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[1][TOP]
>UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis
thaliana RepID=Q9FLV3_ARATH
Length = 365
Score = 332 bits (850), Expect = 2e-89
Identities = 166/166 (100%), Positives = 166/166 (100%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI
Sbjct: 200 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 259
Query: 461 EPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQN 282
EPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQN
Sbjct: 260 EPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQN 319
Query: 281 EETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLNEHSFAE 144
EETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLNEHSFAE
Sbjct: 320 EETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLNEHSFAE 365
[2][TOP]
>UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9SEK8_RICCO
Length = 311
Score = 243 bits (621), Expect = 8e-63
Identities = 122/166 (73%), Positives = 141/166 (84%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
LFTKKHGV+RAEEDAET+YA IDLVS+IIQRKLRKIKEK SDHGRHMKGFNRLKVREPV
Sbjct: 149 LFTKKHGVIRAEEDAETIYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVA 208
Query: 461 EPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQN 282
EPV +D D D +G+E+E D I E+VRTK F+MPPLTV+EA+EQL+ V HDFYGF+N
Sbjct: 209 EPVKDDT-DEVDGVLGDEDE--DYIDEVVRTKYFDMPPLTVSEAIEQLKNVDHDFYGFRN 265
Query: 281 EETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLNEHSFAE 144
EETGEINI+YKRK GGYG+IIPK++GKAEK+EP+ E E S AE
Sbjct: 266 EETGEINIIYKRKAGGYGIIIPKENGKAEKLEPVVIEPAREPSIAE 311
[3][TOP]
>UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR
Length = 231
Score = 234 bits (597), Expect = 5e-60
Identities = 116/166 (69%), Positives = 140/166 (84%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
LFTK+HGVVRAEEDAET++A IDLVS+IIQRKLRKIK+K+SDHGRHMKGFNRLKVREP+
Sbjct: 71 LFTKRHGVVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMH 130
Query: 461 EPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQN 282
+ VVED D ++E++D I+E+VRTK F+MPPLTV+EA+EQLE V HDFYGF++
Sbjct: 131 QVVVEDDADEVS-----QQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRD 185
Query: 281 EETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLNEHSFAE 144
EETGEINI+YKRK GGYGLIIPK +G+AE++EPL E E S AE
Sbjct: 186 EETGEINIIYKRKAGGYGLIIPKGNGEAERLEPLVVEPAREPSLAE 231
[4][TOP]
>UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PHY3_POPTR
Length = 306
Score = 234 bits (597), Expect = 5e-60
Identities = 116/166 (69%), Positives = 140/166 (84%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
LFTK+HGVVRAEEDAET++A IDLVS+IIQRKLRKIK+K+SDHGRHMKGFNRLKVREP+
Sbjct: 146 LFTKRHGVVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMH 205
Query: 461 EPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQN 282
+ VVED D ++E++D I+E+VRTK F+MPPLTV+EA+EQLE V HDFYGF++
Sbjct: 206 QVVVEDDADEVS-----QQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRD 260
Query: 281 EETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLNEHSFAE 144
EETGEINI+YKRK GGYGLIIPK +G+AE++EPL E E S AE
Sbjct: 261 EETGEINIIYKRKAGGYGLIIPKGNGEAERLEPLVVEPAREPSLAE 306
[5][TOP]
>UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR
Length = 306
Score = 230 bits (586), Expect = 9e-59
Identities = 116/166 (69%), Positives = 137/166 (82%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
LFT +HGVVRAEEDAET+YA IDLVS+IIQRKLRKIKEK+SDHGRHMKGFNRLKVREPV
Sbjct: 147 LFTNRHGVVRAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVREPVP 206
Query: 461 EPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQN 282
+ V D ++ + ++E +D I+E+VRTK F+MPPLTV+EA+EQLE V HDFYGF+N
Sbjct: 207 QVVEGDADEVS------QQEVEDSIEEVVRTKFFDMPPLTVSEAIEQLENVDHDFYGFRN 260
Query: 281 EETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLNEHSFAE 144
EETGEINIVYKRK GGYGLIIPK + +AE++EPL E E S AE
Sbjct: 261 EETGEINIVYKRKAGGYGLIIPKGNDEAERLEPLVVEPARESSLAE 306
[6][TOP]
>UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum
RepID=Q672Q2_SOLLC
Length = 311
Score = 229 bits (585), Expect = 1e-58
Identities = 112/166 (67%), Positives = 134/166 (80%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
LFTKKHGV+RAEED E++Y ID+VS+IIQRKLRKIKEKDSD GRHMKGF+RLKVR+P
Sbjct: 146 LFTKKHGVIRAEEDGESIYGSIDMVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVRDPEA 205
Query: 461 EPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQN 282
V ED+E + E+++ D + E+VR K+F+MPPL+V EA+EQLE V HDFYGF+N
Sbjct: 206 LLVQEDLETLSQEEEVEDDKSDGFVTEVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRN 265
Query: 281 EETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLNEHSFAE 144
EETGEINIVY+RKEGGYGLIIPK+DGK EK+EPL E E S AE
Sbjct: 266 EETGEINIVYRRKEGGYGLIIPKEDGKTEKLEPLEVEPEKEPSIAE 311
[7][TOP]
>UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T7E3_SOYBN
Length = 291
Score = 229 bits (584), Expect = 1e-58
Identities = 118/166 (71%), Positives = 135/166 (81%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
LFTK+HGVVRAEEDAE+ Y IDLVS+IIQRKLRKIKEK SDHGRHMKGFNRLKVREPV
Sbjct: 132 LFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVE 191
Query: 461 EPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQN 282
+ VE+ E + +EE++ I E+VRTK F+MPPLTVAEA+EQLE V HDFYGF+N
Sbjct: 192 QLPVEEDE------ILSPQEEEESIDEVVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRN 245
Query: 281 EETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLNEHSFAE 144
EETGEINIVYKRKEGGYGLI+PK DG+AEK+EP+ E E S E
Sbjct: 246 EETGEINIVYKRKEGGYGLIVPKGDGEAEKLEPVVLEPAIESSLKE 291
[8][TOP]
>UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum
RepID=C9EFD1_SOLTU
Length = 280
Score = 228 bits (582), Expect = 3e-58
Identities = 110/159 (69%), Positives = 134/159 (84%), Gaps = 1/159 (0%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
LFTKKHGV+RAEEDAE++Y ID+VS+IIQRKLRKIKEKDSDHGRHMKGF+RLKVR+P +
Sbjct: 118 LFTKKHGVIRAEEDAESIYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEV 177
Query: 461 EPVVEDVED-STDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQ 285
V ED+E + V ++++ D + E+VR K+F+MPPL+V EA+EQLE V HDFYGF+
Sbjct: 178 LLVQEDLETLPQEEEVEDDDKSDGFVTEVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFR 237
Query: 284 NEETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQ 168
NEETGEINIVY+RKEGGYGLIIPK+DGK EK+EPL Q
Sbjct: 238 NEETGEINIVYRRKEGGYGLIIPKEDGKTEKLEPLEVNQ 276
[9][TOP]
>UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984F94
Length = 298
Score = 226 bits (575), Expect = 2e-57
Identities = 117/166 (70%), Positives = 136/166 (81%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
LFTKKHGVVRAEE AET+Y ID+VS+IIQRKLRKIKEKDSDHGRHMKGFNRLKVR+P
Sbjct: 139 LFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPET 198
Query: 461 EPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQN 282
P+VE+ D V ++E+ DLI EIVRTK F+MPPLTV EAVEQLE V HDF+GF+N
Sbjct: 199 -PLVEEEAD-----VVPQKEDGDLINEIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRN 252
Query: 281 EETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLNEHSFAE 144
EETGEINI+YKRK GGYGLIIPK++GK E++EP+ + E S AE
Sbjct: 253 EETGEINILYKRKAGGYGLIIPKENGKTEELEPVVVKSDREPSLAE 298
[10][TOP]
>UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QEV5_VITVI
Length = 230
Score = 226 bits (575), Expect = 2e-57
Identities = 117/166 (70%), Positives = 136/166 (81%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
LFTKKHGVVRAEE AET+Y ID+VS+IIQRKLRKIKEKDSDHGRHMKGFNRLKVR+P
Sbjct: 71 LFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPET 130
Query: 461 EPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQN 282
P+VE+ D V ++E+ DLI EIVRTK F+MPPLTV EAVEQLE V HDF+GF+N
Sbjct: 131 -PLVEEEAD-----VVPQKEDGDLINEIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRN 184
Query: 281 EETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLNEHSFAE 144
EETGEINI+YKRK GGYGLIIPK++GK E++EP+ + E S AE
Sbjct: 185 EETGEINILYKRKAGGYGLIIPKENGKTEELEPVVVKSDREPSLAE 230
[11][TOP]
>UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea
RepID=RR30_SPIOL
Length = 302
Score = 219 bits (559), Expect = 1e-55
Identities = 114/170 (67%), Positives = 136/170 (80%), Gaps = 4/170 (2%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
LFTK+HGV+RAEEDAE++Y+ IDLVS+IIQRKLRKIK+K SDHGRHMKGFNR KVR+P
Sbjct: 136 LFTKRHGVIRAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSDHGRHMKGFNRSKVRDP-- 193
Query: 461 EPV----VEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFY 294
EPV E +E+ + E+DD I+E+VRTK F+MPPLT+ EAVEQLE V HDFY
Sbjct: 194 EPVRITREEVLEEVESAPAPVSVEDDDFIEEVVRTKYFDMPPLTITEAVEQLENVDHDFY 253
Query: 293 GFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLNEHSFAE 144
F+NEETG+INI+YKRKEGGYGLIIP KDGK EK+E LP + + SFAE
Sbjct: 254 AFRNEETGDINILYKRKEGGYGLIIP-KDGKTEKLESLPVQTDKQPSFAE 302
[12][TOP]
>UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LMC5_PICSI
Length = 321
Score = 168 bits (425), Expect = 4e-40
Identities = 91/170 (53%), Positives = 120/170 (70%), Gaps = 12/170 (7%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
LFTKKHGVVRAEE+AET+YA ID+VS II+RKLRKIKEKD HGR K + K+ E ++
Sbjct: 149 LFTKKHGVVRAEEEAETIYASIDIVSDIIRRKLRKIKEKDGGHGRPSKMRKQPKLGE-LL 207
Query: 461 EPVVEDVEDSTDSSVGE--------EEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVS 306
VV DV+++ D + + E+ DDL E+VRTK FEMPP++ EA+EQL V
Sbjct: 208 STVVMDVKETRDKELDDLADVEEMRYEKIDDLSDEVVRTKYFEMPPMSPEEALEQLMNVD 267
Query: 305 HDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAE----KVEPLPTEQ 168
HDFY F+N E+GE+N++YKRK GGYGLI+PK + + E +V +P E+
Sbjct: 268 HDFYAFRNMESGEVNVLYKRKHGGYGLIVPKNNERWENPTMEVPEVPKER 317
[13][TOP]
>UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ
Length = 309
Score = 162 bits (410), Expect = 2e-38
Identities = 88/174 (50%), Positives = 123/174 (70%), Gaps = 9/174 (5%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
LFTK+HGV+RAEEDAE+ YA IDL S+II+RKLRKIKEK++D RH+KG + PV
Sbjct: 142 LFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEKETDV-RHLKG-----TKPPVS 195
Query: 461 E---PVVEDVEDSTDSSVGEEEE------EDDLIKEIVRTKTFEMPPLTVAEAVEQLELV 309
+ ++++ +D + + + EE ED ++ ++VRTK FEMPPL+V EA+EQL V
Sbjct: 196 DWPPSLLDNNDDDAQAQLKDLEEAVGAEDEDTVLTKVVRTKVFEMPPLSVEEAMEQLVNV 255
Query: 308 SHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLNEHSFA 147
H+FY F++E+TGE+N++YKRKEGG+GLI+PK DG K E +P + S A
Sbjct: 256 DHNFYAFRDEKTGEMNVLYKRKEGGFGLIVPKGDGHLHK-ETIPNSDHHHPSLA 308
[14][TOP]
>UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays
RepID=B6TYP8_MAIZE
Length = 309
Score = 162 bits (409), Expect = 3e-38
Identities = 88/156 (56%), Positives = 112/156 (71%), Gaps = 1/156 (0%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPV- 465
LFTK+HGV+RAEEDAE+ YA IDL + I++RKLRKIKEK+++ R P
Sbjct: 133 LFTKRHGVLRAEEDAESTYASIDLAAAIVKRKLRKIKEKETEVRRGGDADGVWDEIPPAD 192
Query: 464 IEPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQ 285
+ P E D +++VG E+EE L K +VRTK FEMPPLTV EA+EQLE V HDFY F+
Sbjct: 193 LLPPAE--ADDLEAAVGAEDEETVLAK-VVRTKVFEMPPLTVEEALEQLENVDHDFYCFR 249
Query: 284 NEETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLP 177
+E TG++NI+Y+RKEGGYGLIIPK DGK + V +P
Sbjct: 250 DEATGQVNILYRRKEGGYGLIIPKNDGKVDTVGVVP 285
[15][TOP]
>UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum
bicolor RepID=C5WRX8_SORBI
Length = 310
Score = 158 bits (399), Expect = 4e-37
Identities = 88/179 (49%), Positives = 125/179 (69%), Gaps = 3/179 (1%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
LF+K+HGV+RAEEDAE+ YA IDL + II+RKLRKIKEK+++ R G E +
Sbjct: 133 LFSKRHGVLRAEEDAESTYASIDLAAAIIKRKLRKIKEKETEVRRDGDGGAGGAWEEEL- 191
Query: 461 EPVVED--VE-DSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYG 291
P+++D VE D ++VG E+E+ ++ ++VRTK FEMPPLTV EA+EQL+ V H+FY
Sbjct: 192 -PLLDDDLVEADELAAAVGAEDEQT-VVAKVVRTKVFEMPPLTVEEALEQLDNVGHNFYC 249
Query: 290 FQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLNEHSFAE*TASAHTKTD 114
F++E TG++NI+Y+RKEGGYGLIIPK+DG + + + Q + E + + HT D
Sbjct: 250 FRDEATGQVNILYRRKEGGYGLIIPKEDGNFDNKDTVGVAQPPPPAAPEPSLAVHTAAD 308
[16][TOP]
>UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWK9_PHYPA
Length = 221
Score = 151 bits (381), Expect = 5e-35
Identities = 81/145 (55%), Positives = 102/145 (70%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
LFTKKHGVVRAEE+AE++YA ID VS +I RKLRKIKEKD HGR K + ++ E +
Sbjct: 71 LFTKKHGVVRAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPTKSRHSPRIGEVLS 130
Query: 461 EPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQN 282
+ VV+ D +G + DDL EIVRTK FEM P+ EA+EQL V HDFY F+N
Sbjct: 131 DEVVD-----LDPILGRKP--DDLPDEIVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRN 183
Query: 281 EETGEINIVYKRKEGGYGLIIPKKD 207
E+GEINI+YKR GGYG+I+P+ +
Sbjct: 184 VESGEINILYKRTHGGYGIIVPRNE 208
[17][TOP]
>UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TA00_PHYPA
Length = 297
Score = 148 bits (374), Expect = 3e-34
Identities = 81/145 (55%), Positives = 99/145 (68%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
LFTKKHGVVRAEE+AE++YA ID VS +I RKLRKIKEKD HGR K R+ V+
Sbjct: 149 LFTKKHGVVRAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPAKYSPRIG---EVL 205
Query: 461 EPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQN 282
V D++ E + DDL E+VRTK FEM P+ EA+EQL V HDFY F+N
Sbjct: 206 SNEVVDLDPIL------ERKPDDLPDEVVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRN 259
Query: 281 EETGEINIVYKRKEGGYGLIIPKKD 207
E+GEINI+YKR GGYG+I+P+ D
Sbjct: 260 VESGEINILYKRTHGGYGIIVPRND 284
[18][TOP]
>UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc
azollae' 0708 RepID=B9YPU1_ANAAZ
Length = 214
Score = 126 bits (317), Expect = 1e-27
Identities = 72/153 (47%), Positives = 93/153 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE +E +YA IDLV+ I R+LRK KE+ DH N V EPV
Sbjct: 66 VIRAEESSENLYASIDLVADKIARQLRKYKERRQDHKTQPIPTNEAVVAEPV-------- 117
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
DS +G+ E L E+VRTK F MPP+T+AEA EQL+LV HDFY F+N ETGEIN
Sbjct: 118 ---ADSLIGDRTPE--LPGEVVRTKYFPMPPMTLAEAQEQLQLVGHDFYMFRNAETGEIN 172
Query: 260 IVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLN 162
++Y+R GGYG+I P+ + + T+Q N
Sbjct: 173 VIYERNHGGYGVIQPRNGNRHTNGKNGKTDQGN 205
[19][TOP]
>UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP
Length = 213
Score = 124 bits (311), Expect = 7e-27
Identities = 66/136 (48%), Positives = 86/136 (63%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE +E +YA IDLV+ I R+LRK KE+ D + N++ V EPV ++ D
Sbjct: 66 VIRAEESSENLYASIDLVADKIARQLRKYKERLQDQKTNAPPTNQVLVPEPVAADLIGD- 124
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+L E+VRTK F MPP+TVAEA EQL+LV HDFY F N ETGEIN
Sbjct: 125 ------------RTPELPNEVVRTKYFSMPPMTVAEATEQLQLVGHDFYMFHNAETGEIN 172
Query: 260 IVYKRKEGGYGLIIPK 213
++Y+R GGYG+I P+
Sbjct: 173 VIYERNHGGYGVIQPR 188
[20][TOP]
>UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4
Length = 209
Score = 122 bits (307), Expect = 2e-26
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 1/142 (0%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIE-PVVED 444
V+RAEE +E +YA IDLVS I R+LRK KE+ D K EPV+ P+V D
Sbjct: 66 VIRAEESSENLYASIDLVSDKIARQLRKFKERRQDKHSRSK-------EEPVVSVPLVTD 118
Query: 443 VEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEI 264
+ + +L +E+VRTK F MPP+T+ EA+EQLELV HDFY F+N ETGEI
Sbjct: 119 LTG---------DRTPELPEEVVRTKYFAMPPMTLREALEQLELVDHDFYMFRNAETGEI 169
Query: 263 NIVYKRKEGGYGLIIPKKDGKA 198
N++Y+R GGYG+I P+ A
Sbjct: 170 NVIYERNHGGYGVIQPRNGSSA 191
[21][TOP]
>UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YSA5_ANASP
Length = 213
Score = 122 bits (305), Expect = 3e-26
Identities = 68/152 (44%), Positives = 90/152 (59%), Gaps = 8/152 (5%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE +E +YA IDLV+ I R+LRK KE+ D + V E V+ ++ D
Sbjct: 66 VIRAEESSENLYASIDLVADKISRQLRKYKERKQDQKTQAQPTTETIVPETVVADLIGD- 124
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+L +E+VRTK F MPP+TV EA+EQL+LV HDFY F N ETGEIN
Sbjct: 125 ------------RTPELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFYMFHNAETGEIN 172
Query: 260 IVYKRKEGGYGLIIPK--------KDGKAEKV 189
++Y+R GGYG+I P+ K+GKA V
Sbjct: 173 VIYERNHGGYGVIQPRNNNGHTNGKNGKAHHV 204
[22][TOP]
>UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DKM6_THEEB
Length = 209
Score = 122 bits (305), Expect = 3e-26
Identities = 74/168 (44%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEP-VVED 444
V+RAEE +E +YA IDLV+ I RKLRK+KEK D +R K V+EP VV D
Sbjct: 66 VIRAEESSENLYASIDLVADKIARKLRKLKEKRQDK-------SRAKDTNSVVEPEVVTD 118
Query: 443 VEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEI 264
+ VG+ + L +++VR K F MPP+T+ EA+E LE+V HDFY F+N +TGEI
Sbjct: 119 L-------VGDRTPQ--LPEQVVRMKYFAMPPMTIQEALEHLEMVDHDFYVFRNRDTGEI 169
Query: 263 NIVYKRKEGGYGLIIPKKDGKAEKVEPLPTEQLNEHSFAE*TASAHTK 120
N+VY+R GGYG+I +P PT + H+ A+ A A K
Sbjct: 170 NVVYERNHGGYGVI-----------QPRPTSNNHHHNTADAAAKATAK 206
[23][TOP]
>UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT
Length = 213
Score = 119 bits (298), Expect = 2e-25
Identities = 63/138 (45%), Positives = 84/138 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE +E +YA IDLV+ I R+LRK KE+ D V E V+ ++ D
Sbjct: 66 VIRAEESSENLYASIDLVADKISRQLRKYKERKQDQKTQALPTTETIVPETVVADLIGD- 124
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+L +E+VRTK F MPP+TV EA+EQL+LV HDFY F N ETGEIN
Sbjct: 125 ------------RTPELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFYMFHNAETGEIN 172
Query: 260 IVYKRKEGGYGLIIPKKD 207
++Y+R GGYG+I P+ +
Sbjct: 173 VIYERNHGGYGVIQPRNN 190
[24][TOP]
>UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc
punctiforme PCC 73102 RepID=B2IVM1_NOSP7
Length = 214
Score = 118 bits (296), Expect = 4e-25
Identities = 66/136 (48%), Positives = 87/136 (63%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE +E +YA IDLV+ I R+LRK KE+ D + V E VV D+
Sbjct: 66 VIRAEESSENLYASIDLVADKIARQLRKYKERRQDQKTQSQ-----PTEVVVAESVVPDL 120
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+G+ E L E+VRTK F MPP+T+AEA+EQL+LV HDFY F+N ETGEIN
Sbjct: 121 -------IGDRTPE--LPNEVVRTKYFSMPPMTLAEALEQLQLVGHDFYMFRNSETGEIN 171
Query: 260 IVYKRKEGGYGLIIPK 213
++Y+R GGYG+I P+
Sbjct: 172 VIYERNHGGYGVIHPR 187
[25][TOP]
>UniRef100_A9PJW3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJW3_9ROSI
Length = 268
Score = 118 bits (295), Expect = 5e-25
Identities = 57/88 (64%), Positives = 74/88 (84%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
LFTK+HGVVRAEEDAET+YA IDL S+IIQRKLRKIK+K+SDHGRHMKGFNRLKVREP+
Sbjct: 146 LFTKRHGVVRAEEDAETIYASIDLASSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMH 205
Query: 461 EPVVEDVEDSTDSSVGEEEEEDDLIKEI 378
+ V +D ++ + ++E++D I+E+
Sbjct: 206 QVVEDDADEVS------QQEDEDYIEEV 227
[26][TOP]
>UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-3-3Ab RepID=Q2JS19_SYNJA
Length = 191
Score = 117 bits (293), Expect = 8e-25
Identities = 64/136 (47%), Positives = 85/136 (62%), Gaps = 1/136 (0%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHG-RHMKGFNRLKVREPVIEPVVED 444
V+RAEE +E +YA ID V+ + RKLRK KE++ H RH + ++P+ +P+
Sbjct: 67 VIRAEESSENLYASIDRVADKLARKLRKYKERNGVHRIRHSPKTSVAVAQQPLTDPL--- 123
Query: 443 VEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEI 264
E + +L E+VRTK F MPP+TV EA+ QLELV HDFY F+N E GEI
Sbjct: 124 ----------NTERQAELPPEVVRTKYFAMPPMTVQEALHQLELVDHDFYVFRNIENGEI 173
Query: 263 NIVYKRKEGGYGLIIP 216
N++Y RK GGYGLI P
Sbjct: 174 NVIYVRKHGGYGLIRP 189
[27][TOP]
>UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB
Length = 190
Score = 117 bits (293), Expect = 8e-25
Identities = 64/137 (46%), Positives = 85/137 (62%), Gaps = 1/137 (0%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHG-RHMKGFNRLKVREPVIEPVVED 444
V+RAEE +E +YA ID V+ + RKLRK KE++ H RH + ++PV +P+
Sbjct: 67 VIRAEESSENLYASIDRVADKLARKLRKYKERNGIHRVRHTPKTSVAVAQQPVTDPL--- 123
Query: 443 VEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEI 264
E + +L E+VRTK F MPP+TV EA+ QLELV HDFY F+N E GEI
Sbjct: 124 ----------NTERQAELPAEVVRTKYFAMPPMTVQEALHQLELVDHDFYVFRNIENGEI 173
Query: 263 NIVYKRKEGGYGLIIPK 213
N++Y R GGYGLI P+
Sbjct: 174 NVIYVRNHGGYGLIRPR 190
[28][TOP]
>UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group
RepID=C6YXL0_ORYSJ
Length = 321
Score = 117 bits (292), Expect = 1e-24
Identities = 67/159 (42%), Positives = 100/159 (62%), Gaps = 9/159 (5%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
LFTK+HGV+RAEEDAE+ YA IDL S+II+RKLRKIKEK++D RH+KG + PV
Sbjct: 142 LFTKRHGVIRAEEDAESTYASIDLASSIIKRKLRKIKEKETD-VRHLKG-----TKPPVS 195
Query: 461 E---PVVEDVEDSTDSSVGEEEE------EDDLIKEIVRTKTFEMPPLTVAEAVEQLELV 309
+ ++++ +D + + + EE ED ++ +VRTK FEMPPL+ EA+EQL
Sbjct: 196 DWPPSLLDNNDDDAQAQLKDLEEAVGAEDEDTVLTRVVRTKVFEMPPLSGEEAMEQLGNG 255
Query: 308 SHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEK 192
H F+ + G +++ G +G I+P+ DG ++
Sbjct: 256 DHTFHALPRRKNGGDEPPVQKEGGRFGPIVPQGDGPLQR 294
[29][TOP]
>UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YIH4_9CYAN
Length = 212
Score = 113 bits (282), Expect = 2e-23
Identities = 70/157 (44%), Positives = 100/157 (63%), Gaps = 7/157 (4%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLV+ I R+LRK K+K G+H+ +V E +PV+ED+
Sbjct: 66 VIRAQESSENLYASIDLVADKIARQLRKFKDKRQ--GKHLHPPKLAEVVEN--QPVIEDL 121
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+G+ + E L E+VRTK F MPP+ + +A+EQL+LV HDFY F N +TGE+N
Sbjct: 122 -------IGDRQPE--LPPEVVRTKYFAMPPMNLQDALEQLQLVDHDFYVFCNADTGELN 172
Query: 260 IVYKR-KEGGYGLIIPKK-----DGK-AEKVEPLPTE 171
++YKR GGYGLI P+ +GK A+ + LP E
Sbjct: 173 VIYKRVNHGGYGLIQPRNNNGHTNGKAAQSSQVLPQE 209
[30][TOP]
>UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0CDL4_ACAM1
Length = 212
Score = 112 bits (280), Expect = 3e-23
Identities = 60/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLK---VREPVIEPVV 450
V+RAEE +E +YA IDLV+ I R+LRK KEK G + KG NR K ++ P +P++
Sbjct: 66 VIRAEESSENLYASIDLVADKIARQLRKYKEKRQTKGPN-KGSNRSKAVALQTPEEQPLI 124
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
D+ + +L +E+VR K F + P++V +A+EQL+LV HDFY F+N +TG
Sbjct: 125 GDLT---------RDRAPELPEEVVRCKYFAISPMSVHDALEQLDLVDHDFYVFENADTG 175
Query: 269 EINIVYKRKEGGYGLIIPKK 210
++N++Y+R GGYG+I P++
Sbjct: 176 QLNVIYERNHGGYGVIQPRQ 195
[31][TOP]
>UniRef100_A3IRI7 Light repressed protein n=1 Tax=Cyanothece sp. CCY0110
RepID=A3IRI7_9CHRO
Length = 199
Score = 112 bits (280), Expect = 3e-23
Identities = 62/137 (45%), Positives = 87/137 (63%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLVS I R+LRK KEK ++H V+ P + P E
