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[1][TOP]
>UniRef100_Q9LVQ1 Non-LTR retroelement reverse transcriptase-like n=1 Tax=Arabidopsis
thaliana RepID=Q9LVQ1_ARATH
Length = 1072
Score = 288 bits (736), Expect = 2e-76
Identities = 140/140 (100%), Positives = 140/140 (100%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT
Sbjct: 933 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 992
Query: 367 WAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRN 188
WAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRN
Sbjct: 993 WAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRN 1052
Query: 187 VILSRRHKRRWRELLLLWIR 128
VILSRRHKRRWRELLLLWIR
Sbjct: 1053 VILSRRHKRRWRELLLLWIR 1072
[2][TOP]
>UniRef100_Q0WMG9 Putative uncharacterized protein n=1 Tax=Arabidopsis thaliana
RepID=Q0WMG9_ARATH
Length = 1072
Score = 288 bits (736), Expect = 2e-76
Identities = 140/140 (100%), Positives = 140/140 (100%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT
Sbjct: 933 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 992
Query: 367 WAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRN 188
WAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRN
Sbjct: 993 WAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRN 1052
Query: 187 VILSRRHKRRWRELLLLWIR 128
VILSRRHKRRWRELLLLWIR
Sbjct: 1053 VILSRRHKRRWRELLLLWIR 1072
[3][TOP]
>UniRef100_UPI00001631A5 unknown protein n=1 Tax=Arabidopsis thaliana RepID=UPI00001631A5
Length = 289
Score = 209 bits (533), Expect = 8e-53
Identities = 88/140 (62%), Positives = 119/140 (85%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
+RLPTRQRL SWG + S +CCLC+ +TE+RDHLL C+F++QVWR+ F RLCPRQRL C+
Sbjct: 150 DRLPTRQRLASWGHIQSFDCCLCTIETESRDHLLFSCEFAAQVWRLAFSRLCPRQRLFCS 209
Query: 367 WAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRN 188
WAELLSW R S+++APSLLRKV A ++YN+WRQRN VLH++LR++ ++F++VDRE+RN
Sbjct: 210 WAELLSWMRSSSSSAPSLLRKVSAHAIIYNIWRQRNNVLHNNLRIAPIIIFKIVDREIRN 269
Query: 187 VILSRRHKRRWRELLLLWIR 128
+I SR H++RWR L++LWIR
Sbjct: 270 IISSRYHRKRWRNLMVLWIR 289
[4][TOP]
>UniRef100_Q9C6L3 Putative uncharacterized protein F2J7.11 n=1 Tax=Arabidopsis thaliana
RepID=Q9C6L3_ARATH
Length = 1213
Score = 208 bits (530), Expect = 2e-52
Identities = 94/140 (67%), Positives = 121/140 (86%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRL TRQRL SWG + S C LCSF +E+RDHLLL+C+FS+QVWR+VF R+CPRQRL +
Sbjct: 1074 NRLLTRQRLASWGHIQSDACVLCSFASESRDHLLLICEFSAQVWRLVFRRICPRQRLFSS 1133
Query: 367 WAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRN 188
W+ELLSW RQS+ AP LLRK+V+Q+VVYNLWRQRN +LH+SLR++ +V+F+LVDRE+RN
Sbjct: 1134 WSELLSWVRQSSPEAPPLLRKIVSQVVVYNLWRQRNNLLHNSLRLAPAVIFKLVDREIRN 1193
Query: 187 VILSRRHKRRWRELLLLWIR 128
+I SRR ++RWR+L+LLWIR
Sbjct: 1194 IISSRRLRKRWRKLMLLWIR 1213
[5][TOP]
>UniRef100_Q9SA04 F28K20.4 protein n=1 Tax=Arabidopsis thaliana RepID=Q9SA04_ARATH
Length = 1253
Score = 159 bits (401), Expect = 2e-37
Identities = 75/145 (51%), Positives = 105/145 (72%), Gaps = 5/145 (3%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRLPTRQRL +WG+ ++ +CCLCS E+RDHLLL C FS+ +W++VF RL P Q + +
Sbjct: 945 NRLPTRQRLAAWGVTTTTDCCLCSSRPESRDHLLLYCVFSAVIWKLVFFRLTPSQAIFNS 1004
Query: 367 WAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRN 188
WAELLSWTR +++ APSLLRK+ AQ V++LW+QRN VLH+S+ +S + VF +DREL N
Sbjct: 1005 WAELLSWTRINSSKAPSLLRKIAAQASVFHLWKQRNNVLHNSIFISPATVFHFIDRELEN 1064
Query: 187 V-----ILSRRHKRRWRELLLLWIR 128
+ IL R +++ +LW+R
Sbjct: 1065 LYRYIQILFFRQMFVKKDMDILWLR 1089
[6][TOP]
>UniRef100_Q2V3J8 Putative uncharacterized protein n=1 Tax=Arabidopsis thaliana
RepID=Q2V3J8_ARATH
Length = 146
Score = 149 bits (377), Expect = 1e-34
Identities = 72/140 (51%), Positives = 97/140 (69%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
+RLPTR RLVSWGL S CCLCS ETRDHL+L C FSS +W MV RL +
Sbjct: 7 DRLPTRARLVSWGLQISPLCCLCSQSVETRDHLILTCGFSSSIWNMVQARLRLQPVQFRV 66
Query: 367 WAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRN 188
W LLSW + STA++PS++RK+VAQ V +W+QRN +LH+ + S++F+ +DRE+ N
Sbjct: 67 WESLLSWIKLSTASSPSIIRKLVAQATVCAIWKQRNNLLHNLQDILPSIIFKNIDREIIN 126
Query: 187 VILSRRHKRRWRELLLLWIR 128
I +R H+R++R L+ LWIR
Sbjct: 127 SINARCHRRKFRSLMRLWIR 146
[7][TOP]
>UniRef100_A0MDZ1 Putative uncharacterized protein (Fragment) n=2 Tax=Arabidopsis
thaliana RepID=A0MDZ1_ARATH
Length = 96
Score = 140 bits (353), Expect = 6e-32
Identities = 70/95 (73%), Positives = 77/95 (81%)
Frame = -3
Query: 412 MVFLRLCPRQRLLCTWAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRV 233
MVFL+L Q L CTWAEL SWTRQS+ PSLLRKVVA LVVYNLWR+RN VLH+S RV
Sbjct: 1 MVFLKLYLCQPLFCTWAELFSWTRQSSPTVPSLLRKVVAHLVVYNLWRKRNNVLHNSHRV 60
Query: 232 SCSVVFRLVDRELRNVILSRRHKRRWRELLLLWIR 128
S SVVFRL+D ELRNVI SRRH +RWREL + WIR
Sbjct: 61 SFSVVFRLIDGELRNVISSRRHMKRWRELTVFWIR 95
[8][TOP]
>UniRef100_Q3EB05 Uncharacterized protein At3g25720.1 n=1 Tax=Arabidopsis thaliana
RepID=Q3EB05_ARATH
Length = 282
Score = 134 bits (337), Expect = 4e-30
Identities = 64/130 (49%), Positives = 87/130 (66%)
Frame = -3
Query: 520 VSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAELLSWTR 341
+SWGL S CCLCS ETRDHLLL C FS +W V RL + WAELL W R
Sbjct: 152 ISWGLPVSPLCCLCSCAPETRDHLLLGCSFSKALWSSVQSRLRLHSLIFLNWAELLLWIR 211
Query: 340 QSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRNVILSRRHKR 161
+S+ +APS LRK+VA VVY W+QRN +LH+S + + VF+++DR++ N I +RRHK+
Sbjct: 212 RSSTSAPSTLRKLVAHSVVYATWKQRNNMLHNSHHLDPASVFKIIDRKIINSINARRHKK 271
Query: 160 RWRELLLLWI 131
++R L+ W+
Sbjct: 272 KFRNLMSFWL 281
[9][TOP]
>UniRef100_Q3ED23 Uncharacterized protein At1g33710.1 n=1 Tax=Arabidopsis thaliana
RepID=Q3ED23_ARATH
Length = 210
Score = 131 bits (329), Expect = 4e-29
Identities = 61/139 (43%), Positives = 87/139 (62%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
+RLPT+ RL SWG+ C LCS D E RDHL L C+F+ +W V +RL
Sbjct: 71 DRLPTKTRLASWGMQLQTTCGLCSLDIEDRDHLFLTCEFACFLWHTVSVRLELPAFSFVV 130
