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[1][TOP]
>UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis
thaliana RepID=Q9FLV3_ARATH
Length = 365
Score = 202 bits (515), Expect(2) = 8e-95
Identities = 99/99 (100%), Positives = 99/99 (100%)
Frame = +3
Query: 3 KICESLSLSQMATLLGFSQTKFHHCGVWISTPPCSSSSTVVSMVGLNRTDSKKLRSDFLG 182
KICESLSLSQMATLLGFSQTKFHHCGVWISTPPCSSSSTVVSMVGLNRTDSKKLRSDFLG
Sbjct: 48 KICESLSLSQMATLLGFSQTKFHHCGVWISTPPCSSSSTVVSMVGLNRTDSKKLRSDFLG 107
Query: 183 QIGYEDRRQVRHSYCRSSLAVKMSWDGPLASVKLIIQGK 299
QIGYEDRRQVRHSYCRSSLAVKMSWDGPLASVKLIIQGK
Sbjct: 108 QIGYEDRRQVRHSYCRSSLAVKMSWDGPLASVKLIIQGK 146
Score = 169 bits (427), Expect(2) = 8e-95
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH
Sbjct: 146 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 205
Query: 478 GVVRAEEDAETVYACIDLVSTIIQ 549
GVVRAEEDAETVYACIDLVSTIIQ
Sbjct: 206 GVVRAEEDAETVYACIDLVSTIIQ 229
[2][TOP]
>UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR
Length = 306
Score = 148 bits (373), Expect(2) = 2e-44
Identities = 71/84 (84%), Positives = 80/84 (95%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
KNLEL++ +K+HVE+KVGK+VQKHSHLVREVDVRLSVRGGE GKGPRIRRCEVTLFT +H
Sbjct: 93 KNLELTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGGELGKGPRIRRCEVTLFTNRH 152
Query: 478 GVVRAEEDAETVYACIDLVSTIIQ 549
GVVRAEEDAET+YA IDLVS+IIQ
Sbjct: 153 GVVRAEEDAETIYASIDLVSSIIQ 176
Score = 55.1 bits (131), Expect(2) = 2e-44
Identities = 44/99 (44%), Positives = 58/99 (58%), Gaps = 10/99 (10%)
Frame = +3
Query: 33 MATLL-GFSQTKFHHCGVWIS-TPPCSS--SSTVVSMVGLNRTDSKKLRSDFLG------ 182
MA+L+ G QT F++ V +S TPP +S SS+V+S + L+S FLG
Sbjct: 1 MASLVEGTLQTSFNNPFVSLSPTPPKTSLASSSVISTK--TQIPKSSLKSSFLGKNMSFI 58
Query: 183 QIGYEDRRQVRHSYCRSSLAVKMSWDGPLASVKLIIQGK 299
++G R + H C +VKMSWDGPL SVKLIIQGK
Sbjct: 59 ELGRTARTPLTHGGC----SVKMSWDGPLHSVKLIIQGK 93
[3][TOP]
>UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9SEK8_RICCO
Length = 311
Score = 152 bits (383), Expect(2) = 5e-44
Identities = 72/84 (85%), Positives = 82/84 (97%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
KNLEL++ +K+HVE+KVGK+VQKHSHLVREVDVRLSVRGGEFGKGP+IRRCEVTLFTKKH
Sbjct: 95 KNLELTDTVKKHVEDKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPKIRRCEVTLFTKKH 154
Query: 478 GVVRAEEDAETVYACIDLVSTIIQ 549
GV+RAEEDAET+YA IDLVS+IIQ
Sbjct: 155 GVIRAEEDAETIYASIDLVSSIIQ 178
Score = 50.1 bits (118), Expect(2) = 5e-44
Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Frame = +3
Query: 33 MATLLGFSQTKFHHCGVWISTPPCSSSSTVVSMVGLNRTDSKKLR---------SDFLG- 182
M TLLG QT FH+ +P ++SS+ S+ L SKKLR + FL
Sbjct: 1 MTTLLGSLQTTFHNLPRVSLSPKAATSSSCSSICILG---SKKLRLPSFSLSSKTSFLNP 57
Query: 183 -----QIGYEDRRQVRHSYCRSSLAVKMSWDGPLASVKLIIQGK 299
+ Y + ++ R S AV+MSW+GPL+SVKLI QGK
Sbjct: 58 LKLGSNVKYFENKRGRRS------AVRMSWEGPLSSVKLITQGK 95
[4][TOP]
>UniRef100_A9PJW3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJW3_9ROSI
Length = 268
Score = 141 bits (356), Expect(2) = 7e-41
Identities = 69/84 (82%), Positives = 78/84 (92%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
K+LELS+ +K+HVE+KVGK+VQK SHLVR VDVRLSVRGGE GKGPRIRRCEVTLFTK+H
Sbjct: 92 KHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGGELGKGPRIRRCEVTLFTKRH 151
Query: 478 GVVRAEEDAETVYACIDLVSTIIQ 549
GVVRAEEDAET+YA IDL S+IIQ
Sbjct: 152 GVVRAEEDAETIYASIDLASSIIQ 175
Score = 50.1 bits (118), Expect(2) = 7e-41
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Frame = +3
Query: 33 MATLLGFSQTKFHH-CGVWISTPPCSSSSTVVSMVGLNRTDSKK--LRSDFLGQ-IGY-E 197
MA+L+G F++ ST P S ++ S V +T K L+S FLG+ + + E
Sbjct: 1 MASLVGTLHASFNNRIAPLTSTTPTPSLAS--SFVNSTKTQVPKVFLKSRFLGKNVNFAE 58
Query: 198 DRRQVRHSYCRSSLAVKMSWDGPLASVKLIIQGK 299
RR+ + +++MSWDGPL+SVKLIIQGK
Sbjct: 59 IRRKTKIPLSHGGSSIRMSWDGPLSSVKLIIQGK 92
[5][TOP]
>UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PHY3_POPTR
Length = 306
Score = 141 bits (355), Expect(2) = 2e-40
Identities = 69/84 (82%), Positives = 79/84 (94%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
K+LELS+ +K+HVE+KVGK+VQK SHLVR VDVRLSVRGGE GKGPRIRRCEVTLFTK+H