Sbjct: 66 VIRAQEGSENLYASIDLVSDKIARQLRKYKEKINNHKPQSS------VKSPDVLPETEVK 119
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
ED +G+ E E L E++R K F MPP+++ EA QLELV HDFY F+N++T EIN
Sbjct: 120 EDL----IGDREVE--LPPEVIRMKYFAMPPMSIEEAKHQLELVDHDFYMFRNQDTDEIN 173
Query: 260 IVYKRKEGGYGLIIPKK 210
++Y R GG+G+I P++
Sbjct: 174 VIYMRNHGGFGVIQPRE 190
[32][TOP]
>UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI
Length = 215
Score = 111 bits (278), Expect = 5e-23
Identities = 65/140 (46%), Positives = 89/140 (63%), Gaps = 1/140 (0%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLV+ I R+LRK KEK K + ++ +PVVE++
Sbjct: 66 VIRAQESSENLYASIDLVADKIARQLRKYKEKRQSKVNKTKTVDLIES-----QPVVENL 120
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+G+ + E L E+VRTK F MP +TV EA+EQL+L+ HDFY F N TGEIN
Sbjct: 121 -------IGDRQAE--LPSEVVRTKYFPMPSMTVEEALEQLQLIDHDFYMFSNGVTGEIN 171
Query: 260 IVYKR-KEGGYGLIIPKKDG 204
++YKR GGYGLI P+ +G
Sbjct: 172 VIYKRYHHGGYGLIQPRPNG 191
[33][TOP]
>UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Microcoleus chthonoplastes PCC 7420
RepID=B4VJW0_9CYAN
Length = 215
Score = 111 bits (278), Expect = 5e-23
Identities = 59/136 (43%), Positives = 82/136 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLV+ IQR+LRK KEK + + PV+E ++ D
Sbjct: 66 VIRAQESSEDLYASIDLVADKIQRQLRKYKEKQQKKTQTQPKTGAVIHEAPVVEDLIGD- 124
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+L E+VR K F MPP+T+ EA EQL+LV HDFY F+N +T EIN
Sbjct: 125 ------------RTPELPTEVVRMKYFAMPPMTIEEATEQLQLVDHDFYMFRNAKTDEIN 172
Query: 260 IVYKRKEGGYGLIIPK 213
++Y+R GGYG+I P+
Sbjct: 173 VIYERNHGGYGVIQPR 188
[34][TOP]
>UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7
Length = 207
Score = 111 bits (277), Expect = 6e-23
Identities = 69/150 (46%), Positives = 93/150 (62%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE E +YA IDLVS I R+L+K KEK D KG +L E + + D
Sbjct: 66 VIRAEECNENLYASIDLVSDKITRQLKKYKEKLRDR----KG--QLSTAETADQ--LSDG 117
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
TD G + E L ++IVRTK F MP +TV +A+ QL+LV HDFY F+N TGEIN
Sbjct: 118 ALVTDLLNGRQPE---LPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMFRNAATGEIN 174
Query: 260 IVYKRKEGGYGLIIPKKDGKAEKVEPLPTE 171
++Y+R GGYG+I P+ +G +EK + +E
Sbjct: 175 VIYERNHGGYGVIQPRPEGNSEKAVVVRSE 204
[35][TOP]
>UniRef100_B1WZE1 Light repressed protein n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WZE1_CYAA5
Length = 201
Score = 110 bits (275), Expect = 1e-22
Identities = 60/143 (41%), Positives = 87/143 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLVS I R+LRK KEK ++H K + V P V
Sbjct: 68 VIRAQEGSENLYASIDLVSDKIARQLRKYKEKINNH----------KPQSSVKNPEVLPE 117
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ +G+ E L E++R K F MPP+++ EA QLELV HDFY F+N++T EIN
Sbjct: 118 REIEKDLIGDREAA--LPPEVIRMKYFAMPPMSIEEAKHQLELVDHDFYMFRNQDTDEIN 175
Query: 260 IVYKRKEGGYGLIIPKKDGKAEK 192
++Y R GG+G+I P++ + +K
Sbjct: 176 VIYMRNHGGFGVIQPREPNENDK 198
[36][TOP]
>UniRef100_A8YEZ8 LrtA protein n=1 Tax=Microcystis aeruginosa PCC 7806
RepID=A8YEZ8_MICAE
Length = 199
Score = 110 bits (275), Expect = 1e-22
Identities = 61/136 (44%), Positives = 88/136 (64%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLVS I R+LRK KE+ DH H + +K E V E ++D
Sbjct: 66 VIRAQEGSENLYASIDLVSDKIARQLRKYKERLVDHRTH----STVKTSEVVQEKPLDD- 120
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ +G+ E L E+VR K F MPP+T+ EA+ QL+LV HDF+ F N++T EIN
Sbjct: 121 -----NLIGDRTPE--LPAEVVRMKYFAMPPMTIEEALTQLQLVDHDFFMFCNKDTNEIN 173
Query: 260 IVYKRKEGGYGLIIPK 213
++Y+R GG+G+I P+
Sbjct: 174 VIYQRNHGGFGVIQPR 189
[37][TOP]
>UniRef100_P47908 Light repressed protein A n=1 Tax=Synechococcus sp. PCC 7002
RepID=LRTA_SYNP2
Length = 193
Score = 110 bits (274), Expect = 1e-22
Identities = 63/136 (46%), Positives = 85/136 (62%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLVS I R+LRK KEK+ H V+E E + ED
Sbjct: 66 VIRAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTH--------VQEKTSEVLPED- 116
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
D+ +G+ E L E+VR K F MPP+T+ EA+EQL+LV HDFY F N++T IN
Sbjct: 117 -PVPDNLIGDRAPE--LPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAIN 173
Query: 260 IVYKRKEGGYGLIIPK 213
++Y R GGYG+I P+
Sbjct: 174 VIYIRNHGGYGVIQPR 189
[38][TOP]
>UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus
PCC 6301 RepID=Q5N179_SYNP6
Length = 207
Score = 109 bits (273), Expect = 2e-22
Identities = 68/150 (45%), Positives = 93/150 (62%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE E +YA IDLVS I R+L+K KE+ D KG +L E + + D
Sbjct: 66 VIRAEECNENLYASIDLVSDKITRQLKKYKEELRDR----KG--QLSTAETADQ--LSDG 117
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
TD G + E L ++IVRTK F MP +TV +A+ QL+LV HDFY F+N TGEIN
Sbjct: 118 ALVTDLLNGRQPE---LPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMFRNAATGEIN 174
Query: 260 IVYKRKEGGYGLIIPKKDGKAEKVEPLPTE 171
++Y+R GGYG+I P+ +G +EK + +E
Sbjct: 175 VIYERNHGGYGVIQPRPEGNSEKAVVVRSE 204
[39][TOP]
>UniRef100_C7QW97 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Cyanothece RepID=C7QW97_CYAP0
Length = 205
Score = 109 bits (273), Expect = 2e-22
Identities = 62/135 (45%), Positives = 86/135 (63%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E++YA IDLVS I R+LRK KEK ++ K N +KV E +E
Sbjct: 73 VIRAQEGSESLYASIDLVSDKIARQLRKYKEKLNNK----KAPNPVKVGEVTTATAIEG- 127
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+G+ E L E++R K F MPP+T+ EA+ QLELV HDFY F+N++T EIN
Sbjct: 128 -----DLIGDRTPE--LPAEVIRMKYFAMPPMTIDEALHQLELVDHDFYMFRNKDTDEIN 180
Query: 260 IVYKRKEGGYGLIIP 216
++Y+R GGYG+I P
Sbjct: 181 VIYQRNHGGYGVIQP 195
[40][TOP]
>UniRef100_Q4CAE1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Crocosphaera watsonii WH 8501 RepID=Q4CAE1_CROWT
Length = 199
Score = 108 bits (271), Expect = 3e-22
Identities = 59/137 (43%), Positives = 86/137 (62%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLVS I R+LRK KEK S+H K + P V
Sbjct: 66 VIRAQEGSENLYASIDLVSDKISRQLRKYKEKVSNH----------KPQSSAKLPEVLPE 115
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
++ ++ +G+ + E L E++R K F MP +++ EA QLELV HDFY F+N+ET EIN
Sbjct: 116 KEVSEDLIGDRQAE--LPPEVIRMKYFAMPSMSIEEAKHQLELVDHDFYMFRNQETEEIN 173
Query: 260 IVYKRKEGGYGLIIPKK 210
++Y R GG+G+I P++
Sbjct: 174 VIYMRNHGGFGIIQPRE 190
[41][TOP]
>UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA
Length = 212
Score = 108 bits (271), Expect = 3e-22
Identities = 63/138 (45%), Positives = 91/138 (65%), Gaps = 2/138 (1%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIE-PVVED 444
V+RA+E +E +YA IDLV+ I R+LRK KEK R K + K E V + P+V+D
Sbjct: 66 VIRAQESSENLYASIDLVADKIARQLRKYKEK-----RMAKQYQLPKTGEVVAQKPIVDD 120
Query: 443 VEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEI 264
+ +G+ + L +E+VRTK F MPP+++ EA+EQL+L+ HDFY F+N ET EI
Sbjct: 121 L-------IGDRTVK--LPEEVVRTKYFAMPPMSIQEALEQLQLIDHDFYMFRNAETDEI 171
Query: 263 NIVYKRK-EGGYGLIIPK 213
N++Y+R GGYG+I P+
Sbjct: 172 NVIYQRSHHGGYGVIQPR 189
[42][TOP]
>UniRef100_B0JSS1 Light repressed protein A homolog n=1 Tax=Microcystis aeruginosa
NIES-843 RepID=B0JSS1_MICAN
Length = 199
Score = 108 bits (269), Expect = 5e-22
Identities = 60/136 (44%), Positives = 83/136 (61%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLVS I R+LRK KE+ DH + PV V
Sbjct: 66 VIRAQEGSENLYASIDLVSDKIARQLRKYKERLVDH----------RTNAPVKTSEVVQE 115
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ S +G+ E L E+VR K F MPP+T+ EA+ QL+LV HDFY F N++T EIN
Sbjct: 116 KPLDGSLIGDRTPE--LPAEVVRMKYFAMPPMTIEEALTQLQLVDHDFYMFCNKDTNEIN 173
Query: 260 IVYKRKEGGYGLIIPK 213
++Y+R GG+G+I P+
Sbjct: 174 VIYQRNHGGFGVIQPR 189
[43][TOP]
>UniRef100_B7KLI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7424 RepID=B7KLI5_CYAP7
Length = 199
Score = 107 bits (268), Expect = 7e-22
Identities = 58/136 (42%), Positives = 88/136 (64%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLVS I R+LRK KE+ + H + +K E V + +E+
Sbjct: 66 VIRAQEGSENLYASIDLVSDKIARQLRKYKERKLEQNAH----SPVKAGEVVQQETIEE- 120
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ +G+ + E L E+VR K F MPP+++ EA+EQL+LV HDF+ F+N +T EIN
Sbjct: 121 -----NLIGDRQPE--LPPEVVRMKYFGMPPMSIDEALEQLQLVDHDFFMFRNRDTNEIN 173
Query: 260 IVYKRKEGGYGLIIPK 213
++Y R GG+G+I P+
Sbjct: 174 VIYIRNHGGFGVIQPR 189
[44][TOP]
>UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE
Length = 224
Score = 106 bits (265), Expect = 1e-21
Identities = 60/140 (42%), Positives = 84/140 (60%), Gaps = 2/140 (1%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEK--DSDHGRHMKGFNRLKVREPVIEPVVE 447
VVRAEE +E++YA ID+V+ + R+LRK KEK D DH + P I
Sbjct: 66 VVRAEESSESLYASIDMVTDKLTRQLRKYKEKRRDQDHATVRPTDVDATINAPDITSHNA 125
Query: 446 DVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
D+ + + + L +VR+K F MPP+TV A+E LELV HDFY F+N ETGE
Sbjct: 126 DISEVLN-------HQPKLPDTVVRSKYFAMPPMTVQTALENLELVGHDFYMFRNVETGE 178
Query: 266 INIVYKRKEGGYGLIIPKKD 207
IN++Y+R GYGL+ P+++
Sbjct: 179 INVIYERNHKGYGLLQPRQN 198
[45][TOP]
>UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC
6803 RepID=LRTA_SYNY3
Length = 191
Score = 105 bits (262), Expect = 3e-21
Identities = 59/135 (43%), Positives = 85/135 (62%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLV+ I R+LRK KE+ D K +K E V + VE+
Sbjct: 66 VIRAQEGSENLYASIDLVADKIARQLRKYKERIQD-----KQHGNVKTSEIVEDKPVEE- 119
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ +G+ E L E++R K F MPP+ + +A+EQL+LV HDFY F+N++T EIN
Sbjct: 120 -----NLIGDRAPE--LPSEVLRMKYFAMPPMAIEDALEQLQLVDHDFYMFRNKDTDEIN 172
Query: 260 IVYKRKEGGYGLIIP 216
++Y R GGYG+I P
Sbjct: 173 VIYIRNHGGYGVIQP 187
[46][TOP]
>UniRef100_B9NGT0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NGT0_POPTR
Length = 71
Score = 104 bits (260), Expect = 6e-21
Identities = 51/71 (71%), Positives = 58/71 (81%)
Frame = -3
Query: 356 MPPLTVAEAVEQLELVSHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDGKAEKVEPLP 177
MPPLTV+EA+EQLE V HDFYGF+NEETGEINIVYKRK GGYG IIPK + +AE++EPL
Sbjct: 1 MPPLTVSEAIEQLENVDHDFYGFRNEETGEINIVYKRKAGGYGPIIPKGNYEAERLEPLV 60
Query: 176 TEQLNEHSFAE 144
E E S AE
Sbjct: 61 VEPAREPSLAE 71
[47][TOP]
>UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO
Length = 199
Score = 104 bits (259), Expect = 7e-21
Identities = 59/136 (43%), Positives = 86/136 (63%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLVS I R+LRK KE+ + K ++ +K + V + VE
Sbjct: 66 VIRAQEGSENLYASIDLVSDKIARQLRKYKERRLEQ----KAYSPVKTGDVVQDQPVEG- 120
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ +G+ + E L E+VR K F MP +++ EA+EQL+LV HDFY F+N T EIN
Sbjct: 121 -----NLIGDRQPE--LPPEVVRMKYFAMPLMSIEEALEQLQLVDHDFYMFRNRNTNEIN 173
Query: 260 IVYKRKEGGYGLIIPK 213
++Y R GGYG+I P+
Sbjct: 174 VIYIRNHGGYGVIQPR 189
[48][TOP]
>UniRef100_Q7NMI0 Glr0786 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NMI0_GLOVI
Length = 187
Score = 103 bits (257), Expect = 1e-20
Identities = 55/136 (40%), Positives = 82/136 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE+ E +YA IDLV+ + R++RK KE+ + G + + P+ P
Sbjct: 66 IIRAEEETENLYASIDLVADKLHRQMRKYKERMQKKPKPKTGL-AVANQAPISLP----- 119
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+E+ L KE+VRTK F MPP++ EA++ L LV HDF+ F+N E+GEIN
Sbjct: 120 --------NGDEKATALPKEVVRTKYFAMPPMSPEEALDHLALVDHDFFVFRNAESGEIN 171
Query: 260 IVYKRKEGGYGLIIPK 213
++Y R GGYGLI+P+
Sbjct: 172 VLYARNHGGYGLIVPR 187
[49][TOP]
>UniRef100_A2BV60 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9515 RepID=A2BV60_PROM5
Length = 194
Score = 102 bits (254), Expect = 3e-20
Identities = 55/136 (40%), Positives = 81/136 (59%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE E +Y+ IDLVS + RKLRK KE RH K N + +
Sbjct: 65 IIRAEEKTENLYSSIDLVSNKLCRKLRKYKE------RHYKNLNYNLEKNKHSFTNTNEH 118
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
DS D ++ ++ E L + ++ K FEM P+++ EA +QL+L+ HDFY F+N++ E+
Sbjct: 119 LDSIDKNIFNDKREAKLPEPSIKNKYFEMIPISLEEARKQLDLIDHDFYVFRNKKNNELQ 178
Query: 260 IVYKRKEGGYGLIIPK 213
++YKRK GGYGLI K
Sbjct: 179 VIYKRKHGGYGLIQSK 194
[50][TOP]
>UniRef100_A9BE19 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9211 RepID=A9BE19_PROM4
Length = 197
Score = 100 bits (248), Expect = 1e-19
Identities = 58/138 (42%), Positives = 86/138 (62%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E ++ +YA IDLV+T + R+LRK KE+ SDH H G + P E VVED
Sbjct: 65 VIRAQERSQNLYASIDLVATKLCRQLRKYKERHSDH-HHSHGHSASLT--PTTEAVVED- 120
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ DSS+ + +E L +R K F MPP++ +A QL+L+ HDFY F+ ET ++
Sbjct: 121 -KAIDSSLIQGKEAH-LPTPGIRRKYFSMPPMSTEQARHQLDLIDHDFYMFKEIETQQLQ 178
Query: 260 IVYKRKEGGYGLIIPKKD 207
++Y+R GGYG+I K +
Sbjct: 179 VIYRRTHGGYGIIQAKDE 196
[51][TOP]
>UniRef100_C6TFU4 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TFU4_SOYBN
Length = 208
Score = 99.4 bits (246), Expect = 2e-19
Identities = 48/58 (82%), Positives = 52/58 (89%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREP 468
LFTK+HGVVRAEEDAE+ Y IDLVS+IIQRKLRKIKEK SDHGRHMKGFNRLK+ P
Sbjct: 132 LFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKLGSP 189
[52][TOP]
>UniRef100_Q7V2R9 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
subsp. pastoris str. CCMP1986 RepID=Q7V2R9_PROMP
Length = 194
Score = 99.0 bits (245), Expect = 3e-19
Identities = 55/136 (40%), Positives = 80/136 (58%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE E +Y+ IDLVS + RKLRK KE+ + K N L + +E+
Sbjct: 65 IIRAEEKTENLYSSIDLVSNKLCRKLRKYKER-----HNKKLHNNLVKNKNSYSNAIEE- 118
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
DS D + EE E L + ++ K FEM P+++ EA +QL+ + HDFY F+N+ E+
Sbjct: 119 SDSIDKDIFNEEREVRLPEPSIKKKYFEMIPISLEEARKQLDFIDHDFYLFRNKLNNELQ 178
Query: 260 IVYKRKEGGYGLIIPK 213
++YKR GGYGLI K
Sbjct: 179 VIYKRNHGGYGLIQSK 194
[53][TOP]
>UniRef100_B9I261 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I261_POPTR
Length = 118
Score = 99.0 bits (245), Expect = 3e-19
Identities = 55/112 (49%), Positives = 74/112 (66%)
Frame = -3
Query: 611 AEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDVEDS 432
AE+ + + C L + KLRKIK+K+SDHGRHMKGFN+LKVREP+ + VE+V D+
Sbjct: 12 AEKSKQVLIWCRQLFN-----KLRKIKDKESDHGRHMKGFNKLKVREPMSQE-VENVADT 65
Query: 431 TDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEE 276
+ ++DD + E V TK F+MPPLTV EA+ +L V H FYGF + E
Sbjct: 66 V-----SQRKDDDNLDEAVHTKYFDMPPLTVHEAIVRLGNVDHAFYGFGHAE 112
[54][TOP]
>UniRef100_A2CBL6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9303 RepID=A2CBL6_PROM3
Length = 195
Score = 98.6 bits (244), Expect = 4e-19
Identities = 55/133 (41%), Positives = 84/133 (63%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLV++ + R+LR+ KE+ SDH H G P E V++
Sbjct: 65 VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASST--PTTEAVID-- 119
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E D S+ + +E L VR K F MPP++V +A QL+L+ HDFY F+ +E+G++
Sbjct: 120 EAPIDGSLLDGKEAH-LPSPGVRRKYFAMPPMSVEQARHQLDLIDHDFYLFREQESGQLQ 178
Query: 260 IVYKRKEGGYGLI 222
++Y+R GGYG+I
Sbjct: 179 VIYRRNHGGYGVI 191
[55][TOP]
>UniRef100_A2BPM8 Light repressed protein A n=1 Tax=Prochlorococcus marinus str.
AS9601 RepID=A2BPM8_PROMS
Length = 194
Score = 98.6 bits (244), Expect = 4e-19
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSD--HGRHMKGFNRLKVREPVIEPVVE 447
V+RAEE E +Y+ IDLVS + RKLRK KE+++ H + K + L P+
Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL--------PIES 116
Query: 446 DVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
+ D ++ +E E L + ++ K FEM P++ EA +QL+L+ HDFY F+N++ E
Sbjct: 117 MESNFLDKALFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDFYVFRNKKNNE 176
Query: 266 INIVYKRKEGGYGLIIPK 213
+ ++YKR GGYGLI K
Sbjct: 177 LQVIYKRNHGGYGLIQSK 194
[56][TOP]
>UniRef100_A5GJ89 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GJ89_SYNPW
Length = 195
Score = 98.2 bits (243), Expect = 5e-19
Identities = 53/133 (39%), Positives = 86/133 (64%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLV++ + R+LR+ K++ SDH H G + P E V++D
Sbjct: 65 VIRAQERSENLYASIDLVASKLARQLRRFKDRHSDH-HHSHGHRASET--PTTESVLDD- 120
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E +S + +E + L VR K F MPP+T+ +A +QL+L+ HDFY F++ +G++
Sbjct: 121 EAIVESLLDGKEVQ--LPSPGVRRKYFSMPPMTLEQARQQLDLIDHDFYLFRDSASGDLQ 178
Query: 260 IVYKRKEGGYGLI 222
++Y+R GGYG+I
Sbjct: 179 VIYRRNHGGYGVI 191
[57][TOP]
>UniRef100_Q7V8W0 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
str. MIT 9313 RepID=Q7V8W0_PROMM
Length = 195
Score = 97.8 bits (242), Expect = 7e-19
Identities = 55/133 (41%), Positives = 84/133 (63%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLV++ + R+LR+ KE+ SDH H G P E V++
Sbjct: 65 VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASST--PTTEAVID-- 119
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E D S+ + +E L VR K F MPP++V +A QL+L+ HDFY F+ +E+G++
Sbjct: 120 EAPIDGSLLDGKEAH-LPSPGVRRKYFAMPPMSVEQARYQLDLIDHDFYLFREQESGQLQ 178
Query: 260 IVYKRKEGGYGLI 222
++Y+R GGYG+I
Sbjct: 179 VIYRRNHGGYGVI 191
[58][TOP]
>UniRef100_A3PBB8 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9301 RepID=A3PBB8_PROM0
Length = 194
Score = 97.8 bits (242), Expect = 7e-19
Identities = 54/138 (39%), Positives = 81/138 (58%), Gaps = 2/138 (1%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSD--HGRHMKGFNRLKVREPVIEPVVE 447
V+RAEE E +Y+ IDLVS + RKLRK KE+++ H + K + L P+
Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL--------PIES 116
Query: 446 DVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
+ D + +E E L + ++ K FEM P++ EA +QL+L+ HDFY F+N++ E
Sbjct: 117 MESNFLDKAFFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDFYVFRNKKNNE 176
Query: 266 INIVYKRKEGGYGLIIPK 213
+ ++YKR GGYGLI K
Sbjct: 177 LQVIYKRNHGGYGLIQSK 194
[59][TOP]
>UniRef100_Q1PKX8 Light repressed protein A-like protein n=1 Tax=uncultured
Prochlorococcus marinus clone ASNC2259
RepID=Q1PKX8_PROMA
Length = 194
Score = 97.8 bits (242), Expect = 7e-19
Identities = 55/138 (39%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSD--HGRHMKGFNRLKVREPVIEPVVE 447
V+RAEE E +Y+ IDLVS + RKLRK KE+++ H + K + L P+
Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL--------PIES 116
Query: 446 DVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
+ D + E E L K ++ K FEM P++ EA +QL+L+ HDFY F+N++ E
Sbjct: 117 MESNFLDKAFFIEGTEASLPKPSIKNKYFEMTPISSDEARKQLDLIDHDFYVFRNKKNNE 176
Query: 266 INIVYKRKEGGYGLIIPK 213
+ ++YKR GGYGLI K
Sbjct: 177 LQVIYKRNHGGYGLIQSK 194
[60][TOP]
>UniRef100_A4CWK2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CWK2_SYNPV
Length = 195
Score = 97.8 bits (242), Expect = 7e-19
Identities = 54/133 (40%), Positives = 83/133 (62%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLV++ + R+LR+ K++ SDH H G K E V D
Sbjct: 65 VIRAQERSENLYASIDLVASKLARQLRRYKDRHSDH-HHSHGH---KASETPTTEAVLDN 120
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E +S + +E + L VR K F MPP+T+ +A +QL+L+ HDFY F++ ++GE+
Sbjct: 121 EAVVESLLDGKEVQ--LPSPGVRRKYFAMPPMTLEQARQQLDLIDHDFYVFRDSDSGELQ 178
Query: 260 IVYKRKEGGYGLI 222
++Y R GGYG+I
Sbjct: 179 VIYHRNHGGYGVI 191
[61][TOP]
>UniRef100_Q7VDH9 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus
RepID=Q7VDH9_PROMA
Length = 195
Score = 97.1 bits (240), Expect = 1e-18
Identities = 55/137 (40%), Positives = 82/137 (59%), Gaps = 1/137 (0%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E ++ +YA IDLVS + R+LR+ KE+ SDH H G I P E+V
Sbjct: 65 VIRAQERSQNLYASIDLVSNKLCRQLRRYKERHSDH-HHSPG------HRASITPTTEEV 117
Query: 440 -EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEI 264
ED + + E +E L K +R K F M P+ + +A QL+L+ HDFY F+ E+ ++
Sbjct: 118 LEDKSINGSLVEGKEAKLPKPGIRRKYFPMHPMNIEQAQHQLDLIDHDFYLFKEAESEQL 177
Query: 263 NIVYKRKEGGYGLIIPK 213
++Y+RK GGYG+I K
Sbjct: 178 QVIYRRKNGGYGVIQAK 194
[62][TOP]
>UniRef100_A9KS11 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium phytofermentans ISDg RepID=A9KS11_CLOPH
Length = 178
Score = 97.1 bits (240), Expect = 1e-18
Identities = 56/139 (40%), Positives = 78/139 (56%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K +VRAE+ + +YA IDLV +I+R+L+K K K D + FN
Sbjct: 57 KGNIVRAEQVSNDMYASIDLVEEVIERQLKKYKSKLKDMNQSAANFN---------PSFF 107
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
EDV + E+ +E+D+ I R K F M P+ EA Q+EL+ H+FY F+N ET
Sbjct: 108 EDV-------LNEDSDEEDI--NITRVKRFAMKPMDAEEACVQMELLGHNFYVFRNAETD 158
Query: 269 EINIVYKRKEGGYGLIIPK 213
E+N+VYKRK YGLI P+
Sbjct: 159 EVNVVYKRKGNSYGLIEPE 177
[63][TOP]
>UniRef100_A5GUZ2 Light repressed protein A homolog n=1 Tax=Synechococcus sp. RCC307
RepID=A5GUZ2_SYNR3
Length = 187
Score = 96.7 bits (239), Expect = 2e-18
Identities = 50/133 (37%), Positives = 79/133 (59%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E ++ +YA IDLV+ + R+L++ K++ HG H EP + P+ D+
Sbjct: 65 VIRAQERSQNLYASIDLVAGKLARQLQRHKDRRQGHGHHSD-----LQAEPEVMPLQGDM 119
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ +L +VR K F MPP++V EA+ QLE++ HDFY F+N + GE+
Sbjct: 120 LQGRHA---------ELPAPVVRRKYFAMPPMSVEEAIHQLEVIDHDFYVFRNADNGELQ 170
Query: 260 IVYKRKEGGYGLI 222
+VY+R GGYG+I
Sbjct: 171 VVYQRNHGGYGVI 183
[64][TOP]
>UniRef100_B9P0E9 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. MIT
9202 RepID=B9P0E9_PROMA
Length = 194
Score = 96.7 bits (239), Expect = 2e-18
Identities = 52/136 (38%), Positives = 81/136 (59%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE E +Y+ IDLVS + RKLRK KE+++ K F+ + + P+ +
Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNN------KIFHNNQFKNKESFPIADTE 118
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
D ++ ++ E L + ++ K FEM P++ EA +QL+L+ HDFY F+N + E+
Sbjct: 119 SRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNSKNNELQ 178
Query: 260 IVYKRKEGGYGLIIPK 213
++YKR GGYGLI K
Sbjct: 179 VIYKRNHGGYGLIQSK 194
[65][TOP]
>UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO
Length = 284
Score = 96.7 bits (239), Expect = 2e-18
Identities = 54/140 (38%), Positives = 89/140 (63%), Gaps = 2/140 (1%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKD-SDHGRHMKGFNRLKVREPVIEPV 453
++G++R+EE+A+ +YA ID VS ++RKLRK+KEK S +H K + + + +
Sbjct: 147 RNGIIRSEEEADDLYASIDAVSDKLERKLRKVKEKKISKRPKHNKNAPKAQT-----DAI 201
Query: 452 VEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEET 273
VE+++ + D ++ +E + D E+VR K + TV EA E++E + H F+ F+N
Sbjct: 202 VEEMQ-AADEALADESMDYD---EVVREKFHPVRKCTVYEAAEEMENLGHTFFAFRNVAQ 257
Query: 272 G-EINIVYKRKEGGYGLIIP 216
G E+N+VYKR GGYG+I+P
Sbjct: 258 GNEVNVVYKRDAGGYGVIVP 277
[66][TOP]
>UniRef100_A9W9Y4 Ribosomal subunit interface protein n=2 Tax=Chloroflexus
RepID=A9W9Y4_CHLAA
