AV440874 ( APZ12f06_f )

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BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV440874  APZ12f06_f
         (471 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_UPI0001A7B28D ATRSP41; RNA binding / nucleic acid bind...   214   3e-54
UniRef100_Q3E8C5 Putative uncharacterized protein At5g52040.2 n=...   214   3e-54
UniRef100_UPI0001A7B28C ATRSP41; RNA binding / nucleic acid bind...   207   2e-52
UniRef100_C0Z344 AT5G52040 protein n=1 Tax=Arabidopsis thaliana ...   207   2e-52
UniRef100_P92966 Arginine/serine-rich-splicing factor RSP41 n=1 ...   207   2e-52
UniRef100_B9DH58 AT4G25500 protein n=1 Tax=Arabidopsis thaliana ...    77   6e-13
UniRef100_A8MRZ9 AT4G25500 protein n=2 Tax=Arabidopsis thaliana ...    77   6e-13
UniRef100_P92965 Arginine/serine-rich-splicing factor RSP40 n=1 ...    77   6e-13
UniRef100_Q9M0K9 Splicing factor At-SRp40 (Fragment) n=1 Tax=Ara...    75   2e-12
UniRef100_B9R9G7 Arginine/serine-rich splicing factor, putative ...    60   7e-08
UniRef100_B4DNF0 cDNA FLJ56397, weakly similar to Mus musculus s...    59   1e-07
UniRef100_UPI000059D73E serine/arginine repetitive matrix 5 n=1 ...    58   4e-07
UniRef100_B3KS81 cDNA FLJ35737 fis, clone TESTI2003579, weakly s...    58   4e-07
UniRef100_C1H5B2 Putative uncharacterized protein n=1 Tax=Paraco...    57   5e-07
UniRef100_A9STZ6 Predicted protein n=1 Tax=Physcomitrella patens...    57   6e-07
UniRef100_Q4G0Z0 LOC100170229 protein (Fragment) n=1 Tax=Homo sa...    57   6e-07
UniRef100_UPI000179DE0C splicing factor, arginine/serine-rich 6 ...    55   2e-06
UniRef100_Q3B7L6 Splicing factor, arginine/serine-rich 6 n=1 Tax...    55   2e-06
UniRef100_Q6YW54 Os08g0385900 protein n=1 Tax=Oryza sativa Japon...    55   2e-06
UniRef100_C0SDF0 Predicted protein n=1 Tax=Paracoccidioides bras...    55   2e-06
UniRef100_Q2QKB8 Alternative splicing regulator n=1 Tax=Triticum...    54   5e-06
UniRef100_Q6K9C3 Os02g0610600 protein n=1 Tax=Oryza sativa Japon...    54   7e-06
graphical overview:
alignment
UniRef100_UPI0001A7B28D UniRef100_UPI0001A7B28D UniRef100_Q3E8C5 UniRef100_Q3E8C5 UniRef100_UPI0001A7B28C UniRef100_UPI0001A7B28C UniRef100_C0Z344 UniRef100_C0Z344 UniRef100_P92966 UniRef100_P92966 UniRef100_B9DH58 UniRef100_B9DH58 UniRef100_A8MRZ9 UniRef100_A8MRZ9 UniRef100_P92965 UniRef100_P92965 UniRef100_Q9M0K9 UniRef100_Q9M0K9 UniRef100_B9R9G7 UniRef100_B9R9G7 UniRef100_B4DNF0 UniRef100_B4DNF0 UniRef100_B4DNF0 UniRef100_B4DNF0 UniRef100_UPI000059D73E UniRef100_UPI000059D73E UniRef100_B3KS81 UniRef100_B3KS81 UniRef100_C1H5B2 UniRef100_C1H5B2 UniRef100_A9STZ6 UniRef100_A9STZ6 UniRef100_Q4G0Z0 UniRef100_Q4G0Z0 UniRef100_UPI000179DE0C UniRef100_UPI000179DE0C UniRef100_Q3B7L6 UniRef100_Q3B7L6 UniRef100_Q6YW54 UniRef100_Q6YW54 UniRef100_C0SDF0 UniRef100_C0SDF0 UniRef100_Q2QKB8 UniRef100_Q2QKB8