Sbjct: 92 KHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGGELGKGPRIRRCEVTLFTKRH 151
Query: 478 GVVRAEEDAETVYACIDLVSTIIQ 549
GVVRAEEDAET++A IDLVS+IIQ
Sbjct: 152 GVVRAEEDAETIHASIDLVSSIIQ 175
Score = 49.3 bits (116), Expect(2) = 2e-40
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Frame = +3
Query: 33 MATLLGFSQTKFHH-CGVWISTPPCSSSSTVVSMVGLNRTDSKK--LRSDFLGQ-IGY-E 197
MA+L+G F++ ST P S ++ S V +T K L+S FLG+ + + E
Sbjct: 1 MASLVGTLHAGFNNRIAPLTSTTPTPSLAS--SFVNSTKTQVPKVFLKSRFLGKNVNFVE 58
Query: 198 DRRQVRHSYCRSSLAVKMSWDGPLASVKLIIQGK 299
RR+ + +++MSWDGPL+SVKLIIQGK
Sbjct: 59 IRRKTKIPLSHGGSSIRMSWDGPLSSVKLIIQGK 92
[6][TOP]
>UniRef100_C6TFU4 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TFU4_SOYBN
Length = 208
Score = 140 bits (352), Expect(2) = 1e-39
Identities = 68/85 (80%), Positives = 79/85 (92%), Gaps = 1/85 (1%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGG-EFGKGPRIRRCEVTLFTKK 474
KNLEL++ +K+HVE+KVGK+VQKHSHLVREVDVRLS+RGG EFG+GPR RRCEVTLFTK+
Sbjct: 77 KNLELTDAVKRHVEDKVGKAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKR 136
Query: 475 HGVVRAEEDAETVYACIDLVSTIIQ 549
HGVVRAEEDAE+ Y IDLVS+IIQ
Sbjct: 137 HGVVRAEEDAESTYGSIDLVSSIIQ 161
Score = 47.4 bits (111), Expect(2) = 1e-39
Identities = 36/89 (40%), Positives = 43/89 (48%)
Frame = +3
Query: 33 MATLLGFSQTKFHHCGVWISTPPCSSSSTVVSMVGLNRTDSKKLRSDFLGQIGYEDRRQV 212
MATL F+ T C + P S SS+ S L + FLG I
Sbjct: 1 MATLFNFNSTLRPSCYL-----PLSPSSSYPHF-------SNTLSTTFLGHIVTLKYAAT 48
Query: 213 RHSYCRSSLAVKMSWDGPLASVKLIIQGK 299
S SL+ +MSWDGPL+SVKLIIQGK
Sbjct: 49 STSNRGRSLSTRMSWDGPLSSVKLIIQGK 77
[7][TOP]
>UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum
RepID=Q672Q2_SOLLC
Length = 311
Score = 139 bits (349), Expect(2) = 4e-39
Identities = 65/84 (77%), Positives = 76/84 (90%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
KNLEL+ +K +VEEK+GK+VQKHSHL REVDVRLSVRGGE GKGP+IRRCEVTLFTKKH
Sbjct: 92 KNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGGELGKGPKIRRCEVTLFTKKH 151
Query: 478 GVVRAEEDAETVYACIDLVSTIIQ 549
GV+RAEED E++Y ID+VS+IIQ
Sbjct: 152 GVIRAEEDGESIYGSIDMVSSIIQ 175
Score = 47.0 bits (110), Expect(2) = 4e-39
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +3
Query: 102 CSSSSTVVSMVGLNRTDSKKLRSDF-LGQIGYEDRRQVRHSYCRSSLAVKMSWDGPLASV 278
C ++++ + L+ T+S+ L S F + +I R +V S+ V+MSWDGPL+SV
Sbjct: 31 CPATASPALSLTLSSTNSRFLNSAFKMNEINVPVRNRVTKSF-----GVRMSWDGPLSSV 85
Query: 279 KLIIQGK 299
KLI+QGK
Sbjct: 86 KLILQGK 92
[8][TOP]
>UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984F94
Length = 298
Score = 143 bits (361), Expect(2) = 5e-39
Identities = 68/84 (80%), Positives = 78/84 (92%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
KNLEL++ ++ HVEEKVGK+VQKHSHLVREVDVRLS+RGGE GKGP+IRRCEVTLFTKKH
Sbjct: 85 KNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGGELGKGPKIRRCEVTLFTKKH 144
Query: 478 GVVRAEEDAETVYACIDLVSTIIQ 549
GVVRAEE AET+Y ID+VS+IIQ
Sbjct: 145 GVVRAEEHAETLYGSIDMVSSIIQ 168
Score = 42.0 bits (97), Expect(2) = 5e-39
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 237 LAVKMSWDGPLASVKLIIQGK 299
LAV+MSWDGPL+SVKLI+QGK
Sbjct: 65 LAVRMSWDGPLSSVKLILQGK 85
[9][TOP]
>UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum
RepID=C9EFD1_SOLTU
Length = 280
Score = 140 bits (353), Expect(2) = 1e-38
Identities = 66/84 (78%), Positives = 77/84 (91%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
KNLEL+ +K +VEEK+GK+VQKHSHL REVDVRLSVRGGE GKGP+IRRCEVTLFTKKH
Sbjct: 64 KNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGGELGKGPKIRRCEVTLFTKKH 123
Query: 478 GVVRAEEDAETVYACIDLVSTIIQ 549
GV+RAEEDAE++Y ID+VS+IIQ
Sbjct: 124 GVIRAEEDAESIYGSIDMVSSIIQ 147
Score = 43.5 bits (101), Expect(2) = 1e-38
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 102 CSSSSTVVSMVGLNRTDSKKLRSDFL-GQIGYEDRRQVRHSYCRSSLAVKMSWDGPLASV 278
C ++++ + L+ ++S L S F +I R +V+ S+ V+MSWDGPL+SV
Sbjct: 3 CPTTASPAFSLTLSSSNSGFLNSAFKKNEINVPVRNRVKXSF-----GVRMSWDGPLSSV 57
Query: 279 KLIIQGK 299
KLI+QGK
Sbjct: 58 KLILQGK 64
[10][TOP]
>UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T7E3_SOYBN
Length = 291
