRRVVTIDVAR 65
Query: 424 EPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
E K I L+NP+I S++ + EGCLS P Y EV RP V
Sbjct: 66 EGEAKKPIALINPEIIAASEETSVYAEGCLSIPEYYEEVERPARV 110
[249][TOP]
>UniRef100_A3M157 Peptide deformylase n=6 Tax=Acinetobacter baumannii
RepID=A3M157_ACIBT
Length = 176
Score = 79.7 bits (195), Expect = 1e-13
Identities = 41/107 (38%), Positives = 64/107 (59%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L I+ +PDP LR K ++ + ++ L MF+ MY GIGL+A QV ++QL+V +
Sbjct: 4 LPILSFPDPRLRTIAKPVEEVTDEIRQLAADMFETMYAAPGIGLAASQVDRHIQLIVMDL 63
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ E +V +NPK+ +++ P++EGCLS P IY +V RP V
Sbjct: 64 SESKDE--PMVFINPKVTPLTEETQPYEEGCLSVPQIYDKVDRPSRV 108
[250][TOP]
>UniRef100_C1SP40 Peptide deformylase n=1 Tax=Denitrovibrio acetiphilus DSM 12809
RepID=C1SP40_9BACT
Length = 175
Score = 79.7 bits (195), Expect = 1e-13
Identities = 40/107 (37%), Positives = 66/107 (61%)
Frame = +1
Query: 238 LKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 417
L++ +PD +LR K + +D DE++ L+D M + M+ G+GL+APQVG++ +L+V +
Sbjct: 3 LEVKTFPDKVLRIKAEPVDSIDESITELLDNMVETMHARSGVGLAAPQVGISKRLIVIDT 62
Query: 418 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSV 558
+ EG + ++NP+I + V +EGCLS PG Y V R + V
Sbjct: 63 SAGENEGMLLRVINPEIISAEGEQVG-EEGCLSIPGEYEPVRRAEKV 108