Query: 367 WAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRN 188
W +L+ WT Q +P LRK++ Q V+Y +W+QRN LH+ + SVVF+ +DRE++N
Sbjct: 131 WNDLMDWTLQRNRRSPPTLRKLIVQSVLYAIWKQRNNFLHNHETILPSVVFKTIDREIKN 190
Query: 187 VILSRRHKRRWRELLLLWI 131
I +RR K+R+R L+ LW+
Sbjct: 191 SITARRLKKRFRRLMTLWL 209
[10][TOP]
>UniRef100_Q8LK27 Putative AP endonuclease/reverse transcriptase n=1 Tax=Brassica napus
RepID=Q8LK27_BRANA
Length = 1214
Score = 108 bits (271), Expect = 2e-22
Identities = 46/138 (33%), Positives = 80/138 (57%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRLP R R W + CC+C +TETRDHL + C S +W+ V R R ++
Sbjct: 1074 NRLPVRARTTHWSTNRPSLCCVCQRETETRDHLFIHCTLGSLIWQQVLARF-GRSQMFRE 1132
Query: 367 WAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRN 188
W +++ W + + L+K+ Q ++++W++RN LHS++ S + +F+ +DR +R+
Sbjct: 1133 WKDIIEWMLSNQGSFSGTLKKLAVQTAIFHIWKERNSRLHSAMSASHTAIFKQIDRSIRD 1192
Query: 187 VILSRRHKRRWRELLLLW 134
IL+R +R +++LL W
Sbjct: 1193 SILARITRRNFKDLLSQW 1210
[11][TOP]
>UniRef100_A7Y5V7 Ty1_Copia-element protein n=1 Tax=Arabidopsis thaliana
RepID=A7Y5V7_ARATH
Length = 438
Score = 98.2 bits (243), Expect = 3e-19
Identities = 45/93 (48%), Positives = 61/93 (65%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
+RL T+ R+++WG + S C LC ETRDHL+L CDFS VW +V R+ +
Sbjct: 346 DRLRTKLRMIAWGFLVSPVCALCQVGFETRDHLMLSCDFSVSVWALVRQRIGTPLTIFQN 405
Query: 367 WAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWR 269
W+EL+ WT+ + AAPS LRK+VAQ VVY LW+
Sbjct: 406 WSELILWTQNRSKAAPSTLRKLVAQAVVYALWK 438
[12][TOP]
>UniRef100_O65598 Putative uncharacterized protein AT4g26360 n=1 Tax=Arabidopsis
thaliana RepID=O65598_ARATH
Length = 1141
Score = 89.4 bits (220), Expect = 2e-16
Identities = 36/62 (58%), Positives = 53/62 (85%)
Frame = -3
Query: 313 LRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRNVILSRRHKRRWRELLLLW 134
LRKV A ++YN+WRQRN VLH++LR++ ++F++VDRE+RN+I SR H++RWR L++LW
Sbjct: 1080 LRKVSAHAIIYNIWRQRNNVLHNNLRIAPLIIFKIVDREIRNIISSRYHRKRWRNLMVLW 1139
Query: 133 IR 128
IR
Sbjct: 1140 IR 1141
[13][TOP]
>UniRef100_O64612 Putative reverse transcriptase n=1 Tax=Arabidopsis thaliana
RepID=O64612_ARATH
Length = 1412
Score = 78.6 bits (192), Expect = 3e-13
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 7/145 (4%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
+RL T ++ SW S+ C LC+ E+RDHL C+FSS +W + RL LLC
Sbjct: 1262 DRLTTGDKMASWNRGISSVCVLCNISAESRDHLFFSCNFSSHIWDRLTRRL-----LLCR 1316
Query: 367 W-----AELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVD 203
+ A LL + Q + L + V Q ++ LWR+RN H L + + + +D
Sbjct: 1317 YTTNFPALLLLLSGQDFSGTKRFLLRYVFQATIHTLWRERNKRRHGDLPIPSDHIIKFID 1376
Query: 202 RELRNVI--LSRRHKRRWRELLLLW 134
R+ RN + ++++ ++ + L +W
Sbjct: 1377 RQTRNRLSTITKQGLHKYADGLRIW 1401
[14][TOP]
>UniRef100_Q56W17 Putative uncharacterized protein n=1 Tax=Arabidopsis thaliana
RepID=Q56W17_ARATH
Length = 478
Score = 76.6 bits (187), Expect = 1e-12
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRL T R++SW + + C LC ETRDHL C +S++VW + +L Q
Sbjct: 335 NRLTTGDRMLSWNAGADSSCVLCHHLVETRDHLFFTCPYSAEVWSTLTRKLL-SQHFTNR 393
Query: 367 WAELLS-WTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELR 191
W +L T +S L + QL +++LW++RN H + + + + R +D+++R
Sbjct: 394 WEAILKLLTNKSLGHEVPFLTRYTFQLTLHSLWKERNGRRHGEVPQAAAQMVRFLDKQVR 453
Query: 190 NVI--LSRRHKRRWRELLLLW 134
N I + + RR+ + W
Sbjct: 454 NRISSIQSQEDRRYNGCMTCW 474
[15][TOP]
>UniRef100_O65244 F21E10.5 protein n=1 Tax=Arabidopsis thaliana RepID=O65244_ARATH
Length = 928
Score = 75.5 bits (184), Expect = 2e-12
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 3/141 (2%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
N+L T QR+ W L SS C LC+ + ETRDHL C ++S +W + L R
Sbjct: 784 NKLSTGQRMQHWNLQSSVGCVLCNNNLETRDHLFFSCAYTSGIWEALAKNLLQRS-YTTD 842
Query: 367 WAELLSW-TRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELR 191
W ++S+ + Q L + V Q VY +WR+RN H + + + +D+ +R
Sbjct: 843 WQTIISYVSGQCHDRVSCFLARSVLQASVYTIWRERNGRRHGETPNPAARLIQWIDKHIR 902
Query: 190 NV--ILSRRHKRRWRELLLLW 134
N+ ++ ++ +R+ + L +W
Sbjct: 903 NMLSVIHQKGDKRYDKGLQMW 923
[16][TOP]
>UniRef100_Q3ECT3 Uncharacterized protein At1g50080.1 n=1 Tax=Arabidopsis thaliana
RepID=Q3ECT3_ARATH
Length = 91
Score = 75.1 bits (183), Expect = 3e-12
Identities = 28/63 (44%), Positives = 48/63 (76%)
Frame = -3
Query: 319 SLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRNVILSRRHKRRWRELLL 140
S +RK+ AQ +YNLW+QRN V+H+ + + +F+L+DRE+RN+I +RR ++R+R L+
Sbjct: 28 SFIRKLAAQSTIYNLWKQRNNVVHNQVSIPAPTIFKLIDREIRNIITARRKRKRYRNLMQ 87
Query: 139 LWI 131
+W+
Sbjct: 88 IWL 90
[17][TOP]
>UniRef100_B2BXL4 Tn7 reverse transcriptase n=1 Tax=Arabidopsis lyrata subsp. lyrata
RepID=B2BXL4_ARALY
Length = 441
Score = 74.3 bits (181), Expect = 5e-12
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRL T R++SW + C C TETR+HL C +S +VW + +L R
Sbjct: 298 NRLSTGDRMMSWNAGVNLSCVFCQEQTETRNHLFFTCRYSREVWSGLTSKLLTR-HYSTD 356
Query: 367 WAELLSWTRQSTAAAPSL-LRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELR 191
W +L T L L + Q++VY++W++RN H + +++ + +D+E+R
Sbjct: 357 WTTILKLLTDKTLGNNRLFLLRYAFQILVYSIWKERNSRRHGEEPLPSALLLKRLDKEVR 416
Query: 190 NVILSRRHK--RRWRELLLLW 134
N + + R K R+ ++ W
Sbjct: 417 NKLSTIRDKGDGRYERCMITW 437
[18][TOP]
>UniRef100_Q3E7V8 Putative uncharacterized protein At1g43730.1 n=1 Tax=Arabidopsis
thaliana RepID=Q3E7V8_ARATH
Length = 320
Score = 72.0 bits (175), Expect = 3e-11
Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLR--LCPRQRLL 374
NRL TR RL SWGL A C LC+ E+R HL C F VWR R L P +L+
Sbjct: 174 NRLHTRDRLRSWGLSIPAVCLLCNSHDESRAHLFFECPFCGAVWRFFTGRANLFPPAQLM 233
Query: 373 CTWAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDREL 194
LL+ +R +L+ ++ Q VY +WR+RNL LH+ V R+ D L
Sbjct: 234 YCLIWLLNPSRDKNT---TLIIRLAFQAYVYAIWRERNLCLHTG-------VARVFDSVL 283
Query: 193 RNVILSRR 170
+++ L+ R