Score = 141 bits (356), Expect(2) = 2e-38
Identities = 69/85 (81%), Positives = 79/85 (92%), Gaps = 1/85 (1%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGG-EFGKGPRIRRCEVTLFTKK 474
KNLEL++ +KQHVE+KVGK+VQKHSHLVREVDVRLS+RGG EFG+GPR RRCEVTLFTK+
Sbjct: 77 KNLELTDAVKQHVEDKVGKAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKR 136
Query: 475 HGVVRAEEDAETVYACIDLVSTIIQ 549
HGVVRAEEDAE+ Y IDLVS+IIQ
Sbjct: 137 HGVVRAEEDAESTYGSIDLVSSIIQ 161
Score = 42.0 bits (97), Expect(2) = 2e-38
Identities = 34/89 (38%), Positives = 39/89 (43%)
Frame = +3
Query: 33 MATLLGFSQTKFHHCGVWISTPPCSSSSTVVSMVGLNRTDSKKLRSDFLGQIGYEDRRQV 212
MATL F+ T C P S SS+ K L + FLG
Sbjct: 1 MATLFNFNSTLRPSC-----YHPSSPSSSYPHFF-------KTLSTTFLGHTVTLKYAAT 48
Query: 213 RHSYCRSSLAVKMSWDGPLASVKLIIQGK 299
S SL+ MSWDGPL+SVKL IQGK
Sbjct: 49 SASIPPRSLSAHMSWDGPLSSVKLTIQGK 77
[11][TOP]
>UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QEV5_VITVI
Length = 230
Score = 143 bits (361), Expect(2) = 2e-37
Identities = 68/84 (80%), Positives = 78/84 (92%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
KNLEL++ ++ HVEEKVGK+VQKHSHLVREVDVRLS+RGGE GKGP+IRRCEVTLFTKKH
Sbjct: 17 KNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGGELGKGPKIRRCEVTLFTKKH 76
Query: 478 GVVRAEEDAETVYACIDLVSTIIQ 549
GVVRAEE AET+Y ID+VS+IIQ
Sbjct: 77 GVVRAEEHAETLYGSIDMVSSIIQ 100
Score = 36.6 bits (83), Expect(2) = 2e-37
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +3
Query: 249 MSWDGPLASVKLIIQGK 299
MSWDGPL+SVKLI+QGK
Sbjct: 1 MSWDGPLSSVKLILQGK 17
[12][TOP]
>UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR
Length = 231
Score = 141 bits (355), Expect(2) = 6e-37
Identities = 69/84 (82%), Positives = 79/84 (94%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
K+LELS+ +K+HVE+KVGK+VQK SHLVR VDVRLSVRGGE GKGPRIRRCEVTLFTK+H
Sbjct: 17 KHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGGELGKGPRIRRCEVTLFTKRH 76
Query: 478 GVVRAEEDAETVYACIDLVSTIIQ 549
GVVRAEEDAET++A IDLVS+IIQ
Sbjct: 77 GVVRAEEDAETIHASIDLVSSIIQ 100
Score = 37.4 bits (85), Expect(2) = 6e-37
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 249 MSWDGPLASVKLIIQGK 299
MSWDGPL+SVKLIIQGK
Sbjct: 1 MSWDGPLSSVKLIIQGK 17
[13][TOP]
>UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea
RepID=RR30_SPIOL
Length = 302
Score = 135 bits (339), Expect(2) = 8e-35
Identities = 62/84 (73%), Positives = 77/84 (91%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
+NLE+S+ ++ HVE+KVGKSV KHSHLVREVDVRLS RGG+ KGP++RRCEVTLFTK+H
Sbjct: 82 RNLEVSDNVRSHVEDKVGKSVAKHSHLVREVDVRLSARGGDLSKGPKLRRCEVTLFTKRH 141
Query: 478 GVVRAEEDAETVYACIDLVSTIIQ 549
GV+RAEEDAE++Y+ IDLVS+IIQ
Sbjct: 142 GVIRAEEDAESLYSSIDLVSSIIQ 165
Score = 36.2 bits (82), Expect(2) = 8e-35
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3
Query: 243 VKMSWDGPLASVKLIIQGKKPRV 311
V MSWDGPL+SVKLI+QG+ V
Sbjct: 64 VCMSWDGPLSSVKLILQGRNLEV 86
[14][TOP]
>UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group
RepID=C6YXL0_ORYSJ
Length = 321
Score = 123 bits (309), Expect(2) = 6e-33
Identities = 55/84 (65%), Positives = 73/84 (86%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
+N++L+E +K+H+EEK G++V KHS LV+EVDVRLS RGGE +GP+I RCE+TLFTK+H
Sbjct: 88 RNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVRLSARGGELSRGPKICRCEITLFTKRH 147
Query: 478 GVVRAEEDAETVYACIDLVSTIIQ 549
GV+RAEEDAE+ YA IDL S+II+
Sbjct: 148 GVIRAEEDAESTYASIDLASSIIK 171
Score = 41.6 bits (96), Expect(2) = 6e-33
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Frame = +3
Query: 153 SKKLRSDFLGQI----GYEDRRQVRHSYCRSSLAVKMSWDGPLASVKLIIQGKKPRV 311
S LRS FLG+ + S S+++V+MSWDGPL+SV+LI+QG+ ++
Sbjct: 36 SVPLRSGFLGRALPAAAHPQPLLAAESRRSSAVSVRMSWDGPLSSVRLIMQGRNVKL 92
[15][TOP]
>UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ
Length = 309
Score = 123 bits (309), Expect(2) = 6e-33
Identities = 55/84 (65%), Positives = 73/84 (86%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
+N++L+E +K+H+EEK G++V KHS LV+EVDVRLS RGGE +GP+I RCE+TLFTK+H
Sbjct: 88 RNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVRLSARGGELSRGPKICRCEITLFTKRH 147
Query: 478 GVVRAEEDAETVYACIDLVSTIIQ 549