Length = 197
Score = 96.3 bits (238), Expect = 2e-18
Identities = 53/141 (37%), Positives = 86/141 (60%), Gaps = 2/141 (1%)
Frame = -3
Query: 629 KHGVV-RAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGF-NRLKVREPVIEP 456
+HGV+ RAEE A +YA ID V ++QR++ + K+K R + N L E V
Sbjct: 62 EHGVILRAEERAPDLYAAIDEVQEVLQRQIARYKDKYWRRSREQRRAPNGLTPAEEVAIA 121
Query: 455 VVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEE 276
E +T + VG E ++RTKTF + P+ V +A+EQ+EL+ H+F+ FQ+ E
Sbjct: 122 EAEAAALATPTEVGSEAR-------VIRTKTFRLRPMFVDDAIEQMELLGHNFFVFQDAE 174
Query: 275 TGEINIVYKRKEGGYGLIIPK 213
T +++++Y+R++G YG+IIP+
Sbjct: 175 TMQVSVLYRRRDGNYGVIIPE 195
[67][TOP]
>UniRef100_B0NJJ3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
35704 RepID=B0NJJ3_EUBSP
Length = 179
Score = 96.3 bits (238), Expect = 2e-18
Identities = 57/139 (41%), Positives = 81/139 (58%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K G++R+E+++ +Y IDLV +I+R+LRK K K RH +G K
Sbjct: 57 KGGIIRSEQESSDMYVSIDLVEEVIERQLRKYKNKLI--ARHQEGSGNFK---------- 104
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
++ DS GE E+D IK IVRTK F P+ +A Q+EL+ HDF+ F N ET
Sbjct: 105 ---QEFFDS--GERSEDDGEIK-IVRTKKFGFKPMYPEDACVQMELLGHDFFVFCNAETD 158
Query: 269 EINIVYKRKEGGYGLIIPK 213
E+N+VY+RK G +GLI P+
Sbjct: 159 EVNVVYRRKNGTFGLIEPE 177
[68][TOP]
>UniRef100_Q7U8F3 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 8102
RepID=Q7U8F3_SYNPX
Length = 195
Score = 95.9 bits (237), Expect = 3e-18
Identities = 52/133 (39%), Positives = 81/133 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDL ++ + R+LR+ KE+ SDH H G + P E V +D
Sbjct: 65 VIRAQERSENLYASIDLAASKLARQLRRWKERHSDH-HHSHGHSASTT--PATEAVTDDS 121
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ G E E D VR K F MPP+++ EA QL+L+ HDFY F+++++ ++
Sbjct: 122 QVDGSLLQGREAELPD---PGVRRKYFAMPPMSLEEARRQLDLIDHDFYLFRDKDSDQLQ 178
Query: 260 IVYKRKEGGYGLI 222
++Y+R GGYG+I
Sbjct: 179 VIYRRNHGGYGVI 191
[69][TOP]
>UniRef100_B8GDB0 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Chloroflexus aggregans DSM 9485 RepID=B8GDB0_CHLAD
Length = 197
Score = 95.9 bits (237), Expect = 3e-18
Identities = 49/140 (35%), Positives = 87/140 (62%), Gaps = 1/140 (0%)
Frame = -3
Query: 629 KHGVV-RAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPV 453
+HGV+ RAEE A +YA ID V ++QR++++ K+K R ++ P E
Sbjct: 62 EHGVILRAEERAADLYAAIDAVQEVLQRQIQRYKDKYWRRSRELR--RATNGLTPAEEVA 119
Query: 452 VEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEET 273
+ + E ++ E E + +++RTKTF + P+ V +A+EQ+EL+ H F+ FQ+ ET
Sbjct: 120 IAEAETEAMTAPVETEP----VAKVIRTKTFRLRPMFVDDAIEQMELLGHTFFVFQDAET 175
Query: 272 GEINIVYKRKEGGYGLIIPK 213
+I+++Y+R++G YG+I+P+
Sbjct: 176 MQISVLYRRRDGNYGVIVPE 195
[70][TOP]
>UniRef100_B6G8G1 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM
13279 RepID=B6G8G1_9ACTN
Length = 194
Score = 95.9 bits (237), Expect = 3e-18
Identities = 55/142 (38%), Positives = 81/142 (57%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+R E +YA IDL + + R+LRK K + D+ +G + +V VE V
Sbjct: 66 VIRVAEHGADMYAAIDLAADKVTRQLRKFKTRVVDN--RQQGLSAAEVAP------VEPV 117
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
D D + EEE++ ++VR K E+ P+T +A+ Q +L+ HDFY F+N TG IN
Sbjct: 118 ADLADLLIPEEEDD-----QLVRVKEIELTPMTEEQALVQTDLLGHDFYVFENSTTGLIN 172
Query: 260 IVYKRKEGGYGLIIPKKDGKAE 195
+VY RK GGYG+I PK + + E
Sbjct: 173 VVYHRKNGGYGIIKPKLEVEGE 194
[71][TOP]
>UniRef100_Q0ICJ8 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
CC9311 RepID=Q0ICJ8_SYNS3
Length = 191
Score = 95.5 bits (236), Expect = 3e-18
Identities = 54/133 (40%), Positives = 80/133 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLV++ + R+LR+ KE+ SDHG P V
Sbjct: 65 VIRAQERSENLYASIDLVASKLARQLRRFKERHSDHGHRTT---------PTAANDVLLT 115
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E T+ S+ E +E L VR K F MP +++ EA QLEL+ HDFY F+++E+GE+
Sbjct: 116 ERPTEDSLLEGKEAQ-LPSPGVRRKYFAMPAMSLEEARHQLELIDHDFYLFRDKESGELQ 174
Query: 260 IVYKRKEGGYGLI 222
++Y R GG+G+I
Sbjct: 175 VIYHRNHGGFGVI 187
[72][TOP]
>UniRef100_Q3AZ51 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Synechococcus sp. CC9902 RepID=Q3AZ51_SYNS9
Length = 195
Score = 95.1 bits (235), Expect = 4e-18
Identities = 53/135 (39%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLV + R+LRK KE+ +DH H G + + P E+V
Sbjct: 65 VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHGHSAS------LTPSTEEV 117
Query: 440 EDST--DSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
D + + S+ + +E L + VR K F MPP+T+ +A QL+++ HDFY F++ +TG+
Sbjct: 118 SDESAVEGSLVDGKEAQ-LPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFYLFRDSKTGD 176
Query: 266 INIVYKRKEGGYGLI 222
+ ++Y+R GGYG+I
Sbjct: 177 LQVIYRRNHGGYGVI 191
[73][TOP]
>UniRef100_Q31CD8 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Prochlorococcus marinus str. MIT 9312
RepID=Q31CD8_PROM9
Length = 194
Score = 95.1 bits (235), Expect = 4e-18
Identities = 53/136 (38%), Positives = 80/136 (58%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE E +Y+ IDLVS + RKLRK KE++ N+ K E P+
Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNYKTNY----INQFKNNESF--PIESAD 118
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ D ++ ++ E L + ++ K FEM P++ EA +QL+L+ HDFY F+N++ E+
Sbjct: 119 SNVLDKTLFKQGREASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNKKNNELQ 178
Query: 260 IVYKRKEGGYGLIIPK 213
++YKR GGYGLI K
Sbjct: 179 VIYKRNHGGYGLIQSK 194
[74][TOP]
>UniRef100_Q1AVJ5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ5_RUBXD
Length = 189
Score = 95.1 bits (235), Expect = 4e-18
Identities = 55/139 (39%), Positives = 86/139 (61%), Gaps = 2/139 (1%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSD--HGRHMKGFNRLKVREPVIEPVVE 447
V++A E +E +YA ID +S ++R++++ + + D HGR +K + EP +P V
Sbjct: 68 VLKAREASEDMYASIDRMSDKLERQVKRYRGRQVDRWHGR-LKNHEGARA-EP--QPFVA 123
Query: 446 DVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
EEE+D+ IVRTK F+M P++ EAV Q+EL+ HDF+ F N +TG+
Sbjct: 124 -------------EEEEDIEPRIVRTKQFQMKPMSAEEAVLQMELLDHDFFVFTNADTGD 170
Query: 266 INIVYKRKEGGYGLIIPKK 210
IN+VY+R++G YGLI P +
Sbjct: 171 INVVYRRRDGNYGLIEPAR 189
[75][TOP]
>UniRef100_Q05SE1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916
RepID=Q05SE1_9SYNE
Length = 195
Score = 95.1 bits (235), Expect = 4e-18
Identities = 54/133 (40%), Positives = 82/133 (61%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLV+ + R+LR+ KE+ SDH H G P E V++D
Sbjct: 65 VIRAQERSENLYASIDLVANKLSRQLRRYKERHSDH-HHSHGHRASTT--PTTEAVLDD- 120
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ D S+ + +E L VR K F MPP++V EA QL+L+ HDF+ F++ + E+
Sbjct: 121 -SAVDGSLLDGKEAH-LPDPGVRRKYFPMPPMSVEEARHQLDLIDHDFFLFRDASSKELQ 178
Query: 260 IVYKRKEGGYGLI 222
++Y+R GGYG+I
Sbjct: 179 VIYRRNHGGYGVI 191
[76][TOP]
>UniRef100_A7NNI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Roseiflexus castenholzii DSM 13941
RepID=A7NNI5_ROSCS
Length = 198
Score = 94.7 bits (234), Expect = 6e-18
Identities = 53/139 (38%), Positives = 85/139 (61%), Gaps = 1/139 (0%)
Frame = -3
Query: 626 HGV-VRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
HGV VRAE A +YA ID V +QR++ + K+K GR L+ + I +
Sbjct: 68 HGVLVRAERRAPELYAAIDEVYDTLQRQIERYKDKHWRRGR-------LRRQGGQIVEAL 120
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
++ + + + EEE+ IVRTK F++ P+ EAVEQ+EL+ H F+ FQ+ +TG
Sbjct: 121 PEMNAAAPAPIDEEEQRP----RIVRTKEFQVKPMYSDEAVEQMELLGHSFFIFQDADTG 176
Query: 269 EINIVYKRKEGGYGLIIPK 213
++N++Y+R++G YGLI+P+
Sbjct: 177 KLNVLYRRQDGNYGLIVPE 195
[77][TOP]
>UniRef100_A5UVY5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Roseiflexus sp. RS-1 RepID=A5UVY5_ROSS1
Length = 193
Score = 94.7 bits (234), Expect = 6e-18
Identities = 52/139 (37%), Positives = 88/139 (63%), Gaps = 1/139 (0%)
Frame = -3
Query: 626 HGV-VRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
HGV VRAE A +YA ID V +QR++ + K+K G+ + + +V
Sbjct: 63 HGVLVRAERRAPELYAAIDEVYDTLQRQIERYKDKHWRRGKLRRQGGQ----------IV 112
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
E + + S+ + +EE++ + IVRTK F++ P+ EAVEQ+EL+ H+F+ FQ+ +TG
Sbjct: 113 EALPELAAPSLADTQEEEERPR-IVRTKEFQVKPMYSDEAVEQMELLGHNFFIFQDADTG 171
Query: 269 EINIVYKRKEGGYGLIIPK 213
++N++Y+R++G YGLI+P+
Sbjct: 172 KLNVLYRRQDGNYGLIVPE 190
[78][TOP]
>UniRef100_A8G3B2 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus str.
MIT 9215 RepID=A8G3B2_PROM2
Length = 194
Score = 94.4 bits (233), Expect = 7e-18
Identities = 54/137 (39%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE E +Y+ IDLVS + RKLRK KE+++ + N+ K +E + + D
Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHN----NQFKNKESFL---IADT 117
Query: 440 EDS-TDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEI 264
E D ++ ++ E L + ++ K FEM P++ EA +QL+L+ HDFY F+N + E+
Sbjct: 118 ESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNNKNNEL 177
Query: 263 NIVYKRKEGGYGLIIPK 213
++YKR GGYGLI K
Sbjct: 178 QVIYKRNHGGYGLIQSK 194
[79][TOP]
>UniRef100_A2C0K6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. NATL1A RepID=A2C0K6_PROM1
Length = 194
Score = 94.4 bits (233), Expect = 7e-18
Identities = 53/136 (38%), Positives = 78/136 (57%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLV+ + R+LRK KE+ + H H + E + E+
Sbjct: 65 VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHNNQSTKSVQNEKI-----ENF 119
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
S S + E +E L VR K FEM P+T+ +A QL+L+ HDFY F+ EE +
Sbjct: 120 SSSDHSLI--EGKEPHLPNPGVRRKYFEMDPMTIEQARVQLDLIDHDFYLFREEEGSALR 177
Query: 260 IVYKRKEGGYGLIIPK 213
++Y+R GGYG+I K
Sbjct: 178 VIYRRNHGGYGVIQEK 193
[80][TOP]
>UniRef100_C4FCG3 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis
DSM 13280 RepID=C4FCG3_9ACTN
Length = 194
Score = 94.0 bits (232), Expect = 1e-17
Identities = 54/142 (38%), Positives = 81/142 (57%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+R E +YA IDL + + R+LRK K + D+ +G + +V VE V
Sbjct: 66 VIRVAEHGADMYAAIDLAAEKVTRQLRKFKTRVVDN--RQQGLSAAEVAP------VEPV 117
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
D D + E+E++ ++VR K E+ P+T EA+ Q +L+ HDFY F+N TG +N
Sbjct: 118 ADLADLLLPEDEDD-----QLVRVKEVELTPMTDEEALVQTDLIGHDFYVFENSVTGLVN 172
Query: 260 IVYKRKEGGYGLIIPKKDGKAE 195
+VY RK GGYG+I PK + + E
Sbjct: 173 VVYHRKNGGYGIIKPKIEVEGE 194
[81][TOP]
>UniRef100_Q063T8 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Synechococcus sp. BL107 RepID=Q063T8_9SYNE
Length = 195
Score = 93.6 bits (231), Expect = 1e-17
Identities = 55/137 (40%), Positives = 83/137 (60%), Gaps = 4/137 (2%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLV + R+LRK KE+ +DH H G + + P E+V
Sbjct: 65 VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHGHSAS------LTPSTEEV 117
Query: 440 EDSTDSSVGE----EEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEET 273
+D SV E + +E L + VR K F MPP+T+ +A QL+++ HDFY F++ T
Sbjct: 118 ---SDESVVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFYLFKDSAT 174
Query: 272 GEINIVYKRKEGGYGLI 222
G + ++Y+R GGYG+I
Sbjct: 175 GALQVIYRRNHGGYGVI 191
[82][TOP]
>UniRef100_C4G2X0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC
49176 RepID=C4G2X0_ABIDE
Length = 175
Score = 93.6 bits (231), Expect = 1e-17
Identities = 51/139 (36%), Positives = 80/139 (57%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++RAE+ ++ +Y IDL+ II+R+LR+ K K D + F
Sbjct: 57 KGHIIRAEQVSDDMYVSIDLIEDIIERQLRRYKTKIVDSKQSASNF-------------- 102
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
T + + +++ ED+ +K ++RTK F + P+ EA Q+EL++H FY F+N ET
Sbjct: 103 ------TSAFMQDDDYEDEDVK-VIRTKRFAVKPMDPEEACVQMELLNHSFYVFRNAETD 155
Query: 269 EINIVYKRKEGGYGLIIPK 213
E+N+VYKRK G YGLI P+
Sbjct: 156 EVNVVYKRKNGDYGLIEPE 174
[83][TOP]
>UniRef100_A3ZA02 Light repressed protein A-like protein n=1 Tax=Synechococcus sp.
RS9917 RepID=A3ZA02_9SYNE
Length = 195
Score = 93.2 bits (230), Expect = 2e-17
Identities = 52/135 (38%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLV++ + R+LR+ KE+ SDH H G + P + +
Sbjct: 65 VIRAQERSENLYASIDLVASKLCRQLRRFKERHSDH-HHSNGHRASET------PPTDAI 117
Query: 440 EDST--DSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
D+ D S+ + +E L VR K F MPP+++ EA QL+++ HDFY F++ TG+
Sbjct: 118 ADAAPIDGSLLDGKEVQ-LPDPGVRRKYFAMPPMSLEEARHQLDVIDHDFYLFRDASTGD 176
Query: 266 INIVYKRKEGGYGLI 222
+ ++Y+R GGYG+I
Sbjct: 177 LQVIYRRNHGGYGVI 191
[84][TOP]
>UniRef100_C6J2M0 Ribosomal subunit interface protein n=1 Tax=Paenibacillus sp. oral
taxon 786 str. D14 RepID=C6J2M0_9BACL
Length = 183
Score = 92.8 bits (229), Expect = 2e-17
Identities = 55/133 (41%), Positives = 85/133 (63%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAE+ ++ +YA ID V ++R++RK K K NR K+R+ ++ + V
Sbjct: 62 VLRAEDRSDDMYASIDAVVDKLERQIRKHKTK----------INR-KLRQKGVKNSLF-V 109
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
ED+T SV +E E++L E+VRTK F + P+ V EA+ Q+ +V H+F+ F N +T E+N
Sbjct: 110 EDATTGSVALDEGEEEL--EVVRTKRFTLKPMDVEEAILQMNMVGHNFFVFSNIDTKEVN 167
Query: 260 IVYKRKEGGYGLI 222
+VYKR +G YGLI
Sbjct: 168 VVYKRNDGKYGLI 180
[85][TOP]
>UniRef100_C0BAM2 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
27758 RepID=C0BAM2_9FIRM
Length = 189
Score = 92.4 bits (228), Expect = 3e-17
Identities = 57/141 (40%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEK--DSDHGRHMKGFNRLKVREPVIEP 456
K ++R+E+++ +Y IDLV II+R+LRK K K G H R+ IE
Sbjct: 68 KGNIIRSEQESSDMYVSIDLVEEIIERQLRKYKTKLIAKQQGGH-------DFRQEFIE- 119
Query: 455 VVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEE 276
+D+S E +E EIVRTK F + P+ +A Q+EL+ H+FY F N E
Sbjct: 120 --------SDTSAAESDEI-----EIVRTKRFGIKPMFPEDACIQMELLGHNFYVFSNAE 166
Query: 275 TGEINIVYKRKEGGYGLIIPK 213
T E+N+VYKRK G YGLI P+
Sbjct: 167 TDEVNVVYKRKNGTYGLIEPE 187
[86][TOP]
>UniRef100_Q2B1U0 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. NRRL
B-14911 RepID=Q2B1U0_9BACI
Length = 184
Score = 92.0 bits (227), Expect = 4e-17
Identities = 56/133 (42%), Positives = 78/133 (58%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEED E +YA IDL+ ++R++RK K K NR K RE ++
Sbjct: 63 VLRAEEDHEDMYAAIDLIVDKLERQIRKHKTK----------VNR-KFREKGSPTLMFAS 111
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
D ++ V EEE+ D E+VR K+F++ P+ EA+ Q+ L+ H FY F N ET N
Sbjct: 112 FDEPEAPVLEEEDND---LEVVRQKSFDLKPMDNEEAILQMNLLGHSFYVFTNAETNRTN 168
Query: 260 IVYKRKEGGYGLI 222
+VYKRK+G YGLI
Sbjct: 169 VVYKRKDGRYGLI 181
[87][TOP]
>UniRef100_C0Z6T8 Putative uncharacterized protein yvyD n=1 Tax=Brevibacillus brevis
NBRC 100599 RepID=C0Z6T8_BREBN
Length = 185
Score = 91.7 bits (226), Expect = 5e-17
Identities = 52/136 (38%), Positives = 82/136 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE E +YA IDLV ++R++RK K K R + R+ RE +PV +
Sbjct: 62 IIRAEETHEDMYAAIDLVVEKLERQIRKHKTKLMRKLR-VDSTGRIAQRES--QPVAVMI 118
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
D +E+D+ +IVRTK F++ P+ EAV Q++++ H F+ FQN +T +++
Sbjct: 119 PDV---------DEEDIDIDIVRTKRFDLKPMDAQEAVMQMDMLGHSFFVFQNSDTNDVS 169
Query: 260 IVYKRKEGGYGLIIPK 213
+VY+R +G YGLI PK
Sbjct: 170 VVYRRNDGRYGLIEPK 185
[88][TOP]
>UniRef100_Q1PJW9 Light repressed protein A n=1 Tax=uncultured Prochlorococcus
marinus clone HF10-88F10 RepID=Q1PJW9_PROMA
Length = 194
Score = 91.7 bits (226), Expect = 5e-17
Identities = 52/136 (38%), Positives = 81/136 (59%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE E +Y+ IDLVS + RKLRK KE+++ + N+ K +E P
Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHN----NQFKNKESF--PSENTE 118
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
D ++ ++ E L + ++ K FEM P++ EA +QL+L+ HDFY F+N++ ++
Sbjct: 119 SRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNKKNNQLQ 178
Query: 260 IVYKRKEGGYGLIIPK 213
++YKR GGYGLI K
Sbjct: 179 VIYKRNHGGYGLIQSK 194
[89][TOP]
>UniRef100_Q46H11 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Prochlorococcus marinus str. NATL2A
RepID=Q46H11_PROMT
Length = 194
Score = 91.3 bits (225), Expect = 6e-17
Identities = 54/138 (39%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDLV+ + R+LRK KE+ + H H + E D
Sbjct: 65 VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHHNQSTKSVQNE--------DT 116
Query: 440 ED--STDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
++ S+D S+ E +E L VR K FEM P+ + +A QL+L+ HDFY F+ EE
Sbjct: 117 QNFSSSDHSL-TEGKEPHLPSPGVRRKYFEMTPMNIEQARVQLDLIDHDFYLFREEEGSA 175
Query: 266 INIVYKRKEGGYGLIIPK 213
+ ++YKR GGYG+I K
Sbjct: 176 LRVIYKRNHGGYGVIQEK 193
[90][TOP]
>UniRef100_C0FKQ0 Putative uncharacterized protein n=1 Tax=Clostridium sp. M62/1
RepID=C0FKQ0_9CLOT
Length = 175
Score = 91.3 bits (225), Expect = 6e-17
Identities = 59/139 (42%), Positives = 76/139 (54%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++RAEE + +Y IDLV II+R+L+K K K D K + PV
Sbjct: 57 KGHIIRAEEQSTDMYVSIDLVEEIIERQLKKYKRKLID-----------KKQAPV----- 100
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
D ++ V EE E DD IK I + K F M P+ EA Q+EL+ H FY F N ET
Sbjct: 101 ----DFSELFVQEESEPDDEIK-IEKVKKFAMKPMDPEEACVQMELLGHSFYVFLNAETE 155
Query: 269 EINIVYKRKEGGYGLIIPK 213
E+N+VYKRK YGLI P+
Sbjct: 156 EVNVVYKRKGHTYGLIEPE 174
[91][TOP]
>UniRef100_B6FVY1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
13275 RepID=B6FVY1_9CLOT
Length = 194
Score = 91.3 bits (225), Expect = 6e-17
Identities = 54/139 (38%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
Frame = -3
Query: 632 KKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKG--FNRLKVREPVIE 459
K V+RAEE E +Y IDLV ++ +L+K K+K + K F+ ++ + ++E
Sbjct: 65 KNGHVIRAEESQENLYPAIDLVVDKLKIQLKKYKDKMQKRHQENKSIRFDSPEINDSILE 124
Query: 458 PVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNE 279
+ED ED + I R K + P++ EAV Q+ELV HDFY F+N+
Sbjct: 125 EDLEDFEDE--------------LFIIKRRKRINIKPMSEEEAVLQMELVGHDFYIFRND 170
Query: 278 ETGEINIVYKRKEGGYGLI 222
ET EI +VYKRK GGYG+I
Sbjct: 171 ETDEIALVYKRKNGGYGII 189
[92][TOP]
>UniRef100_B9I248 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I248_POPTR
Length = 115
Score = 91.3 bits (225), Expect = 6e-17
Identities = 51/104 (49%), Positives = 65/104 (62%), Gaps = 12/104 (11%)
Frame = -3
Query: 551 RKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDVEDSTDSSVGEEEEEDDLI----- 387
RKLRKIK+K+SDHGRHMKGFN+LKVREP+ + V D + T S +++ D+L
Sbjct: 8 RKLRKIKDKESDHGRHMKGFNKLKVREPMSQVVENDAD--TVSQRKDDDNLDELFYMHLV 65
Query: 386 -------KEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEE 276
V TK F+MPPLTV EA+ +L V H FYGF + E
Sbjct: 66 TIHSIISSNAVHTKYFDMPPLTVDEAIVRLGNVDHAFYGFGHAE 109
[93][TOP]
>UniRef100_Q0SR10 Ribosomal subunit interface protein n=1 Tax=Clostridium perfringens
SM101 RepID=Q0SR10_CLOPS
Length = 179
Score = 90.9 bits (224), Expect = 8e-17
Identities = 52/138 (37%), Positives = 82/138 (59%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++R EE + +Y IDLV I+R++RK K + S R+ +R I+P+ ED+
Sbjct: 60 LLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRYDS------LRFAHIDPI-EDM 112
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
++ ++ +IV+TK F++ P+ EAV Q+EL+ HDF+ FQ+ ET ++N
Sbjct: 113 KEEKEA-------------KIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLN 159
Query: 260 IVYKRKEGGYGLIIPKKD 207
+VYKRK+G YGLI P D
Sbjct: 160 VVYKRKDGNYGLIEPGLD 177
[94][TOP]
>UniRef100_C2EGB2 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
salivarius ATCC 11741 RepID=C2EGB2_9LACO
Length = 184
Score = 90.9 bits (224), Expect = 8e-17
Identities = 54/138 (39%), Positives = 81/138 (58%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE + +YA IDLV+ ++R++RK K K + R KGF + PV +
Sbjct: 64 VLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKNFE-----FAPVAD-- 115
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E+EE +D EIVRTK + P+ EAV Q++++ HDF+ +++ E G IN
Sbjct: 116 ---------EKEEVEDKKFEIVRTKRLSLKPMDSEEAVLQMDMLGHDFFIYEDAENGGIN 166
Query: 260 IVYKRKEGGYGLIIPKKD 207
IVY+R++G YGLI +D
Sbjct: 167 IVYRRRDGRYGLIEASED 184
[95][TOP]
>UniRef100_B5IMZ9 Light repressed protein n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IMZ9_9CHRO
Length = 195
Score = 90.9 bits (224), Expect = 8e-17
Identities = 53/140 (37%), Positives = 80/140 (57%), Gaps = 4/140 (2%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPV----IEPV 453
V+RA+E ++ +YA IDLV++ + R+L + KE+ H RH +R E + P
Sbjct: 65 VIRAQEHSDNLYASIDLVASKLTRQLNRYKERV--HERHQGPVHRSARDEEAGAASLPPP 122
Query: 452 VEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEET 273
+ D +E +L VR K F MPP+++ EA+ QLEL+ HDFY F+ E+
Sbjct: 123 GSSLTDG---------KEPELPSRGVRRKYFAMPPMSLDEALHQLELIDHDFYVFREAES 173
Query: 272 GEINIVYKRKEGGYGLIIPK 213
G+I +VY R GG+G+I PK
Sbjct: 174 GQIQVVYHRNHGGFGVIQPK 193
[96][TOP]
>UniRef100_B0A7Y1 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM
16795 RepID=B0A7Y1_9CLOT
Length = 187
Score = 90.9 bits (224), Expect = 8e-17
Identities = 53/133 (39%), Positives = 83/133 (62%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAE+ E +YA ID+V + ++LR+ K K +KG + K +E + +ED
Sbjct: 67 IIRAEDSEENLYAAIDVVYDKLNKQLRRYKNK-------LKGKYQSKGQESIRFQNIED- 118
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
++ +++ E D++ E R K F+M P++ EAV Q+ELV HDFY F+N +T EI+
Sbjct: 119 -----NAAEDKDGEFDIVIE--RHKKFDMKPMSPEEAVLQMELVGHDFYMFRNIDTDEIS 171
Query: 260 IVYKRKEGGYGLI 222
IVY+R+ GGYGLI
Sbjct: 172 IVYRRETGGYGLI 184
[97][TOP]
>UniRef100_A3YVD7 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. WH
5701 RepID=A3YVD7_9SYNE
Length = 195
Score = 90.9 bits (224), Expect = 8e-17
Identities = 52/137 (37%), Positives = 85/137 (62%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA ID+V+ + R+LR+ K++ S+H H G + V + +P +E V
Sbjct: 65 VIRAQERSENLYASIDMVAGKLSRQLRRYKDRLSNH--HGAG-SPANVGDDTEQPSLEGV 121
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ +G+ E L VR K F MP +++ +A+ QLEL+ HDFY F+ E +G +
Sbjct: 122 --LPNDLIGDREPA--LPVPAVRRKYFSMPAMSLDQALHQLELIDHDFYVFREESSGGLQ 177
Query: 260 IVYKRKEGGYGLIIPKK 210
+VY+R GG+G+I PK+
Sbjct: 178 VVYRRNHGGFGVIQPKE 194
[98][TOP]
>UniRef100_Q7XYJ6 Ribosomal protein rpS22 (Fragment) n=1 Tax=Bigelowiella natans
RepID=Q7XYJ6_BIGNA
Length = 170
Score = 90.9 bits (224), Expect = 8e-17
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 16/160 (10%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
++ K V+R + + Y+ IDLV+ ++ RKLRK KE+ + R G
Sbjct: 20 VYVKDSKVIRGSVSSVSEYSSIDLVTDLVNRKLRKYKER-KEGKRTASGVRTF------- 71
Query: 461 EPVVEDVEDSTDSSVGEEEEEDDLIKE----------------IVRTKTFEMPPLTVAEA 330
D+ DS+D + +DD+ +E +VR K F MPP+++ +A
Sbjct: 72 --YTNDISDSSDVEGAAVQGQDDVQQEEYSGIPEGYAPVEDVSVVRRKKFPMPPISIEDA 129
Query: 329 VEQLELVSHDFYGFQNEETGEINIVYKRKEGGYGLIIPKK 210
L+ + HDFY F+N ET EIN+VY+R EGG GLI P++
