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[1][TOP]
>UniRef100_Q9XJ35 ATP-dependent Clp protease proteolytic subunit-related protein 1,
chloroplastic n=1 Tax=Arabidopsis thaliana
RepID=CLPR1_ARATH
Length = 387
Score = 292 bits (747), Expect = 1e-77
Identities = 145/159 (91%), Positives = 145/159 (91%)
Frame = +3
Query: 90 MATALPSPLTSQLNHEAVCSKLALPKSPFMSASKLSSSNMPCSTVPRRTRTSHCLASAKD 269
MATAL SPLTSQLNHEAVCSK LPKSPFMS SKL SSNMPCSTVPRRTR SHC ASAKD
Sbjct: 1 MATALVSPLTSQLNHEAVCSKFVLPKSPFMSGSKLFSSNMPCSTVPRRTRRSHCFASAKD 60
Query: 270 MSFDHIPKHLRGDNLKDGVMQNFKNVPQYPYGLTSAHMDMFMTEDSPVRRQAEKVTEESI 449
MSFDHIPK RGDNLKDGVMQNFKNVPQY YGL SA MDMFMTEDSPVRRQAEKVTEESI
Sbjct: 61 MSFDHIPKQFRGDNLKDGVMQNFKNVPQYFYGLNSAQMDMFMTEDSPVRRQAEKVTEESI 120
Query: 450 SSRNNYLNNGGIWSMSGMNAAHARRYSMSVQMYRGGRGG 566
SSRNNYLNNGGIWSMSGMNAA ARRYSMSVQMYRGG GG
Sbjct: 121 SSRNNYLNNGGIWSMSGMNAADARRYSMSVQMYRGGGGG 159
[2][TOP]
>UniRef100_A7QL58 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Vitis
vinifera RepID=A7QL58_VITVI
Length = 388
Score = 155 bits (391), Expect = 3e-36
Identities = 86/164 (52%), Positives = 111/164 (67%), Gaps = 6/164 (3%)
Frame = +3
Query: 90 MATALPSPLTSQLNHEAVC-----SKLALPKSPFMSASKL-SSSNMPCSTVPRRTRTSHC 251
MAT+L SPL+S ++ V S KS F+ +KL S+ + S V R R+
Sbjct: 1 MATSLLSPLSSPISPSTVDAHDVGSAGGAVKSSFLHCTKLFSAPKLGRSAVRRGFRSPSA 60
Query: 252 LASAKDMSFDHIPKHLRGDNLKDGVMQNFKNVPQYPYGLTSAHMDMFMTEDSPVRRQAEK 431
AS FDHIPK R NL+DG+M+N+KNVPQY YGL+ + MDMFMTED+P+ RQ+E+
Sbjct: 61 KAS-----FDHIPKQFREGNLQDGLMENYKNVPQYFYGLSPSQMDMFMTEDNPISRQSER 115
Query: 432 VTEESISSRNNYLNNGGIWSMSGMNAAHARRYSMSVQMYRGGRG 563
VTEESISS NY++NGG+WS+SG+N +YSMSV MYRGGRG
Sbjct: 116 VTEESISSARNYMDNGGMWSLSGVNDRGPSKYSMSVSMYRGGRG 159
[3][TOP]
>UniRef100_C6TDX0 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1
Tax=Glycine max RepID=C6TDX0_SOYBN
Length = 364
Score = 146 bits (369), Expect = 9e-34
Identities = 76/136 (55%), Positives = 98/136 (72%)
Frame = +3
Query: 156 ALPKSPFMSASKLSSSNMPCSTVPRRTRTSHCLASAKDMSFDHIPKHLRGDNLKDGVMQN 335
+L S F+ +KL + PRR +S SAK S DHIPK R +NLKDG+M+N
Sbjct: 13 SLHDSSFLHGTKLFPFSR--RVAPRRFNSS----SAK-CSLDHIPKQFRKENLKDGLMEN 65
Query: 336 FKNVPQYPYGLTSAHMDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIWSMSGMNAAH 515
+KN PQ YGL+ + MDMFMTED+P+R+Q+E+VTEESISS NY++NGG+WS+SGM +
Sbjct: 66 YKNAPQSLYGLSPSQMDMFMTEDNPIRQQSERVTEESISSAKNYIDNGGMWSLSGMGKSD 125
