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[1][TOP]
>UniRef100_Q9FPH1 At1g64860 n=1 Tax=Arabidopsis thaliana RepID=Q9FPH1_ARATH
Length = 502
Score = 192 bits (489), Expect(2) = 2e-48
Identities = 98/102 (96%), Positives = 99/102 (97%)
Frame = +2
Query: 2 SWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAASDVSSG 181
SWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKA SDVSSG
Sbjct: 125 SWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAVSDVSSG 184
Query: 182 KQVRGYVTGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSSLQ 307
KQVRGYV GVISEDVLSHVEVVRLSKKIKSGLRLDDHKS L+
Sbjct: 185 KQVRGYVKGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSRLK 226
Score = 23.9 bits (50), Expect(2) = 2e-48
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +1
Query: 298 KLAVSMKISRAEL 336
+LAVS+KISRAEL
Sbjct: 237 QLAVSLKISRAEL 249
[2][TOP]
>UniRef100_O24629 AT1G64860 protein n=2 Tax=Arabidopsis thaliana RepID=O24629_ARATH
Length = 502
Score = 192 bits (489), Expect(2) = 2e-48
Identities = 98/102 (96%), Positives = 99/102 (97%)
Frame = +2
Query: 2 SWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAASDVSSG 181
SWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKA SDVSSG
Sbjct: 125 SWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAVSDVSSG 184
Query: 182 KQVRGYVTGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSSLQ 307
KQVRGYV GVISEDVLSHVEVVRLSKKIKSGLRLDDHKS L+
Sbjct: 185 KQVRGYVKGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSRLK 226
Score = 23.9 bits (50), Expect(2) = 2e-48
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +1
Query: 298 KLAVSMKISRAEL 336
+LAVS+KISRAEL
Sbjct: 237 QLAVSLKISRAEL 249
[3][TOP]
>UniRef100_O22576 RNA polymerase sigma subunit 1 n=1 Tax=Arabidopsis thaliana
RepID=O22576_ARATH
Length = 502
Score = 191 bits (485), Expect(2) = 5e-48
Identities = 97/102 (95%), Positives = 98/102 (96%)
Frame = +2
Query: 2 SWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAASDVSSG 181
SWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKA SDVSSG
Sbjct: 125 SWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAVSDVSSG 184
Query: 182 KQVRGYVTGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSSLQ 307
KQVRGYV GVISEDVLSH EVVRLSKKIKSGLRLDDHKS L+
Sbjct: 185 KQVRGYVKGVISEDVLSHAEVVRLSKKIKSGLRLDDHKSRLK 226
Score = 23.9 bits (50), Expect(2) = 5e-48
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +1
Query: 298 KLAVSMKISRAEL 336
+LAVS+KISRAEL
Sbjct: 237 QLAVSLKISRAEL 249
[4][TOP]
>UniRef100_O22057 Plastid RNA polymerase sigma-subunit n=1 Tax=Arabidopsis thaliana
RepID=O22057_ARATH
Length = 502
Score = 190 bits (483), Expect(2) = 8e-48
Identities = 97/102 (95%), Positives = 98/102 (96%)
Frame = +2
Query: 2 SWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAASDVSSG 181
SWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISAR RRIGAKKKTNMTHVKA SDVSSG
Sbjct: 125 SWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARPRRIGAKKKTNMTHVKAVSDVSSG 184
Query: 182 KQVRGYVTGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSSLQ 307
KQVRGYV GVISEDVLSHVEVVRLSKKIKSGLRLDDHKS L+
Sbjct: 185 KQVRGYVKGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSRLK 226
Score = 23.9 bits (50), Expect(2) = 8e-48
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +1
Query: 298 KLAVSMKISRAEL 336
+LAVS+KISRAEL
Sbjct: 237 QLAVSLKISRAEL 249
[5][TOP]
>UniRef100_O49935 Sig1 protein n=1 Tax=Sinapis alba RepID=O49935_SINAL
Length = 481
Score = 112 bits (281), Expect(2) = 3e-24
Identities = 67/101 (66%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
Frame = +2
Query: 5 WNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAASDVS-SG 181
WNLSFEK +KK+PV TCSGISARQRRIGAKKKTN VKA S+V+
Sbjct: 120 WNLSFEKT------------RKKVPV-TCSGISARQRRIGAKKKTN---VKAVSEVNFQN 163
Query: 182 KQVRGYVTGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSSL 304
V+GYV GVIS+ VLSH EVVRLSKKIKSGLRLD+HKS L
Sbjct: 164 NLVKGYVKGVISDHVLSHAEVVRLSKKIKSGLRLDEHKSRL 204