Sbjct: 284 KDIQLTIR 291
[19][TOP]
>UniRef100_O82216 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=O82216_ARATH
Length = 1216
Score = 72.0 bits (175), Expect = 3e-11
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRL T R+++W + C CS ETRDHL C +SS++W + + + R
Sbjct: 801 NRLSTGDRMMTWNNGTPTTCVFCSSPMETRDHLFFQCCYSSEIWTSIAKNVY-KDRFSTK 859
Query: 367 WAELLSWTRQSTA-AAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELR 191
W+ ++++ S S L + Q+ ++++WR+RN H S S + R +D+ +R
Sbjct: 860 WSAVVNYISDSQPDRIQSFLSRYTFQVSIHSIWRERNSRRHGEKSRSASNLIRQIDKTIR 919
Query: 190 NVILSRRHK 164
N + + + K
Sbjct: 920 NQLSTIKKK 928
[20][TOP]
>UniRef100_O64478 Putative uncharacterized protein At2g19140 n=1 Tax=Arabidopsis
thaliana RepID=O64478_ARATH
Length = 313
Score = 71.6 bits (174), Expect = 3e-11
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = +2
Query: 242 RAVKNKIPLPPQVVHHELRDHFPKERRSRCSRLPSPREKLGPSAEKPLT 388
R V++ IPLPP+VVHH++ DHFPKERR+R RL PREKL PSAE+ LT
Sbjct: 2 RVVEDIIPLPPEVVHHKMSDHFPKERRNRWRRLSCPREKLRPSAEQRLT 50
[21][TOP]
>UniRef100_O81068 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=O81068_ARATH
Length = 1529
Score = 71.2 bits (173), Expect = 5e-11
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 8/153 (5%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRL T R+ +W C LC+ ETRDHL C ++S VW + QRLL T
Sbjct: 1377 NRLSTGDRIKAWNSGQLVTCTLCNNAEETRDHLFFSCQYTSYVWEAL------TQRLLST 1430
Query: 367 -----WAELLSWTRQSTAAAPSL-LRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLV 206
W L + S L L + V Q +Y++WR+RN H + + + +L+
Sbjct: 1431 NYSRDWNRLFTLLCTSNLPRDHLFLFRYVFQASIYHIWRERNARRHGEISSPTNRLIKLI 1490
Query: 205 DRELRNVILSRRH--KRRWRELLLLWIR*LSPN 113
D+ +RN I S R + + + LW P+
Sbjct: 1491 DKTVRNRISSIRDTGDHNYNDCMQLWFSMRQPH 1523
[22][TOP]
>UniRef100_Q25BJ7 Putative uncharacterized protein n=1 Tax=Brassica oleracea
RepID=Q25BJ7_BRAOL
Length = 147
Score = 70.5 bits (171), Expect = 8e-11
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Frame = -3
Query: 544 RLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTW 365
RL T R+ W + C LC ET DHL C +S+Q+W ++ R W
Sbjct: 4 RLSTGDRMRGWNMNVDTSCVLCQEPLETADHLFFKCPYSTQIWE-ALMKGVMESRFTMEW 62
Query: 364 AELLSWTRQST--AAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELR 191
++++ R+S+ + + + + Q V+ +W +RN H+ L V+ + +D+ +R
Sbjct: 63 ERIITFLRESSNWSKVKLFVSRYILQSTVHAIWMERNRRKHNELPSPSVVLIKRLDKNMR 122
Query: 190 N--VILSRRHKRRWRELLLLW 134
N IL RR + E + W
Sbjct: 123 NRLTILQRRGDKELAEGMTFW 143
[23][TOP]
>UniRef100_O64473 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=O64473_ARATH
Length = 1447
Score = 69.7 bits (169), Expect = 1e-10
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
+RL T R+ +W VSS C C+ T++RDHL C +SS+VW + + R
Sbjct: 1303 DRLSTGDRMANWKGVSSGSCVFCNHPTKSRDHLFFNCPYSSEVWTVTAKNIL-TTRFTTD 1361
Query: 367 WAELLSWTRQ-STAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELR 191
W LL+ + L + Q VY++W +RN H + S + + +D+++R
Sbjct: 1362 WHLLLNTVSSLQQNRVENFLVRYAFQASVYSIWSERNRRRHGNTLHSATRLIGWIDKQVR 1421
Query: 190 NVILSRRHK--RRWRELLLLW 134
N++ S R K R + L +W
Sbjct: 1422 NILSSIRIKGDRHYDAGLQMW 1442
[24][TOP]
>UniRef100_A0MF55 Putative uncharacterized protein (Fragment) n=2 Tax=Arabidopsis
thaliana RepID=A0MF55_ARATH
Length = 297
Score = 69.7 bits (169), Expect = 1e-10
Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRM--VFLRLCPRQRLL 374
NRL TR RL +WGL AEC LC+ ++R HL C FS VWR L P +L+
Sbjct: 152 NRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFSGVVWRFFTASTNLNPPAQLM 211
Query: 373 CTWAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFR----LV 206
LLS +R+ L+ ++ VY +WR+RN LHS + S + + ++
Sbjct: 212 DCLNWLLSPSREKNIC---LIIRLAFHSCVYAIWRERNQRLHSGVSRSTESILKDIQLII 268
Query: 205 DRELRNVILSRRHKRRWRELLLLW 134
L + S H+ LL W
Sbjct: 269 RARLDPLSRSTAHQPNALSLLGTW 292
[25][TOP]
>UniRef100_Q9XIH8 Putative non-LTR retrolelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=Q9XIH8_ARATH
Length = 323
Score = 69.3 bits (168), Expect = 2e-10
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Frame = -3
Query: 544 RLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTW 365
RL TR RL WGL C LC+ ET DHL C FS+++W +R L +
Sbjct: 178 RLHTRDRLTQWGLNIPTVCVLCNVVDETHDHLFFQCQFSNEIWSFFMIRAGMTPPHL--F 235
Query: 364 AELLSWTRQSTAAAP-SLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELR 191
+L W + ++++ SL+ K++ Q VY +WR+RN +H++ + + + V + +R
Sbjct: 236 GPILLWLKSASSSKNLSLIIKLLFQASVYLIWRERNCRIHTTHSRTPPTIIKEVQQLIR 294
[26][TOP]
>UniRef100_Q9S9V5 AT4g04650 protein n=1 Tax=Arabidopsis thaliana RepID=Q9S9V5_ARATH
Length = 332
Score = 69.3 bits (168), Expect = 2e-10
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRM--VFLRLCPRQRLL 374
NRL TR RL +WGL AEC LC+ ++R HL C FS VWR L P +L+
Sbjct: 152 NRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFSGVVWRFFTASTNLNPPAQLM 211
Query: 373 CTWAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDREL 194
LLS +R+ L+ ++ VY +WR+RN LHS + S + + + +
Sbjct: 212 DCLNWLLSPSREKNIC---LIIRLAFHSCVYAIWRERNQRLHSGVSRSTESILKDIQLII 268
Query: 193 R 191
R
Sbjct: 269 R 269
[27][TOP]
>UniRef100_Q9C8I3 Putative uncharacterized protein F19C24.27 n=1 Tax=Arabidopsis
thaliana RepID=Q9C8I3_ARATH
Length = 629
Score = 68.6 bits (166), Expect = 3e-10
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRL T R+ W S +C CS ETRDHL C ++S +W + + + R
Sbjct: 485 NRLSTGYRMQLWNNGSDVKCTFCSTSIETRDHLFFSCSYASAIWTAIAKNVL-QHRFSTD 543
Query: 367 WAELLSWTRQS-TAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELR 191
W ++++ ++ T S L + + QL V+ +W++RN H + + + +D+++R
Sbjct: 544 WQTIVNYISETQTDRIRSFLSRYIFQLTVHTVWKERNDRRHGEEPRTSANLISWMDKQIR 603
Query: 190 N--VILSRRHKRRWRELLLLW 134
N I+ RR+ L +W
Sbjct: 604 NQLSIIISTGDRRYENGLQVW 624
[28][TOP]
>UniRef100_Q3E9D7 Uncharacterized protein At5g18880.1 n=1 Tax=Arabidopsis thaliana
RepID=Q3E9D7_ARATH
Length = 295
Score = 68.6 bits (166), Expect = 3e-10