Query: 516 ARRYSMSVQMYRGGRG 563
A +YSMSV MYRGGRG
Sbjct: 126 ASKYSMSVSMYRGGRG 141
[4][TOP]
>UniRef100_B9HMY7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Populus
trichocarpa RepID=B9HMY7_POPTR
Length = 391
Score = 137 bits (344), Expect = 7e-31
Identities = 83/162 (51%), Positives = 106/162 (65%), Gaps = 3/162 (1%)
Frame = +3
Query: 90 MATALPSPLTSQLNHEAVCSKLALP-KSPFM-SASKLSSSNMPCSTVPRRTRTSHCLA-S 260
MAT+L SPL + N E V L KS F+ SAS SN V ++ R + + S
Sbjct: 3 MATSLLSPLAAP-NPELVYPATGLQQKSSFLPSASLFLLSNPRNQRVLQQQRCCYYKSPS 61
Query: 261 AKDMSFDHIPKHLRGDNLKDGVMQNFKNVPQYPYGLTSAHMDMFMTEDSPVRRQAEKVTE 440
A +HIP R +NLKDG+M+N+KNVPQ YGLT + MDMFMTED+P+RRQ+ VTE
Sbjct: 62 ASGNPLNHIPTQFREENLKDGLMENYKNVPQSLYGLTPSQMDMFMTEDNPIRRQSGSVTE 121
Query: 441 ESISSRNNYLNNGGIWSMSGMNAAHARRYSMSVQMYRGGRGG 566
+SISSR NYL++GG++S+SGM +YSMSV MYRGG G
Sbjct: 122 QSISSRKNYLDHGGMYSVSGMMDQGPSKYSMSVSMYRGGGRG 163
[5][TOP]
>UniRef100_A7QU07 Chromosome undetermined scaffold_175, whole genome shotgun sequence
n=1 Tax=Vitis vinifera RepID=A7QU07_VITVI
Length = 184
Score = 127 bits (318), Expect = 8e-28
Identities = 61/99 (61%), Positives = 79/99 (79%)
Frame = +3
Query: 258 SAKDMSFDHIPKHLRGDNLKDGVMQNFKNVPQYPYGLTSAHMDMFMTEDSPVRRQAEKVT 437
SAK +SFDHIPK R NL+ G+M+N+KNVPQY YGLT + MDMFMTED+P+ + +E+VT
Sbjct: 78 SAK-VSFDHIPKQFREGNLQYGLMENYKNVPQYFYGLTPSQMDMFMTEDNPISQLSERVT 136
Query: 438 EESISSRNNYLNNGGIWSMSGMNAAHARRYSMSVQMYRG 554
EE+ISS +N L+NGG+WS+SG+N +YSMSV MY G
Sbjct: 137 EENISSSHNCLDNGGMWSLSGVNDRGPSKYSMSVSMYHG 175
[6][TOP]
>UniRef100_B8LS00 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea
sitchensis RepID=B8LS00_PICSI
Length = 393
Score = 124 bits (311), Expect = 5e-27
Identities = 57/98 (58%), Positives = 76/98 (77%)
Frame = +3
Query: 273 SFDHIPKHLRGDNLKDGVMQNFKNVPQYPYGLTSAHMDMFMTEDSPVRRQAEKVTEESIS 452
SFDHIPK R +NLK+G+M+NF+N+P+ YGL + MDMF+TEDSP++RQAE+VTEESI+
Sbjct: 65 SFDHIPKQFRQENLKEGLMENFQNIPESLYGLNPSQMDMFLTEDSPIKRQAERVTEESIT 124
Query: 453 SRNNYLNNGGIWSMSGMNAAHARRYSMSVQMYRGGRGG 566
S +Y G+WS++G+N + R SMS MYRGG GG
Sbjct: 125 SAKHYREGTGMWSLTGLNDGPS-RLSMSANMYRGGGGG 161
[7][TOP]
>UniRef100_B8LL17 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea
sitchensis RepID=B8LL17_PICSI
Length = 393
Score = 124 bits (311), Expect = 5e-27
Identities = 57/98 (58%), Positives = 76/98 (77%)
Frame = +3
Query: 273 SFDHIPKHLRGDNLKDGVMQNFKNVPQYPYGLTSAHMDMFMTEDSPVRRQAEKVTEESIS 452