GV+RAEEDAE+ YA IDL S+II+
Sbjct: 148 GVIRAEEDAESTYASIDLASSIIK 171
Score = 41.6 bits (96), Expect(2) = 6e-33
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Frame = +3
Query: 153 SKKLRSDFLGQI----GYEDRRQVRHSYCRSSLAVKMSWDGPLASVKLIIQGKKPRV 311
S LRS FLG+ + S S+++V+MSWDGPL+SV+LI+QG+ ++
Sbjct: 36 SVPLRSGFLGRALPAAAHPQPLLAAESRRSSAVSVRMSWDGPLSSVRLIMQGRNVKL 92
[16][TOP]
>UniRef100_Q10AC8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative,
expressed n=1 Tax=Oryza sativa Japonica Group
RepID=Q10AC8_ORYSJ
Length = 241
Score = 123 bits (309), Expect(2) = 6e-33
Identities = 55/84 (65%), Positives = 73/84 (86%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
+N++L+E +K+H+EEK G++V KHS LV+EVDVRLS RGGE +GP+I RCE+TLFTK+H
Sbjct: 88 RNVKLNEKVKEHIEEKAGRAVAKHSQLVKEVDVRLSARGGELSRGPKICRCEITLFTKRH 147
Query: 478 GVVRAEEDAETVYACIDLVSTIIQ 549
GV+RAEEDAE+ YA IDL S+II+
Sbjct: 148 GVIRAEEDAESTYASIDLASSIIK 171
Score = 41.6 bits (96), Expect(2) = 6e-33
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Frame = +3
Query: 153 SKKLRSDFLGQI----GYEDRRQVRHSYCRSSLAVKMSWDGPLASVKLIIQGKKPRV 311
S LRS FLG+ + S S+++V+MSWDGPL+SV+LI+QG+ ++
Sbjct: 36 SVPLRSGFLGRALPAAAHPQPLLAAESRRSSAVSVRMSWDGPLSSVRLIMQGRNVKL 92
[17][TOP]
>UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum
bicolor RepID=C5WRX8_SORBI
Length = 310
Score = 123 bits (309), Expect(2) = 1e-32
Identities = 54/84 (64%), Positives = 73/84 (86%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
+N++LS+ +K+H+E+KVG++V KH HLVREVDVRLS RGGE G+GP+ RCE+TLF+K+H
Sbjct: 79 RNVKLSDKLKEHIEDKVGRAVSKHCHLVREVDVRLSARGGELGRGPKTSRCEITLFSKRH 138
Query: 478 GVVRAEEDAETVYACIDLVSTIIQ 549
GV+RAEEDAE+ YA IDL + II+
Sbjct: 139 GVLRAEEDAESTYASIDLAAAIIK 162
Score = 40.8 bits (94), Expect(2) = 1e-32
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 8/61 (13%)
Frame = +3
Query: 153 SKKLRSDFLGQ-------IGYEDRR-QVRHSYCRSSLAVKMSWDGPLASVKLIIQGKKPR 308
S LRS FLG+ + +D R ++R R S +V+M+WDGPL+SV+LI+QG+ +
Sbjct: 26 SVALRSGFLGRGLAAVVPVAVDDPRCRLRR---RVSFSVRMAWDGPLSSVRLIMQGRNVK 82
Query: 309 V 311
+
Sbjct: 83 L 83
[18][TOP]
>UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LMC5_PICSI
Length = 321
Score = 132 bits (333), Expect(2) = 2e-32
Identities = 62/84 (73%), Positives = 77/84 (91%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
KN +L++ +K ++EEKVG +VQKH++LVREVDVRLS+RGGE GKGP+IRRCEVTLFTKKH
Sbjct: 95 KNFQLTDAVKAYIEEKVGIAVQKHANLVREVDVRLSIRGGEVGKGPKIRRCEVTLFTKKH 154
Query: 478 GVVRAEEDAETVYACIDLVSTIIQ 549
GVVRAEE+AET+YA ID+VS II+
Sbjct: 155 GVVRAEEEAETIYASIDIVSDIIR 178
Score = 30.4 bits (67), Expect(2) = 2e-32
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 255 WDGPLASVKLIIQGK 299
W GPL+SV+LIIQGK
Sbjct: 81 WSGPLSSVRLIIQGK 95
[19][TOP]
>UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays
RepID=B6TYP8_MAIZE
Length = 309
Score = 125 bits (314), Expect(2) = 4e-32
Identities = 55/86 (63%), Positives = 73/86 (84%)
Frame = +1
Query: 292 KEKNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTK 471
+ +N +LSE +K+H+E+KVG++V KH HLVREVDVRLS RGGE G+GP+ RCE+TLFTK
Sbjct: 77 QSRNAKLSEKLKEHIEDKVGRAVSKHCHLVREVDVRLSARGGELGRGPKTSRCEITLFTK 136
Query: 472 KHGVVRAEEDAETVYACIDLVSTIIQ 549
+HGV+RAEEDAE+ YA IDL + I++
Sbjct: 137 RHGVLRAEEDAESTYASIDLAAAIVK 162
Score = 37.0 bits (84), Expect(2) = 4e-32
Identities = 14/28 (50%), Positives = 24/28 (85%)
Frame = +3
Query: 228 RSSLAVKMSWDGPLASVKLIIQGKKPRV 311
R S++V+M+WDGPL+SV+LI+Q + ++
Sbjct: 56 RVSVSVRMAWDGPLSSVRLIMQSRNAKL 83
[20][TOP]
>UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TA00_PHYPA
Length = 297
Score = 119 bits (297), Expect(2) = 1e-27
Identities = 58/83 (69%), Positives = 72/83 (86%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
K+LEL++ IKQ+VEEKVG +V S LV+EVDVR+SVRGGE G+G R++RCEVTLFTKKH
Sbjct: 95 KHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRGGETGRGERLQRCEVTLFTKKH 154
Query: 478 GVVRAEEDAETVYACIDLVSTII 546
GVVRAEE+AE++YA ID VS +I
Sbjct: 155 GVVRAEEEAESMYASIDRVSDVI 177
Score = 28.5 bits (62), Expect(2) = 1e-27
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 249 MSWDGPLASVKLIIQGK 299