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Frame = -3
Query: 544 RLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTW 365
RLPTR RL WG+ + LCS ET HL C FS +W + P
Sbjct: 151 RLPTRDRLRGWGMNIPSSWVLCSNGDETHAHLFFECSFSLAIWEFFASKFRPSPPFGLPA 210
Query: 364 AELLSWTRQSTAAAPS-LLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRN 188
A SW Q + S + K++ Q VY++W++RN + +S+ S S + +DR +RN
Sbjct: 211 AS--SWILQLPLRSHSTTILKLLLQSAVYHVWKERNARIFTSISSSASSLRLAIDRTMRN 268
Query: 187 VILS 176
+LS
Sbjct: 269 RLLS 272
[29][TOP]
>UniRef100_Q5Q0G1 Putative uncharacterized protein n=1 Tax=Arabidopsis thaliana
RepID=Q5Q0G1_ARATH
Length = 152
Score = 67.8 bits (164), Expect = 5e-10
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRL T R++ W + ++ C C ETR+HL C +S+ VW + +L QR
Sbjct: 8 NRLSTGDRMLQWNMGVNSCCVFCHAPVETRNHLFFACQYSADVWTGLSRKLL-SQRFSTD 66
Query: 367 WAELLSW-TRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELR 191
W ++ T S L + QL V+++W++RN H + S + R +D++ R
Sbjct: 67 WDMIIKLITDTSLGKGCLFLVRYTFQLTVHSIWKERNGHRHGEAPIPSSQLTRRLDKQTR 126
Query: 190 NVILSRRH--KRRWREL-LLLWIR 128
N I S R RR+ + L+W++
Sbjct: 127 NRISSIRELGDRRYEDYGDLVWLK 150
[30][TOP]
>UniRef100_Q9LJP6 Non-LTR retroelement reverse transcriptase-like protein n=1
Tax=Arabidopsis thaliana RepID=Q9LJP6_ARATH
Length = 637
Score = 67.0 bits (162), Expect = 9e-10
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRL T RL W + A C C + ETRDHL C +SSQ+W + + R + +
Sbjct: 302 NRLATGDRLYKWNSEARATCVFCDEELETRDHLFFSCPYSSQIW-IALAKGLLNGRNVSS 360
Query: 367 WAELLSWTRQSTAAAPSLLR-KVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELR 191
W+ + S+ + + Q ++++LWR+RN H + S + +L+D+ +R
Sbjct: 361 WSLITPHLLDSSQPYLHVFTLRYTFQALIHSLWRERNGRRHGEPAIPASKLTKLIDKNIR 420
Query: 190 N 188
N
Sbjct: 421 N 421
[31][TOP]
>UniRef100_Q0WWU5 Putative non-LTR reverse transcriptase n=1 Tax=Arabidopsis thaliana
RepID=Q0WWU5_ARATH
Length = 278
Score = 67.0 bits (162), Expect = 9e-10
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRL T RL W + A C C + ETRDHL C +SSQ+W + + R + +
Sbjct: 134 NRLATGDRLYKWNSEARATCVFCDEELETRDHLFFSCPYSSQIW-IALAKGLLNGRNVSS 192
Query: 367 WAELLSWTRQSTAAAPSLLR-KVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELR 191
W+ + S+ + + Q ++++LWR+RN H + S + +L+D+ +R
Sbjct: 193 WSLITPHLLDSSQPYLHVFTLRYTFQALIHSLWRERNGRRHGEPAIPASKLTKLIDKNIR 252
Query: 190 N 188
N
Sbjct: 253 N 253
[32][TOP]
>UniRef100_Q9T0D8 Putative uncharacterized protein AT4g11710 n=1 Tax=Arabidopsis
thaliana RepID=Q9T0D8_ARATH
Length = 473
Score = 66.6 bits (161), Expect = 1e-09
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRL T R+ W + A C LC+ E+RDHL C F++++W + +
Sbjct: 328 NRLSTGDRMTLWNMGVDATCILCNKALESRDHLFFSCPFATEIWEPL-AKTIYNTCFYTD 386
Query: 367 WAELL-SWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELR 191
W ++ + +R L + + Q+ +Y LWR+RN H + S S + +D+ +R
Sbjct: 387 WQTIINNVSRNWPDRIAGFLARCILQVTIYTLWRERNERKHGASPNSSSRLISWIDKHIR 446
Query: 190 NVILSRRHK--RRWRELLLLWIR 128
N +++ + RR+ +W++
Sbjct: 447 NHLMAIKQSGDRRFDRGFQVWLQ 469
[33][TOP]
>UniRef100_Q9FYJ4 F17F8.5 n=1 Tax=Arabidopsis thaliana RepID=Q9FYJ4_ARATH
Length = 872
Score = 66.6 bits (161), Expect = 1e-09
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAE--CCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLL 374
NRLPT R++ W S C LC+ +++T +HL C ++S VW + + + R
Sbjct: 726 NRLPTGDRMLKWNSSGSVSGNCVLCTNNSKTLEHLFFSCSYASTVWAALAKGIW-KTRYS 784
Query: 373 CTWAELLSW-TRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRE 197
W+ LL+ + L + + Q +Y++WR+RN H + + + V +D++
Sbjct: 785 TRWSHLLTHISTHFQDRVEGFLTRYIFQATIYHVWRERNGRRHDAAPNTPATVIGWIDKQ 844
Query: 196 LRN--VILSRRHKRRWRELLLLWIR 128
RN I+ + RR+ + W+R
Sbjct: 845 TRNQITIIRQSGDRRYDKAFQAWLR 869
[34][TOP]
>UniRef100_Q9SY58 F14N23.4 n=1 Tax=Arabidopsis thaliana RepID=Q9SY58_ARATH
Length = 1161
Score = 66.2 bits (160), Expect = 1e-09
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLC----PRQR 380
NRL TR RL WG C LC+ E+R+HL C FSS++W F+R P Q
Sbjct: 1009 NRLHTRDRLRRWGFSIPPTCVLCNDLDESREHLFFRCQFSSEIWSF-FMRALNLNPPPQF 1067
Query: 379 LLC-TWAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHS-SLRVSCSVVFRLV 206
+ C W S R T L+ K++ VY +WR+RNL +HS S+R + L+
Sbjct: 1068 MHCLLWTLTASRDRNIT-----LITKLLFHASVYFIWRERNLRIHSNSVRPA-----HLI 1117
Query: 205 DRELRNVILSR 173
+E++ ++ +R
Sbjct: 1118 IKEIQLIVRAR 1128
[35][TOP]
>UniRef100_Q9ZVF0 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=Q9ZVF0_ARATH
Length = 1449
Score = 65.9 bits (159), Expect = 2e-09
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
+RL T +++ W C LC TE+RDHL C FSS+VW M + +
Sbjct: 1305 DRLSTGDKMLLWNRGLQGTCLLCRNATESRDHLFFSCSFSSEVWEM-SAKSIYKSSYSTD 1363
Query: 367 WAELLSWTRQS-TAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELR 191
W LL+ +++ S + + + Q+ VY +WR+RN H + + R +D+++R
Sbjct: 1364 WRHLLTKIQENWKDRVESFIARYIFQVSVYAIWRERNRRKHGRNPNQAAQLVRWIDKQIR 1423
Query: 190 NVI--LSRRHKRRWRELLLLWIR 128
+ + + RR+ + W++
Sbjct: 1424 DQLSAIKLMGDRRYDQGFQFWLK 1446
[36][TOP]
>UniRef100_Q9FL83 Non-LTR retroelement reverse transcriptase-like protein n=1
Tax=Arabidopsis thaliana RepID=Q9FL83_ARATH
Length = 1223
Score = 65.9 bits (159), Expect = 2e-09
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Frame = -3
Query: 544 RLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTW 365
RLPT R+++W + +C C ETRDHL C F+S +W + R + + W
Sbjct: 1080 RLPTGDRMINWANGIATDCIFCQGTLETRDHLFFTCSFTSVIW-VDLARGIFKTQYTSHW 1138
Query: 364 AELL-SWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRN 188
++ + T LR+ V Q +Y +WR+RN H + S + +D+++RN
Sbjct: 1139 QSIIEAITNSQHHRVEWFLRRYVFQATIYIVWRERNGRRHGEPPNTASQLVGWIDKQIRN 1198
Query: 187 VILS--RRHKRRWRELLLLWIR 128
+ S + +R+ L +W +
Sbjct: 1199 QLSSICLKGDKRYDGSLQVWFQ 1220
[37][TOP]
>UniRef100_Q9FZF6 T2E6.13 n=1 Tax=Arabidopsis thaliana RepID=Q9FZF6_ARATH
Length = 165
Score = 65.1 bits (157), Expect = 3e-09
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Frame = -3