SFDHIPK R +NLK+G+M+NF+N+P+ YGL + MDMF+TEDSP++RQAE+VTEESI+
Sbjct: 65 SFDHIPKQFRQENLKEGLMENFQNIPESLYGLNPSQMDMFLTEDSPIKRQAERVTEESIT 124
Query: 453 SRNNYLNNGGIWSMSGMNAAHARRYSMSVQMYRGGRGG 566
S +Y G+WS++G+N + R SMS MYRGG GG
Sbjct: 125 SAKHYREGTGMWSLTGLNDGPS-RLSMSANMYRGGGGG 161
[8][TOP]
>UniRef100_B6U5D1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Zea mays
RepID=B6U5D1_MAIZE
Length = 388
Score = 114 bits (284), Expect = 7e-24
Identities = 67/145 (46%), Positives = 92/145 (63%), Gaps = 12/145 (8%)
Frame = +3
Query: 165 KSPFMSASKLSSSNMPCSTVPRRTRTS-HCLASAKDMSF----DHIPKHLRGDNLKDGVM 329
+SPF+ S+S P VPRR S CLA D F DHIPK R +NLKDG+M
Sbjct: 15 RSPFLP----STSPAPAGKVPRRPPASWRCLAYYGDGGFRKNYDHIPKQFREENLKDGLM 70
Query: 330 QNFKNVPQYPYGLTSAHMDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIWSMSGMNA 509
N+K+VPQ+ YGL++A M+MFM +D+P RQ++KVTEES+S+ +Y + G++++SGM+
Sbjct: 71 DNYKHVPQFLYGLSAAQMEMFMNDDNPYNRQSQKVTEESVSAARSY-DEFGMYTLSGMHE 129
Query: 510 AHARRY-------SMSVQMYRGGRG 563
A SMS+ M RGGRG
Sbjct: 130 GPASYSMGMGMGGSMSMSMGRGGRG 154
[9][TOP]
>UniRef100_B4F9Z4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Zea mays
RepID=B4F9Z4_MAIZE
Length = 388
Score = 113 bits (283), Expect = 9e-24
Identities = 67/145 (46%), Positives = 91/145 (62%), Gaps = 12/145 (8%)
Frame = +3
Query: 165 KSPFMSASKLSSSNMPCSTVPRRTRTS-HCLASAKDMSF----DHIPKHLRGDNLKDGVM 329
+SPF+ S+S P VPRR S CLA D F DHIPK R +NLKDG+M
Sbjct: 15 RSPFLP----STSPAPAGKVPRRPPASWRCLAYYGDGGFRKNYDHIPKQFREENLKDGLM 70
Query: 330 QNFKNVPQYPYGLTSAHMDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIWSMSGMNA 509
N+K+VPQ+ YGL+ A M+MFM +D+P RQ++KVTEES+S+ +Y + G++++SGM+
Sbjct: 71 DNYKHVPQFLYGLSDAQMEMFMNDDNPYNRQSQKVTEESVSAARSY-DEFGMYTLSGMHE 129
Query: 510 AHARRY-------SMSVQMYRGGRG 563
A SMS+ M RGGRG
Sbjct: 130 GPASYSMGMGMGGSMSMSMGRGGRG 154
[10][TOP]
>UniRef100_B9SND4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ricinus
communis RepID=B9SND4_RICCO
Length = 308
Score = 112 bits (280), Expect = 2e-23
Identities = 53/80 (66%), Positives = 66/80 (82%)
Frame = +3
Query: 327 MQNFKNVPQYPYGLTSAHMDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIWSMSGMN 506
M+N+KNVP++ YGLT + +DMFMTED+PVRRQ+E VTEESISSRNNYL +GG++S+SGM
Sbjct: 1 MENYKNVPRHLYGLTPSQLDMFMTEDNPVRRQSESVTEESISSRNNYLEHGGMYSVSGMM 60
Query: 507 AAHARRYSMSVQMYRGGRGG 566
+YSMSV MYRGG G
