AV442546 ( APZ24d07_r )

[UP]


[1][TOP]
>UniRef100_Q9ZUU4 Ribonucleoprotein At2g37220, chloroplastic n=2 Tax=Arabidopsis
           thaliana RepID=ROC1_ARATH
          Length = 289

 Score =  177 bits (448), Expect = 4e-43
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = +3

Query: 39  MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA 218
           MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA
Sbjct: 1   MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA 60

Query: 219 RNVAITSEFEVEEDGFADVAPPKEQSFSADLK 314
           RNVAITSEFEVEEDGFADVAPPKEQSFSADLK
Sbjct: 61  RNVAITSEFEVEEDGFADVAPPKEQSFSADLK 92

[2][TOP]
>UniRef100_Q8L941 Putative RNA-binding protein n=1 Tax=Arabidopsis thaliana
           RepID=Q8L941_ARATH
          Length = 289

 Score =  175 bits (444), Expect = 1e-42
 Identities = 91/92 (98%), Positives = 91/92 (98%)
 Frame = +3

Query: 39  MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA 218
           MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRF 
Sbjct: 1   MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFV 60

Query: 219 RNVAITSEFEVEEDGFADVAPPKEQSFSADLK 314
           RNVAITSEFEVEEDGFADVAPPKEQSFSADLK
Sbjct: 61  RNVAITSEFEVEEDGFADVAPPKEQSFSADLK 92

[3][TOP]
>UniRef100_Q43349-2 Isoform 2 of 29 kDa ribonucleoprotein, chloroplastic n=1
           Tax=Arabidopsis thaliana RepID=Q43349-2
          Length = 334

 Score = 97.8 bits (242), Expect = 3e-19
 Identities = 65/102 (63%), Positives = 75/102 (73%), Gaps = 10/102 (9%)
 Frame = +3

Query: 39  MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSD---SVSFSIAAKWNSPA- 206
           M+ASASSL  S+FNPKSLP  VSRPASVS+L PSLSFKL+SD   S+  S A K +SPA 
Sbjct: 1   MSASASSL--SAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAE 58

Query: 207 --SRFARNVAITSEFEVEEDG-FA---DVAPPKEQSFSADLK 314
             SRF RNVA++S+FEVEED  FA   D AP +  SFS DLK
Sbjct: 59  YPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLK 100

[4][TOP]
>UniRef100_Q43349 29 kDa ribonucleoprotein, chloroplastic n=1 Tax=Arabidopsis
           thaliana RepID=ROC2_ARATH
          Length = 342

 Score = 97.8 bits (242), Expect = 3e-19
 Identities = 65/102 (63%), Positives = 75/102 (73%), Gaps = 10/102 (9%)
 Frame = +3

Query: 39  MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSD---SVSFSIAAKWNSPA- 206
           M+ASASSL  S+FNPKSLP  VSRPASVS+L PSLSFKL+SD   S+  S A K +SPA 
Sbjct: 1   MSASASSL--SAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASSALKCSSPAE 58

Query: 207 --SRFARNVAITSEFEVEEDG-FA---DVAPPKEQSFSADLK 314
             SRF RNVA++S+FEVEED  FA   D AP +  SFS DLK
Sbjct: 59  YPSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLK 100

[5][TOP]
>UniRef100_B9IFN7 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IFN7_POPTR
          Length = 273

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 43/92 (46%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
 Frame = +3

Query: 42  AASASSLALSSFN-PKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFA 218
           AASASSL L S N P ++    S+P S+  LSPS +  L   S+  S   +    +SRF 
Sbjct: 3   AASASSLVLPSLNHPNTIKSFYSKPNSLFFLSPSSTSSLKPVSLLLSFQHQQQPLSSRFL 62

Query: 219 RNVAITSEFEVEEDGFADVAPPKEQSFSADLK 314
           +NVAI+SEF  EED  +D     EQSFS DLK
Sbjct: 63  KNVAISSEFGQEEDFLSD---GDEQSFSQDLK 91

[6][TOP]
>UniRef100_A7PT43 Chromosome chr8 scaffold_29, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7PT43_VITVI
          Length = 288

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 5/95 (5%)
 Frame = +3

Query: 45  ASASSLALSSFN-PKSLPFGVSRPASVSLLSPSLS---FKLNSDSVSFSIAAK-WNSPAS 209
           ASASSL L S + PK+L   +S+P SVS  S   S    KL+S+S+S S +++ + + +S
Sbjct: 2   ASASSLVLPSLSLPKTL--AISKPTSVSFFSLPFSCSSLKLHSNSISLSPSSRGFLTLSS 59

Query: 210 RFARNVAITSEFEVEEDGFADVAPPKEQSFSADLK 314
           RF RNVA++S++E +ED  +D   P   SFS DLK
Sbjct: 60  RFVRNVAVSSDYEQDEDVLSDEGEP---SFSPDLK 91

[7][TOP]
>UniRef100_B9MTC6 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9MTC6_POPTR
          Length = 286

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
 Frame = +3

Query: 42  AASASSLALSSFN-PKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSP-ASRF 215
           A SASSL L S N P ++    S+P S+S LS S +  +   S+  S   K   P +SRF
Sbjct: 3   ATSASSLVLPSLNHPNTIKSFYSKPTSLSFLSLSSTSSIKPASLFLSFQQKQQQPLSSRF 62

Query: 216 ARNVAITSEFEVEEDGFADVAPPKEQSFSADLK 314
            ++VAI+SEF  EED F D     E SFS DL+
Sbjct: 63  LKSVAISSEFGQEEDVFGD---GDEPSFSPDLQ 92