Sbjct: 130 TLCLDYLDHDFYVFRNSETKEINVVYRRAEGGVGLIEPEQ 169
[99][TOP]
>UniRef100_C1N7A9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N7A9_9CHLO
Length = 245
Score = 90.9 bits (224), Expect = 8e-17
Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
++GVVR+EE+A+ +YA ID VS I+RKLRKIKEK N K + P
Sbjct: 110 RNGVVRSEEEADNLYASIDAVSDKIERKLRKIKEKK----------NSKKAGKTKANPKA 159
Query: 449 EDVEDSTDSSVGEEEEEDDL-IKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEET 273
+ + ++ +E D++ +E V K + T EA E++E + H FY F+N+
Sbjct: 160 QTADIVAAAAEADEARADEIEFEETVGVKYMAVKTSTAMEAAEEMESLGHVFYAFKNKAN 219
Query: 272 -GEINIVYKRKEGGYGLIIP 216
GE+N+VYKR GGY +++P
Sbjct: 220 GGEVNVVYKRDAGGYAVLVP 239
[100][TOP]
>UniRef100_C0CVD1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme
DSM 15981 RepID=C0CVD1_9CLOT
Length = 176
Score = 90.5 bits (223), Expect = 1e-16
Identities = 50/139 (35%), Positives = 78/139 (56%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K +RAEE + +Y IDLV +I+R++R+ ++K D + F++ + E
Sbjct: 57 KGNTIRAEESSTDMYVSIDLVEEVIERQIRRYRKKLIDKKQAALSFSQAFIDEE------ 110
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
E+E+EDD+ IV+TK F + P EA Q+E++ H+FY F N +T
Sbjct: 111 ------------EDEQEDDI--RIVKTKKFAIKPTIPEEACLQMEMLGHNFYVFLNSDTD 156
Query: 269 EINIVYKRKEGGYGLIIPK 213
++N+VYKRK G YGLI P+
Sbjct: 157 QVNVVYKRKNGTYGLIEPE 175
[101][TOP]
>UniRef100_Q8XIE9 30S ribosomal protein S30AE family n=1 Tax=Clostridium perfringens
RepID=Q8XIE9_CLOPE
Length = 179
Score = 90.1 bits (222), Expect = 1e-16
Identities = 51/135 (37%), Positives = 81/135 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++R EE + +Y IDLV I+R++RK K + S R+ +R I+P+ ED+
Sbjct: 60 LLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRYDS------LRFAHIDPI-EDM 112
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
++ ++ +IV+TK F++ P+ EAV Q+EL+ HDF+ FQ+ ET ++N
Sbjct: 113 KEEKEA-------------KIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLN 159
Query: 260 IVYKRKEGGYGLIIP 216
+VYKRK+G YGLI P
Sbjct: 160 VVYKRKDGNYGLIEP 174
[102][TOP]
>UniRef100_B8CYM6 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Halothermothrix orenii H 168 RepID=B8CYM6_HALOH
Length = 184
Score = 90.1 bits (222), Expect = 1e-16
Identities = 53/135 (39%), Positives = 79/135 (58%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++R EE+++ +YA ID V ++R++ K K K NR K+RE E E
Sbjct: 61 ILRGEEESQDMYASIDGVLEKLERQVHKYKTK----------INR-KIRERKQEFKKEYK 109
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E+ + + EE D+ IVRTK F + P++V EA Q++L+ HDF+ F N T ++N
Sbjct: 110 EERREEILNSEE--DEFKPRIVRTKKFAIKPMSVEEAAMQMDLLGHDFFVFTNANTEQVN 167
Query: 260 IVYKRKEGGYGLIIP 216
+VYKRK+G YGLI P
Sbjct: 168 VVYKRKDGNYGLIEP 182
[103][TOP]
>UniRef100_Q0TND9 Ribosomal subunit interface protein n=6 Tax=Clostridium perfringens
RepID=Q0TND9_CLOP1
Length = 179
Score = 90.1 bits (222), Expect = 1e-16
Identities = 51/135 (37%), Positives = 81/135 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++R EE + +Y IDLV I+R++RK K + S R+ +R I+P+ ED+
Sbjct: 60 LLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRYDS------LRFAHIDPI-EDM 112
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
++ ++ +IV+TK F++ P+ EAV Q+EL+ HDF+ FQ+ ET ++N
Sbjct: 113 KEEKEA-------------KIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLN 159
Query: 260 IVYKRKEGGYGLIIP 216
+VYKRK+G YGLI P
Sbjct: 160 VVYKRKDGNYGLIEP 174
[104][TOP]
>UniRef100_A6BHR0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM
13814 RepID=A6BHR0_9FIRM
Length = 178
Score = 90.1 bits (222), Expect = 1e-16
Identities = 54/139 (38%), Positives = 79/139 (56%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K G+VR+E+++ +Y IDLV +I+R+LRK K N+L RE
Sbjct: 57 KGGLVRSEQESSDMYVSIDLVEEVIERQLRKYK-------------NKLVAREQEGGNFK 103
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
++ D+ D+ EDD +IVRTK F P+ +A Q+EL+ HDFY F N E+
Sbjct: 104 QEFFDAEDNI------EDDGEIKIVRTKKFGFKPMYPEDACVQMELLGHDFYVFCNAESD 157
Query: 269 EINIVYKRKEGGYGLIIPK 213
E+N+VY+RK G +GLI P+
Sbjct: 158 EVNVVYRRKNGTFGLIEPE 176
[105][TOP]
>UniRef100_A4ECY7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens
ATCC 25986 RepID=A4ECY7_9ACTN
Length = 194
Score = 90.1 bits (222), Expect = 1e-16
Identities = 56/136 (41%), Positives = 75/136 (55%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+R E +YA IDL + + R+LRK K K D NR VE V
Sbjct: 66 VIRVAEHGADMYAAIDLSADKVTRQLRKFKTKVVD--------NRQGGASAADVAPVERV 117
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
ED D + EE+DDL+ VR K ++ P+T +A+ Q +L+ HDFY F+N TG IN
Sbjct: 118 EDLADLLL--PEEDDDLL---VREKVIDVTPMTEEQALVQTDLLGHDFYVFENATTGLIN 172
Query: 260 IVYKRKEGGYGLIIPK 213
+VY RK GGYG+I P+
Sbjct: 173 VVYHRKNGGYGIIKPR 188
[106][TOP]
>UniRef100_UPI0001694CB6 ribosomal subunit interface protein n=1 Tax=Paenibacillus larvae
subsp. larvae BRL-230010 RepID=UPI0001694CB6
Length = 182
Score = 89.4 bits (220), Expect = 2e-16
Identities = 53/135 (39%), Positives = 78/135 (57%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAE + +YA IDLV ++R++RK K K + R G L V EP
Sbjct: 62 LLRAEVKNDDMYASIDLVVDKLERQIRKYKTKMNRRIRQEGGKRDLFVMEP--------- 112
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
SSV EE++ E+VRTK F + P+ V EA+ Q+ +V H+F+ F N +T ++N
Sbjct: 113 -----SSVANTVEEEEY--ELVRTKRFTLKPMDVEEAILQMNMVGHNFFVFANMDTDQVN 165
Query: 260 IVYKRKEGGYGLIIP 216
+VYKR++G YGLI P
Sbjct: 166 VVYKREDGRYGLIEP 180
[107][TOP]
>UniRef100_Q1IYK5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Deinococcus geothermalis DSM 11300
RepID=Q1IYK5_DEIGD
Length = 186
Score = 89.0 bits (219), Expect = 3e-16
Identities = 51/137 (37%), Positives = 79/137 (57%)
Frame = -3
Query: 626 HGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVE 447
+G++RAEE +YA ID S +++R+LRK K K H R+ P
Sbjct: 64 NGIIRAEEHHADMYAAIDRASDVLERQLRKFKTKYLRH------------RQEAAPPPQP 111
Query: 446 DVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
+ ++ D + G ++ E EIVRTK F++ P++ +AV Q+E + HDFY F+N +TG
Sbjct: 112 GLAEA-DVNAGLDDTE--FRPEIVRTKRFDLRPMSPEDAVTQMEALGHDFYVFKNMDTGG 168
Query: 266 INIVYKRKEGGYGLIIP 216
+VY+R++G YGLI P
Sbjct: 169 CAVVYRRRDGHYGLIEP 185
[108][TOP]
>UniRef100_A6TLE5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLE5_ALKMQ
Length = 177
Score = 89.0 bits (219), Expect = 3e-16
Identities = 57/136 (41%), Positives = 77/136 (56%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE E +YA ID V + +LRK K K + + + +R I VEDV
Sbjct: 60 ILRAEEKTEDMYASIDGVVNKLTSQLRKHKTKMENKTKKYE-----TIRFENIPTYVEDV 114
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
DS +S +IV+TK F M P+ EAV Q+EL+ H+FY F N ET E+N
Sbjct: 115 -DSDES-------------KIVKTKRFAMKPMHSEEAVLQMELIGHNFYMFANAETDEVN 160
Query: 260 IVYKRKEGGYGLIIPK 213
+VYKRK+G YGLI P+
Sbjct: 161 VVYKRKDGNYGLIEPE 176
[109][TOP]
>UniRef100_A8S366 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
BAA-613 RepID=A8S366_9CLOT
Length = 187
Score = 89.0 bits (219), Expect = 3e-16
Identities = 51/139 (36%), Positives = 78/139 (56%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K +RAEE + +Y IDLV II+R++R+ ++K D + F++ + E
Sbjct: 68 KGNTIRAEESSTDMYVSIDLVEEIIERQIRRYRKKLIDKKQAAISFSQAFIEE------- 120
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
E+E +DD I +IV+TK F + P EA Q+E++ H+FY F N +T
Sbjct: 121 ------------EDEVQDDEI-QIVKTKKFAIKPTIPEEACLQMEMLGHNFYVFLNADTD 167
Query: 269 EINIVYKRKEGGYGLIIPK 213
++N+VYKRK G YGLI P+
Sbjct: 168 QVNVVYKRKNGTYGLIEPE 186
[110][TOP]
>UniRef100_Q3AI28 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Synechococcus sp. CC9605 RepID=Q3AI28_SYNSC
Length = 195
Score = 88.6 bits (218), Expect = 4e-16
Identities = 50/134 (37%), Positives = 78/134 (58%), Gaps = 1/134 (0%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDL + + R+LR+ KE+ SDH H G + P + V
Sbjct: 65 VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDH-HHSHGHSASHT------PSTDVV 117
Query: 440 EDSTDSSVGE-EEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEI 264
D++ + E +L VR K F MPP+ + EA QL+L+ HDFY F+ +E+ ++
Sbjct: 118 NDASPVEASLLQGREAELPDPGVRRKYFAMPPMGLEEARRQLDLIDHDFYLFREKESDQL 177
Query: 263 NIVYKRKEGGYGLI 222
++Y+R GGYG+I
Sbjct: 178 QVIYRRNHGGYGVI 191
[111][TOP]
>UniRef100_C6D4V5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Paenibacillus sp. JDR-2 RepID=C6D4V5_PAESJ
Length = 182
Score = 88.6 bits (218), Expect = 4e-16
Identities = 50/133 (37%), Positives = 79/133 (59%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAE+ +E +Y+ ID+V ++R++RK K K + RH G L
Sbjct: 61 MLRAEDKSEDMYSSIDVVVDKLERQIRKHKTKMNRKFRHESGVKALFK------------ 108
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E + ++V +EED+L E+VRTK F + P+ V EA+ Q+ +V H+F+ F N + E+N
Sbjct: 109 EGLSQTAVSVMDEEDEL--ELVRTKRFMLKPMDVEEAILQMNMVGHNFFVFSNIDNKEVN 166
Query: 260 IVYKRKEGGYGLI 222
+VYKR +G YGLI
Sbjct: 167 VVYKRSDGKYGLI 179
[112][TOP]
>UniRef100_C4Z2Z4 Putative sigma-54 modulation protein n=1 Tax=Eubacterium eligens
ATCC 27750 RepID=C4Z2Z4_EUBE2
Length = 175
Score = 88.6 bits (218), Expect = 4e-16
Identities = 52/141 (36%), Positives = 78/141 (55%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++R+E+ + +Y IDLV +I+R+L+K K K D ++ F + V
Sbjct: 57 KGNIIRSEQVSSDMYVSIDLVEEVIERQLKKYKNKIVDKQQNAAAFAQEFV--------- 107
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
E++ +DD +K I+RTK F + P+ EA Q+EL+ H+FY F N ET
Sbjct: 108 ------------EKDYDDDEVK-IIRTKRFGIKPMDPEEACVQMELLGHNFYVFFNSETE 154
Query: 269 EINIVYKRKEGGYGLIIPKKD 207
E+N+VYKRK YGLI P+ D
Sbjct: 155 EVNVVYKRKGNTYGLIEPELD 175
[113][TOP]
>UniRef100_A3DJE4 Sigma 54 modulation protein / SSU ribosomal protein S30P n=3
Tax=Clostridium thermocellum RepID=A3DJE4_CLOTH
Length = 177
Score = 88.6 bits (218), Expect = 4e-16
Identities = 51/138 (36%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Frame = -3
Query: 623 GVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVED 444
G++RAEED+ +YA ID V ++R++R+ K K +E V D
Sbjct: 59 GLLRAEEDSPDMYASIDKVIDSLERQIRRNKTK--------------------LEKKVHD 98
Query: 443 VEDSTDSSVGEEEEEDDLIK-EIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
++ +++E ++ K E+VRTK F + P+TV EA+ Q+ L+ H F+ F N ET E
Sbjct: 99 GSLRFENIKFDDDEVEEEPKFEVVRTKKFAIKPMTVEEAILQMNLLGHQFFMFSNAETNE 158
Query: 266 INIVYKRKEGGYGLIIPK 213
N+VY+RK+G YGLI P+
Sbjct: 159 ANVVYRRKDGNYGLIEPE 176
[114][TOP]
>UniRef100_UPI00017F5ACC putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
ATCC 43255 RepID=UPI00017F5ACC
Length = 185
Score = 88.2 bits (217), Expect = 5e-16
Identities = 48/133 (36%), Positives = 82/133 (61%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAE+ + +YA ID+V + R++ K K K D ++ K + + +
Sbjct: 61 IIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKSIRFENL---------DFI 111
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
++S++ ++EE+++++ E R K F + P++ EA+ Q+ELV H+FY F+N++ EIN
Sbjct: 112 DNSSEFDDYDDEEDENIVIE--RRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEIN 169
Query: 260 IVYKRKEGGYGLI 222
IVYKRK GGYGLI
Sbjct: 170 IVYKRKAGGYGLI 182
[115][TOP]
>UniRef100_UPI00006DCB57 hypothetical protein CdifQ_04002839 n=1 Tax=Clostridium difficile
QCD-32g58 RepID=UPI00006DCB57
Length = 138
Score = 88.2 bits (217), Expect = 5e-16
Identities = 51/133 (38%), Positives = 81/133 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAE+ + +YA ID+V + R++ K K K D K N +R ++ +++
Sbjct: 12 IIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKD-----KVQNNKSIRFENLD-FIDNS 65
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ D +EE+E+ +I+ R K F + P++ EA+ Q+ELV H+FY F+N++ EIN
Sbjct: 66 SEFDDYDYDDEEDENIVIE---RRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEIN 122
Query: 260 IVYKRKEGGYGLI 222
IVYKRK GGYGLI
Sbjct: 123 IVYKRKAGGYGLI 135
[116][TOP]
>UniRef100_C9XLM7 Putative sigma 54 modulation protein n=3 Tax=Clostridium difficile
RepID=C9XLM7_CLODI
Length = 187
Score = 88.2 bits (217), Expect = 5e-16
Identities = 51/133 (38%), Positives = 81/133 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAE+ + +YA ID+V + R++ K K K D K N +R ++ +++
Sbjct: 61 IIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKD-----KVQNNKSIRFENLD-FIDNS 114
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ D +EE+E+ +I+ R K F + P++ EA+ Q+ELV H+FY F+N++ EIN
Sbjct: 115 SEFDDYDYDDEEDENIVIE---RRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEIN 171
Query: 260 IVYKRKEGGYGLI 222
IVYKRK GGYGLI
Sbjct: 172 IVYKRKAGGYGLI 184
[117][TOP]
>UniRef100_C5EVT1 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium
1_7_47FAA RepID=C5EVT1_9FIRM
Length = 187
Score = 88.2 bits (217), Expect = 5e-16
Identities = 50/139 (35%), Positives = 77/139 (55%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K +RAEE + +Y IDLV +I+R++R+ ++K D + F++ + E
Sbjct: 68 KGNTIRAEESSTDMYVSIDLVEEVIERQIRRYRKKLIDKKQAAISFSQAFIEE------- 120
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
E+E +DD I +IV+TK F + P EA Q+E++ H FY F N +T
Sbjct: 121 ------------EDEVQDDEI-QIVKTKKFAIKPTIPEEACLQMEMLGHSFYVFLNADTD 167
Query: 269 EINIVYKRKEGGYGLIIPK 213
++N+VYKRK G YGLI P+
Sbjct: 168 QVNVVYKRKNGTYGLIEPE 186
[118][TOP]
>UniRef100_B7IPV2 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group
RepID=B7IPV2_BACC2
Length = 180
Score = 88.2 bits (217), Expect = 5e-16
Identities = 54/136 (39%), Positives = 82/136 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE +YA IDLV I+R++RK K K + R ++ +K + E V
Sbjct: 60 LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVN---RKLREKGSMKTNFILPEAV---- 112
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+V +E EED+L E+VRTK F++ P+ V EA+ Q++++ H+F+ F N +T E N
Sbjct: 113 ------AVMDEVEEDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETN 164
Query: 260 IVYKRKEGGYGLIIPK 213
+VY RK+G YGLI K
Sbjct: 165 VVYGRKDGKYGLIETK 180
[119][TOP]
>UniRef100_B0G387 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC
27755 RepID=B0G387_9FIRM
Length = 177
Score = 88.2 bits (217), Expect = 5e-16
Identities = 50/139 (35%), Positives = 77/139 (55%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++R+E++++ +Y IDLV +I+R+LRK K K + F++
Sbjct: 57 KGNIIRSEQESDDMYVSIDLVEEVIERQLRKYKNKLVAKNQEGNNFSKTLFET------- 109
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
EE EDD +K IVRTK F + P+ +A Q+EL+ H+F+ F N E
Sbjct: 110 ------------EESIEDDEVK-IVRTKRFGIKPMYPEDACVQMELLGHNFFVFFNAENE 156
Query: 269 EINIVYKRKEGGYGLIIPK 213
E+N+VYKRK+G +GLI P+
Sbjct: 157 EVNVVYKRKDGSFGLIEPE 175
[120][TOP]
>UniRef100_A5KKP2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC
27756 RepID=A5KKP2_9FIRM
Length = 198
Score = 88.2 bits (217), Expect = 5e-16
Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEK--DSDHGRHMKGFNRLKVREPVIEP 456
K ++R+E+ + +Y IDLV +I+R+LRK K K G +++ IE
Sbjct: 70 KGSIIRSEQTSSDMYVSIDLVEEVIERQLRKYKNKLVAKSQGHPTAAVPSGSIKKEFIES 129
Query: 455 VVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEE 276
+E +DD I+ IVRTK F + P+ +A Q+EL+ H F+ F N E
Sbjct: 130 -------------DDESSDDDEIR-IVRTKKFGIKPMFPEDACIQMELLGHSFFVFSNAE 175
Query: 275 TGEINIVYKRKEGGYGLIIPK 213
T E+N+VYKRK+G +GLI P+
Sbjct: 176 TDEVNVVYKRKDGSFGLIEPE 196
[121][TOP]
>UniRef100_B9NF07 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NF07_POPTR
Length = 127
Score = 88.2 bits (217), Expect = 5e-16
Identities = 46/90 (51%), Positives = 61/90 (67%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
+HGVVRAEED+ET+YA IDLV +IIQ KLRK+KE +SDHGRHMKG NRLK+R+
Sbjct: 50 RHGVVRAEEDSETIYATIDLVLSIIQSKLRKMKE-ESDHGRHMKGLNRLKIRD------- 101
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTF 360
D+ +E+DD + E+V ++
Sbjct: 102 -------DADAVSRKEDDDYLDELVSVASY 124
[122][TOP]
>UniRef100_UPI00017F60C6 putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
QCD-23m63 RepID=UPI00017F60C6
Length = 185
Score = 87.8 bits (216), Expect = 7e-16
Identities = 49/133 (36%), Positives = 81/133 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAE+ + +YA ID+V + R++ K K K D ++ K V + +
Sbjct: 61 IIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKSIRFENV---------DFI 111
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
++S++ ++EE ++++ E R K F + P++ EA+ Q+ELV H+FY F+N++ EIN
Sbjct: 112 DNSSEFDDYDDEEYENIVIE--RRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEIN 169
Query: 260 IVYKRKEGGYGLI 222
IVYKRK GGYGLI
Sbjct: 170 IVYKRKAGGYGLI 182
[123][TOP]
>UniRef100_UPI0001789185 sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789185
Length = 188
Score = 87.8 bits (216), Expect = 7e-16
Identities = 50/133 (37%), Positives = 77/133 (57%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAE+ ++ +YA ID V ++R++RK K K + + G L + E+
Sbjct: 62 VLRAEDRSDDMYASIDAVVDKLERQIRKHKTKLNRKIKQEGGLKTL---------IAENG 112
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+T E+ E D+ E+VRTK F M P+ V EA+ Q+ +V H+F+ F N +T E+N
Sbjct: 113 AAATSQVDAEQVEYDEDEYEVVRTKRFTMKPMDVEEAILQMNMVGHNFFVFSNIDTQEVN 172
Query: 260 IVYKRKEGGYGLI 222
+VYKR +G YGLI
Sbjct: 173 VVYKRDDGKYGLI 185
[124][TOP]
>UniRef100_Q1WSW6 Ribosome-associated factor Y n=1 Tax=Lactobacillus salivarius
UCC118 RepID=Q1WSW6_LACS1
Length = 184
Score = 87.8 bits (216), Expect = 7e-16
Identities = 53/138 (38%), Positives = 80/138 (57%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE + +YA IDLV+ ++R++RK K K + R KGF + PV +
Sbjct: 64 VLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKNFE-----FAPVAD-- 115
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E+EE +D EIVRTK + P+ EAV Q++++ HDF+ +++ E G I
Sbjct: 116 ---------EKEEVEDKKFEIVRTKRLSLKPMDSEEAVLQMDMLGHDFFIYEDAENGGIY 166
Query: 260 IVYKRKEGGYGLIIPKKD 207
IVY+R++G YGLI +D
Sbjct: 167 IVYRRRDGRYGLIEASED 184
[125][TOP]
>UniRef100_D0CH01 Sigma 54 modulation protein n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CH01_9SYNE
Length = 195
Score = 87.8 bits (216), Expect = 7e-16
Identities = 51/133 (38%), Positives = 76/133 (57%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA IDL + + R+LR+ KE+ SDH H G + + V
Sbjct: 65 VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDH-HHSHGHSASHTPSTDVVNDASPV 123
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E S G E E D VR K F MPP+ + +A QL+L+ HDFY F+ +E+ ++
Sbjct: 124 ESSLLQ--GREAELPD---PGVRRKYFAMPPMGLEDARRQLDLIDHDFYLFREKESDQLQ 178
Query: 260 IVYKRKEGGYGLI 222
++Y+R GGYG+I
Sbjct: 179 VIYRRNHGGYGVI 191
[126][TOP]
>UniRef100_C5VNV1 Ribosomal subunit interface protein n=1 Tax=Clostridium botulinum D
str. 1873 RepID=C5VNV1_CLOBO
Length = 178
Score = 87.8 bits (216), Expect = 7e-16
Identities = 52/138 (37%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEK--DSDHGRHMKGFNRLKVREPVIEPVVE 447
++RAEE +YA IDLV ++R++RK K K HG +K + + E + +
Sbjct: 60 ILRAEEANNDMYAAIDLVLEKLERQIRKQKTKLEKRKHGDALKF-------QFIPEYIPK 112
Query: 446 DVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
D ED+ +S +IV+TK F + P++ EAV Q+EL+ H+F+ F+N +T E
Sbjct: 113 DAEDNVES-------------KIVKTKKFAVKPMSNEEAVLQMELLGHNFFVFRNSDTDE 159
Query: 266 INIVYKRKEGGYGLIIPK 213
+N++YKRK+G YGLI P+
Sbjct: 160 VNVLYKRKDGQYGLIEPE 177
[127][TOP]
>UniRef100_C9RVC1 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Geobacillus RepID=C9RVC1_9BACI
Length = 182
Score = 87.8 bits (216), Expect = 7e-16
Identities = 56/135 (41%), Positives = 77/135 (57%)
Frame = -3
Query: 626 HGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVE 447
H ++RAEE E +YA IDLV+ ++R++RK K K + R + K+ PV
Sbjct: 61 HLLLRAEERHEDMYAAIDLVTDKLERQIRKHKTKVNRKLRDRE--KEAKLAAPV------ 112
Query: 446 DVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
S +S E EEE EIVRTK F + P+ EA+ Q+ L+ H+F+ F N ET
Sbjct: 113 ----SIGASAAENEEEF----EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNR 164
Query: 266 INIVYKRKEGGYGLI 222
NIVY+RK+G YGLI
Sbjct: 165 TNIVYRRKDGKYGLI 179
[128][TOP]
>UniRef100_C2WEE0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus Rock3-44
RepID=C2WEE0_BACCE
Length = 180
Score = 87.8 bits (216), Expect = 7e-16
Identities = 56/136 (41%), Positives = 82/136 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE +YA IDLV I+R++RK K K NR K+RE +
Sbjct: 60 LLRAEETHSDMYAAIDLVVDKIERQIRKHKTK----------VNR-KLREKGSPKTTFIL 108
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+S ++ EE +EDDL E+VRTK F++ P+ V EA+ Q++++ H+F+ F N +T E N
Sbjct: 109 TES--AATLEEVKEDDL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETN 164
Query: 260 IVYKRKEGGYGLIIPK 213
+VY RK+G YGLI K
Sbjct: 165 VVYGRKDGKYGLIETK 180
[129][TOP]
>UniRef100_B7HEI9 Ribosomal subunit interface protein n=9 Tax=Bacillus cereus group
RepID=B7HEI9_BACC4
Length = 180
Score = 87.8 bits (216), Expect = 7e-16
Identities = 54/136 (39%), Positives = 82/136 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE +YA IDLV I+R++RK K K + R ++ +K + E V
Sbjct: 60 LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVN---RKLREKGSIKTNFILPEAV---- 112
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+V +E EED+L E+VRTK F++ P+ V EA+ Q++++ H+F+ F N +T E N
Sbjct: 113 ------AVLDEVEEDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETN 164
Query: 260 IVYKRKEGGYGLIIPK 213
+VY RK+G YGLI K
Sbjct: 165 VVYGRKDGKYGLIETK 180
[130][TOP]
>UniRef100_B5UPY3 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group
RepID=B5UPY3_BACCE
Length = 180
Score = 87.8 bits (216), Expect = 7e-16
Identities = 54/136 (39%), Positives = 82/136 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE +YA IDLV I+R++RK K K + R ++ +K + E V
Sbjct: 60 LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVN---RKLREKGSMKTNFILPEAV---- 112
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+V +E EED+L E+VRTK F++ P+ V EA+ Q++++ H+F+ F N +T E N
Sbjct: 113 ------AVLDEVEEDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETN 164
Query: 260 IVYKRKEGGYGLIIPK 213
+VY RK+G YGLI K
Sbjct: 165 VVYGRKDGKYGLIETK 180
[131][TOP]
>UniRef100_A8J8B2 Plastid-specific ribosomal protein 1 n=1 Tax=Chlamydomonas
reinhardtii RepID=A8J8B2_CHLRE
Length = 286
Score = 87.8 bits (216), Expect = 7e-16
Identities = 54/152 (35%), Positives = 85/152 (55%), Gaps = 9/152 (5%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHM-KGFNRLKVREPV 465
++T ++GVVR E+ +YA IDLV I+ KL+KIKEK G + + V E
Sbjct: 132 IYTLRNGVVRVEDAENNLYAAIDLVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEED 191
Query: 464 IEPVVEDVEDSTDSSVGEEEEEDDLIK-------EIVRTKTFEMP-PLTVAEAVEQLELV 309
+ +++V+ T EE+ + + ++R+KT + P+TV EA++ LE V
Sbjct: 192 FQEYLKEVKMDTQLFDKEEQLQRQFAELNRIYPANVMRSKTVVLADPITVEEAIDALEAV 251
Query: 308 SHDFYGFQNEETGEINIVYKRKEGGYGLIIPK 213
H FY F+ T + IVYKR+ GGYG+I+P+
Sbjct: 252 GHSFYVFREMTTDTVQIVYKRESGGYGVIVPQ 283