Sbjct: 61 DRGPSKYSMSVSMYRGGGRG 80
[11][TOP]
>UniRef100_C5YWZ8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sorghum
bicolor RepID=C5YWZ8_SORBI
Length = 388
Score = 110 bits (276), Expect = 6e-23
Identities = 66/145 (45%), Positives = 90/145 (62%), Gaps = 12/145 (8%)
Frame = +3
Query: 165 KSPFMSASKLSSSNMPCSTVPRRTRTS-HCLASAKD----MSFDHIPKHLRGDNLKDGVM 329
+SPF+ S S P +PRR S C D S+DHIPK R +NLKDG+M
Sbjct: 15 RSPFLP----SPSPAPPGRLPRRPPASWRCHGYYGDDGFRKSYDHIPKQFREENLKDGLM 70
Query: 330 QNFKNVPQYPYGLTSAHMDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIWSMSGMNA 509
N+KNVPQ+ YGL+SA M+MFM +D+P RQ++KVTEES+S+ +Y + G++++SGM+
Sbjct: 71 DNYKNVPQFLYGLSSAQMEMFMNDDNPYNRQSQKVTEESVSAARSY-DEFGMYTLSGMHE 129
Query: 510 AHARRY-------SMSVQMYRGGRG 563
A SMS+ M RGGRG
Sbjct: 130 GPASYSMGMGMGGSMSMSMGRGGRG 154
[12][TOP]
>UniRef100_A9TVY1 ATP-dependent Clp protease proteolytic subunit n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9TVY1_PHYPA
Length = 391
Score = 108 bits (270), Expect = 3e-22
Identities = 56/110 (50%), Positives = 74/110 (67%)
Frame = +3
Query: 228 RRTRTSHCLASAKDMSFDHIPKHLRGDNLKDGVMQNFKNVPQYPYGLTSAHMDMFMTEDS 407
RRT + A+ SF+HIPK R D LKDG+ QNF+ P YGL+ + MD FM E++
Sbjct: 49 RRTESRFLGVRAQAGSFNHIPKQFRQDGLKDGLTQNFETCPPSLYGLSPSQMDTFMVENN 108
Query: 408 PVRRQAEKVTEESISSRNNYLNNGGIWSMSGMNAAHARRYSMSVQMYRGG 557
P +RQAE+VTE SISS + Y + G+WS +G++ A + R SMSV MYRGG
Sbjct: 109 PYQRQAERVTEASISSASRYQDGTGMWSATGLDGAPS-RLSMSVSMYRGG 157
[13][TOP]
>UniRef100_A9SI89 ATP-dependent Clp protease proteolytic subunit n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9SI89_PHYPA
Length = 348
Score = 106 bits (264), Expect = 1e-21
Identities = 56/112 (50%), Positives = 73/112 (65%)
Frame = +3
Query: 222 VPRRTRTSHCLASAKDMSFDHIPKHLRGDNLKDGVMQNFKNVPQYPYGLTSAHMDMFMTE 401
V RRT A+ SFDHIPK R D LKDG+ +NF + P YGL + MDMFM E
Sbjct: 4 VCRRTDGRVFKVQAQAGSFDHIPKQFRKDGLKDGLTRNFDSCPPSLYGLNPSQMDMFMVE 63
Query: 402 DSPVRRQAEKVTEESISSRNNYLNNGGIWSMSGMNAAHARRYSMSVQMYRGG 557
++P +RQAE+V+E SISS + Y G+W+ +G++ A + R SMSV MYRGG
Sbjct: 64 NNPYQRQAERVSEASISSASRYQEGTGLWTATGLDGAPS-RLSMSVSMYRGG 114
[14][TOP]
>UniRef100_B9NHA6 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NHA6_POPTR
Length = 117
Score = 102 bits (255), Expect = 2e-20
Identities = 50/80 (62%), Positives = 62/80 (77%)
Frame = +3
Query: 327 MQNFKNVPQYPYGLTSAHMDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIWSMSGMN 506