Query: 541 LPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWA 362
L T R+ W S +C CS ETRDHL C ++S +W + + + R W
Sbjct: 23 LSTGDRMQFWNNGSDVKCTFCSTSIETRDHLFFSCSYASSIWTAIAKNVL-QHRFSTDWQ 81
Query: 361 ELLSWTRQS-TAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRN- 188
++++ ++ T S L + + QL V+ +W++RN H + + + +D+++RN
Sbjct: 82 AIVNYISETQTDRIRSFLSRYIFQLTVHTVWKERNDRRHGEEPRTSANLISWMDKQIRNQ 141
Query: 187 -VILSRRHKRRWRELLLLW 134
I+ RR+ L +W
Sbjct: 142 LSIIISTGDRRYENGLQVW 160
[38][TOP]
>UniRef100_Q9LJX3 Genomic DNA, chromosome 3, P1 clone:MCE21 n=1 Tax=Arabidopsis
thaliana RepID=Q9LJX3_ARATH
Length = 310
Score = 64.7 bits (156), Expect = 4e-09
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NR+ T R+V W + C LC ETRDHL +C +S +VW + + + R
Sbjct: 163 NRMATGDRMVLWNQHVNTSCSLCDEPMETRDHLFFVCTYSRKVWEDIAKPIL-QHRFSLD 221
Query: 367 WAELLSWT-RQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELR 191
W ++L++ + + + + K V Q ++++W +RN H + +++D+ +R
Sbjct: 222 WKDILNYVCERDSDKTRNFIIKHVFQNTIHSVWGERNARRHGEQPSPVGKLVKMIDKNMR 281
Query: 190 NVILSRR 170
N + + R
Sbjct: 282 NKLSTIR 288
[39][TOP]
>UniRef100_C5YQI7 Putative uncharacterized protein Sb08g001155 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5YQI7_SORBI
Length = 370
Score = 63.9 bits (154), Expect = 7e-09
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Frame = -3
Query: 535 TRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAEL 356
T +R GL SSA C +C ET DH+LL C FS +VW M +LC + ++ +
Sbjct: 248 TAERRFRHGLQSSATCVMCDQLPETIDHILLGCCFSKEVWHMCLNKLCLQDLVMVNEEHV 307
Query: 355 LSWTRQSTAAAPSLLRK---VVAQLVVYNLWRQRN 260
+SW ++ P +LR+ + LV + LW++RN
Sbjct: 308 MSWWVKNRKGVPKVLRRGFDSLFFLVGWTLWKERN 342
[40][TOP]
>UniRef100_Q9M1L6 Putative uncharacterized protein F18P9_50 n=1 Tax=Arabidopsis
thaliana RepID=Q9M1L6_ARATH
Length = 534
Score = 62.4 bits (150), Expect = 2e-08
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRL T ++LV W ++ C C ETR+H+ C +SS VW + L Q +
Sbjct: 127 NRLATGEKLVKWNNDANGGCSFCDEAMETREHIFFSCPYSSAVWSALTKDLL-GQLFTTS 185
Query: 367 WAELLS-WTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELR 191
W + + T + + V QL ++ LWR+RN H + + S + +L+D+ ++
Sbjct: 186 WESMTALLTDPPRPKVHMFVLRYVFQLSIHTLWRERNGRRHGASPIPSSKLAKLIDKNVQ 245
Query: 190 N 188
N
Sbjct: 246 N 246
[41][TOP]
>UniRef100_Q9LR94 T23E23.16 n=1 Tax=Arabidopsis thaliana RepID=Q9LR94_ARATH
Length = 653
Score = 62.0 bits (149), Expect = 3e-08
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRL T +++ W S C LC+ + ETR+HL C +++++W + + + +
Sbjct: 509 NRLSTGDKMLQWNRRLSPTCVLCNNNIETRNHLFFSCCYTAEIWENLAKNIY-KAKFSTN 567
Query: 367 WAELLSWTRQSTA---AAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRE 197
W+ +L T ST S L + + Q ++ +W +RN H S + + +D++
Sbjct: 568 WSTIL--TSVSTTWRNRTESFLARYIFQATIHTIWHERNGRRHGERSNSATHLIWWLDKQ 625
Query: 196 LRNVI--LSRRHKRRWRELLLLWIR 128
+RN I ++ R+ + L LW +
Sbjct: 626 MRNQISTIAASGDHRYDKPLQLWFQ 650
[42][TOP]
>UniRef100_O81284 AT4g02490 protein n=1 Tax=Arabidopsis thaliana RepID=O81284_ARATH
Length = 657
Score = 62.0 bits (149), Expect = 3e-08
Identities = 27/44 (61%), Positives = 31/44 (70%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVW 416
NRL TR RL SWGL+ AEC LC+ ETRDHL C FSS++W
Sbjct: 605 NRLHTRDRLRSWGLIVPAECVLCNLVDETRDHLFFACRFSSRIW 648
[43][TOP]
>UniRef100_A0MEE0 Putative uncharacterized protein (Fragment) n=2 Tax=Arabidopsis
thaliana RepID=A0MEE0_ARATH
Length = 196
Score = 62.0 bits (149), Expect = 3e-08
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 3/141 (2%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRL T + +W C LC ETR+ L C ++S+VWR + RL
Sbjct: 44 NRLSTGDHIKAWNSGQQVTCTLCGNAEETRNLLFFSCHYTSEVWRTLTQRLLSND-YSRD 102
Query: 367 WAELLSWTRQSTAAAPSL-LRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELR 191
W LL + L L + V Q VY++WR+RN H + + + + +D+ +R
Sbjct: 103 WNRLLPLLCNTNMPTDLLFLFRYVFQASVYHIWRERNARRHGEISSPPNRLIKFIDKNVR 162
Query: 190 NVILSRRH--KRRWRELLLLW 134
N I S R + L LW
Sbjct: 163 NRINSIRDTGDHNYNACLQLW 183
[44][TOP]
>UniRef100_Q9C7L9 Putative uncharacterized protein F14C21.48 n=1 Tax=Arabidopsis
thaliana RepID=Q9C7L9_ARATH
Length = 137
Score = 61.6 bits (148), Expect = 4e-08
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Frame = -3
Query: 523 LVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAELLSW- 347
++ W ++ C LC + ETRDHL C F S++W ++ + + + W++LL
Sbjct: 1 MMKWIGGATGTCVLCDNNIETRDHLFFSCPFVSEIWAVIAKGIF-KDKYSTDWSQLLDHV 59
Query: 346 TRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRNVI--LSR 173
+ + S L + Q VY +W +RN H S +++ +D+ +RN I + R
Sbjct: 60 SNANQTQLESFLSRSAFQATVYTIWGERNGRRHGEEPHSTTLLTTWIDKHIRNKISTIRR 119
Query: 172 RHKRRWRELLLLWI 131
RR+ E W+
Sbjct: 120 MGDRRYDEAYQAWL 133
[45][TOP]
>UniRef100_Q9LNZ2 F9C16.26 n=1 Tax=Arabidopsis thaliana RepID=Q9LNZ2_ARATH
Length = 1902
Score = 61.2 bits (147), Expect = 5e-08
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Frame = -3
Query: 541 LPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWA 362
+P+ L WGL + C LC+ ETRDHL C FSSQVWR F ++
Sbjct: 1757 MPSFIGLRRWGLNIPSSCVLCNSCDETRDHLFFDCHFSSQVWR--FFISASGLSPPFSFK 1814
Query: 361 ELLSWTRQ-STAAAPSLLRKVVAQLVVYNLWRQRNLVLHS-SLRVSCSVV--FRLVDREL 194
+ L W R S S + K++ Q V+Y W++ N +HS + R S V+ +L R L
Sbjct: 1815 DSLLWMRSPSPDKNISFILKILFQAVIYFTWKEHNARIHSATFRSSAQVIKDIQLTVRAL 1874
Query: 193 RNVILSRRHKR 161
+ + +H++
Sbjct: 1875 LDPLSRLQHQK 1885
[46][TOP]
>UniRef100_Q6DYD9 Putative uncharacterized protein n=1 Tax=Arabidopsis thaliana
RepID=Q6DYD9_ARATH
Length = 137
Score = 61.2 bits (147), Expect = 5e-08
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Frame = -3
Query: 523 LVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAELLSW- 347
++ W ++ C LC + ETRDHL C F S++W ++ + + + W++LL
Sbjct: 1 MMKWIGGATGTCVLCDNNIETRDHLFFSCPFVSEIWAVIAKGIF-KDKYSTDWSQLLDHV 59
Query: 346 TRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELRNVI--LSR 173