[132][TOP]
>UniRef100_C2U573 Ribosome-associated factor Y n=3 Tax=Bacillus cereus
RepID=C2U573_BACCE
Length = 180
Score = 87.4 bits (215), Expect = 9e-16
Identities = 54/136 (39%), Positives = 82/136 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE +YA IDLV I+R++RK K K + R ++ +K + E V
Sbjct: 60 LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVN---RKLREKGSVKTNFILPEAV---- 112
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+V +E EED+L E+VRTK F++ P+ V EA+ Q++++ H+F+ F N +T E N
Sbjct: 113 ------AVLDEVEEDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETN 164
Query: 260 IVYKRKEGGYGLIIPK 213
+VY RK+G YGLI K
Sbjct: 165 VVYGRKDGKYGLIETK 180
[133][TOP]
>UniRef100_C2QJQ3 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Bacillus cereus R309803 RepID=C2QJQ3_BACCE
Length = 180
Score = 87.4 bits (215), Expect = 9e-16
Identities = 54/136 (39%), Positives = 82/136 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE +YA IDLV I+R++RK K K + R ++ +K + E V
Sbjct: 60 LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVN---RKLREKGSVKTNFILPEAV---- 112
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+V +E EED+L E+VRTK F++ P+ V EA+ Q++++ H+F+ F N +T E N
Sbjct: 113 ------AVLDEVEEDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETN 164
Query: 260 IVYKRKEGGYGLIIPK 213
+VY RK+G YGLI K
Sbjct: 165 VVYGRKDGKYGLIETK 180
[134][TOP]
>UniRef100_C2C307 Ribosome-associated inhibitor protein Y n=1 Tax=Listeria grayi DSM
20601 RepID=C2C307_LISGR
Length = 189
Score = 87.4 bits (215), Expect = 9e-16
Identities = 57/141 (40%), Positives = 80/141 (56%), Gaps = 3/141 (2%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEP---VV 450
V+RAEE +YA +DL++ ++R++RK K K NR K R+ E
Sbjct: 64 VLRAEETNGDLYASVDLIADKLERQIRKHKTK----------VNR-KFRDKGSEKDYFAF 112
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
++ DST S EE + D EIVRTK+F + P+ EAV Q+ L+ H+F+ F + ET
Sbjct: 113 SEINDSTPS----EETDSDYDIEIVRTKSFSLKPMDSEEAVLQMNLLGHNFFVFNDAETN 168
Query: 269 EINIVYKRKEGGYGLIIPKKD 207
NIVYKRK+G YGLI + D
Sbjct: 169 GTNIVYKRKDGKYGLIETEAD 189
[135][TOP]
>UniRef100_B5CNW3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC
29176 RepID=B5CNW3_9FIRM
Length = 186
Score = 87.4 bits (215), Expect = 9e-16
Identities = 53/142 (37%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++R+E+ ++ +Y IDLV +I+R+LRK K N+L R
Sbjct: 57 KGNIIRSEQTSDNMYVSIDLVEEVIERQLRKYK-------------NKLVARSQGHPTSY 103
Query: 449 EDVEDSTDSSVGEEEE---EDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNE 279
+S E E+ EDD I +IVRTK F + P+ +A Q+EL+ H F+ F N
Sbjct: 104 TSTGNSFRKEFFETEDDAAEDDEI-QIVRTKKFGIKPMFPEDACIQMELLGHSFFVFSNA 162
Query: 278 ETGEINIVYKRKEGGYGLIIPK 213
ET E+N+VYKRK+G +GLI P+
Sbjct: 163 ETDEVNVVYKRKDGSFGLIEPE 184
[136][TOP]
>UniRef100_C1CWW9 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Deinococcus deserti VCD115 RepID=C1CWW9_DEIDV
Length = 188
Score = 87.0 bits (214), Expect = 1e-15
Identities = 51/137 (37%), Positives = 76/137 (55%)
Frame = -3
Query: 626 HGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVE 447
+G++RAEE +YA ID S +++R+LRK K R+MK + V +P P
Sbjct: 64 NGIIRAEEHHSDMYAAIDKASDVLERQLRKFKT------RYMKQRHET-VPQPGPGPAEA 116
Query: 446 DVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
DV D + + + EIVR K F+M P++ +AV Q+E + HDFY F N +
Sbjct: 117 DVNAGLD-------DVSEFMPEIVRQKRFDMRPMSPEDAVTQMEALGHDFYVFMNMGSNA 169
Query: 266 INIVYKRKEGGYGLIIP 216
+VY+R++G YGLI P
Sbjct: 170 CGVVYRRRDGHYGLIEP 186
[137][TOP]
>UniRef100_A7GUW3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GUW3_BACCN
Length = 179
Score = 87.0 bits (214), Expect = 1e-15
Identities = 55/136 (40%), Positives = 81/136 (59%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE +YA IDLV I+R++RK K K NR K+RE +
Sbjct: 60 LLRAEETHSDMYAAIDLVVDKIERQIRKHKTK----------VNR-KLREKGSAKTAFIL 108
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
D +G+EE ++D + E+VRTK F++ P+ V EA+ Q++++ H+F+ F N +T E N
Sbjct: 109 PDQ----LGQEEVQEDEL-ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETN 163
Query: 260 IVYKRKEGGYGLIIPK 213
IVY RK+G YGLI K
Sbjct: 164 IVYGRKDGKYGLIEAK 179
[138][TOP]
>UniRef100_C2KX79 Ribosome-associated inhibitor A n=1 Tax=Oribacterium sinus F0268
RepID=C2KX79_9FIRM
Length = 176
Score = 87.0 bits (214), Expect = 1e-15
Identities = 50/140 (35%), Positives = 76/140 (54%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K V+RAEE +Y IDLV +++R++RK K K RH
Sbjct: 57 KGSVIRAEEATPDMYQSIDLVVDVLERQIRKYKNKLIQ--RH------------------ 96
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
+ D + + E+ +D+ +IVRTK ++ P+T EA Q+EL+ H F+ FQ+ TG
Sbjct: 97 QAASDFSSEFIEEKPAQDEEEIKIVRTKHIDLKPMTAEEACLQMELLGHSFFVFQDGNTG 156
Query: 269 EINIVYKRKEGGYGLIIPKK 210
++N+VYKRK YGLI P++
Sbjct: 157 KVNVVYKRKANSYGLIEPEE 176
[139][TOP]
>UniRef100_C2D8Z3 Possible ribosome-associated inhibitor A n=1 Tax=Atopobium vaginae
DSM 15829 RepID=C2D8Z3_9ACTN
Length = 192
Score = 87.0 bits (214), Expect = 1e-15
Identities = 53/139 (38%), Positives = 77/139 (55%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
++ VVR E +E +YA ID S + R+LRK K + D + + + P P
Sbjct: 64 RNNVVRVEASSEDMYAAIDAASDKVTRQLRKYKTRIIDR--------KQRSQAPAPAPS- 114
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
+D+ D D E +DD++ VR K ++ P+T EA+ Q +L+ HDFY F+N TG
Sbjct: 115 KDLSDLID-----EVADDDML---VREKYIDLHPMTEEEALVQTDLIGHDFYVFENATTG 166
Query: 269 EINIVYKRKEGGYGLIIPK 213
IN+VY R GGYG+I PK
Sbjct: 167 LINVVYHRHNGGYGIIKPK 185
[140][TOP]
>UniRef100_B7AN97 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus
ATCC 43243 RepID=B7AN97_9BACE
Length = 179
Score = 87.0 bits (214), Expect = 1e-15
Identities = 49/139 (35%), Positives = 73/139 (52%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++R+E+ + +Y IDLV +I+R+L+K K K D + F
Sbjct: 60 KGSIIRSEQVSNDMYVSIDLVEEVIERQLKKYKNKLIDKQQDAAAF-------------- 105
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
+ +E +DD +I+RTK F++ P+ EA Q+EL+ H FY F N ET
Sbjct: 106 ------AQEYIDKEYVDDDADVKIIRTKRFDVKPMDPEEACVQMELLGHSFYVFFNSETE 159
Query: 269 EINIVYKRKEGGYGLIIPK 213
+IN+VYKRK YGLI P+
Sbjct: 160 QINVVYKRKGNTYGLIEPE 178
[141][TOP]
>UniRef100_Q72XS8 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group
RepID=Q72XS8_BACC1
Length = 180
Score = 87.0 bits (214), Expect = 1e-15
Identities = 53/136 (38%), Positives = 82/136 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE +YA IDLV ++R++RK K K + R ++ +K + E V
Sbjct: 60 LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVN---RKLREKGSMKTNFILPEAV---- 112
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+V +E EED+L E+VRTK F++ P+ V EA+ Q++++ H+F+ F N +T E N
Sbjct: 113 ------AVLDEVEEDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETN 164
Query: 260 IVYKRKEGGYGLIIPK 213
+VY RK+G YGLI K
Sbjct: 165 VVYGRKDGKYGLIETK 180
[142][TOP]
>UniRef100_B0P2P9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1
RepID=B0P2P9_9CLOT
Length = 179
Score = 87.0 bits (214), Expect = 1e-15
Identities = 50/139 (35%), Positives = 79/139 (56%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++RAEE +E +Y IDLV +I+R++R+ K + + F + + +
Sbjct: 60 KGHIIRAEEGSEDMYVSIDLVVDVIERQIRRYKTRLMNQKYDGTSFKQEFMEQ------- 112
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
E++ EDD I+ I+R+K F + P+ V EA Q+EL+ HDF+ F+N +T
Sbjct: 113 ------------EDDVEDDEIR-IIRSKKFAIKPMDVEEACVQMELLGHDFFVFRNADTF 159
Query: 269 EINIVYKRKEGGYGLIIPK 213
E+N+VYKRK YGLI P+
Sbjct: 160 EVNVVYKRKGNTYGLIEPE 178
[143][TOP]
>UniRef100_C4L5L1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Exiguobacterium sp. AT1b RepID=C4L5L1_EXISA
Length = 187
Score = 86.7 bits (213), Expect = 2e-15
Identities = 49/136 (36%), Positives = 80/136 (58%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAE+ +YA IDLV ++R++RK K K + GR +G + + +
Sbjct: 63 LLRAEDINLDMYAAIDLVVDKLERQIRKHKTKLNRKGRGKEGG---------VGEYFKSL 113
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E D+ +E+E +L E+VRTK F + P+ EA+ Q++++ H F+ F + ETG N
Sbjct: 114 EGPDDTPAVYDEDEAEL--ELVRTKRFTLKPMDTEEAILQMDMLGHSFFVFSDAETGNTN 171
Query: 260 IVYKRKEGGYGLIIPK 213
+VY+RK+G YGLI P+
Sbjct: 172 VVYRRKDGKYGLIEPE 187
[144][TOP]
>UniRef100_D0BMS6 Ribosomal subunit interface protein n=1 Tax=Granulicatella elegans
ATCC 700633 RepID=D0BMS6_9LACT
Length = 182
Score = 86.7 bits (213), Expect = 2e-15
Identities = 53/133 (39%), Positives = 79/133 (59%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE + +Y IDLV ++R++RK K K + R KGF+ + V V EPV
Sbjct: 64 VLRAEETSGDLYGSIDLVIDKLERQVRKYKTKINRKSRE-KGFD-IPVAPVVPEPV---- 117
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ED+ + EIVRTK ++ P+ EAV Q+ ++ H+F+ +Q+ ET E +
Sbjct: 118 ------------DEDESVLEIVRTKRVDLKPMDSEEAVLQMNMLGHNFFIYQDAETNETH 165
Query: 260 IVYKRKEGGYGLI 222
IVY+RK+G YGLI
Sbjct: 166 IVYRRKDGKYGLI 178
[145][TOP]
>UniRef100_C8W7H2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Atopobium parvulum DSM 20469 RepID=C8W7H2_ATOPD
Length = 196
Score = 86.7 bits (213), Expect = 2e-15
Identities = 47/139 (33%), Positives = 74/139 (53%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
++ VVR ++ +YA ID + + R+LRK K K + HMK + + + + ++
Sbjct: 64 RNNVVRVTASSDDMYAAIDEAADKVSRQLRKYKTKVVERRHHMKSERGIALTQEDLANLI 123
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
E +DL ++VR K ++ P+T EA+ Q +L+ HDFY F N TG
Sbjct: 124 EI-------------PAEDLDDQLVREKYVDLEPMTEEEALVQTDLLGHDFYVFVNSSTG 170
Query: 269 EINIVYKRKEGGYGLIIPK 213
N++Y RK GGYG+I PK
Sbjct: 171 LTNVIYHRKNGGYGIIKPK 189
[146][TOP]
>UniRef100_C6MPU4 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacter sp. M18 RepID=C6MPU4_9DELT
Length = 182
Score = 86.7 bits (213), Expect = 2e-15
Identities = 51/141 (36%), Positives = 77/141 (54%)
Frame = -3
Query: 635 TKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEP 456
T K ++A E+ +YA ID VS I+R+LR+ KE R+K +P +
Sbjct: 55 TAKGITIKAAEETNDMYASIDAVSDKIERQLRRFKE-------------RIKAHKPAADA 101
Query: 455 VVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEE 276
V+ + + G EE + I++TK+F M P++V EAV Q+EL+ DF +
Sbjct: 102 RERQVQKAIVQAQGIEEGTQTPV--IIKTKSFTMKPMSVEEAVMQMELLHKDFLVYTESS 159
Query: 275 TGEINIVYKRKEGGYGLIIPK 213
T IN+VY+RK+G YGLI P+
Sbjct: 160 TETINVVYRRKDGNYGLISPE 180
[147][TOP]
>UniRef100_B7HX18 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group
RepID=B7HX18_BACC7
Length = 180
Score = 86.3 bits (212), Expect = 2e-15
Identities = 53/136 (38%), Positives = 81/136 (59%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE +YA IDLV ++R++RK K K + R ++ +K + E V
Sbjct: 60 LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVN---RKLREKGSMKTNFILPEAV---- 112
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+V +E EED L E+VRTK F++ P+ V EA+ Q++++ H+F+ F N +T E N
Sbjct: 113 ------AVLDEVEEDQL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETN 164
Query: 260 IVYKRKEGGYGLIIPK 213
+VY RK+G YGLI K
Sbjct: 165 VVYGRKDGKYGLIETK 180
[148][TOP]
>UniRef100_B7A6F1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Thermus
aquaticus Y51MC23 RepID=B7A6F1_THEAQ
Length = 186
Score = 86.3 bits (212), Expect = 2e-15
Identities = 52/136 (38%), Positives = 79/136 (58%)
Frame = -3
Query: 623 GVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVED 444
G++R EE+ + +YA ID + ++ +L++ KE+ RH + P V D
Sbjct: 65 GLLRVEEEDQDLYAAIDRMVDRLEIQLKRYKERRFVGRRH--------TYQGPPPPEVRD 116
Query: 443 VEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEI 264
+E ++ + EEE+ IVR K FEM P+ EAV Q+E + HDF+ F+N +T EI
Sbjct: 117 ME-----ALRKPEEEEG--PRIVRVKRFEMKPMDPEEAVFQMEALGHDFFVFRNAKTDEI 169
Query: 263 NIVYKRKEGGYGLIIP 216
N+VY+RK+G YGLI P
Sbjct: 170 NVVYRRKDGNYGLIEP 185
[149][TOP]
>UniRef100_A8SVF0 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC
27759 RepID=A8SVF0_9FIRM
Length = 175
Score = 86.3 bits (212), Expect = 2e-15
Identities = 51/139 (36%), Positives = 81/139 (58%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++RAE+ ++ +Y IDLV +I+R++ K ++K D +++ N
Sbjct: 57 KGHIIRAEQVSDDMYVSIDLVVEVIERQVTKHRKKLIDKEQNVAYLN------------- 103
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
++ V E+ E+DD IK IVRTK F + P+ +A Q++L+ H+FY F+N ET
Sbjct: 104 -------EAFVDEDIEDDDDIK-IVRTKKFAVKPMYPEDACIQMDLLGHNFYVFRNAETD 155
Query: 269 EINIVYKRKEGGYGLIIPK 213
E+N+VYKRK YGLI P+
Sbjct: 156 EVNVVYKRKGNTYGLIEPE 174
[150][TOP]
>UniRef100_B8BRE6 Light-repressed protein a n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BRE6_THAPS
Length = 198
Score = 86.3 bits (212), Expect = 2e-15
Identities = 56/144 (38%), Positives = 81/144 (56%), Gaps = 2/144 (1%)
Frame = -3
Query: 635 TKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEK--DSDHGRHMKGFNRLKVREPVI 462
T K R E + +YA IDLV+ + RKLRK KE+ D HG G N +V +
Sbjct: 65 TLKGTTFRVAESSPDMYASIDLVAARLARKLRKYKERRLDGYHGGPNMGENIAEVLNAI- 123
Query: 461 EPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQN 282
+V++S D G EEE + V TK + P+++ EA+ L+ + HDFY F++
Sbjct: 124 -----EVDESED---GAEEESYIDPDQAVVTKV-KSTPISIKEAIFALDYIDHDFYVFRD 174
Query: 281 EETGEINIVYKRKEGGYGLIIPKK 210
EET E+++VYKR GG GLI P++
Sbjct: 175 EETNEVSVVYKRNAGGVGLIQPEQ 198
[151][TOP]
>UniRef100_Q4L4H7 Uncharacterized protein SH2139 n=1 Tax=Staphylococcus haemolyticus
JCSC1435 RepID=Y2139_STAHJ
Length = 192
Score = 86.3 bits (212), Expect = 2e-15
Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 3/139 (2%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEK-DSDHGRHMKGFNRLKVREPVIEPV 453
K+ +RAEE + +YA IDLV++ ++R++RK K + + H H EP E
Sbjct: 61 KNVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKHKTH---------GEP--EAF 109
Query: 452 VEDVEDSTDSSVGEEEEE--DDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNE 279
V +V+++ +V + E +D EI+R+K F + P+ EAV Q+EL+ HDFY F +
Sbjct: 110 VAEVQEAPPENVDDVNAEPTNDSEIEIIRSKQFSLKPMDSEEAVLQMELLGHDFYIFTDR 169
Query: 278 ETGEINIVYKRKEGGYGLI 222
ET +IVYKRK+G YGLI
Sbjct: 170 ETDGTSIVYKRKDGKYGLI 188
[152][TOP]
>UniRef100_Q5KV92 Ribosomal protein S30EA n=1 Tax=Geobacillus kaustophilus
RepID=Q5KV92_GEOKA
Length = 183
Score = 85.9 bits (211), Expect = 3e-15
Identities = 54/135 (40%), Positives = 77/135 (57%)
Frame = -3
Query: 626 HGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVE 447
H ++RAEE E +YA IDLV+ ++R++RK K K + R + K+ PV
Sbjct: 61 HLLLRAEERHEDMYAAIDLVTDKLERQIRKHKTKVNRKLRDRE--KEAKLAAPV------ 112
Query: 446 DVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
+ +S E EE+ EIVRTK F + P+ EA+ Q+ L+ H+F+ F N ET
Sbjct: 113 ----PSGASAAENNEEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNR 165
Query: 266 INIVYKRKEGGYGLI 222
NIVY+RK+G YGLI
Sbjct: 166 TNIVYRRKDGKYGLI 180
[153][TOP]
>UniRef100_C6E4W8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacter sp. M21 RepID=C6E4W8_GEOSM
Length = 182
Score = 85.9 bits (211), Expect = 3e-15
Identities = 50/141 (35%), Positives = 80/141 (56%)
Frame = -3
Query: 635 TKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEP 456
T K ++A E+ +YA ID VS I+R+LR+ KE+ H R +V++ ++E
Sbjct: 55 TAKGITIKAAEETNDMYASIDAVSDKIERQLRRFKERIKAHKPAPDARER-QVQKSIVE- 112
Query: 455 VVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEE 276
+ +E+ + V I++TK+F M P++V EAV Q+EL+ DF +
Sbjct: 113 -AQSIEEGAQAPV------------IIKTKSFSMKPMSVEEAVMQMELLHKDFLVYTESS 159
Query: 275 TGEINIVYKRKEGGYGLIIPK 213
T +IN+VY+RK+G YGLI P+
Sbjct: 160 TEKINVVYRRKDGNYGLISPE 180
[154][TOP]
>UniRef100_C5D7S1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. WCH70 RepID=C5D7S1_GEOSW
Length = 182
Score = 85.9 bits (211), Expect = 3e-15
Identities = 55/133 (41%), Positives = 79/133 (59%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE + +YA IDLV+ ++R++RK K K NR K+R + V+ V
Sbjct: 63 LLRAEERHDDMYAAIDLVADKLERQIRKHKTK----------VNR-KLRNKETKQVL--V 109
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ + V E EEE+ EIVRTK F + P+ EA+ Q+ L+ H+F+ F N ET N
Sbjct: 110 TQNNNPPVEENEEEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTN 166
Query: 260 IVYKRKEGGYGLI 222
IVY+RK+G YGLI
Sbjct: 167 IVYRRKDGKYGLI 179
[155][TOP]
>UniRef100_B5EEZ7 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacter bemidjiensis Bem RepID=B5EEZ7_GEOBB
Length = 182
Score = 85.9 bits (211), Expect = 3e-15
Identities = 50/141 (35%), Positives = 80/141 (56%)
Frame = -3
Query: 635 TKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEP 456
T K ++A E+ +YA ID VS I+R+LR+ KE+ H R +V++ ++E
Sbjct: 55 TAKGITIKAAEETNDMYASIDAVSDKIERQLRRFKERIKAHKPAPDARER-QVQKSIVE- 112
Query: 455 VVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEE 276
+ +E+ + V I++TK+F M P++V EAV Q+EL+ DF +
Sbjct: 113 -AQSIEEGAQAPV------------IIKTKSFSMKPMSVEEAVMQMELLHKDFLVYTESS 159
Query: 275 TGEINIVYKRKEGGYGLIIPK 213
T +IN+VY+RK+G YGLI P+
Sbjct: 160 TEKINVVYRRKDGNYGLISPE 180
[156][TOP]
>UniRef100_C3AT15 Ribosome-associated factor Y n=3 Tax=Bacillus RepID=C3AT15_BACMY
Length = 180
Score = 85.9 bits (211), Expect = 3e-15
Identities = 52/136 (38%), Positives = 81/136 (59%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE +YA IDLV ++R++RK K K + R ++ K + EP
Sbjct: 60 LLRAEETHSDMYAAIDLVVDKVERQIRKHKTKVN---RKLREKGSPKTAFILTEP----- 111
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
++ EE +ED+L E+VRTK F++ P+ V EA+ Q++++ H+F+ F N +T E N
Sbjct: 112 -----AATLEEVKEDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETN 164
Query: 260 IVYKRKEGGYGLIIPK 213
+VY RK+G YGLI K
Sbjct: 165 VVYGRKDGKYGLIETK 180
[157][TOP]
>UniRef100_C0BYR7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
15053 RepID=C0BYR7_9CLOT
Length = 178
Score = 85.9 bits (211), Expect = 3e-15
Identities = 52/139 (37%), Positives = 77/139 (55%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++R+E+ + +Y IDLV +I+R+LRK K K RH +G N R+ E
Sbjct: 57 KGNIIRSEQVSSDMYVSIDLVEEVIERQLRKYKNKLV--ARHQEGGN---FRQEFFE--- 108
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
E EDD +IVRTK F + P+ +A Q++L+ HDF+ F N +T
Sbjct: 109 -----------SEYATEDDDEVKIVRTKRFGIKPMYPEDACIQMDLLGHDFFVFCNADTD 157
Query: 269 EINIVYKRKEGGYGLIIPK 213
E+N+VY+RK G +GLI P+
Sbjct: 158 EVNVVYRRKNGTFGLIEPE 176
[158][TOP]
>UniRef100_B9M9R3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacter sp. FRC-32 RepID=B9M9R3_GEOSF
Length = 181
Score = 85.5 bits (210), Expect = 3e-15
Identities = 48/143 (33%), Positives = 79/143 (55%)
Frame = -3
Query: 635 TKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEP 456
T K ++A E+ +YA +D V I+R+LR+ KE R+K +P +
Sbjct: 55 TAKGITIKAAEETNDMYAAVDAVVDKIERQLRRYKE-------------RIKAHKPATDS 101
Query: 455 VVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEE 276
V+ S + E++++ +I +RTKTF + P++V EAV Q++L+ DF +
Sbjct: 102 RERIVQKSIVEAESIEQQKEPVI---IRTKTFSLKPMSVEEAVMQMDLLHKDFLVYTEAA 158
Query: 275 TGEINIVYKRKEGGYGLIIPKKD 207
T IN++Y+RK+G YGLI P K+
Sbjct: 159 TESINVIYRRKDGNYGLIEPNKE 181
[159][TOP]
>UniRef100_B7GL70 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Anoxybacillus
flavithermus WK1 RepID=B7GL70_ANOFW
Length = 182
Score = 85.5 bits (210), Expect = 3e-15
Identities = 55/133 (41%), Positives = 76/133 (57%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE + +YA IDLV ++R++RK K K NR K+RE V
Sbjct: 63 VLRAEERHDDMYAAIDLVVDKLERQIRKHKTK----------VNR-KMREKEANGVTLT- 110
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+T EE EE++ E+VRTK F + P+ EA+ Q+ ++ H+FY F N ET N
Sbjct: 111 --ATVPVATEEHEEEEF--EVVRTKRFSLKPMDSEEAILQMNMLGHNFYVFINAETNRTN 166
Query: 260 IVYKRKEGGYGLI 222
+VYKRK+G YGLI
Sbjct: 167 VVYKRKDGKYGLI 179
[160][TOP]
>UniRef100_C6QNN3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. Y4.1MC1 RepID=C6QNN3_9BACI
Length = 183
Score = 85.5 bits (210), Expect = 3e-15
Identities = 52/133 (39%), Positives = 79/133 (59%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE + +YA IDLV+ ++R++RK K K + +L+ R+ ++ V V
Sbjct: 63 LLRAEERHDDMYAAIDLVADKLERQIRKHKTKVN---------RKLRDRDKEVKQVAT-V 112
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ + + EEEE EIVRTK F + P+ EA+ Q+ L+ H+F+ F N ET N
Sbjct: 113 QTNAPAEDNEEEEF-----EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTN 167
Query: 260 IVYKRKEGGYGLI 222
IVY+RK+G YGLI
Sbjct: 168 IVYRRKDGKYGLI 180
[161][TOP]
>UniRef100_C5RGA6 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium cellulovorans 743B RepID=C5RGA6_CLOCL
Length = 180
Score = 85.5 bits (210), Expect = 3e-15
Identities = 53/141 (37%), Positives = 81/141 (57%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K+ ++R EE E++YA IDLV ++ ++RK K K S K + L+
Sbjct: 57 KNVILRGEEATESMYASIDLVIDKLEGQMRKNKTKLSKQ----KYADSLRFY-------- 104
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
D + + E EEE +IV+TK F + P+ EAV Q+EL+ H+F+ F ++ET
Sbjct: 105 -DALSKGELAATEVEEES----KIVKTKRFAIKPMNAEEAVLQMELLGHNFFVFMDDETS 159
Query: 269 EINIVYKRKEGGYGLIIPKKD 207
E+N+VYKRK+G +GLI P+ D
Sbjct: 160 EVNVVYKRKDGNFGLIEPEFD 180
[162][TOP]
>UniRef100_C5QQC2 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus
epidermidis M23864:W1 RepID=C5QQC2_STAEP
Length = 191
Score = 85.5 bits (210), Expect = 3e-15
Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K +RAEE + +YA IDL++ ++R++RK K + NR E V
Sbjct: 61 KDVTLRAEERHDDLYAGIDLITNKLERQVRKYKTR----------VNRKHRDRGDQEVFV 110
Query: 449 EDVEDSTDSSV-GEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEET 273
+V+++T V G EE ++D EI+R+K F + P+ EAV Q+ L+ HDF+ F + ET
Sbjct: 111 AEVQEATPEEVSGAEEPDNDSDIEIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRET 170
Query: 272 GEINIVYKRKEGGYGLI 222
+IVY+RK+G YGLI
Sbjct: 171 DGTSIVYRRKDGKYGLI 187
[163][TOP]
>UniRef100_C2SSP0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus BDRD-ST196
RepID=C2SSP0_BACCE
Length = 180
Score = 85.5 bits (210), Expect = 3e-15
Identities = 56/136 (41%), Positives = 79/136 (58%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE +YA IDLV I+R++RK K K + R KG V+ I P V
Sbjct: 60 LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KG----SVKTNFILPEAVAV 114
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
D+ EED+L E+VRTK F++ P+ V EA+ Q++++ H F+ F N +T E N
Sbjct: 115 LDAV--------EEDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHSFFVFTNADTNETN 164
Query: 260 IVYKRKEGGYGLIIPK 213
+VY RK+G YGLI K
Sbjct: 165 VVYGRKDGKYGLIETK 180
[164][TOP]
>UniRef100_A5Z528 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum
ATCC 27560 RepID=A5Z528_9FIRM
Length = 179
Score = 85.5 bits (210), Expect = 3e-15
Identities = 52/141 (36%), Positives = 78/141 (55%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++RAEE ++ +Y ID+V I+R+L K K K D + ++E E +
Sbjct: 57 KGRIIRAEEISDDMYVSIDMVEETIERQLVKYKNKIID--------KKKSIKEAFTETYI 108
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