M+W G LA V+L+IQGK
Sbjct: 79 MAWGGTLAGVRLVIQGK 95
[21][TOP]
>UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWK9_PHYPA
Length = 221
Score = 117 bits (293), Expect(2) = 3e-27
Identities = 57/83 (68%), Positives = 72/83 (86%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
K+LEL++ IKQ+VEEKVG +V S LV+EVDVR+SVRGGE G+G +++RCEVTLFTKKH
Sbjct: 17 KHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRGGETGRGGKLQRCEVTLFTKKH 76
Query: 478 GVVRAEEDAETVYACIDLVSTII 546
GVVRAEE+AE++YA ID VS +I
Sbjct: 77 GVVRAEEEAESMYASIDRVSDVI 99
Score = 28.5 bits (62), Expect(2) = 3e-27
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 249 MSWDGPLASVKLIIQGK 299
M+W G LA V+L+IQGK
Sbjct: 1 MAWGGALAGVRLVIQGK 17
[22][TOP]
>UniRef100_B9NF07 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NF07_POPTR
Length = 127
Score = 114 bits (286), Expect = 4e-24
Identities = 56/82 (68%), Positives = 69/82 (84%)
Frame = +1
Query: 304 LELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGV 483
++L++ +K+HVE+KVGK+VQK SHLVREVD RLSVRGGE GKGPRIR+C +HGV
Sbjct: 1 MQLTDTVKEHVEDKVGKAVQKFSHLVREVDARLSVRGGELGKGPRIRKC-------RHGV 53
Query: 484 VRAEEDAETVYACIDLVSTIIQ 549
VRAEED+ET+YA IDLV +IIQ
Sbjct: 54 VRAEEDSETIYATIDLVLSIIQ 75
[23][TOP]
>UniRef100_Q5MCR1 Chloroplast-specific ribosome-associated protein n=1 Tax=Volvox
carteri f. nagariensis RepID=Q5MCR1_VOLCA
Length = 232
Score = 76.3 bits (186), Expect = 1e-12
Identities = 37/80 (46%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFG-KGPRIRRCEVTLFTKK 474
+ L ++ IK++VEEKV K++Q +H ++EVDV LS RGG+ G G + ++ +VT+FT +
Sbjct: 81 RKLPVTNAIKEYVEEKVAKAIQNFAHTLKEVDVTLSARGGDTGTHGKKEQKVDVTIFTLR 140
Query: 475 HGVVRAEEDAETVYACIDLV 534
+GVVR E+ +YA IDLV
Sbjct: 141 NGVVRVEDRESNLYAAIDLV 160
[24][TOP]
>UniRef100_A8J8B2 Plastid-specific ribosomal protein 1 n=1 Tax=Chlamydomonas
reinhardtii RepID=A8J8B2_CHLRE
Length = 286
Score = 74.7 bits (182), Expect = 4e-12
Identities = 38/80 (47%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFG-KGPRIRRCEVTLFTKK 474
+ L +++ IK +VEEKV K+V SH ++EVDV LS RGG+ G G + ++ EVT++T +
Sbjct: 77 RKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLR 136
Query: 475 HGVVRAEEDAETVYACIDLV 534
+GVVR E+ +YA IDLV
Sbjct: 137 NGVVRVEDAENNLYAAIDLV 156
[25][TOP]
>UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO
Length = 284
Score = 68.2 bits (165), Expect = 4e-10
Identities = 37/83 (44%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHS-HLVREVDVRLSVRGGEFGKGP--RIRRCEVTLFT 468
++LE+++ I+++ EEK+ K+V H VREVDVR S RGG K P +++ EVT++T
Sbjct: 87 RHLEITDSIREYAEEKINKAVAHFDQHDVREVDVRCSSRGGADKKTPGGALQKTEVTVYT 146
Query: 469 KKHGVVRAEEDAETVYACIDLVS 537
+ +G++R+EE+A+ +YA ID VS
Sbjct: 147 R-NGIIRSEEEADDLYASIDAVS 168
[26][TOP]
>UniRef100_C1N7A9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N7A9_9CHLO
Length = 245
Score = 61.2 bits (147), Expect = 5e-08
Identities = 36/85 (42%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHS-HLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKK 474
++LE++E I+ + E+K+ K+V H VREVDV S R E +G ++ +VT++T+
Sbjct: 53 RHLEITEAIRDYCEQKINKAVSHFDMHDVREVDVTCSARS-EKQQGGDLQMTQVTVYTR- 110
Query: 475 HGVVRAEEDAETVYACIDLVSTIIQ 549
+GVVR+EE+A+ +YA ID VS I+
Sbjct: 111 NGVVRSEEEADNLYASIDAVSDKIE 135
[27][TOP]
>UniRef100_Q7V2R9 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
subsp. pastoris str. CCMP1986 RepID=Q7V2R9_PROMP
Length = 194
Score = 60.8 bits (146), Expect = 6e-08
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI--RRCEVTLFTK 471
KNLEL+ P+K++ E K+ K+ + +V+E D+ LS+ K PR+ + EVT+F
Sbjct: 8 KNLELTGPLKEYTEAKIEKATHHYKDIVKEADIHLSIE-----KNPRVSFQTAEVTIFA- 61
Query: 472 KHGVVRAEEDAETVYACIDLVS 537
++RAEE E +Y+ IDLVS
Sbjct: 62 NGTIIRAEEKTENLYSSIDLVS 83
[28][TOP]
>UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Microcoleus chthonoplastes PCC 7420
RepID=B4VJW0_9CYAN
Length = 215
Score = 60.8 bits (146), Expect = 6e-08
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFT 468
KN+E+++ I+++V +K+ K+V ++ EVDV LSV + PRI + EVT++
Sbjct: 8 KNIEITDSIREYVNQKIEKAVNHFQNMTTEVDVHLSV-----ARNPRINTKQTAEVTIYA 62