+ + S L + Q VY +W +RN H S +++ +D+ +RN I + R
Sbjct: 60 SNANQTQLESYLSRSAFQATVYTIWGERNGRRHGEEPHSTTLLTTWIDKHIRNKISTIRR 119
Query: 172 RHKRRWRELLLLWI 131
RR+ E W+
Sbjct: 120 MGDRRYDEAYQAWL 133
[47][TOP]
>UniRef100_Q5U6D4 Orf147a protein n=1 Tax=Beta vulgaris subsp. vulgaris
RepID=Q5U6D4_BETVU
Length = 147
Score = 60.8 bits (146), Expect = 6e-08
Identities = 32/96 (33%), Positives = 50/96 (52%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
+RL T RL +G+V C LC ETRDHL +C+FS ++W + L QR
Sbjct: 24 DRLATCDRLQKFGIVCDQLCVLCGNVDETRDHLFFVCEFSYEIWSSLLCWL-GIQRTAGD 82
Query: 367 WAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRN 260
W +L + ++ S + ++ + VY +WR+RN
Sbjct: 83 WQGVLQSAHCQSNSSASCIFRMCISIAVYFIWRERN 118
[48][TOP]
>UniRef100_C5Z057 Putative uncharacterized protein Sb09g003970 n=1 Tax=Sorghum bicolor
RepID=C5Z057_SORBI
Length = 938
Score = 60.8 bits (146), Expect = 6e-08
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Frame = -3
Query: 544 RLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTW 365
RL T R GL SA C LC ET DHLLL C +S +VW + +Q T
Sbjct: 800 RLWTAARRARHGLQQSAVCSLCGQQDETSDHLLLACVYSREVWFRLLSIANLQQHAPGTD 859
Query: 364 AELLSWTRQSTAAAPSLLRKV---VAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDREL 194
L+ W Q+ + + +RK+ + LV + +W++RN SCS++ + E+
Sbjct: 860 DILVDWWLQTRSIIHTDVRKLFDSIVLLVTWEIWKERNRRTFDGAHRSCSLLLTRIQEEM 919
Query: 193 RN 188
+
Sbjct: 920 ES 921
[49][TOP]
>UniRef100_C5WS60 Putative uncharacterized protein Sb01g014193 n=1 Tax=Sorghum
bicolor RepID=C5WS60_SORBI
Length = 195
Score = 60.5 bits (145), Expect = 8e-08
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Frame = -3
Query: 502 SSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAELLSWTRQSTAAA 323
SSA C +C ET DH+LL C FS QVW + R C +Q + ++SW Q+
Sbjct: 70 SSATCVMCDQLPETIDHILLGCCFSKQVWHLCLNRFCLQQFVTVNEEHVMSWWIQNRKGV 129
Query: 322 PSLLRK---VVAQLVVYNLWRQRN 260
P +LR+ + LV + LW++RN
Sbjct: 130 PKVLRRGFDSLFFLVGWTLWKERN 153
[50][TOP]
>UniRef100_C5Y5G9 Putative uncharacterized protein Sb05g023233 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5Y5G9_SORBI
Length = 528
Score = 60.1 bits (144), Expect = 1e-07
Identities = 40/119 (33%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Frame = -3
Query: 544 RLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTW 365
RL T R GL A C LC + ET DHLLL C F+ +VW + R
Sbjct: 388 RLWTSDRRHRHGLQGDASCALCDQEDETADHLLLGCVFTREVWHRLLSSFRLPLRPPAAP 447
Query: 364 AELLSWTRQSTAAAPSLLRK---VVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRE 197
+ L+ W S P LR+ V LV +++W++RN LR S V R + +E
Sbjct: 448 STLVDWWLSSRGLLPRPLRRGFDSVVLLVAWSIWKERNRRTFEDLRSSAIEVVRSIVQE 506
[51][TOP]
>UniRef100_B9GLA0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GLA0_POPTR
Length = 949
Score = 59.7 bits (143), Expect = 1e-07
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
+RL T RL S+G++ S+ C LC ET DHL C +SS +W + + L T
Sbjct: 805 DRLHTMDRLTSFGIIPSSTCVLCGMHNETHDHLFFQCTYSSILWGNISAKTLIAWPSL-T 863
Query: 367 WAELLSW---TRQSTAAAPSLLRKVVAQLVVYNLWRQRN 260
W LL W T ++ ++ ++V VY +W +RN
Sbjct: 864 WNGLLLWAGSTLRNNKEFSHIIARLVLSTSVYFIWFERN 902
[52][TOP]
>UniRef100_Q1KUP0 Putative uncharacterized protein n=1 Tax=Cleome spinosa
RepID=Q1KUP0_9ROSI
Length = 230
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLC---PRQRL 377
+RLPT RL G+ ++A C LC E+ DHL C+F++ +W F C P L
Sbjct: 110 SRLPTLDRLQRLGITATATCVLCQQAPESHDHLFFDCEFNNAIWEF-FASACYSSPPSSL 168
Query: 376 LCTWAELLSWTRQSTAAAPSL---LRKVVAQLVVYNLWRQRNL 257
CT W P L K+V V Y +W++RNL
Sbjct: 169 ECT-----DWLHNQLDDEPCTRRELSKLVLHAVAYTIWQERNL 206
[53][TOP]
>UniRef100_C5YBC0 Putative uncharacterized protein Sb06g020935 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5YBC0_SORBI
Length = 449
Score = 58.9 bits (141), Expect = 2e-07
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Frame = -3
Query: 544 RLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTW 365
RL T R GL ++ +C LC ET DHLL+ C F+ +VW + + L
Sbjct: 312 RLWTADRRRRHGLQAADDCALCDQQPETADHLLVACVFAREVWHRLLSAIGLVHLLPSDA 371
Query: 364 AELLSWTRQSTAAAPSLLRKVVAQLVV---YNLWRQRN 260
+ L+ W ++S A P LR+ LVV ++LW++RN
Sbjct: 372 SRLVGWWQESRALLPHNLRRSFDSLVVLVSWSLWKERN 409
[54][TOP]
>UniRef100_Q9LQF1 F15O4.34 n=1 Tax=Arabidopsis thaliana RepID=Q9LQF1_ARATH
Length = 236
Score = 58.5 bits (140), Expect = 3e-07
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRL T R+ W SA C LC ETRDHL CDF+S VW + R R
Sbjct: 125 NRLSTGDRMTHWNGGQSAACVLCHNAPETRDHLFFSCDFASIVWSNL-ARGIYGDRFSTH 183
Query: 367 WAELLSWTRQS-TAAAPSLLRKVVAQLVVYNLWRQRN 260
W +L+ S S + + Q V+ +WR+RN
Sbjct: 184 WQDLIQAISGSWMTPLDSFFARYLFQATVHTIWRERN 220
[55][TOP]
>UniRef100_Q7XU53 OSJNBa0006A01.18 protein n=1 Tax=Oryza sativa RepID=Q7XU53_ORYSA
Length = 1189
Score = 57.8 bits (138), Expect = 5e-07
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NR+ T RL + G ++ C LC DTET HL+ +C ++ ++WR+V +Q
Sbjct: 1048 NRVWTSDRLATRGWRNNGHCPLCRCDTETAFHLVAMCRYTKRIWRLVATWAGYQQLEPAQ 1107
Query: 367 WAELLS----WTRQSTAAAPSLLRKVVAQ---LVVYNLWRQRNLVLHSSLRVSCSVVFRL 209
W E S W +S A P + +K + LVV+ +W++RN + ++ V+
Sbjct: 1108 WEEARSVHQWW--ESLANTPGIPKKGLRSLILLVVWEIWKERNRRIFDHKEMATGVLLAK 1165
Query: 208 VDRELRNVILSRRHKRRWRELL 143
+ E + + +R REL+
Sbjct: 1166 IKEEAS--LWALAGAKRLRELI 1185
[56][TOP]
>UniRef100_C5WY91 Putative uncharacterized protein Sb01g006175 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5WY91_SORBI
Length = 318
Score = 57.8 bits (138), Expect = 5e-07
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NR+ T RL+ G + CCLC + ET DHL + C+FS QVW + +
Sbjct: 192 NRIWTAARLLIRGWPNDYFCCLCIRNLETADHLFMECNFSLQVWDRIATWIREPLMAPAN 251
Query: 367 WA---ELLSWTRQSTAAAPSLLRKVV---AQLVVYNLWRQRNLVLHSSLRVSCSVVFRLV 206
W +L W + A + R+ V LV + +W++RN + + SC +FR +
Sbjct: 252 WRLTHDLRLWYLDLSIGASPIRREGVRSMIMLVSWEIWKKRNNRVFNRKYNSCVQIFRAI 311
Query: 205 DRELR 191
E +
Sbjct: 312 QEEAK 316