E E+E++D IK I +TK F + P+ EA ++EL+ H+F+ F N ET
Sbjct: 109 E---------ADYEDEDEDQIK-IKKTKRFGIKPMDPEEACVEMELLGHNFFVFLNAETE 158
Query: 269 EINIVYKRKEGGYGLIIPKKD 207
E+N+VYKRK YGLI P+ D
Sbjct: 159 EVNVVYKRKGNTYGLIEPELD 179
[165][TOP]
>UniRef100_P47995 Uncharacterized protein Sca_0400 n=1 Tax=Staphylococcus carnosus
subsp. carnosus TM300 RepID=Y400_STACT
Length = 188
Score = 85.5 bits (210), Expect = 3e-15
Identities = 51/132 (38%), Positives = 80/132 (60%)
Frame = -3
Query: 617 VRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDVE 438
+RAEE + +YA IDL++ ++R++RK K + NR K +E EP E
Sbjct: 65 LRAEERNDDLYAGIDLITNKLERQVRKYKTR----------VNRKKRKESEHEPFPATPE 114
Query: 437 DSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEINI 258
+++V + ++DD I EI+R+K F + P+ EAV Q++L+ HDF+ F + ET +I
Sbjct: 115 TPPETAV--DHDKDDEI-EIIRSKQFSLKPMDSEEAVLQMDLLGHDFFIFNDRETDGTSI 171
Query: 257 VYKRKEGGYGLI 222
VY+RK+G YGLI
Sbjct: 172 VYRRKDGKYGLI 183
[166][TOP]
>UniRef100_A0Q2Y0 Ribosomal subunit interface protein n=1 Tax=Clostridium novyi NT
RepID=A0Q2Y0_CLONN
Length = 178
Score = 85.1 bits (209), Expect = 5e-15
Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEK--DSDHGRHMKGFNRLKVREPVIEPVVE 447
++RAE+ +YA ID+V ++R++RK K K HG +K F + P
Sbjct: 60 ILRAEDSNSDMYAAIDIVLEKLERQIRKQKTKLQRRKHGDALK-FQFIPEYVP------- 111
Query: 446 DVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
+++ED++ +IV+TK F + P++ EAV Q+EL+ H+F+ F N ET E
Sbjct: 112 ------------KDDEDNIESKIVKTKRFAIKPMSREEAVLQMELLGHNFFVFTNAETEE 159
Query: 266 INIVYKRKEGGYGLIIPK 213
+N++YKRK+G YGLI P+
Sbjct: 160 VNVLYKRKDGQYGLIEPE 177
[167][TOP]
>UniRef100_A9VQA3 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Bacillus cereus group RepID=A9VQA3_BACWK
Length = 180
Score = 85.1 bits (209), Expect = 5e-15
Identities = 54/136 (39%), Positives = 78/136 (57%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE +YA IDLV I+R++RK K K + R KG + P V++ V
Sbjct: 60 LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNFILPEAVAVLDAV 118
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E ED+L E+VRTK F++ P+ V EA+ Q++++ H F+ F N +T E N
Sbjct: 119 E------------EDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHSFFVFTNADTNETN 164
Query: 260 IVYKRKEGGYGLIIPK 213
+VY RK+G YGLI K
Sbjct: 165 VVYGRKDGKYGLIETK 180
[168][TOP]
>UniRef100_C2ZFA1 Ribosome-associated factor Y n=2 Tax=Bacillus cereus
RepID=C2ZFA1_BACCE
Length = 180
Score = 85.1 bits (209), Expect = 5e-15
Identities = 55/136 (40%), Positives = 80/136 (58%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE +YA IDLV ++R++RK K K + R KG V+ I P V
Sbjct: 60 LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KG----SVKTNFILPEAVAV 114
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
D+ EED+L E+VRTK F++ P+ V EA+ Q++++ H+F+ F N +T E N
Sbjct: 115 LDAV--------EEDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETN 164
Query: 260 IVYKRKEGGYGLIIPK 213
+VY RK+G YGLI K
Sbjct: 165 VVYGRKDGKYGLIETK 180
[169][TOP]
>UniRef100_C2YZ14 Ribosome-associated factor Y n=1 Tax=Bacillus cereus AH1271
RepID=C2YZ14_BACCE
Length = 180
Score = 85.1 bits (209), Expect = 5e-15
Identities = 55/136 (40%), Positives = 80/136 (58%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE +YA IDLV ++R++RK K K + R KG V+ I P V
Sbjct: 60 LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KG----SVKTNFILPEAVAV 114
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
D+ EED+L E+VRTK F++ P+ V EA+ Q++++ H+F+ F N +T E N
Sbjct: 115 LDAV--------EEDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETN 164
Query: 260 IVYKRKEGGYGLIIPK 213
+VY RK+G YGLI K
Sbjct: 165 VVYGRKDGKYGLIETK 180
[170][TOP]
>UniRef100_C2Q3D0 Ribosome-associated factor Y n=2 Tax=Bacillus cereus
RepID=C2Q3D0_BACCE
Length = 180
Score = 85.1 bits (209), Expect = 5e-15
Identities = 55/136 (40%), Positives = 79/136 (58%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE +YA IDLV I+R++RK K K + R KG ++ I P V
Sbjct: 60 LLRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KG----SIKTNFILPEAVAV 114
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
D+ EED+L E+VRTK F++ P+ V EA+ Q++++ H F+ F N +T E N
Sbjct: 115 LDAV--------EEDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHSFFVFTNADTNETN 164
Query: 260 IVYKRKEGGYGLIIPK 213
+VY RK+G YGLI K
Sbjct: 165 VVYGRKDGKYGLIETK 180
[171][TOP]
>UniRef100_C2LVK8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus hominis
SK119 RepID=C2LVK8_STAHO
Length = 191
Score = 85.1 bits (209), Expect = 5e-15
Identities = 57/144 (39%), Positives = 86/144 (59%), Gaps = 8/144 (5%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIK----EKDSDHGRHMKGFNRLKVREPVI 462
K+ +RAEE + +YA IDLV++ ++R++RK K K+ D+G EP I
Sbjct: 61 KNVTLRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKNRDNGEP----------EPFI 110
Query: 461 EP----VVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFY 294
V EDVE +++SS E+++ EI+R+K F + P+ EAV Q++L+ HDFY
Sbjct: 111 AEQQTVVNEDVEATSESS-----NENEI--EIIRSKQFSLKPMDSEEAVLQMDLLGHDFY 163
Query: 293 GFQNEETGEINIVYKRKEGGYGLI 222
F + ET +IVY+RK+G YGLI
Sbjct: 164 IFTDRETDGTSIVYRRKDGKYGLI 187
[172][TOP]
>UniRef100_A6CQE4 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. SG-1
RepID=A6CQE4_9BACI
Length = 189
Score = 85.1 bits (209), Expect = 5e-15
Identities = 51/135 (37%), Positives = 73/135 (54%)
Frame = -3
Query: 626 HGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVE 447
H V+RAEE E +YA IDL+ ++R++RK K K NR + +
Sbjct: 62 HLVLRAEERHEDMYAAIDLIVDKLERQIRKHKTK----------VNRKMREKGSPKEFFA 111
Query: 446 DVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
E T S + E+ E + E+VRTK F + P+ EA+ Q+ L+ H F+ F + ET
Sbjct: 112 AQEGLTTSQLNEKARETEENDEVVRTKQFNLKPMDSEEAILQMNLLGHSFFIFTDAETNA 171
Query: 266 INIVYKRKEGGYGLI 222
NIVYKR++G YGLI
Sbjct: 172 TNIVYKRRDGKYGLI 186
[173][TOP]
>UniRef100_UPI0001794B34 hypothetical protein CLOSPO_00786 n=1 Tax=Clostridium sporogenes
ATCC 15579 RepID=UPI0001794B34
Length = 175
Score = 84.7 bits (208), Expect = 6e-15
Identities = 52/139 (37%), Positives = 79/139 (56%), Gaps = 1/139 (0%)
Frame = -3
Query: 626 HGVV-RAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
HGV+ R EE E +YA ID+V ++R++RK K K + + +R I
Sbjct: 57 HGVILRGEETTEDMYASIDMVIDKLERQIRKQKTK------LQRNIHDGSLRFQYIP--- 107
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
D GE +E +IV+TK F M P++ EAV Q+EL+ H+F+ +QN +T
Sbjct: 108 -------DYESGENKET-----QIVKTKKFAMKPMSSEEAVLQMELLGHNFFVYQNADTE 155
Query: 269 EINIVYKRKEGGYGLIIPK 213
E+N++Y+RK+G YGLI P+
Sbjct: 156 EVNVIYRRKDGNYGLIEPE 174
[174][TOP]
>UniRef100_Q898W3 SSU ribosomal protein S30P n=1 Tax=Clostridium tetani
RepID=Q898W3_CLOTE
Length = 176
Score = 84.7 bits (208), Expect = 6e-15
Identities = 51/136 (37%), Positives = 82/136 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++R EE E +YA IDLV ++R++RK K K + M G + + + D
Sbjct: 60 ILRGEEANEDMYASIDLVIDKLERQIRKQKTKLQ---KRMHG-------DSLRFQFIPDY 109
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E G++ +E+ +IV+TK F + P++ EAV Q+EL+ H+F+ F++ +TGE+N
Sbjct: 110 E-------GDKFKEES---KIVKTKRFAIKPMSSEEAVLQMELIGHNFFVFESADTGEVN 159
Query: 260 IVYKRKEGGYGLIIPK 213
+VYKRK+G YGLI P+
Sbjct: 160 VVYKRKDGNYGLIEPE 175
[175][TOP]
>UniRef100_A9AY42 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Herpetosiphon aurantiacus ATCC 23779
RepID=A9AY42_HERA2
Length = 186
Score = 84.7 bits (208), Expect = 6e-15
Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
Frame = -3
Query: 626 HGVV-RAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
HG++ RAEE +YA ++ V +QR++R+ KEK + +G R E + P+
Sbjct: 63 HGIILRAEERDRELYAAVEAVHDNLQRQIRRFKEK-----HYRRGKLRRTAGEIIAAPLP 117
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
ED+ E+ EE ++I+R K + P+ EA+EQ+EL+ H F+ F++ ET
Sbjct: 118 ALPEDA------EQAEE----RQIIRAKEVTLRPMFSDEAIEQMELLGHSFFVFRDAETE 167
Query: 269 EINIVYKRKEGGYGLIIPK 213
+I +VY+R +G YGLI+P+
Sbjct: 168 KIQVVYRRNDGNYGLIMPR 186
[176][TOP]
>UniRef100_C4CGR1 SSU ribosomal protein S30P n=1 Tax=Sphaerobacter thermophilus DSM
20745 RepID=C4CGR1_9CHLR
Length = 194
Score = 84.7 bits (208), Expect = 6e-15
Identities = 45/139 (32%), Positives = 80/139 (57%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++R EE ++ IDL ++R++R+ ++K + R + ++ EP+
Sbjct: 62 KDAILRTEEKNRDIHVAIDLAIERMERQIRRFRDKRVFYRRRQR-----QMAAEAGEPLP 116
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
D D + EEE +L+ VR K F++ P++ EA+EQ+EL+ HDF+ F N +
Sbjct: 117 VSTLDGLDVAEEEEETPSELL---VRRKRFKIQPMSEEEAIEQMELLGHDFFVFFNPDLA 173
Query: 269 EINIVYKRKEGGYGLIIPK 213
EIN++Y+R++G YG+I P+
Sbjct: 174 EINVLYRRRDGLYGVIQPE 192
[177][TOP]
>UniRef100_C3GRH2 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1 RepID=C3GRH2_BACTU
Length = 180
Score = 84.7 bits (208), Expect = 6e-15
Identities = 53/136 (38%), Positives = 79/136 (58%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE +YA IDLV ++R++RK K K + R KG + P V++ V
Sbjct: 60 LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNFILPEAVAVLDAV 118
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E ED+L E+VRTK F++ P+ V EA+ Q++++ H+F+ F N +T E N
Sbjct: 119 E------------EDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETN 164
Query: 260 IVYKRKEGGYGLIIPK 213
+VY RK+G YGLI K
Sbjct: 165 VVYGRKDGKYGLIETK 180
[178][TOP]
>UniRef100_B1B8N8 Ribosomal subunit interface protein n=1 Tax=Clostridium botulinum C
str. Eklund RepID=B1B8N8_CLOBO
Length = 184
Score = 84.7 bits (208), Expect = 6e-15
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 2/138 (1%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEK--DSDHGRHMKGFNRLKVREPVIEPVVE 447
++RAE+ +YA ID+V ++R++RK K K HG +K + + E V +
Sbjct: 66 ILRAEDSNSDMYAAIDIVLEKLERQIRKQKTKLQRRKHGDALKF-------QFIPEYVPK 118
Query: 446 DVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
D EDS +S +IV+TK F + P++ EAV Q+EL+ H+F+ F N +T E
Sbjct: 119 DNEDSIES-------------KIVKTKRFAIKPMSKEEAVLQMELLGHNFFVFTNGDTEE 165
Query: 266 INIVYKRKEGGYGLIIPK 213
+N++YKRK+G YGLI P+
Sbjct: 166 VNVLYKRKDGQYGLIEPE 183
[179][TOP]
>UniRef100_A0RKX8 Sigma 54 modulation protein / SSU ribosomal protein S30P n=26
Tax=Bacillus cereus group RepID=A0RKX8_BACAH
Length = 180
Score = 84.7 bits (208), Expect = 6e-15
Identities = 53/136 (38%), Positives = 79/136 (58%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE +YA IDLV ++R++RK K K + R KG + P V++ V
Sbjct: 60 LLRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNFILPEAVAVLDAV 118
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E ED+L E+VRTK F++ P+ V EA+ Q++++ H+F+ F N +T E N
Sbjct: 119 E------------EDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETN 164
Query: 260 IVYKRKEGGYGLIIPK 213
+VY RK+G YGLI K
Sbjct: 165 VVYGRKDGKYGLIETK 180
[180][TOP]
>UniRef100_A7B7M8 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
29149 RepID=A7B7M8_RUMGN
Length = 185
Score = 84.7 bits (208), Expect = 6e-15
Identities = 53/143 (37%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEK----DSDHGRHMKGFNRLKVREPVI 462
K ++R+E+ ++ +Y +DLV +I+R+LRK K K H N K
Sbjct: 57 KGNIIRSEQTSDDMYVSVDLVEEVIERQLRKYKNKLVARSQGHPTASGSGNNFKK----- 111
Query: 461 EPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQN 282
E E D+SV DD I+ IVRTK F + P+ +A Q++L+ H F+ F N
Sbjct: 112 ----EFFESEDDTSV------DDEIR-IVRTKRFGIKPMYPEDACIQMDLLGHAFFVFCN 160
Query: 281 EETGEINIVYKRKEGGYGLIIPK 213
ET E+N+VYKRK+G +GLI P+
Sbjct: 161 AETDEVNVVYKRKDGSFGLIEPE 183
[181][TOP]
>UniRef100_B9EAE7 Ribosomal subunit interface protein homolog n=1 Tax=Macrococcus
caseolyticus JCSC5402 RepID=B9EAE7_MACCJ
Length = 186
Score = 84.3 bits (207), Expect = 8e-15
Identities = 53/136 (38%), Positives = 79/136 (58%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K +RAEE +YA ++L+ ++R++RK K K NR K RE ++ +
Sbjct: 61 KDVTLRAEERHNDLYAAVNLIVEKLERQIRKHKTK----------VNR-KFREKGVKNDI 109
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
V T+ EEE+ D++ EI+R+K F + P+ EAV Q+ ++ HDF+ F + ET
Sbjct: 110 FPVLPGTEP---EEEKGDEI--EIIRSKQFALKPMDAEEAVLQMNMLGHDFFIFNDRETN 164
Query: 269 EINIVYKRKEGGYGLI 222
E NIVYKRK+G YGLI
Sbjct: 165 ETNIVYKRKDGKYGLI 180
[182][TOP]
>UniRef100_B1YLH2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Exiguobacterium sibiricum 255-15 RepID=B1YLH2_EXIS2
Length = 187
Score = 84.3 bits (207), Expect = 8e-15
Identities = 50/136 (36%), Positives = 78/136 (57%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAE+ +YA IDLV ++R++RK K K + GR G I + +
Sbjct: 63 LLRAEDVNGDMYAAIDLVVDKLERQIRKHKTKINRRGRAKDGG---------IGEYFKTL 113
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E + EE+E +L E+VRTK F + P+ EA+ Q++++ H F+ F + ETG N
Sbjct: 114 EGPEAEAPVYEEDEAEL--ELVRTKRFTLKPMDTEEAILQMDMLGHTFFVFSDAETGNTN 171
Query: 260 IVYKRKEGGYGLIIPK 213
+VY+RK+G YGLI P+
Sbjct: 172 VVYRRKDGRYGLIEPE 187
[183][TOP]
>UniRef100_A5G5S5 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Geobacter uraniireducens Rf4 RepID=A5G5S5_GEOUR
Length = 181
Score = 84.3 bits (207), Expect = 8e-15
Identities = 48/143 (33%), Positives = 78/143 (54%)
Frame = -3
Query: 635 TKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEP 456
T K ++A E+ +YA +D V I+R+LR+ KE R+K +P +
Sbjct: 55 TAKGITMKASEETNDMYAAVDAVVDKIERQLRRYKE-------------RIKAHKPATDT 101
Query: 455 VVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEE 276
V+ S + E++ + +I +RTKTF + P++V EAV Q++L+ DF +
Sbjct: 102 RERLVQKSIVEAESIEQQREPVI---IRTKTFSLKPMSVEEAVMQMDLLHKDFLVYTEAA 158
Query: 275 TGEINIVYKRKEGGYGLIIPKKD 207
T IN++Y+RK+G YGLI P K+
Sbjct: 159 TENINVIYRRKDGNYGLIEPNKE 181
[184][TOP]
>UniRef100_C8WT44 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446 RepID=C8WT44_ALIAC
Length = 180
Score = 84.3 bits (207), Expect = 8e-15
Identities = 51/136 (37%), Positives = 77/136 (56%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
+ RAEE + +YA IDL + ++ ++ + KEK + R + R P P ++
Sbjct: 62 IFRAEEKSPDMYASIDLATDKLEEQIHRYKEKLN---------RRFRARGP--RPQLKAA 110
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ + E DD IK +VR K F + P+ V EAV Q+EL+ HDF+ F N ET E+N
Sbjct: 111 DRDAVA------ETDDEIK-VVRVKRFPIKPMDVEEAVLQMELLGHDFFVFMNAETEEVN 163
Query: 260 IVYKRKEGGYGLIIPK 213
+VY+R+ G YGLI P+
Sbjct: 164 VVYRRRSGDYGLIEPQ 179
[185][TOP]
>UniRef100_C8WMZ8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Eggerthella lenta DSM 2243 RepID=C8WMZ8_9ACTN
Length = 191
Score = 84.3 bits (207), Expect = 8e-15
Identities = 49/140 (35%), Positives = 78/140 (55%)
Frame = -3
Query: 641 LFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVI 462
L TK H ++R EE E +YA ID+ + + R+LRK K K D +L+ + I
Sbjct: 60 LRTKGH-IIRVEEHEEDMYAAIDVAAAKVVRQLRKYKTKVVDR--------KLRAADETI 110
Query: 461 EPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQN 282
+ D +E DD E+VR KT E PLT EA+ +++L+ HDF+ + +
Sbjct: 111 R-IEPSAAGELDVDGLMQELSDD---EVVRVKTIEFEPLTEEEALVKIDLLGHDFFAYTD 166
Query: 281 EETGEINIVYKRKEGGYGLI 222
++G +N++Y+R +GGYGL+
Sbjct: 167 RDSGLVNVLYRRDDGGYGLL 186
[186][TOP]
>UniRef100_C6VLR5 Ribosomal protein S30EA n=3 Tax=Lactobacillus plantarum
RepID=C6VLR5_LACPJ
Length = 188
Score = 84.3 bits (207), Expect = 8e-15
Identities = 46/133 (34%), Positives = 77/133 (57%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE + +YA +DLV+ ++R++RK K K + R KG+ +
Sbjct: 64 VLRAEETSPDMYASVDLVTDKLERQIRKYKTKVNRKSRE-KGYKAIDFA----------- 111
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+TD +V + + D ++VRTK + P+ EA+ Q++++ HDF+ +++ ET IN
Sbjct: 112 --ATDETVAAADNDQDDKLDVVRTKRVALKPMDNEEAILQMDMLGHDFFIYEDAETDAIN 169
Query: 260 IVYKRKEGGYGLI 222
IVY+R +G YGLI
Sbjct: 170 IVYRRNDGRYGLI 182
[187][TOP]
>UniRef100_C0CJV5 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica
DSM 10507 RepID=C0CJV5_9FIRM
Length = 175
Score = 84.3 bits (207), Expect = 8e-15
Identities = 49/139 (35%), Positives = 77/139 (55%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++R+E+ + +Y IDLV +I+R+LRK K K D + F + + +
Sbjct: 57 KGNIIRSEQVSNDMYVSIDLVEEVIERQLRKYKTKIVDKEKAGDHFQKAFIEK------- 109
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
E EEED++ +I RTK F++ P+ +A Q+EL+ H+F+ F N ET
Sbjct: 110 ------------EYEEEDEV--KIQRTKKFDIKPMYPEDACVQMELLGHNFFVFCNAETD 155
Query: 269 EINIVYKRKEGGYGLIIPK 213
++N+VYKRK YGLI P+
Sbjct: 156 QVNVVYKRKGNTYGLIEPE 174
[188][TOP]
>UniRef100_B7DUH5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Alicyclobacillus acidocaldarius LAA1
RepID=B7DUH5_9BACL
Length = 180
Score = 84.3 bits (207), Expect = 8e-15
Identities = 51/136 (37%), Positives = 77/136 (56%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
+ RAEE + +YA IDL + ++ ++ + KEK + R + R P P ++
Sbjct: 62 IFRAEEKSPDMYASIDLATDKLEEQIHRYKEKLN---------RRFRARGP--RPQLKAA 110
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ + E DD IK +VR K F + P+ V EAV Q+EL+ HDF+ F N ET E+N
Sbjct: 111 DRDAVA------ETDDEIK-VVRVKRFPIKPMDVEEAVLQMELLGHDFFVFMNAETEEVN 163
Query: 260 IVYKRKEGGYGLIIPK 213
+VY+R+ G YGLI P+
Sbjct: 164 VVYRRRSGDYGLIEPQ 179
[189][TOP]
>UniRef100_Q9RVE7 Protein DR_1082 n=1 Tax=Deinococcus radiodurans RepID=UA82_DEIRA
Length = 191
Score = 84.3 bits (207), Expect = 8e-15
Identities = 52/135 (38%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
Frame = -3
Query: 623 GVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVR-EPVIEPVVE 447
G++RAEE +YA ID S +++R+LRK K R+MK R + R EP+ P
Sbjct: 65 GIIRAEEHHADMYAAIDKASDVLERQLRKFKT------RYMK--QRQEGRPEPLPGPA-- 114
Query: 446 DVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
+ E + S ++ + EIVR K FE+ P++ +AV Q+E + HDFY FQ+ + G+
Sbjct: 115 EAEVNAQGSGAAMDDVSEFHPEIVRQKRFELRPMSAEDAVVQMEALGHDFYVFQDLQ-GQ 173
Query: 266 INIVYKRKEGGYGLI 222
+VY+R++G YGLI
Sbjct: 174 TGVVYRRRDGHYGLI 188
[190][TOP]
>UniRef100_C4ZI34 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Eubacterium rectale
ATCC 33656 RepID=C4ZI34_EUBR3
Length = 175
Score = 84.0 bits (206), Expect = 1e-14
Identities = 55/139 (39%), Positives = 75/139 (53%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K V+R+E+ + +Y IDLV +I+R+LRK + K S K P I
Sbjct: 57 KGHVIRSEQVSNDMYVSIDLVEEVIERQLRKYRTKIS-----------AKKYAPAI---- 101
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
D V ++ ED+ IK IVRTK F M P+ +A Q+EL HDF+ F+N E
Sbjct: 102 -----FQDDFVEADDAEDEEIK-IVRTKRFGMKPMYPEDACIQMELSGHDFFVFRNAEND 155
Query: 269 EINIVYKRKEGGYGLIIPK 213
E+N+VYKRK YGLI P+
Sbjct: 156 EVNVVYKRKGHTYGLIEPE 174
[191][TOP]
>UniRef100_A0ALJ5 YfiA protein n=2 Tax=Listeria RepID=A0ALJ5_LISW6
Length = 187
Score = 84.0 bits (206), Expect = 1e-14
Identities = 56/133 (42%), Positives = 72/133 (54%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE + +YA IDL+ ++R++RK K K + R KG R DV
Sbjct: 64 VLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRD-KGAERDYF-------AYSDV 115
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
ST EE E D EIVRTK F + P+ EAV Q+ L+ H FY + + ET N
Sbjct: 116 NGSTPP----EENESDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVYTDAETNGTN 171
Query: 260 IVYKRKEGGYGLI 222
IVY RK+G YGLI
Sbjct: 172 IVYSRKDGKYGLI 184
[192][TOP]
>UniRef100_B9MLV8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Anaerocellum thermophilum DSM 6725
RepID=B9MLV8_ANATD
Length = 181
Score = 83.6 bits (205), Expect = 1e-14
Identities = 45/139 (32%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
Frame = -3
Query: 626 HGVV-RAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
HG++ RAEE + +Y+ IDLV ++R++RK K K + + + + +
Sbjct: 57 HGMILRAEERSNDMYSAIDLVVDTLERQIRKFKTKIAKRAKDAESLRYMTFE-------L 109
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
E+ E +E +E++ I +TK F + P++V EA+ Q+ L+ H+F+ F N++T
Sbjct: 110 EEPE--------KEVQEENSEFRIAKTKRFPIKPMSVEEAILQMNLLGHNFFVFLNQDTD 161
Query: 269 EINIVYKRKEGGYGLIIPK 213
++N+VY+R +G YGLI P+
Sbjct: 162 KVNVVYRRNDGAYGLIEPE 180
[193][TOP]
>UniRef100_B2A816 Sigma 54 modulation protein, SSU ribosomal protein S30P n=1
Tax=Natranaerobius thermophilus JW/NM-WN-LF
RepID=B2A816_NATTJ
Length = 178
Score = 83.6 bits (205), Expect = 1e-14
Identities = 51/136 (37%), Positives = 76/136 (55%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
+VR E+ +YA +D V ++R+++K K K NR K+R+ + E
Sbjct: 63 LVRGEQSTGDMYASVDQVIDKVERQIKKHKTK----------INR-KLRQSGGSLLKE-- 109
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
G E E+ EIV+TK F + P+T EAV Q+EL+ HDF+ F+N ET E+N
Sbjct: 110 --------GAESTEEGKDPEIVKTKRFAIKPMTPEEAVLQMELIGHDFFVFRNAETEEVN 161
Query: 260 IVYKRKEGGYGLIIPK 213
+VY+RK+G YG I P+
Sbjct: 162 VVYRRKDGNYGQIEPE 177
[194][TOP]
>UniRef100_A4XJ41 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Caldicellulosiruptor saccharolyticus DSM 8903
RepID=A4XJ41_CALS8
Length = 182
Score = 83.6 bits (205), Expect = 1e-14
Identities = 43/136 (31%), Positives = 76/136 (55%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE + +Y+ IDLV ++R++RK K K + + + + E +
Sbjct: 61 ILRAEEASNDMYSAIDLVVDSLERQIRKFKTKIAKRAKDAESLRYMTFEEEAQQ------ 114
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E +E++ +I +TK F + P++V EA+ Q+ L+ H F+ F N++T ++N
Sbjct: 115 ---------ETNQEENGEFKIAKTKRFPIKPMSVDEAILQMNLLGHSFFVFLNQDTDKVN 165
Query: 260 IVYKRKEGGYGLIIPK 213
+VYKR +G YGLI P+
Sbjct: 166 VVYKRNDGAYGLIEPE 181
[195][TOP]
>UniRef100_C8NDQ1 Ribosomal subunit interface protein n=1 Tax=Granulicatella adiacens
ATCC 49175 RepID=C8NDQ1_9LACT
Length = 186
Score = 83.6 bits (205), Expect = 1e-14
Identities = 53/133 (39%), Positives = 78/133 (58%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE + +Y IDLV ++R++RK K K + R KGF+ ++ P + +
Sbjct: 70 VLRAEETSIDLYGSIDLVVDKLERQVRKHKTKINRKSRE-KGFD-------IVLPTLPEA 121
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
EEEE L EIVRTK ++ P+ EAV Q+ ++ H+F+ +Q+ ET E N
Sbjct: 122 P---------EEEETGL--EIVRTKRIDLKPMDSEEAVLQMNMLGHNFFIYQDAETNETN 170
Query: 260 IVYKRKEGGYGLI 222
IVY+RK+G YGLI
Sbjct: 171 IVYRRKDGKYGLI 183
[196][TOP]
>UniRef100_Q71WR7 Ribosomal subunit interface protein n=9 Tax=Listeria
RepID=Q71WR7_LISMF
Length = 187
Score = 83.6 bits (205), Expect = 1e-14
Identities = 56/133 (42%), Positives = 72/133 (54%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE + +YA IDL+ ++R++RK K K + R KG R DV
Sbjct: 64 VLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRD-KGAERDYF-------AYSDV 115
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
ST EE E D EIVRTK F + P+ EAV Q+ L+ H FY + + ET N
Sbjct: 116 NGSTPP----EENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVYTDAETNGTN 171
Query: 260 IVYKRKEGGYGLI 222
IVY RK+G YGLI
Sbjct: 172 IVYSRKDGKYGLI 184
[197][TOP]
>UniRef100_C6JE61 Putative uncharacterized protein n=1 Tax=Ruminococcus sp.