M+N+KN+P YGLT + MDMFMTED+PV RQ+ VTEESISSR NYL++GG++S+SGM
Sbjct: 1 MENYKNLPLSLYGLTPSQMDMFMTEDNPVHRQSGSVTEESISSRKNYLDHGGMYSLSGMM 60
Query: 507 AAHARRYSMSVQMYRGGRGG 566
+YSMSV MYRGG G
Sbjct: 61 DRGPPKYSMSVTMYRGGGRG 80
[15][TOP]
>UniRef100_Q6L4S1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Oryza sativa
Japonica Group RepID=Q6L4S1_ORYSJ
Length = 386
Score = 101 bits (251), Expect = 4e-20
Identities = 66/150 (44%), Positives = 91/150 (60%), Gaps = 10/150 (6%)
Frame = +3
Query: 144 CSKLALPKSPFMSASKLSSSNMPCSTVPRRTRTS-HCL----ASAKDMSFDHIPKHLRGD 308
C A P SP S SSS P S +PRR S C ++DHIPK R +
Sbjct: 7 CPAAASP-SPAKSTFPPSSSPPP-SRLPRRPPASCRCYYYGDGGGFRKNYDHIPKQFREE 64
Query: 309 NLKDGVMQNFKNVPQYPYGLTSAHMDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIW 488
NLKDG+M N+KNVPQ+ YGL+ A ++MFM +D+P RQ+++VTEESIS+ +Y + G++
Sbjct: 65 NLKDGLMDNYKNVPQFLYGLSPAQIEMFMNDDNPYDRQSQRVTEESISASRSY-DEFGMY 123
Query: 489 SMSGMNAAHARRYSM-----SVQMYRGGRG 563
++SGM+ A YSM ++ M R GRG
Sbjct: 124 NLSGMHEGPA-GYSMGMGMGTMSMGRAGRG 152
[16][TOP]
>UniRef100_B8AXJ0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Oryza sativa
Indica Group RepID=B8AXJ0_ORYSI
Length = 386
Score = 101 bits (251), Expect = 4e-20
Identities = 66/150 (44%), Positives = 91/150 (60%), Gaps = 10/150 (6%)
Frame = +3
Query: 144 CSKLALPKSPFMSASKLSSSNMPCSTVPRRTRTS-HCL----ASAKDMSFDHIPKHLRGD 308
C A P SP S SSS P S +PRR S C ++DHIPK R +
Sbjct: 7 CPAAASP-SPAKSTFPPSSSPPP-SRLPRRPPASCRCYYYGDGGGFRKNYDHIPKQFREE 64
Query: 309 NLKDGVMQNFKNVPQYPYGLTSAHMDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIW 488
NLKDG+M N+KNVPQ+ YGL+ A ++MFM +D+P RQ+++VTEESIS+ +Y + G++
Sbjct: 65 NLKDGLMDNYKNVPQFLYGLSPAQIEMFMNDDNPYDRQSQRVTEESISASRSY-DEFGMY 123
Query: 489 SMSGMNAAHARRYSM-----SVQMYRGGRG 563
++SGM+ A YSM ++ M R GRG
Sbjct: 124 NLSGMHEGPA-GYSMGMGMGTMSMGRAGRG 152
[17][TOP]
>UniRef100_B4FYJ0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Zea mays
RepID=B4FYJ0_MAIZE
Length = 301
Score = 54.7 bits (130), Expect = 5e-06
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 7/68 (10%)
Frame = +3
Query: 381 MDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIWSMSGMNAAHARRY-------SMSV 539
M+MFM +D+P RQ++KVTEES+S+ +Y + G++++SGM+ A SMS+
Sbjct: 1 MEMFMNDDNPYNRQSQKVTEESVSAARSY-DEFGMYTLSGMHEGPASYSMGMGMGGSMSM 59
Query: 540 QMYRGGRG 563
M RGGRG
Sbjct: 60 SMGRGGRG 67