Score = 22.7 bits (47), Expect(2) = 3e-24
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +1
Query: 298 KLAVSMKISRAEL 336
+LA+S+KISRAEL
Sbjct: 216 QLAMSLKISRAEL 228
[6][TOP]
>UniRef100_B9I6T5 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I6T5_POPTR
Length = 499
Score = 98.2 bits (243), Expect = 2e-19
Identities = 57/104 (54%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Frame = +2
Query: 5 WNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAASDVSSG- 181
WNLSFE SS+ K + KKIPV TCSG+SARQRR+ K+K N K SD+S G
Sbjct: 124 WNLSFESINSSDSKIKKS--NKKIPV-TCSGVSARQRRLNNKRK-NQNQSKFMSDISPGL 179
Query: 182 --KQVRGYVTGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSSLQ 307
+++GYV GV+S++VL H EVVRLS+ I++GL L+DHKSSL+
Sbjct: 180 LLNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSLEDHKSSLK 223
[7][TOP]
>UniRef100_B9SDF8 RNA polymerase sigma factor rpoD, putative n=1 Tax=Ricinus communis
RepID=B9SDF8_RICCO
Length = 508
Score = 94.7 bits (234), Expect(2) = 2e-18
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 13/114 (11%)
Frame = +2
Query: 5 WNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAASDVSSGK 184
WNLSFE+ SS+ P + + +KKIPV TCSG+SARQRRI ++K N++ K + K
Sbjct: 123 WNLSFERTDSSDSPSRKS--QKKIPV-TCSGVSARQRRINIRRK-NLSQSKFTVQANVFK 178
Query: 185 QVR-------------GYVTGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSSLQ 307
Q++ GYV GV+SE++LSH EVVRLS+ IK+GL L+DHKS L+
Sbjct: 179 QLKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLK 232
Score = 21.2 bits (43), Expect(2) = 2e-18
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1
Query: 298 KLAVSMKISRAEL 336
++A S+KISRAEL
Sbjct: 243 QVATSLKISRAEL 255
[8][TOP]
>UniRef100_UPI0001984E9A PREDICTED: hypothetical protein isoform 2 n=1 Tax=Vitis vinifera
RepID=UPI0001984E9A
Length = 496
Score = 90.1 bits (222), Expect = 7e-17
Identities = 49/105 (46%), Positives = 70/105 (66%), Gaps = 4/105 (3%)
Frame = +2
Query: 5 WNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKT----NMTHVKAASDV 172
WNLSFE+ E G ++K +TCSG SARQRRI +K+ + + V+AA V
Sbjct: 118 WNLSFEEEEEEEEEDMGKKARQKRREVTCSGTSARQRRISGRKRVMNEKSKSRVRAALGV 177
Query: 173 SSGKQVRGYVTGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSSLQ 307
+ +++GYV GV+SE++L+H +VV LS KIK+GL L+DHKS L+
Sbjct: 178 EN--RLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLK 220
[9][TOP]
>UniRef100_B9IPY1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IPY1_POPTR
Length = 509
Score = 87.0 bits (214), Expect = 6e-16
Identities = 53/114 (46%), Positives = 70/114 (61%), Gaps = 13/114 (11%)
Frame = +2
Query: 5 WNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAASDVSSGK 184
WNLSFE+ SS+ K KKIPV TCSG+SARQRR+ ++K N K S S K
Sbjct: 124 WNLSFERTNSSDSTSKKN--NKKIPV-TCSGVSARQRRVNNRRK-NQNQSKFMSQSSDFK 179
Query: 185 -------------QVRGYVTGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSSLQ 307
+++GYV GV+S++VL H EVVRLS+ I++GL +DHKS L+
Sbjct: 180 FLRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLK 233
[10][TOP]
>UniRef100_A7PAZ2 Chromosome chr16 scaffold_10, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PAZ2_VITVI
Length = 486
Score = 82.4 bits (202), Expect = 1e-14
Identities = 48/105 (45%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
Frame = +2
Query: 5 WNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKT----NMTHVKAASDV 172
WNLSF GT ++K +TCSG SARQRRI +K+ + + V+AA V
Sbjct: 118 WNLSFV----------GTKARQKRREVTCSGTSARQRRISGRKRVMNEKSKSRVRAALGV 167
Query: 173 SSGKQVRGYVTGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSSLQ 307
+ +++GYV GV+SE++L+H +VV LS KIK+GL L+DHKS L+
Sbjct: 168 EN--RLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLK 210
[11][TOP]
>UniRef100_UPI0001984E99 PREDICTED: hypothetical protein isoform 1 n=1 Tax=Vitis vinifera
RepID=UPI0001984E99
Length = 507
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/115 (42%), Positives = 70/115 (60%), Gaps = 14/115 (12%)