Query: 469 KKHGVVRAEEDAETVYACIDLVSTIIQ 549
K V+RA+E +E +YA IDLV+ IQ
Sbjct: 63 NK-TVIRAQESSEDLYASIDLVADKIQ 88
[29][TOP]
>UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4
Length = 209
Score = 60.5 bits (145), Expect = 8e-08
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFT 468
KN+E+++ I+ +V++K+ K+ +L E+DV LSV + PRI + EVT++T
Sbjct: 8 KNIEITDAIRDYVQQKIEKAANHFQNLTTEIDVHLSV-----ARNPRINPKQTAEVTIYT 62
Query: 469 KKHGVVRAEEDAETVYACIDLVS 537
V+RAEE +E +YA IDLVS
Sbjct: 63 -NGSVIRAEESSENLYASIDLVS 84
[30][TOP]
>UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0CDL4_ACAM1
Length = 212
Score = 60.5 bits (145), Expect = 8e-08
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFT 468
KN+E+++ I+++V +K+ K+ + +L E+DV LSV + PRI + EVTLF
Sbjct: 8 KNIEITDAIREYVHQKIEKAANHYQNLTTEIDVHLSV-----ARNPRITTKQTAEVTLFV 62
Query: 469 KKHGVVRAEEDAETVYACIDLVS 537
V+RAEE +E +YA IDLV+
Sbjct: 63 -NGSVIRAEESSENLYASIDLVA 84
[31][TOP]
>UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP
Length = 213
Score = 60.1 bits (144), Expect = 1e-07
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFT 468
KN+E+++ I+++V +K+ K+V ++ EVDV LSV + PRI + EVT+F
Sbjct: 8 KNIEITDAIREYVHQKIEKAVSHFQNITNEVDVHLSV-----ARNPRITTKQAAEVTIFA 62
Query: 469 KKHGVVRAEEDAETVYACIDLVS 537
V+RAEE +E +YA IDLV+
Sbjct: 63 -NGSVIRAEESSENLYASIDLVA 84
[32][TOP]
>UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YSA5_ANASP
Length = 213
Score = 58.9 bits (141), Expect = 2e-07
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFT 468
KN+E+++ I+++V +K+ K+V ++ EVDV LSV + PRI + EVT++
Sbjct: 8 KNIEITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV-----ARNPRINTRQAAEVTIYA 62
Query: 469 KKHGVVRAEEDAETVYACIDLVS 537
V+RAEE +E +YA IDLV+
Sbjct: 63 -NGSVIRAEESSENLYASIDLVA 84
[33][TOP]
>UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT
Length = 213
Score = 58.9 bits (141), Expect = 2e-07
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFT 468
KN+E+++ I+++V +K+ K+V ++ EVDV LSV + PRI + EVT++
Sbjct: 8 KNIEITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV-----ARNPRINTRQAAEVTIYA 62
Query: 469 KKHGVVRAEEDAETVYACIDLVS 537
V+RAEE +E +YA IDLV+
Sbjct: 63 -NGSVIRAEESSENLYASIDLVA 84
[34][TOP]
>UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YIH4_9CYAN
Length = 212
Score = 58.9 bits (141), Expect = 2e-07
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFT 468
KNLE++E I ++V +K+ K+V + L EVDV LS+ + PRI + EVT++
Sbjct: 8 KNLEITEAIHEYVHQKITKAVSHYQQLTNEVDVHLSI-----ARNPRINPKQTAEVTIYA 62
Query: 469 KKHGVVRAEEDAETVYACIDLVS 537
V+RA+E +E +YA IDLV+
Sbjct: 63 -NGTVIRAQESSENLYASIDLVA 84
[35][TOP]
>UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA
Length = 212
Score = 58.5 bits (140), Expect = 3e-07
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFT 468
KNLE+++ I ++V++K+ K+V L EVDV LSV + PRI + EVT++
Sbjct: 8 KNLEITDAIHEYVQQKIAKAVSHFQQLTNEVDVHLSV-----ARNPRINPRQTAEVTIYA 62
Query: 469 KKHGVVRAEEDAETVYACIDLVS 537
V+RA+E +E +YA IDLV+
Sbjct: 63 -NGTVIRAQESSENLYASIDLVA 84
[36][TOP]
>UniRef100_A8G3B2 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus str.
MIT 9215 RepID=A8G3B2_PROM2
Length = 194
Score = 58.2 bits (139), Expect = 4e-07
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI--RRCEVTLFTK 471
KNLEL+ +K++ E K+ K+ + +V+E D+ LS+ K PR+ + EVT+F
Sbjct: 8 KNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE-----KNPRVSFQTAEVTIFAN 62
Query: 472 KHGVVRAEEDAETVYACIDLVS 537
V+RAEE E +Y+ IDLVS
Sbjct: 63 GT-VIRAEEKTENLYSSIDLVS 83
[37][TOP]
>UniRef100_A3PBB8 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9301 RepID=A3PBB8_PROM0
Length = 194
Score = 58.2 bits (139), Expect = 4e-07
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI--RRCEVTLFTK 471
KNLEL+ +K++ E K+ K+ + +V+E D+ LS+ K PR+ + EVT+F
Sbjct: 8 KNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE-----KNPRVSFQTAEVTIFAN 62
Query: 472 KHGVVRAEEDAETVYACIDLVS 537
V+RAEE E +Y+ IDLVS
Sbjct: 63 GT-VIRAEEKTENLYSSIDLVS 83
[38][TOP]
>UniRef100_A2BPM8 Light repressed protein A n=1 Tax=Prochlorococcus marinus str.