[57][TOP]
>UniRef100_Q84Q64 Putative uncharacterized protein OSJNBa0071M09.16 n=1 Tax=Oryza
sativa Japonica Group RepID=Q84Q64_ORYSJ
Length = 1143
Score = 56.6 bits (135), Expect = 1e-06
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NR+ T RL + G ++ C LC DTET HL+ +C ++ ++WR+V +Q
Sbjct: 1002 NRVWTSDRLATRGWRNNGHCPLCRCDTETALHLVAMCRYTKRIWRLVATWAGYQQFEPAQ 1061
Query: 367 WAELLS----WTRQSTAAAPSLLRKVVAQ---LVVYNLWRQRNLVLHSSLRVSCSVVFRL 209
W E S W +S A P + +K + LVV+ +W++RN + ++ V+
Sbjct: 1062 WEEARSVHQWW--ESLANTPGIPKKGLRSLILLVVWEIWKERNRRIFDHKEMATGVLLAK 1119
Query: 208 VDRE 197
+ E
Sbjct: 1120 IKEE 1123
[58][TOP]
>UniRef100_C5XNK6 Putative uncharacterized protein Sb03g004940 n=1 Tax=Sorghum
bicolor RepID=C5XNK6_SORBI
Length = 201
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = -3
Query: 544 RLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTW 365
RL T +R GL + +C LC ET DHLL+ C F+ +VW + + L
Sbjct: 64 RLWTAERRRRHGLHAVDDCALCDQQPETADHLLVACVFAREVWHRLLSAISLDYLLPSDV 123
Query: 364 AELLSWTRQSTAAAPSLLRKVVAQLVV---YNLWRQRN 260
+ L+ W + + A P LR+ LVV + LW++RN
Sbjct: 124 SRLVGWWQDNRAVLPQHLRRGFDSLVVLVSWTLWKKRN 161
[59][TOP]
>UniRef100_UPI0001A7B228 copper ion binding / electron carrier n=1 Tax=Arabidopsis thaliana
RepID=UPI0001A7B228
Length = 369
Score = 56.2 bits (134), Expect = 2e-06
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLL-- 374
NRL R +SWG+ + C LC+ ETR H+ C FS +VW C R+
Sbjct: 265 NRLHICDRFISWGIQVPSLCLLCNALDETRQHVFFDCPFSHEVWSF----FCSNARVTPP 320
Query: 373 CTWAELLSWTRQSTA-AAPSLLRKVVAQLVVYNLWRQRNLVLHSS 242
+ + W R + + K+ Q VY++WR+RN+ L+S+
Sbjct: 321 RMFKDSARWLRHPCRDKKVAFILKLAYQASVYHIWRERNIRLNSN 365
[60][TOP]
>UniRef100_C5XEI3 Putative uncharacterized protein Sb03g029000 n=1 Tax=Sorghum
bicolor RepID=C5XEI3_SORBI
Length = 406
Score = 56.2 bits (134), Expect = 2e-06
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLC- 371
NR+ T RL G + C LC + ET DHL + C+FS QVW V + R+ L+
Sbjct: 253 NRIWTAARLQIRGWPNDYFCSLCIRNLETADHLFMECNFSLQVWDRVATWI--REPLMAP 310
Query: 370 ----TWAELLSWTRQSTAAAPSLLRKVVAQLVV---YNLWRQRNLVLHSSLRVSCSVVFR 212
T EL W + A L R+ V +++ + +W++RN + + SC VFR
Sbjct: 311 ANWRTTHELRLWYLDLSRGASPLRREGVRSVIMLASWEIWKERNNRVFNRKYTSCVQVFR 370
Query: 211 LVDRE 197
+ E
Sbjct: 371 AIQEE 375
[61][TOP]
>UniRef100_C5YGA5 Putative uncharacterized protein Sb06g016220 n=1 Tax=Sorghum bicolor
RepID=C5YGA5_SORBI
Length = 828
Score = 55.8 bits (133), Expect = 2e-06
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Frame = -3
Query: 544 RLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTW 365
R+ T R GL A C LC + ET DHLLL C F+ +VW + +
Sbjct: 688 RIWTSDRRHRHGLQGDASCALCDQEDETADHLLLGCVFAREVWHRLLSSFRLPLQPPAAS 747
Query: 364 AELLSWTRQSTAAAPSLLRK---VVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRE 197
+ L+ W S P LR+ V LV +++W++RN +R S V R + E
Sbjct: 748 STLVDWWLSSRGLLPRALRQGFVSVVLLVAWSIWKKRNRRNFEGVRSSALEVVRSIVEE 806
[62][TOP]
>UniRef100_O64724 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=O64724_ARATH
Length = 211
Score = 55.5 bits (132), Expect = 3e-06
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
+RL T+ R++SWG + C C+ ETR HL C+F+ +VW R+ LL
Sbjct: 66 HRLHTKDRMISWGFIFPPLCLFCNTHDETRQHLFFDCEFAREVWIYFTSRVHVFPPLL-- 123
Query: 367 WAELLSWTRQSTA-AAPSLLRKVVAQLVVYNLWRQRNLVLHSS 242
+ + + W + + + ++ VY +W++RN LH S
Sbjct: 124 FEDGIRWLKNPCQDKNVTTILRLSHHASVYTIWKERNARLHDS 166
[63][TOP]
>UniRef100_C5XNW2 Putative uncharacterized protein Sb03g038480 n=1 Tax=Sorghum
bicolor RepID=C5XNW2_SORBI
Length = 399
Score = 55.5 bits (132), Expect = 3e-06
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = -3
Query: 535 TRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAEL 356
T R GL C LC + ET DHLLL C FS QVW++ + ++
Sbjct: 262 TAHRRWRHGLQDECTCVLCDHEDETMDHLLLGCVFSRQVWQLCLAAFNLQGLIVVRECRA 321
Query: 355 LSWTRQSTAAAPSLLRKVVAQ---LVVYNLWRQRN 260
+ W S P +LR+ LV ++LW++RN
Sbjct: 322 MLWWTDSRRGLPKVLRRAFDSLFFLVGWSLWKERN 356
[64][TOP]
>UniRef100_B9N2X7 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N2X7_POPTR
Length = 1046
Score = 55.5 bits (132), Expect = 3e-06
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 12/143 (8%)
Frame = -3
Query: 544 RLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTW 365
+L T+ +L +G+ C LC + E +HL C ++ +W V R C R+ W
Sbjct: 899 KLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDR-CDIPRMTKGW 957
Query: 364 AELLSWTRQSTAAAP--SLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVD---R 200
E + W S + RK+ VY++W++RN + + L + ++VF ++ R
Sbjct: 958 DEWIRWATVSWHGKSFINFSRKLSFAATVYHVWQERNARIFAGLSRTSNLVFNQIECIIR 1017
Query: 199 E----LRNVILSRRHK---RRWR 152
+ +RNV+ + +K R WR
Sbjct: 1018 DKLDLMRNVVPTNENKRIQRAWR 1040
[65][TOP]
>UniRef100_B9HQT0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HQT0_POPTR
Length = 331
Score = 55.5 bits (132), Expect = 3e-06
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 12/143 (8%)
Frame = -3
Query: 544 RLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTW 365
+L T+ +L +G+ C LC + E +HL C ++ +W V R C R+ W
Sbjct: 184 KLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDR-CDIPRMTKGW 242
Query: 364 AELLSWTRQS--TAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVD---R 200
E + W S + + RK+ VY++W++RN + + L + ++VF ++ R
Sbjct: 243 DEWIRWATVSWHGKSFVNFSRKLSFAATVYHVWQERNARIFAGLSRTSNLVFNQIECIIR 302
Query: 199 E----LRNVILSRRHK---RRWR 152
+ +RNV+ + +K R WR
Sbjct: 303 DKLDLMRNVVPTNENKRIQRAWR 325
[66][TOP]
>UniRef100_B2BXI9 Reverse transcriptase n=1 Tax=Arabidopsis lyrata subsp. lyrata
RepID=B2BXI9_ARALY
Length = 181
Score = 55.5 bits (132), Expect = 3e-06
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NR+ T R++ W A C C ET+DH+ C +S VW+ + L
Sbjct: 64 NRIATGDRMIKWNQNVDASCVFCKDSRETKDHMFFNCPYSRTVWKELVSGLL-LNNFTEK 122
Query: 367 WAELLSW-TRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDR 200
W E+++ ++ + + V Q ++++WR+RN H + +L+D+