Frame = +2
Query: 5 WNLSF----------EKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKT----N 142
WNLSF E+ E G ++K +TCSG SARQRRI +K+ +
Sbjct: 119 WNLSFVGTVVGKEEEEEEEEEEEEDMGKKARQKRREVTCSGTSARQRRISGRKRVMNEKS 178
Query: 143 MTHVKAASDVSSGKQVRGYVTGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSSLQ 307
+ V+AA V + +++GYV GV+SE++L+H +VV LS KIK+GL L+DHKS L+
Sbjct: 179 KSRVRAALGVEN--RLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLK 231
[12][TOP]
>UniRef100_Q9SLX3 Sigma factor n=1 Tax=Nicotiana tabacum RepID=Q9SLX3_TOBAC
Length = 502
Score = 78.6 bits (192), Expect = 2e-13
Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 12/113 (10%)
Frame = +2
Query: 5 WNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAASDVSSGK 184
WNLS EKA+++E KK ITCSG SAR+RR+ +K+ + A SD SS +
Sbjct: 120 WNLSAEKAMTNEN------NCKKKMQITCSGTSARRRRMDTRKRDLLPKNSATSDSSSKR 173
Query: 185 ------------QVRGYVTGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSSLQ 307
+ +GY+ GV+ +++L+H EVV+LSKKIK GL L++ KS L+
Sbjct: 174 LRSVIGPELLQNRSKGYINGVVGQELLTHTEVVQLSKKIKFGLYLEEQKSRLK 226
[13][TOP]
>UniRef100_Q9SLX4 Sigma factor n=1 Tax=Nicotiana tabacum RepID=Q9SLX4_TOBAC
Length = 508
Score = 72.4 bits (176), Expect = 1e-11
Identities = 44/114 (38%), Positives = 70/114 (61%), Gaps = 13/114 (11%)
Frame = +2
Query: 5 WNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAASDVSSGK 184
WNLS E+ +++ + +K K ITCSG SAR+RR+ ++++ H +A+ S+ K
Sbjct: 123 WNLSLEQTLTASPQHE---KKSKKMHITCSGTSARRRRMDSRQRVLDRH-SSATPTSAAK 178
Query: 185 QVR-------------GYVTGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSSLQ 307
+R GYV GV+SE++L+H EV++LSKKI+ GL L++ KS L+
Sbjct: 179 PLRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLK 232
[14][TOP]
>UniRef100_Q9ZTI3 RNA polymerase sigma factor 1 (Fragment) n=1 Tax=Zea mays
RepID=Q9ZTI3_MAIZE
Length = 398
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Frame = +2
Query: 5 WNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAASDVSSGK 184
W L FE +S+E + + V+ SG+SARQRR+ +++ K+ +
Sbjct: 25 WELPFEDDISTEDEDE-----RSTVVVARSGVSARQRRMSGRRRGAFVGRKSVTVSPELM 79
Query: 185 QVRG--YVTGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSSLQ 307
Q R Y+ G +S+D+L+H +VV+LS+KIK G+ L +S L+
Sbjct: 80 QSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLK 122
[15][TOP]
>UniRef100_B4FP19 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FP19_MAIZE
Length = 496
Score = 57.8 bits (138), Expect = 4e-07
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Frame = +2
Query: 5 WNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAASDVSSGK 184
W L FE +SS ++ V+ SG+SARQRR+ +++ + K+ +
Sbjct: 120 WELPFEDDISSTEDEDED--ERSTVVVARSGVSARQRRMSGRRRGAVVGRKSVTVSPELM 177
Query: 185 QVRG--YVTGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSSLQ 307
Q R Y+ G +S+D+L+H +VV+LS+KIK G+ L +S L+
Sbjct: 178 QSRNRIYLRGTVSKDLLTHKQVVQLSRKIKDGIWLQHQRSKLK 220
[16][TOP]
>UniRef100_O24348 Plastid RNA polymerase sigma factor n=1 Tax=Sorghum bicolor
RepID=O24348_SORBI
Length = 500
Score = 53.5 bits (127), Expect = 7e-06
Identities = 28/80 (35%), Positives = 47/80 (58%)
Frame = +2
Query: 68 KKIPVITCSGISARQRRIGAKKKTNMTHVKAASDVSSGKQVRGYVTGVISEDVLSHVEVV 247
K V+ SG+SARQRR+ +++ S + R Y+ G +S+D+L+H +V+
Sbjct: 145 KAAVVVARSGVSARQRRMSGRRRGPGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVI 204
Query: 248 RLSKKIKSGLRLDDHKSSLQ 307
+LS+KIK G+ L +S L+
Sbjct: 205 QLSRKIKDGIWLQHQRSKLK 224
[17][TOP]
>UniRef100_C5YHG2 Putative uncharacterized protein Sb07g004340 n=1 Tax=Sorghum
bicolor RepID=C5YHG2_SORBI
Length = 500
Score = 53.5 bits (127), Expect = 7e-06
Identities = 28/80 (35%), Positives = 47/80 (58%)
Frame = +2
Query: 68 KKIPVITCSGISARQRRIGAKKKTNMTHVKAASDVSSGKQVRGYVTGVISEDVLSHVEVV 247
K V+ SG+SARQRR+ +++ S + R Y+ G +S+D+L+H +V+
Sbjct: 145 KAAVVVARSGVSARQRRMSGRRRGPGRKSVTVSPELMQSRNRIYLRGTVSKDLLTHKQVI 204
Query: 248 RLSKKIKSGLRLDDHKSSLQ 307
+LS+KIK G+ L +S L+
Sbjct: 205 QLSRKIKDGIWLQHQRSKLK 224