AS9601 RepID=A2BPM8_PROMS
Length = 194
Score = 58.2 bits (139), Expect = 4e-07
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI--RRCEVTLFTK 471
KNLEL+ +K++ E K+ K+ + +V+E D+ LS+ K PR+ + EVT+F
Sbjct: 8 KNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE-----KNPRVSFQTAEVTIFAN 62
Query: 472 KHGVVRAEEDAETVYACIDLVS 537
V+RAEE E +Y+ IDLVS
Sbjct: 63 GT-VIRAEEKTENLYSSIDLVS 83
[39][TOP]
>UniRef100_Q1PKX8 Light repressed protein A-like protein n=1 Tax=uncultured
Prochlorococcus marinus clone ASNC2259
RepID=Q1PKX8_PROMA
Length = 194
Score = 58.2 bits (139), Expect = 4e-07
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI--RRCEVTLFTK 471
KNLEL+ +K++ E K+ K+ + +V+E D+ LS+ K PR+ + EVT+F
Sbjct: 8 KNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE-----KNPRVSFQTAEVTIFAN 62
Query: 472 KHGVVRAEEDAETVYACIDLVS 537
V+RAEE E +Y+ IDLVS
Sbjct: 63 GT-VIRAEEKTENLYSSIDLVS 83
[40][TOP]
>UniRef100_Q1PJW9 Light repressed protein A n=1 Tax=uncultured Prochlorococcus
marinus clone HF10-88F10 RepID=Q1PJW9_PROMA
Length = 194
Score = 58.2 bits (139), Expect = 4e-07
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI--RRCEVTLFTK 471
KNLEL+ +K++ E K+ K+ + +V+E D+ LS+ K PR+ + EVT+F
Sbjct: 8 KNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE-----KNPRVSFQTAEVTIFAN 62
Query: 472 KHGVVRAEEDAETVYACIDLVS 537
V+RAEE E +Y+ IDLVS
Sbjct: 63 GT-VIRAEEKTENLYSSIDLVS 83
[41][TOP]
>UniRef100_B9P0E9 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. MIT
9202 RepID=B9P0E9_PROMA
Length = 194
Score = 58.2 bits (139), Expect = 4e-07
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI--RRCEVTLFTK 471
KNLEL+ +K++ E K+ K+ + +V+E D+ LS+ K PR+ + EVT+F
Sbjct: 8 KNLELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE-----KNPRVSFQTAEVTIFAN 62
Query: 472 KHGVVRAEEDAETVYACIDLVS 537
V+RAEE E +Y+ IDLVS
Sbjct: 63 GT-VIRAEEKTENLYSSIDLVS 83
[42][TOP]
>UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc
punctiforme PCC 73102 RepID=B2IVM1_NOSP7
Length = 214
Score = 56.6 bits (135), Expect = 1e-06
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFT 468
KN+E+++ I+++V +K+ K+ + EVDV LSV + PRI + EVT++
Sbjct: 8 KNIEITDAIREYVHQKIEKAASHFQSITNEVDVHLSV-----ARNPRINTRQAAEVTIYA 62
Query: 469 KKHGVVRAEEDAETVYACIDLVS 537
V+RAEE +E +YA IDLV+
Sbjct: 63 -NGSVIRAEESSENLYASIDLVA 84
[43][TOP]
>UniRef100_A2BV60 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9515 RepID=A2BV60_PROM5
Length = 194
Score = 56.6 bits (135), Expect = 1e-06
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI--RRCEVTLFTK 471
KN+EL+ +K++ E K+ K+ + +V+E D+ LS+ K PR+ + EVT+F
Sbjct: 8 KNIELTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE-----KNPRLSYQTAEVTIFAS 62
Query: 472 KHGVVRAEEDAETVYACIDLVS 537
++RAEE E +Y+ IDLVS
Sbjct: 63 GT-IIRAEEKTENLYSSIDLVS 83
[44][TOP]
>UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE
Length = 224
Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFT 468
KN+E+++ I+ HV +K+ K+ L+ +VDV LSV+ PRI + EVT+F
Sbjct: 8 KNIEITDAIRSHVHQKIEKATAHFQTLINKVDVCLSVQ-----NNPRIAPKQTAEVTVFL 62
Query: 469 KKHGVVRAEEDAETVYACIDLVS 537
+ VVRAEE +E++YA ID+V+
Sbjct: 63 -NNVVVRAEESSESLYASIDMVT 84
[45][TOP]
>UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI
Length = 215
Score = 55.8 bits (133), Expect = 2e-06
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFT 468
KN+E+++ I ++V +K+ K+V L EVDV LSV + PRI + EVT++
Sbjct: 8 KNIEITDSIHEYVNQKIEKAVNHFQQLTTEVDVHLSV-----ARNPRINPKQTAEVTIYA 62
Query: 469 KKHGVVRAEEDAETVYACIDLVS 537
V+RA+E +E +YA IDLV+
Sbjct: 63 -NGTVIRAQESSENLYASIDLVA 84
[46][TOP]
>UniRef100_Q31CD8 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Prochlorococcus marinus str. MIT 9312
RepID=Q31CD8_PROM9
Length = 194
Score = 55.1 bits (131), Expect = 3e-06
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKH 477
KNLEL+ +K++ + K+ K+ + +V+E D+ LS+ E ++ EVT+F
Sbjct: 8 KNLELTGALKEYTQAKIEKATHHYKDIVKEADIHLSI---EKNPSVSLQTAEVTIFANGT 64
Query: 478 GVVRAEEDAETVYACIDLVS 537
V+RAEE E +Y+ IDLVS
Sbjct: 65 -VIRAEEKTENLYSSIDLVS 83
[47][TOP]
>UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-3-3Ab RepID=Q2JS19_SYNJA
Length = 191