5_1_39BFAA RepID=C6JE61_9FIRM
Length = 175
Score = 83.6 bits (205), Expect = 1e-14
Identities = 47/139 (33%), Positives = 77/139 (55%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++R+E+ + +Y IDLV +I+R+LRK K K D + F +
Sbjct: 57 KGNIIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKIVDKQQAAANFQK------------ 104
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
+ + ++ +ED+ +K I+RTK F + P+ +A Q+EL+ H+F+ F N ET
Sbjct: 105 --------AYLDKDYDEDEEVK-IIRTKKFGIKPMYPEDACVQMELLGHNFFVFYNAETE 155
Query: 269 EINIVYKRKEGGYGLIIPK 213
++N+VYKRK YGLI P+
Sbjct: 156 QVNVVYKRKGNTYGLIEPE 174
[198][TOP]
>UniRef100_C2HCP0 Ribosome-associated inhibitor protein Y n=4 Tax=Enterococcus
faecium RepID=C2HCP0_ENTFC
Length = 183
Score = 83.6 bits (205), Expect = 1e-14
Identities = 52/136 (38%), Positives = 77/136 (56%), Gaps = 3/136 (2%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE + +YA IDLV ++R++RK K K + R G N
Sbjct: 64 VLRAEETSPDLYASIDLVVDKLERQIRKFKTKINRKSRET-GMN---------------- 106
Query: 440 EDSTDSSV---GEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
+ D++V GEEE E+D +IVRTK + P+ EAV Q+ ++ H+F+ F++ ET
Sbjct: 107 --TADAAVLFNGEEENENDSELDIVRTKRLSLKPMDSEEAVLQMNMLGHNFFIFEDAETN 164
Query: 269 EINIVYKRKEGGYGLI 222
+IVY+RK+G YGLI
Sbjct: 165 GTSIVYRRKDGKYGLI 180
[199][TOP]
>UniRef100_C1P990 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Bacillus coagulans 36D1 RepID=C1P990_BACCO
Length = 187
Score = 83.6 bits (205), Expect = 1e-14
Identities = 53/138 (38%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE E +YA IDL++ ++R++RK K K NR K+RE + ++
Sbjct: 64 VLRAEETNEDMYAAIDLIADKLERQIRKHKTK----------VNR-KLRE---KGSTREL 109
Query: 440 EDSTDSSVGEEE--EEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
+ D+ + E++ +E+D +IVRTK F + P+ EAV Q+ L+ H+F+ + + ET
Sbjct: 110 FTTPDTGLKEKQARKEEDSELQIVRTKHFNLKPMDSEEAVLQMNLLGHNFFIYTDAETNH 169
Query: 266 INIVYKRKEGGYGLIIPK 213
NIVY+RK+G YGLI K
Sbjct: 170 TNIVYRRKDGKYGLIETK 187
[200][TOP]
>UniRef100_A7VDW4 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50
RepID=A7VDW4_9CLOT
Length = 170
Score = 83.6 bits (205), Expect = 1e-14
Identities = 51/139 (36%), Positives = 78/139 (56%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++RAE+ ++ +Y IDLV +I+R++ + K+K D ++
Sbjct: 52 KGHIIRAEQVSDDMYVSIDLVLEVIERQVNRHKKKLIDKEQNAAYLQ------------- 98
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
+S V EE +EDD IK IVR K F + P+ +A Q++L+ H+FY F+N ET
Sbjct: 99 -------NSFVEEETDEDDEIK-IVRCKKFAVKPMYPEDACIQMDLLGHNFYVFRNAETE 150
Query: 269 EINIVYKRKEGGYGLIIPK 213
E+N+VYKRK YGLI P+
Sbjct: 151 EVNVVYKRKGNTYGLIEPE 169
[201][TOP]
>UniRef100_A5ZRI8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC
29174 RepID=A5ZRI8_9FIRM
Length = 175
Score = 83.6 bits (205), Expect = 1e-14
Identities = 48/139 (34%), Positives = 76/139 (54%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++R+E+ + +Y IDLV +I+R+LRK K K D + F +
Sbjct: 57 KGNIIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKIVDKQQAAANFQK------------ 104
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
+ ++ EED+ +K I+RTK F + P+ +A Q+EL+ H+F+ F N ET
Sbjct: 105 --------EYLDKDYEEDEEVK-IIRTKKFGIKPMYPEDACVQMELLGHNFFVFFNAETE 155
Query: 269 EINIVYKRKEGGYGLIIPK 213
++N+VYKRK YGLI P+
Sbjct: 156 QVNVVYKRKGNTYGLIEPE 174
[202][TOP]
>UniRef100_Q6NIR9 Putative uncharacterized protein n=1 Tax=Corynebacterium
diphtheriae RepID=Q6NIR9_CORDI
Length = 222
Score = 83.2 bits (204), Expect = 2e-14
Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 2/146 (1%)
Frame = -3
Query: 635 TKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDH--GRHMKGFNRLKVREPVI 462
T K + RAE ++ YA ++ ++R LRK+K + S G E V
Sbjct: 77 TGKGHIARAEAKEDSFYAALETALARMERSLRKVKARRSISLSGHRAPLGTGEAAAELVK 136
Query: 461 EPVVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQN 282
E V E+ D ++ ED + +IVRTK P++V +A+ ++ELV HDFY F N
Sbjct: 137 EAEVAREENKYDHDPYADKVEDVIPGQIVRTKEHPSTPMSVDDALSEMELVGHDFYLFVN 196
Query: 281 EETGEINIVYKRKEGGYGLIIPKKDG 204
EETG+ ++VY+R+ YGLI K+G
Sbjct: 197 EETGQPSVVYRRRAFDYGLISLAKEG 222
[203][TOP]
>UniRef100_Q5WDF7 Ribosomal protein S30EA n=1 Tax=Bacillus clausii KSM-K16
RepID=Q5WDF7_BACSK
Length = 184
Score = 83.2 bits (204), Expect = 2e-14
Identities = 48/136 (35%), Positives = 79/136 (58%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++R EE +YA ID+V ++R++RK K K + R + E +EP+ ++V
Sbjct: 63 LLRGEEINADMYAAIDIVVEKLERQIRKYKTKVNRKFRQEGSLKYMFKNE--LEPLRDEV 120
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E+D+L E+VRTK F + P+ EA+ Q++L+ H+F+ F + E+G N
Sbjct: 121 A-----------EDDEL--EVVRTKRFNLKPMDAEEAILQMDLLGHNFFVFSDAESGSTN 167
Query: 260 IVYKRKEGGYGLIIPK 213
+VY+RK+G YGLI P+
Sbjct: 168 VVYRRKDGKYGLIEPE 183
[204][TOP]
>UniRef100_C4W9L5 Ribosomal subunit interface protein n=1 Tax=Staphylococcus warneri
L37603 RepID=C4W9L5_STAWA
Length = 191
Score = 83.2 bits (204), Expect = 2e-14
Identities = 48/136 (35%), Positives = 76/136 (55%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K +RAEE + +YA +DL++ ++R++RK K + NR E V
Sbjct: 61 KDVTLRAEERHDDLYAGVDLITNKLERQVRKYKTR----------VNRKHRDRGDQEVFV 110
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
+V+++ + EE +D EI+R+K F + P+ EAV Q+ L+ HDF+ F + ET
Sbjct: 111 AEVQEAPPEEISGAEENNDNDIEIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRETD 170
Query: 269 EINIVYKRKEGGYGLI 222
+IVY+RK+G YGLI
Sbjct: 171 GTSIVYRRKDGKYGLI 186
[205][TOP]
>UniRef100_C4GCR0 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles
DSM 14600 RepID=C4GCR0_9FIRM
Length = 176
Score = 83.2 bits (204), Expect = 2e-14
Identities = 52/140 (37%), Positives = 77/140 (55%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K G+VR E+ + +Y ID S I+ +L K + K D R KG V+
Sbjct: 57 KGGIVRCEKTTDDMYVSIDAASEGIEDQLTKYRHKLVD--RAHKG--------AVLNAAF 106
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
E+ G +E+E++ IK IVRTK F++ P+ +A Q+EL+ H F+ F N ET
Sbjct: 107 EE---------GFDEDEEEEIK-IVRTKKFDLKPMYAEDACAQMELLGHSFFVFTNAETD 156
Query: 269 EINIVYKRKEGGYGLIIPKK 210
+N+VY+RK G YGLI P++
Sbjct: 157 AVNVVYRRKNGSYGLIEPEE 176
[206][TOP]
>UniRef100_C2ETD9 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
vaginalis ATCC 49540 RepID=C2ETD9_9LACO
Length = 189
Score = 83.2 bits (204), Expect = 2e-14
Identities = 51/132 (38%), Positives = 76/132 (57%)
Frame = -3
Query: 617 VRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDVE 438
+RAEE + +Y +DLV+ ++R++RK K K + R KGF L+ P +D E
Sbjct: 74 LRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGFKSLE-----FVPTDDDAE 127
Query: 437 DSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEINI 258
+DDL +IVRTK + P+ EAV Q++++ HDF+ FQ+ ET +I
Sbjct: 128 S-----------QDDL--KIVRTKQISLKPMDPEEAVLQMDMLGHDFFVFQDAETDGTSI 174
Query: 257 VYKRKEGGYGLI 222
VY+RK+G YGLI
Sbjct: 175 VYRRKDGRYGLI 186
[207][TOP]
>UniRef100_B4BN91 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. G11MC16 RepID=B4BN91_9BACI
Length = 182
Score = 83.2 bits (204), Expect = 2e-14
Identities = 52/135 (38%), Positives = 77/135 (57%)
Frame = -3
Query: 626 HGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVE 447
H ++RAEE + +YA IDLV+ ++R++RK K K + +L+ RE +
Sbjct: 61 HLLLRAEERHDDMYAAIDLVTDKLERQIRKHKTKVN---------RKLRDRE-------K 104
Query: 446 DVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
V+ + G E+D EIVRTK F + P+ EA+ Q+ L+ H+F+ F N ET
Sbjct: 105 GVKLAAPVPNGAAAAENDEEFEIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNR 164
Query: 266 INIVYKRKEGGYGLI 222
NIVY+RK+G YGLI
Sbjct: 165 TNIVYRRKDGRYGLI 179
[208][TOP]
>UniRef100_A0NI00 Ribosomal subunit interface protein n=1 Tax=Oenococcus oeni ATCC
BAA-1163 RepID=A0NI00_OENOE
Length = 190
Score = 83.2 bits (204), Expect = 2e-14
Identities = 49/132 (37%), Positives = 74/132 (56%)
Frame = -3
Query: 617 VRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDVE 438
+RAEE Y +DLVS + R++RK K + + R +GF + E I+PV D
Sbjct: 65 LRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGIDFNE-AIDPVPSDTN 122
Query: 437 DSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEINI 258
ED I +++R KT + P+ + EAV Q+E++ HDF+ F N +T +++I
Sbjct: 123 ------------EDKKI-DVIRRKTLSLKPMDIEEAVLQMEMLDHDFFLFLNSDTNQLDI 169
Query: 257 VYKRKEGGYGLI 222
VYKR +G YGLI
Sbjct: 170 VYKRDDGKYGLI 181
[209][TOP]
>UniRef100_C9XIR4 Putative RNA-binding protein n=3 Tax=Clostridium difficile
RepID=C9XIR4_CLODI
Length = 183
Score = 82.8 bits (203), Expect = 2e-14
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAE+ E +Y ID+V + ++L+K K++ D + K
Sbjct: 61 IIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKSIR---------------F 105
Query: 440 EDSTDSSVGEEEEEDDLIKEIV--RTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
+DS + E+E+ D +E+V R K F + P++ EAV Q+EL+ HDFY F+N ++ E
Sbjct: 106 QDSEINLADEQEDYGDENQELVIQRRKKFSVKPMSEEEAVLQMELIGHDFYMFKNIDSDE 165
Query: 266 INIVYKRKEGGYGLI 222
I +VYKR GGYG+I
Sbjct: 166 IAVVYKRNNGGYGII 180
[210][TOP]
>UniRef100_A4J928 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Desulfotomaculum reducens MI-1 RepID=A4J928_DESRM
Length = 173
Score = 82.8 bits (203), Expect = 2e-14
Identities = 47/136 (34%), Positives = 76/136 (55%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++R EE E +Y+ +D V ++R++ + K K + R +G L V VVED+
Sbjct: 60 ILRGEEATEEMYSAVDNVVEKMERQIERYKGKINR--RDNRGIADLGV-------VVEDM 110
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
ED T ++++TK F + P+ + EA+ Q+ L+ HDF+ F N ET + N
Sbjct: 111 EDETP--------------QVIKTKRFAIKPMALDEAIMQMNLLGHDFFVFSNAETEQTN 156
Query: 260 IVYKRKEGGYGLIIPK 213
++YKRK+G YGLI P+
Sbjct: 157 VIYKRKDGNYGLIEPE 172
[211][TOP]
>UniRef100_A4ISU0 Ribosomal subunit interface protein n=1 Tax=Geobacillus
thermodenitrificans NG80-2 RepID=A4ISU0_GEOTN
Length = 182
Score = 82.8 bits (203), Expect = 2e-14
Identities = 52/135 (38%), Positives = 77/135 (57%)
Frame = -3
Query: 626 HGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVE 447
H ++RAEE + +YA IDLV+ ++R++RK K K + +L+ RE +
Sbjct: 61 HLLLRAEERHDDMYAAIDLVTDKLERQIRKHKTKVN---------RKLRDRE-------K 104
Query: 446 DVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
V+ + G E+D EIVRTK F + P+ EA+ Q+ L+ H+F+ F N ET
Sbjct: 105 GVKLAAPVPNGAAAVENDEEFEIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNR 164
Query: 266 INIVYKRKEGGYGLI 222
NIVY+RK+G YGLI
Sbjct: 165 TNIVYRRKDGRYGLI 179
[212][TOP]
>UniRef100_C9L411 Ribosomal subunit interface protein n=1 Tax=Blautia hansenii DSM
20583 RepID=C9L411_RUMHA
Length = 176
Score = 82.8 bits (203), Expect = 2e-14
Identities = 52/138 (37%), Positives = 74/138 (53%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++R+E+ + +Y IDLV II+R+LRK K K D + GF E V
Sbjct: 57 KGNIIRSEQVSSDMYVSIDLVEEIIERQLRKYKNKIIDK-KQSAGFQP--------EFVE 107
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
+D E+ T+ +I+RTK F P+ +A Q+EL+ H+F+ F N ET
Sbjct: 108 KDYEEDTNEI------------KIIRTKKFGFKPMYPEDACVQMELLGHNFFVFLNAETE 155
Query: 269 EINIVYKRKEGGYGLIIP 216
E+N+VYKRK YGLI P
Sbjct: 156 EVNVVYKRKGNTYGLIEP 173
[213][TOP]
>UniRef100_C6Q3Y9 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Thermoanaerobacter mathranii subsp. mathranii str.