Sbjct: 123 WLEIMTMLAKKDLDKTKGFIVRYVFQNTIHSIWRERNDRRHGEQPSPTEKIVKLIDK 179
[67][TOP]
>UniRef100_Q3EAA8 Uncharacterized protein At4g05095.1 n=1 Tax=Arabidopsis thaliana
RepID=Q3EAA8_ARATH
Length = 138
Score = 55.1 bits (131), Expect = 3e-06
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = -3
Query: 514 WGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAELLSWT-RQ 338
WGL ++C LCS + E R+HL C S VW R LL + + L+W
Sbjct: 4 WGLSIPSDCVLCSGNAEFREHLFFGCGVSFAVWGNFMFRASLTPPLL--FMDCLTWVLSP 61
Query: 337 STAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFR 212
S SL+ K+V Q +Y LW++RN LH S + + +
Sbjct: 62 SRDPNISLIIKLVFQASIYFLWKERNRRLHDHASRSSTAIIK 103
[68][TOP]
>UniRef100_C5YCL7 Putative uncharacterized protein Sb06g001955 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5YCL7_SORBI
Length = 247
Score = 55.1 bits (131), Expect = 3e-06
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Frame = -3
Query: 544 RLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTW 365
RL T R L A C LC + ET DHLLL C F+ +VW + + +
Sbjct: 107 RLWTSDRRRRHDLQDDASCALCDQEDETTDHLLLGCVFAREVWHRLLRKFRLPLQPPAAP 166
Query: 364 AELLSWTRQSTAAAPSLLRK---VVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRE 197
+ L+ W S P LR+ V LV +++W++RN L S V R + E
Sbjct: 167 STLVDWWLSSRGLLPRALRRGFDSVVLLVAWSVWKERNRRTFEGLHSSALEVVRSIVEE 225
[69][TOP]
>UniRef100_C5WTZ7 Putative uncharacterized protein Sb01g002325 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5WTZ7_SORBI
Length = 763
Score = 54.7 bits (130), Expect = 4e-06
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = -3
Query: 544 RLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTW 365
RL T +R GL + A C LCS ET DHLL+ C F ++W + LR
Sbjct: 621 RLWTAERRRRHGLQAEAACALCSQHDETIDHLLIACVFPREIWSRLLLRAGLLHLAPTEG 680
Query: 364 AELLSWTRQSTAAAPSLLRKVVAQLVV---YNLWRQRN 260
+ L W S P R+ +V+ +N+W++RN
Sbjct: 681 SALQEWWISSRKQIPIRFRRAFDSVVIVVSWNVWKERN 718
[70][TOP]
>UniRef100_C5WRS4 Putative uncharacterized protein Sb01g042140 n=1 Tax=Sorghum
bicolor RepID=C5WRS4_SORBI
Length = 742
Score = 54.7 bits (130), Expect = 4e-06
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = -3
Query: 544 RLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTW 365
RL T R GL +A C LC ET DHLLL C +S +VW + +Q T
Sbjct: 604 RLWTAARRARHGLQQTAVCSLCGQQDETSDHLLLACVYSREVWFRLLSIANLQQHAPGTD 663
Query: 364 AELLSWTRQSTAAAPSLLRK---VVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDREL 194
L W ++++ + +RK + LV + +W++RN S S++ + + E+
Sbjct: 664 DTLADWWLETSSIIHTDVRKSFDSIVLLVTWEIWKERNRRTFDGAHRSNSLLLKRIQEEM 723
Query: 193 RN 188
+
Sbjct: 724 ES 725
[71][TOP]
>UniRef100_Q9ZUF0 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=Q9ZUF0_ARATH
Length = 1352
Score = 54.3 bits (129), Expect = 6e-06
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 368
NRL T ++ W + +C C + ETRDHL C +SS VW + L + +L
Sbjct: 1226 NRLTTSDKICKWNSGARYDCVFCGEELETRDHLFFSCPYSSHVWFSLTKGLLNGRNIL-N 1284
Query: 367 WAELLSWTRQSTAAAPSLLR-KVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDREL 194
W + S+ + + Q +++LWR+RN H + + + + D+ +
Sbjct: 1285 WNLITPHLLDSSRPYLHVFTLRYAFQASIHSLWRERNCRRHGETAIPAAKLAKFTDKTM 1343
[72][TOP]
>UniRef100_C5YBQ7 Putative uncharacterized protein Sb06g000995 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5YBQ7_SORBI
Length = 395
Score = 54.3 bits (129), Expect = 6e-06
Identities = 37/110 (33%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Frame = -3
Query: 535 TRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAEL 356
T R GL S C +C +ET DH+L C FS +VW RL L
Sbjct: 260 TGHRRFRHGLQDSDICIVCDEHSETMDHILSDCPFSREVWHRCLDRLHLAHPLQLPHGRA 319
Query: 355 LSWTRQSTAAAPSLLRKVV---AQLVVYNLWRQRNLVLHSSLRVSCSVVF 215
L W S P LRK + LV ++LW++RN S SV+F
Sbjct: 320 LDWWTTSRKLVPRTLRKGLDSFVLLVGWSLWKERNARTFRGESSSASVLF 369
[73][TOP]
>UniRef100_Q9LPJ6 F6N18.6 n=1 Tax=Arabidopsis thaliana RepID=Q9LPJ6_ARATH
Length = 97
Score = 53.9 bits (128), Expect = 7e-06
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = -3
Query: 283 YNLWRQRNLVLHSSLRVSCSVVFRLVDRELRNVILSRRHKRRWREL 146
Y +WRQRN VLH+ R+ S +F+++ RE+RN I RR ++ WR L
Sbjct: 41 YQIWRQRNNVLHNDQRIHPSTLFKMIYREIRNTITGRRSRKLWRPL 86
[74][TOP]
>UniRef100_O81517 T24M8.8 protein n=1 Tax=Arabidopsis thaliana RepID=O81517_ARATH
Length = 1164
Score = 53.9 bits (128), Expect = 7e-06
Identities = 23/41 (56%), Positives = 28/41 (68%)
Frame = -3
Query: 547 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSS 425
+RLPT+ RL SWG+ C LCS ETRDHL L CDF++
Sbjct: 971 DRLPTKVRLASWGMQIDTTCGLCSLHPETRDHLFLSCDFAN 1011
[75][TOP]
>UniRef100_C5Z6Y1 Putative uncharacterized protein Sb10g007695 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5Z6Y1_SORBI
Length = 191
Score = 53.9 bits (128), Expect = 7e-06
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Frame = -3
Query: 544 RLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTW 365
RL T R GL +A C LC ET DHLLL C FS +VW + +Q +
Sbjct: 53 RLWTAARRARHGLQQTASCSLCGQQDETSDHLLLSCVFSREVWFRLLSFTNLQQHAPGSD 112
Query: 364 AELLSWTRQSTAAAPSLLRK---VVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDREL 194
L+ W + + +RK + LV + +W++RN CS++ + E+
Sbjct: 113 DSLVDWWLGTRNVIRADVRKPFDSIVLLVTWEIWKERNRRTFDGASRPCSLLLMRIQEEM 172
Query: 193 RN 188
+
Sbjct: 173 ES 174
[76][TOP]
>UniRef100_C5XCQ7 Putative uncharacterized protein Sb02g006163 (Fragment) n=1
Tax=Sorghum bicolor RepID=C5XCQ7_SORBI
Length = 890
Score = 53.5 bits (127), Expect = 1e-05
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Frame = -3
Query: 544 RLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTW 365
RL T R L SA C LC ET DHLLL C FS + W + +Q +
Sbjct: 770 RLWTAARRARHRLQQSASCSLCGQQDETSDHLLLSCVFSREAWFRLLSFTNLQQPAPGSD 829
Query: 364 AELLSWTRQSTAAAPSLLRK---VVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDREL 194
L+ W + P+ +RK + LV + +W++RN +CS++ + E+
Sbjct: 830 DTLVDWWLGTRNVIPADMRKPFDSIVLLVTWEIWKERNRRTFDGASRTCSLLLMRIQEEM 889