Score = 55.1 bits (131), Expect = 3e-06
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFT 468
KN+E+++ I+ +V+EK+ ++V+ + + EVDV LSV + PRI + EVT++
Sbjct: 9 KNVEITDAIRSYVQEKIERAVKHFAQITSEVDVNLSV-----ARNPRISANQSAEVTVYA 63
Query: 469 KKHGVVRAEEDAETVYACIDLVS 537
V+RAEE +E +YA ID V+
Sbjct: 64 -NGTVIRAEESSENLYASIDRVA 85
[48][TOP]
>UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc
azollae' 0708 RepID=B9YPU1_ANAAZ
Length = 214
Score = 55.1 bits (131), Expect = 3e-06
Identities = 31/83 (37%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFT 468
KN+E+++ I+++V +K+ ++V + EV+V LSV + PRI + EVT++
Sbjct: 8 KNIEITDAIREYVHQKIERAVNHFQSITNEVNVHLSV-----ARNPRISTKQAAEVTIYA 62
Query: 469 KKHGVVRAEEDAETVYACIDLVS 537
V+RAEE +E +YA IDLV+
Sbjct: 63 -NGSVIRAEESSENLYASIDLVA 84
[49][TOP]
>UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB
Length = 190
Score = 54.7 bits (130), Expect = 4e-06
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI---RRCEVTLFT 468
KN+E+++ I+ +V+EK+ ++V + + EVDV LSV + PRI + EVT++
Sbjct: 9 KNVEITDAIRSYVQEKIERAVSHFAQITSEVDVNLSV-----ARNPRISASQSAEVTVYA 63
Query: 469 KKHGVVRAEEDAETVYACIDLVS 537
V+RAEE +E +YA ID V+
Sbjct: 64 -NGTVIRAEESSENLYASIDRVA 85
[50][TOP]
>UniRef100_B0JSS1 Light repressed protein A homolog n=1 Tax=Microcystis aeruginosa
NIES-843 RepID=B0JSS1_MICAN
Length = 199
Score = 54.7 bits (130), Expect = 4e-06
Identities = 32/79 (40%), Positives = 51/79 (64%)
Frame = +1
Query: 301 NLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHG 480
N+ ++EPI +VE+K+ K+V+ + + +VDV LSV + + P R EVT++
Sbjct: 9 NIAVTEPIHDYVEQKLEKAVKHFNGITTKVDVHLSVE--KNARIPDRHRAEVTVYA-NGT 65
Query: 481 VVRAEEDAETVYACIDLVS 537
V+RA+E +E +YA IDLVS
Sbjct: 66 VIRAQEGSENLYASIDLVS 84
[51][TOP]
>UniRef100_B9ND09 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9ND09_POPTR
Length = 75
Score = 54.7 bits (130), Expect = 4e-06
Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Frame = +1
Query: 343 KVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEV-----------TLFTKKHGVVR 489
K G+++QK HLVR VDVRL RGGE GKGPRIR+ + LF K +
Sbjct: 5 KYGQAIQKRCHLVRAVDVRLCFRGGEMGKGPRIRKEDAEKSKQVLIWCRQLFNKLRKIKD 64
Query: 490 AEEDAET 510
E D ET
Sbjct: 65 KESDHET 71
[52][TOP]
>UniRef100_Q7VDH9 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus
RepID=Q7VDH9_PROMA
Length = 195
Score = 53.5 bits (127), Expect = 1e-05
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI--RRCEVTLFTK 471
+NLEL+ ++++ + K+ K++ +V+E DV LSV K PR+ + EVT+F
Sbjct: 8 RNLELTPALREYTKSKLEKAIHHFGDMVKEADVHLSV-----AKNPRVPQQTAEVTVFA- 61
Query: 472 KHGVVRAEEDAETVYACIDLVS 537
V+RA+E ++ +YA IDLVS
Sbjct: 62 NGTVIRAQERSQNLYASIDLVS 83
[53][TOP]
>UniRef100_Q05SE1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916
RepID=Q05SE1_9SYNE
Length = 195
Score = 53.5 bits (127), Expect = 1e-05
Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI--RRCEVTLFTK 471
+NLE++ ++++ E K+ ++VQ + +V E DV LSV + PR+ + EVT+F
Sbjct: 8 RNLEVTAALREYTESKLERAVQHYDEMVVEADVHLSV-----ARNPRVPQQTAEVTVFA- 61
Query: 472 KHGVVRAEEDAETVYACIDLVS 537
V+RA+E +E +YA IDLV+
Sbjct: 62 NGTVIRAQERSENLYASIDLVA 83
[54][TOP]
>UniRef100_A3ZA02 Light repressed protein A-like protein n=1 Tax=Synechococcus sp.
RS9917 RepID=A3ZA02_9SYNE
Length = 195
Score = 53.5 bits (127), Expect = 1e-05
Identities = 31/83 (37%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI--RRCEVTLFTK 471
+NLEL+ ++ + + K+ ++VQ +V+E DV LSV + PR+ + EVT+F
Sbjct: 8 RNLELTPALRDYTQSKLERAVQHFDDMVKEADVHLSV-----ARNPRVPQQTAEVTVFA- 61
Query: 472 KHGVVRAEEDAETVYACIDLVST 540
V+RA+E +E +YA IDLV++
Sbjct: 62 NGTVIRAQERSENLYASIDLVAS 84
[55][TOP]
>UniRef100_A3YVD7 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. WH
5701 RepID=A3YVD7_9SYNE
Length = 195
Score = 53.5 bits (127), Expect = 1e-05
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Frame = +1
Query: 298 KNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGKGPRI--RRCEVTLFTK 471
+NL+++ I+ + E K+G+++ + LV+E DV LSV + PR+ + EVT+F
Sbjct: 8 RNLDVTPAIRDYTEAKLGRAINHYEGLVKEADVHLSV-----ARNPRVAQQTAEVTVFA- 61
Query: 472 KHGVVRAEEDAETVYACIDLVS 537
V+RA+E +E +YA ID+V+
Sbjct: 62 NGVVIRAQERSENLYASIDMVA 83