A3 RepID=C6Q3Y9_9THEO
Length = 181
Score = 82.8 bits (203), Expect = 2e-14
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPV---IEPVV 450
+ RAEE ++ +Y ID V I+R++ K K K NR E + I PV
Sbjct: 61 IFRAEEVSDDMYGSIDRVVDKIERQILKHKTKLK---------NRFGANESIRFEIPPVY 111
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
++ + EEE++ EIV+TK F + P++ EA+ Q+ L+ H+F+ F N +T
Sbjct: 112 QEAK----------EEEEETSFEIVKTKRFPIKPMSAEEAILQMNLLGHNFFVFTNADTD 161
Query: 269 EINIVYKRKEGGYGLIIP 216
IN+VYKRK+G YGLI P
Sbjct: 162 TINVVYKRKDGKYGLIEP 179
[214][TOP]
>UniRef100_C2ECJ0 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
ruminis ATCC 25644 RepID=C2ECJ0_9LACO
Length = 186
Score = 82.8 bits (203), Expect = 2e-14
Identities = 49/133 (36%), Positives = 78/133 (58%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE + +YA IDLV+ ++R++RK K K + R KGF + P +P
Sbjct: 64 VLRAEETSPDMYASIDLVTDKLERQIRKHKTKLNRKSRE-KGFKTFEF-VPTADP----- 116
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+E +D EIVRTK+ + P+ EA+ Q++++ HDF+ +++ ET I+
Sbjct: 117 ---------KEAAAEDKKFEIVRTKSVSLKPMDAEEAILQMDMLGHDFFIYEDAETSGID 167
Query: 260 IVYKRKEGGYGLI 222
IVY+R++G YGLI
Sbjct: 168 IVYRRRDGRYGLI 180
[215][TOP]
>UniRef100_C0WCZ2 Sigma-54 modulation protein n=1 Tax=Acidaminococcus sp. D21
RepID=C0WCZ2_9FIRM
Length = 180
Score = 82.8 bits (203), Expect = 2e-14
Identities = 50/136 (36%), Positives = 80/136 (58%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RA+E +E +YA ID I+R++ K K + + +N R+ + PV DV
Sbjct: 60 VLRAQEGSENMYASIDNCVEKIERQIHKYKTR-----LMKRKYNNF--RDAAVPPVSGDV 112
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E++ S+ GE + + RTKT+ M P+ V EA+ Q+ +++HDF+ F N+ET +
Sbjct: 113 EEA--SADGEFK--------VARTKTYAMRPMNVQEAIMQMNMLNHDFFVFFNDETESMA 162
Query: 260 IVYKRKEGGYGLIIPK 213
+VY+RK G YGLI P+
Sbjct: 163 VVYRRKAGDYGLINPE 178
[216][TOP]
>UniRef100_C0FTS3 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans
DSM 16841 RepID=C0FTS3_9FIRM
Length = 176
Score = 82.8 bits (203), Expect = 2e-14
Identities = 51/139 (36%), Positives = 79/139 (56%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K +R+E+ + +Y IDLV +I+R+L+K + K L ++ V
Sbjct: 57 KGSYIRSEQVSSDMYVSIDLVEEVIERQLKKYRTK-------------LVTKQQNAAAVF 103
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
+ +D D E+ E+D+ IK I+RTK F+M P+ +A ++EL+ HDFY F N ET
Sbjct: 104 K--QDFLD----EKSEDDEEIK-IIRTKKFDMKPMYPEDACVEMELLGHDFYVFINAETE 156
Query: 269 EINIVYKRKEGGYGLIIPK 213
++N+VYKRK YGLI P+
Sbjct: 157 DVNVVYKRKGNTYGLIEPE 175
[217][TOP]
>UniRef100_Q9K6W6 Ribosomal protein S30AE family n=1 Tax=Bacillus halodurans
RepID=Q9K6W6_BACHD
Length = 187
Score = 82.4 bits (202), Expect = 3e-14
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 2/138 (1%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAEE +YA IDLV ++R++RK K K NR +E ++ + ++
Sbjct: 62 LLRAEEKHSDMYAAIDLVIEKLERQIRKHKTK----------VNRKFRQEGSLKYMFKND 111
Query: 440 EDSTDSSVGEE--EEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
+ D E EEEDDL ++VR K F + P+ EA+ Q++++ H+F+ F N +G+
Sbjct: 112 LEPMDGMREEILLEEEDDL--QVVRKKRFNLKPMDTEEAILQMDMLGHNFFVFSNAISGD 169
Query: 266 INIVYKRKEGGYGLIIPK 213
N+VY+RK+G YGLI P+
Sbjct: 170 TNVVYRRKDGKYGLIEPE 187
[218][TOP]
>UniRef100_Q97F93 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Clostridium
acetobutylicum RepID=Q97F93_CLOAB
Length = 174
Score = 82.4 bits (202), Expect = 3e-14
Identities = 49/136 (36%), Positives = 77/136 (56%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++R EE +YA ID+V ++R++RK K K R K + + + D
Sbjct: 60 ILRGEETNNDMYASIDIVGDKLERQVRKQKTK----------LERRKYSDSLKFQNIPDY 109
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+EE+E EIV+TK F + P++ EAV ++EL+ H+F+ FQN ++ E+N
Sbjct: 110 H--------KEEQEP----EIVKTKRFAIKPMSEEEAVLEMELLGHNFFVFQNGDSNEVN 157
Query: 260 IVYKRKEGGYGLIIPK 213
+VYKRK+G YGLI P+
Sbjct: 158 VVYKRKDGNYGLIEPE 173
[219][TOP]
>UniRef100_Q04BJ3 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365 RepID=Q04BJ3_LACDB
Length = 185
Score = 82.4 bits (202), Expect = 3e-14
Identities = 47/133 (35%), Positives = 74/133 (55%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE + +Y ID VS ++R++RK K + + R E VE+
Sbjct: 64 VLRAEETTDDMYRSIDFVSEKLERQIRKYKTRVNRKSR---------------EKGVEEF 108
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
D+ V EE+EE + +IVR K + P+ EA+ Q++++ HDF+ FQ+ ET +
Sbjct: 109 FIPEDAPVEEEKEEKAPMFKIVRNKRVNLKPMDPEEAILQMDMLEHDFFVFQDAETNGTS 168
Query: 260 IVYKRKEGGYGLI 222
+VY+R +G YGLI
Sbjct: 169 VVYRRNDGSYGLI 181
[220][TOP]
>UniRef100_A9BI17 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Petrotoga mobilis SJ95 RepID=A9BI17_PETMO
Length = 199
Score = 82.4 bits (202), Expect = 3e-14
Identities = 44/133 (33%), Positives = 84/133 (63%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
+++ EE + +Y ID V+ ++RK+RK+K + + R K R+++ + + P ++++
Sbjct: 66 IIKVEERSNDLYEAIDEVTDSLERKIRKLKNRLQEQSRTDKKA-RMEIEQNLQNPDIKNL 124
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
D + + E EE+ D K IVRTK F++ ++V EA+ Q++L+ H F+ F+N + I+
Sbjct: 125 -DLAEENESEIEEKPDAPK-IVRTKNFDLTLMSVEEAMLQMQLLGHSFFVFRNPDNDAIS 182
Query: 260 IVYKRKEGGYGLI 222
++Y+RK+G GLI
Sbjct: 183 VLYERKDGDLGLI 195
[221][TOP]
>UniRef100_C2JVR1 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
rhamnosus LMS2-1 RepID=C2JVR1_LACRH
Length = 226
Score = 82.4 bits (202), Expect = 3e-14
Identities = 47/132 (35%), Positives = 79/132 (59%)
Frame = -3
Query: 617 VRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDVE 438
+RAEE + +YA IDLV+ ++R++RK K K + R KGF ++ +
Sbjct: 106 LRAEETSPDLYASIDLVTDKLERQVRKFKTKINRKSRE-KGFGQIDI------------- 151
Query: 437 DSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEINI 258
DS + + E+DD +K +VRTK + P+ EA+ Q++++ H+F+ F++ +T +I
Sbjct: 152 DSNAPAEPKPAEDDDNLK-VVRTKRVSLKPMDSQEAILQMDMLGHNFFIFEDADTNGTSI 210
Query: 257 VYKRKEGGYGLI 222
VYKR++G YGLI
Sbjct: 211 VYKRRDGRYGLI 222
[222][TOP]
>UniRef100_C7TAZ8 Ribosomal subunit interface protein n=3 Tax=Lactobacillus rhamnosus
RepID=C7TAZ8_LACRG
Length = 185
Score = 82.4 bits (202), Expect = 3e-14
Identities = 47/132 (35%), Positives = 79/132 (59%)
Frame = -3
Query: 617 VRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDVE 438
+RAEE + +YA IDLV+ ++R++RK K K + R KGF ++ +
Sbjct: 65 LRAEETSPDLYASIDLVTDKLERQVRKFKTKINRKSRE-KGFGQIDI------------- 110
Query: 437 DSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEINI 258
DS + + E+DD +K +VRTK + P+ EA+ Q++++ H+F+ F++ +T +I
Sbjct: 111 DSNAPAEPKPAEDDDNLK-VVRTKRVSLKPMDSQEAILQMDMLGHNFFIFEDADTNGTSI 169
Query: 257 VYKRKEGGYGLI 222
VYKR++G YGLI
Sbjct: 170 VYKRRDGRYGLI 181
[223][TOP]
>UniRef100_A7FQJ2 Ribosomal subunit interface protein n=7 Tax=Clostridium botulinum
RepID=A7FQJ2_CLOB1
Length = 175
Score = 82.4 bits (202), Expect = 3e-14
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 3/141 (2%)
Frame = -3
Query: 626 HGVV-RAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
HGV+ R EE E +YA ID+V ++ ++RK K K +
Sbjct: 57 HGVILRGEETTEDMYASIDMVIDKLEGQVRKQKTK-----------------------LQ 93
Query: 449 EDVEDST--DSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEE 276
+ D + + + E E++ +IV+TK F M P++ EAV Q+EL+ H+F+ +QN +
Sbjct: 94 RKIHDGSLRFQYIPDYESEENKETQIVKTKKFAMKPMSSEEAVLQMELLGHNFFVYQNAD 153
Query: 275 TGEINIVYKRKEGGYGLIIPK 213
T E+N++Y+RK+G YGLI P+
Sbjct: 154 TEEVNVIYRRKDGNYGLIEPE 174
[224][TOP]
>UniRef100_A1HT12 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Thermosinus carboxydivorans Nor1 RepID=A1HT12_9FIRM
Length = 174
Score = 82.4 bits (202), Expect = 3e-14
Identities = 47/136 (34%), Positives = 74/136 (54%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++R EE +YA IDLV +++++ K K K + K+R +
Sbjct: 60 LLRGEEATTDMYASIDLVIEKLEKQIEKYKTKIAR-----------KLRAGTFK------ 102
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
TD G E +D +V+TK F + P+ V EA+ Q+ L++HDFY F N ET ++N
Sbjct: 103 ---TDLVAGNGGESEDF--RVVKTKRFPVKPMDVEEAIMQMNLINHDFYVFMNAETEQVN 157
Query: 260 IVYKRKEGGYGLIIPK 213
++Y+RK+G YGLI P+
Sbjct: 158 VIYRRKDGNYGLIEPE 173
[225][TOP]
>UniRef100_B9ND14 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9ND14_POPTR
Length = 102
Score = 82.4 bits (202), Expect = 3e-14
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 12/100 (12%)
Frame = -3
Query: 539 KIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDVEDSTDSSVGEEEEEDDLI--------- 387
KIK+K+SDHGRHMKGFN+ KVREP+ + V D + T S +++ D+L
Sbjct: 2 KIKDKESDHGRHMKGFNKFKVREPMSQVVENDAD--TVSQRKDDDNLDELFYMHLVTIHS 59
Query: 386 ---KEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEE 276
V TK F+MPP+TV EA+ +L V H FYGF++ E
Sbjct: 60 IISSNAVHTKYFDMPPVTVDEAIVRLGNVDHAFYGFRHAE 99
[226][TOP]
>UniRef100_UPI0001B5A5D6 ribosomal subunit interface protein n=1 Tax=Staphylococcus aureus
subsp. aureus str. CF-Marseille RepID=UPI0001B5A5D6
Length = 163
Score = 82.0 bits (201), Expect = 4e-14
Identities = 48/136 (35%), Positives = 79/136 (58%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K+ +RAEE + +YA IDL++ ++R++RK K + NR E V
Sbjct: 34 KNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTR----------INRKSRDRGDQEVFV 83
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
++++ ++ V + +D+ I EI+R+K F + P+ EAV Q+ L+ HDF+ F + ET
Sbjct: 84 AELQEMQETQVDNDAYDDNEI-EIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFTDRETD 142
Query: 269 EINIVYKRKEGGYGLI 222
+IVY+RK+G YGLI
Sbjct: 143 GTSIVYRRKDGKYGLI 158
[227][TOP]
>UniRef100_Q8ENI5 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis
RepID=Q8ENI5_OCEIH
Length = 185
Score = 82.0 bits (201), Expect = 4e-14
Identities = 48/135 (35%), Positives = 81/135 (60%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++R E +YA +DLV ++R++RK K K NR K R+ P
Sbjct: 62 LLRGEVQHIDLYAAVDLVVDKLERQIRKHKTK----------INR-KFRQNG-SPKHAFA 109
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
E ++ + E+EE+++ + EIVRTK F + P+ EA+ Q++++ H+F+ F N+++GE N
Sbjct: 110 EMEKEARLAEDEEDENQL-EIVRTKRFNLKPMDSEEAILQMDMLGHEFFVFTNDDSGETN 168
Query: 260 IVYKRKEGGYGLIIP 216
+VY+R++G YGLI P
Sbjct: 169 VVYRRRDGKYGLIEP 183
[228][TOP]
>UniRef100_Q39W54 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Geobacter metallireducens GS-15 RepID=Q39W54_GEOMG
Length = 181
Score = 82.0 bits (201), Expect = 4e-14
Identities = 48/142 (33%), Positives = 81/142 (57%)
Frame = -3
Query: 635 TKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEP 456
T K ++A E+ +YA ID V I+R+LR+ KE RLK +P ++
Sbjct: 55 TAKGVTIKAAEETNDMYAAIDAVVDKIERQLRRYKE-------------RLKNHKPAVDN 101
Query: 455 VVEDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEE 276
+V+ + ++ +++++ +I VR+KT + P++V EAV Q++L+ DF F +
Sbjct: 102 RALEVQKTILTAESIDQQQEPVI---VRSKTITIKPMSVEEAVMQMDLLHKDFLVFTDST 158
Query: 275 TGEINIVYKRKEGGYGLIIPKK 210
T IN+VY+RK+G YGLI P +
Sbjct: 159 TEVINVVYRRKDGNYGLIEPSR 180
[229][TOP]
>UniRef100_C1FQQ9 Ribosomal subunit interface protein n=2 Tax=Clostridium botulinum
RepID=C1FQQ9_CLOBJ
Length = 175
Score = 82.0 bits (201), Expect = 4e-14
Identities = 50/139 (35%), Positives = 79/139 (56%), Gaps = 1/139 (0%)
Frame = -3
Query: 626 HGVV-RAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
HGV+ R EE E +YA ID+V ++ ++RK K K + K+ + +
Sbjct: 57 HGVILRGEETTEDMYASIDMVIDKLEGQVRKQKTK-----------LQRKIHDGSLR--- 102
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
+ D GE +E +IV+TK F M P++ EAV Q+EL+ H+F+ +QN +T
Sbjct: 103 --FQYIPDYESGENKET-----QIVKTKKFAMKPMSSEEAVLQMELLGHNFFVYQNADTE 155
Query: 269 EINIVYKRKEGGYGLIIPK 213
E+N++Y+RK+G YGLI P+
Sbjct: 156 EVNVIYRRKDGNYGLIEPE 174
[230][TOP]
>UniRef100_Q2YSH7 Uncharacterized protein SAB0704 n=35 Tax=Staphylococcus aureus
RepID=Y704_STAAB
Length = 190
Score = 82.0 bits (201), Expect = 4e-14
Identities = 48/136 (35%), Positives = 79/136 (58%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K+ +RAEE + +YA IDL++ ++R++RK K + NR E V
Sbjct: 61 KNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTR----------INRKSRDRGDQEVFV 110
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
++++ ++ V + +D+ I EI+R+K F + P+ EAV Q+ L+ HDF+ F + ET
Sbjct: 111 AELQEMQETQVDNDAYDDNEI-EIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFTDRETD 169
Query: 269 EINIVYKRKEGGYGLI 222
+IVY+RK+G YGLI
Sbjct: 170 GTSIVYRRKDGKYGLI 185
[231][TOP]
>UniRef100_Q49VV1 Uncharacterized protein SSP1964 n=1 Tax=Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305
RepID=Y1964_STAS1
Length = 190
Score = 82.0 bits (201), Expect = 4e-14
Identities = 50/136 (36%), Positives = 76/136 (55%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K +RAEE + +YA IDL++ ++R++RK K + + R+ +G P + V
Sbjct: 61 KKVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRVNRRNRN-RGEQEAFASLPEEKEAV 119
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
E + +E E D EI+R K F + P+ EAV Q++L+ HDF+ F + ET
Sbjct: 120 E---------IQNDENEADNEIEIIRAKNFSLKPMDSEEAVLQMDLLGHDFFIFTDRETD 170
Query: 269 EINIVYKRKEGGYGLI 222
+IVYKRK+G YGLI
Sbjct: 171 GTSIVYKRKDGKYGLI 186
[232][TOP]
>UniRef100_UPI00017F5F53 putative RNA-binding protein n=1 Tax=Clostridium difficile
QCD-23m63 RepID=UPI00017F5F53
Length = 183
Score = 81.6 bits (200), Expect = 5e-14
Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAE+ E +Y ID+V + ++L+K K++ D + K
Sbjct: 61 IIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKSIR---------------F 105
Query: 440 EDSTDSSVGEEEEEDDLIKEIV--RTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
+D+ + E+E+ D +E+V R K F + P++ EAV Q+EL+ HDFY F+N ++ E
Sbjct: 106 QDAEINLADEQEDYGDENQELVIQRRKKFSVKPMSEEEAVLQMELIGHDFYMFKNIDSDE 165
Query: 266 INIVYKRKEGGYGLI 222
I +VYKR GGYG+I
Sbjct: 166 IAVVYKRNNGGYGII 180
[233][TOP]
>UniRef100_Q18CN1 Putative RNA-binding protein n=1 Tax=Clostridium difficile 630
RepID=Q18CN1_CLOD6
Length = 183
Score = 81.6 bits (200), Expect = 5e-14
Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++RAE+ E +Y ID+V + ++L+K K++ D + K
Sbjct: 61 IIRAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKSIR---------------F 105
Query: 440 EDSTDSSVGEEEEEDDLIKEIV--RTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGE 267
+D+ + E+E+ D +E+V R K F + P++ EAV Q+EL+ HDFY F+N ++ E
Sbjct: 106 QDAEINLADEQEDYGDENQELVIQRRKKFSVKPMSEEEAVLQMELIGHDFYMFKNIDSDE 165
Query: 266 INIVYKRKEGGYGLI 222
I +VYKR GGYG+I
Sbjct: 166 IAVVYKRNNGGYGII 180
[234][TOP]
>UniRef100_C9BUA9 Sigma 54 modulation protein/ribosomal protein S30EA n=3
Tax=Enterococcus faecium RepID=C9BUA9_ENTFC
Length = 183
Score = 81.6 bits (200), Expect = 5e-14
Identities = 50/133 (37%), Positives = 74/133 (55%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE + +YA IDLV ++R++RK K K + R G N
Sbjct: 64 VLRAEETSPDLYASIDLVVDKLERQIRKFKTKINRKSRET-GMN---------------T 107
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
D+T E+E E+D +IVRTK + P+ EAV Q+ ++ H+F+ F++ ET +
Sbjct: 108 ADATALFNEEDENENDSELDIVRTKRLSLKPMDSEEAVLQMNMLGHNFFIFEDAETNGTS 167
Query: 260 IVYKRKEGGYGLI 222
IVY+RK+G YGLI
Sbjct: 168 IVYRRKDGKYGLI 180
[235][TOP]
>UniRef100_C8VY36 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Desulfotomaculum acetoxidans DSM 771
RepID=C8VY36_9FIRM
Length = 177
Score = 81.6 bits (200), Expect = 5e-14
Identities = 48/136 (35%), Positives = 73/136 (53%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
++R EE +Y+ IDLV +++++ + K K S GR + G P V +
Sbjct: 62 ILRGEETTGDMYSSIDLVVEKLEKQINRFKGKLSRRGRALNGV-----------PYVSET 110
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+ + D DD K I+R K F M P++V EAV Q+ L+ H F+ F N ++ N
Sbjct: 111 QAAVD---------DDAPK-ILRNKRFNMKPMSVEEAVLQMNLLGHSFFVFSNADSDRAN 160
Query: 260 IVYKRKEGGYGLIIPK 213
+VYKRK+G YGLI P+
Sbjct: 161 VVYKRKDGNYGLIEPE 176
[236][TOP]
>UniRef100_C5NVZ2 Ribosome-associated factor Y n=1 Tax=Gemella haemolysans ATCC 10379
RepID=C5NVZ2_9BACL
Length = 181
Score = 81.6 bits (200), Expect = 5e-14
Identities = 47/132 (35%), Positives = 77/132 (58%)
Frame = -3
Query: 617 VRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDVE 438
+RAEE E +YA +DLV ++R++RK K K + GR KGF E ++ +E+ E
Sbjct: 65 LRAEETNEDLYAAVDLVVDKLERQMRKHKTKINRKGRE-KGF----AEEIILTSELEEAE 119
Query: 437 DSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEINI 258
++T ++ + K ++ P+T EAV Q+EL+ HDF+ F + T EI++
Sbjct: 120 ETT--------------LDLGKVKQLKVEPMTREEAVFQMELLGHDFFAFLDNTTNEISV 165
Query: 257 VYKRKEGGYGLI 222
VYKR++ GYG++
Sbjct: 166 VYKRRDTGYGVL 177
[237][TOP]
>UniRef100_C1XLG1 Sigma 54 modulation protein; SSU ribosomal protein S30P n=1
Tax=Meiothermus ruber DSM 1279 RepID=C1XLG1_MEIRU
Length = 183
Score = 81.6 bits (200), Expect = 5e-14
Identities = 44/136 (32%), Positives = 71/136 (52%)
Frame = -3
Query: 623 GVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVED 444
G+VR EE +YA ID ++ +L++ KE+ RH
Sbjct: 65 GIVRVEEADPDMYAAIDRSIDRLEYQLKRYKERHFQRARHA------------------- 105
Query: 443 VEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEI 264
V ++ + E E++ IVRTK F M P+T +A ++E + HDF+ F+N +T +I
Sbjct: 106 VPEAVLAGSAHLETEEEAEPRIVRTKRFHMKPMTPEDAAFEMEALGHDFFVFRNADTEQI 165
Query: 263 NIVYKRKEGGYGLIIP 216
N++Y+R++G YGLI P
Sbjct: 166 NVIYRRRDGNYGLIEP 181
[238][TOP]
>UniRef100_B6FRG1 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM
1787 RepID=B6FRG1_9CLOT
Length = 178
Score = 81.6 bits (200), Expect = 5e-14
Identities = 51/139 (36%), Positives = 76/139 (54%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++R+E+ ++ +Y IDLV +I+R+LRK K K R +G N
Sbjct: 57 KGHIIRSEQVSDDMYVSIDLVEEVIERQLRKYKNKLI--ARQQEGGNFQS---------- 104
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
E E D+S +E + I+RTK F + P+ +A Q+EL+ H+F+ F N ET
Sbjct: 105 EFFEAEQDTSNNDEIK-------IIRTKRFGIKPMFPEDACVQMELLGHNFFVFSNAETD 157
Query: 269 EINIVYKRKEGGYGLIIPK 213
E+N+VYKRK YGLI P+
Sbjct: 158 EVNVVYKRKNNTYGLIEPE 176
[239][TOP]
>UniRef100_Q04E96 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Oenococcus oeni PSU-1 RepID=Q04E96_OENOB
Length = 190
Score = 81.3 bits (199), Expect = 7e-14
Identities = 48/132 (36%), Positives = 73/132 (55%)
Frame = -3
Query: 617 VRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDVE 438
+RAEE Y +DLVS + R++RK K + + R +GF + E I+PV D
Sbjct: 65 LRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGIDFNE-AIDPVPSDTN 122
Query: 437 DSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEINI 258
ED I +++R K + P+ + EAV Q+E++ HDF+ F N +T +++I
Sbjct: 123 ------------EDKKI-DVIRRKNLSLKPMDIEEAVLQMEMLDHDFFLFLNSDTNQLDI 169
Query: 257 VYKRKEGGYGLI 222
VYKR +G YGLI
Sbjct: 170 VYKRDDGKYGLI 181
[240][TOP]
>UniRef100_C5QVF5 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus
epidermidis W23144 RepID=C5QVF5_STAEP
Length = 189
Score = 81.3 bits (199), Expect = 7e-14
Identities = 50/137 (36%), Positives = 81/137 (59%), Gaps = 1/137 (0%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K +RAEE + +YA IDL++ ++R++RK K + NR + V
Sbjct: 61 KDVTLRAEERHDDLYAGIDLITNKLERQVRKYKTR----------VNRKHRDRGDQDIFV 110
Query: 449 EDVEDSTDSSVGEE-EEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEET 273
+V++ST ++ ++ E E+D+ EI+R+K F + P+ EAV Q+ L+ HDF+ F + ET
Sbjct: 111 AEVQESTANNQADDIESENDI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRET 168
Query: 272 GEINIVYKRKEGGYGLI 222
+IVY+RK+G YGLI
Sbjct: 169 DGTSIVYRRKDGKYGLI 185
[241][TOP]
>UniRef100_C0EWH6 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM
3353 RepID=C0EWH6_9FIRM
Length = 175
Score = 81.3 bits (199), Expect = 7e-14
Identities = 47/139 (33%), Positives = 76/139 (54%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++R E ++ +Y ID+ +++R +RK K K S +G+ LK + +E V
Sbjct: 57 KGTILRVEPNSTDMYVSIDMAVDLLERMIRKYKTKISKYGK-----GELKFNDEFMEEDV 111
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
++ E T I ++K F + P+ V EA Q+EL+ H+F+ F+N ET
Sbjct: 112 DNHETVT----------------ITKSKRFAIKPMDVEEACVQMELLGHNFFVFRNAETF 155
Query: 269 EINIVYKRKEGGYGLIIPK 213
E+N+VYKRK+ YGLI P+
Sbjct: 156 EVNVVYKRKDKTYGLIEPE 174
[242][TOP]
>UniRef100_B6G1P8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
13275 RepID=B6G1P8_9CLOT
Length = 190
Score = 81.3 bits (199), Expect = 7e-14
Identities = 50/132 (37%), Positives = 77/132 (58%)
Frame = -3
Query: 617 VRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDVE 438
+R EE+ + +Y IDLV + R++ IK KD R F+ +R IE + ++++
Sbjct: 70 IRVEEEQDNLYPAIDLVCDKLSRQI--IKYKDKFKTRVPGNFS---IRYEGIEELAQELD 124
Query: 437 DSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEINI 258
E EE +++ E R K F + P+++ EA+ Q+ L HDFY F++ E+ EI +
Sbjct: 125 --------YEVEEPEVVIE--RRKKFNLKPMSIEEAILQMNLTDHDFYMFKDRESFEICL 174
Query: 257 VYKRKEGGYGLI 222
VYKRKEGGYGLI
Sbjct: 175 VYKRKEGGYGLI 186
[243][TOP]
>UniRef100_A8W0Z3 Maf protein n=1 Tax=Bacillus selenitireducens MLS10
RepID=A8W0Z3_9BACI
Length = 197
Score = 81.3 bits (199), Expect = 7e-14
Identities = 49/137 (35%), Positives = 81/137 (59%), Gaps = 1/137 (0%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVR-EPVIEPVVED 444
++RAEE +YA +DLV ++R++RK K K + R +G + LK + +EP+ E
Sbjct: 76 LLRAEEKHADMYAAVDLVIEKLERQIRKHKTKVN---RKFRGEDSLKYMFKNELEPISE- 131
Query: 443 VEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEI 264
EE +DD EIVRTK F++ P+ EA+ Q++++ H+F+ F + +G
Sbjct: 132 ----------EETPDDDY--EIVRTKRFDLKPMDAEEAILQMDMLGHNFFVFSDAVSGVT 179
Query: 263 NIVYKRKEGGYGLIIPK 213
++VY+R +G YGLI P+
Sbjct: 180 SVVYRRSDGKYGLIEPE 196
[244][TOP]
>UniRef100_A8U6N5 Ribosomal subunit interface protein n=1 Tax=Carnobacterium sp. AT7
RepID=A8U6N5_9LACT
Length = 180
Score = 81.3 bits (199), Expect = 7e-14
Identities = 49/133 (36%), Positives = 77/133 (57%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE + +Y +DLVS ++R++RK K K + R +G N V+ PV+
Sbjct: 64 VLRAEETSPDLYGSVDLVSDKLERQMRKYKTKIN---RRTRGSN------VVVPPVLP-- 112
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
GEE+E + IVRTK + P+ EAV Q++++ H+F+ F++ +T +
Sbjct: 113 --------GEEQESHEDEVNIVRTKRLSLKPMDSEEAVLQMDMLGHNFFIFEDADTNGTS 164
Query: 260 IVYKRKEGGYGLI 222
IVY+RK+G YGLI
Sbjct: 165 IVYRRKDGKYGLI 177
[245][TOP]
>UniRef100_Q5HHR8 Uncharacterized protein SACOL0815 n=1 Tax=Staphylococcus aureus
subsp. aureus COL RepID=Y815_STAAC
Length = 190
Score = 81.3 bits (199), Expect = 7e-14
Identities = 48/136 (35%), Positives = 79/136 (58%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K+ +RAEE + +YA IDL++ ++R++RK K + NR E V
Sbjct: 61 KNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTR----------INRKSRDRGDQEVFV 110
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
++++ ++ V + +D+ I EI+R+K F + P+ EAV Q+ L+ HDF+ F + ET
Sbjct: 111 AELQEMQETQVDNDAYDDNEI-EIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFIDRETD 169
Query: 269 EINIVYKRKEGGYGLI 222
+IVY+RK+G YGLI
Sbjct: 170 GTSIVYRRKDGKYGLI 185
[246][TOP]
>UniRef100_Q5HQX7 Uncharacterized protein SERP0419 n=3 Tax=Staphylococcus epidermidis
RepID=Y419_STAEQ
Length = 189
Score = 81.3 bits (199), Expect = 7e-14
Identities = 50/137 (36%), Positives = 81/137 (59%), Gaps = 1/137 (0%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K +RAEE + +YA IDL++ ++R++RK K + NR + V
Sbjct: 61 KDVTLRAEERHDDLYAGIDLITNKLERQVRKYKTR----------VNRKHRDRGDQDIFV 110
Query: 449 EDVEDSTDSSVGEE-EEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEET 273
+V++ST ++ ++ E E+D+ EI+R+K F + P+ EAV Q+ L+ HDF+ F + ET
Sbjct: 111 AEVQESTTNNHADDIESENDI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRET 168
Query: 272 GEINIVYKRKEGGYGLI 222
+IVY+RK+G YGLI
Sbjct: 169 DGTSIVYRRKDGKYGLI 185
[247][TOP]
>UniRef100_C9CNP3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Enterococcus casseliflavus EC10 RepID=C9CNP3_ENTCA
Length = 185
Score = 80.9 bits (198), Expect = 9e-14
Identities = 52/133 (39%), Positives = 78/133 (58%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE + +YA IDLV ++R++RK K K NR K RE + P +
Sbjct: 64 VLRAEETSPDLYASIDLVVDKLERQIRKFKTK----------INR-KSRETALVPPTDGD 112
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+T+++ EE DL +IVRTK + P+ EAV Q+ ++ H+F+ F++ ET +
Sbjct: 113 LFTTEAN-DEETNGSDL--DIVRTKRLSLKPMDSEEAVLQMNMLGHNFFIFEDAETNGTS 169
Query: 260 IVYKRKEGGYGLI 222
IVY+RK+G YGLI
Sbjct: 170 IVYRRKDGKYGLI 182
[248][TOP]
>UniRef100_C9ACD7 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Enterococcus casseliflavus RepID=C9ACD7_ENTCA
Length = 180
Score = 80.9 bits (198), Expect = 9e-14
Identities = 52/133 (39%), Positives = 78/133 (58%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
V+RAEE + +YA IDLV ++R++RK K K NR K RE + P +
Sbjct: 59 VLRAEETSPDLYASIDLVVDKLERQIRKFKTK----------INR-KSRETALVPPTDGD 107
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+T+++ EE DL +IVRTK + P+ EAV Q+ ++ H+F+ F++ ET +
Sbjct: 108 LFTTEAN-DEETNGSDL--DIVRTKRLSLKPMDSEEAVLQMNMLGHNFFIFEDAETNGTS 164
Query: 260 IVYKRKEGGYGLI 222
IVY+RK+G YGLI
Sbjct: 165 IVYRRKDGKYGLI 177
[249][TOP]
>UniRef100_C6PFL3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Thermoanaerobacter italicus Ab9 RepID=C6PFL3_9THEO
Length = 181
Score = 80.9 bits (198), Expect = 9e-14
Identities = 48/135 (35%), Positives = 75/135 (55%)
Frame = -3
Query: 620 VVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDV 441
+ RAEE ++ +Y ID V I+R++ K K K NR E + +
Sbjct: 61 IFRAEEVSDDMYGSIDRVVDKIERQILKHKTKLK---------NRFGANESIRFEIPSVY 111
Query: 440 EDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEIN 261
+++ +EEE++ EIV+TK F + P++ EA+ Q+ L+ H+F+ F N +T IN
Sbjct: 112 QEA-------KEEEEETSFEIVKTKRFPIKPMSAEEAILQMNLLGHNFFVFTNADTDTIN 164
Query: 260 IVYKRKEGGYGLIIP 216
+VYKRK+G YGLI P
Sbjct: 165 VVYKRKDGKYGLIEP 179
[250][TOP]
>UniRef100_C6LIX7 Ribosomal subunit interface protein n=1 Tax=Bryantella
formatexigens DSM 14469 RepID=C6LIX7_9FIRM
Length = 176
Score = 80.9 bits (198), Expect = 9e-14
Identities = 52/139 (37%), Positives = 76/139 (54%)
Frame = -3
Query: 629 KHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVV 450
K ++R+E+ + +Y IDLV +I+R+LRK K K +H +G N R IE
Sbjct: 57 KGNIIRSEQVSNDMYVSIDLVEEVIERQLRKYKNKLI--AKHQEGSN---FRREFIEK-- 109
Query: 449 EDVEDSTDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETG 270
EE E + + I+RTK F + P+ +A Q+EL+ H+F+ F N ET
Sbjct: 110 ------------EETVEPEEVN-IIRTKHFGIKPMYPEDACIQMELLGHNFFVFCNAETE 156
Query: 269 EINIVYKRKEGGYGLIIPK 213
E+N+VYKRK YGLI P+
Sbjct: 157 EVNVVYKRKGNTYGLIEPE 175