[UP]
[1][TOP]
>UniRef100_O22265 Signal recognition particle 43 kDa protein, chloroplastic n=1
Tax=Arabidopsis thaliana RepID=SR43C_ARATH
Length = 373
Score = 308 bits (789), Expect = 2e-82
Identities = 150/150 (100%), Positives = 150/150 (100%)
Frame = -3
Query: 577 DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGK 398
DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGK
Sbjct: 224 DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGK 283
Query: 397 DVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKW 218
DVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKW
Sbjct: 284 DVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKW 343
Query: 217 TDMSDATWEPQDNVDSTLVLLYQQQQPMNE 128
TDMSDATWEPQDNVDSTLVLLYQQQQPMNE
Sbjct: 344 TDMSDATWEPQDNVDSTLVLLYQQQQPMNE 373
[2][TOP]
>UniRef100_B9HR05 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HR05_POPTR
Length = 380
Score = 208 bits (529), Expect = 3e-52
Identities = 97/146 (66%), Positives = 120/146 (82%)
Frame = -3
Query: 577 DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGK 398
D+RGLT L+LA+EIL+ TPKGNPMQFGRR+GLE VI LE +FEYAEV EI+EKRGKGK
Sbjct: 220 DDRGLTPLDLAKEILRVTPKGNPMQFGRRLGLESVIRNLEEGIFEYAEVQEILEKRGKGK 279
Query: 397 DVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKW 218
D+EYLV+WKDG D EWVK + ED+ D+E GLEYAVA+ V+GKR+GDDGK EYLVKW
Sbjct: 280 DLEYLVKWKDGSDNEWVKAKFIGEDLVMDFEAGLEYAVAKGVVGKRLGDDGKN-EYLVKW 338
Query: 217 TDMSDATWEPQDNVDSTLVLLYQQQQ 140
TD+ +ATWEP++NVD L+ +++ Q
Sbjct: 339 TDIDEATWEPEENVDLDLIKEFEEGQ 364
[3][TOP]
>UniRef100_B9H1N6 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9H1N6_POPTR
Length = 265
Score = 204 bits (519), Expect = 4e-51
Identities = 93/146 (63%), Positives = 120/146 (82%)
Frame = -3
Query: 577 DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGK 398
D+RGLT +LA+EIL+ TPKGNPMQF RR+GLE +I +LE ++FEYAEV EI+EKRGKG+
Sbjct: 121 DDRGLTPFDLAKEILRVTPKGNPMQFERRLGLESIIRILEEEIFEYAEVQEILEKRGKGR 180
Query: 397 DVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKW 218
D+EYLV+WKDGG EWVK + ED+ +D+E GLEYAVAE V+GKR GD+GK EYLVKW
Sbjct: 181 DMEYLVKWKDGGANEWVKARFIGEDLVRDFEAGLEYAVAEGVMGKRPGDEGKN-EYLVKW 239
Query: 217 TDMSDATWEPQDNVDSTLVLLYQQQQ 140
TD+ +ATWEP++NVD L+ +++ Q
Sbjct: 240 TDIDEATWEPEENVDPDLIKEFEEGQ 265
[4][TOP]
>UniRef100_UPI0001982EFD PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001982EFD
Length = 373
Score = 199 bits (506), Expect = 1e-49
Identities = 90/144 (62%), Positives = 119/144 (82%)
Frame = -3
Query: 577 DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGK 398
D+RG T L+LARE+L+ TPKGNPMQF RR+GLE V+ VLE +FEYAEV EI+E+RGKG+
Sbjct: 217 DDRGRTPLDLAREMLRATPKGNPMQFARRLGLENVVRVLEEAIFEYAEVQEIMERRGKGQ 276
Query: 397 DVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKW 218
++EYLV+WKDG D EWVK +AE++ +D+E GLEYAVA+ V+GKR GDDG +EYLVKW
Sbjct: 277 NLEYLVKWKDGSDNEWVKAGLIAEELVRDFEAGLEYAVAQGVMGKRTGDDG-NMEYLVKW 335
Query: 217 TDMSDATWEPQDNVDSTLVLLYQQ 146
TD+ +ATWEP++NVD L+ +++
Sbjct: 336 TDIDEATWEPEENVDPDLIKAFEE 359
[5][TOP]
>UniRef100_A7P8N5 Chromosome chr3 scaffold_8, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7P8N5_VITVI
Length = 370
Score = 199 bits (506), Expect = 1e-49
Identities = 90/144 (62%), Positives = 119/144 (82%)
Frame = -3
Query: 577 DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGK 398
D+RG T L+LARE+L+ TPKGNPMQF RR+GLE V+ VLE +FEYAEV EI+E+RGKG+
Sbjct: 214 DDRGRTPLDLAREMLRATPKGNPMQFARRLGLENVVRVLEEAIFEYAEVQEIMERRGKGQ 273
Query: 397 DVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKW 218
++EYLV+WKDG D EWVK +AE++ +D+E GLEYAVA+ V+GKR GDDG +EYLVKW
Sbjct: 274 NLEYLVKWKDGSDNEWVKAGLIAEELVRDFEAGLEYAVAQGVMGKRTGDDG-NMEYLVKW 332
Query: 217 TDMSDATWEPQDNVDSTLVLLYQQ 146
TD+ +ATWEP++NVD L+ +++
Sbjct: 333 TDIDEATWEPEENVDPDLIKAFEE 356
[6][TOP]
>UniRef100_A5C8N4 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5C8N4_VITVI
Length = 373
Score = 199 bits (506), Expect = 1e-49
Identities = 90/144 (62%), Positives = 119/144 (82%)
Frame = -3
Query: 577 DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGK 398
D+RG T L+LARE+L+ TPKGNPMQF RR+GLE V+ VLE +FEYAEV EI+E+RGKG+
Sbjct: 217 DDRGRTPLDLAREMLRATPKGNPMQFARRLGLENVVRVLEEAIFEYAEVQEIMERRGKGQ 276
Query: 397 DVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKW 218
++EYLV+WKDG D EWVK +AE++ +D+E GLEYAVA+ V+GKR GDDG +EYLVKW
Sbjct: 277 NLEYLVKWKDGSDNEWVKAGLIAEELVRDFEAGLEYAVAQGVMGKRTGDDG-NMEYLVKW 335
Query: 217 TDMSDATWEPQDNVDSTLVLLYQQ 146
TD+ +ATWEP++NVD L+ +++
Sbjct: 336 TDIDEATWEPEENVDPDLIKAFEE 359
[7][TOP]
>UniRef100_B9RF69 Ankyrin repeat domain protein, putative n=1 Tax=Ricinus communis
RepID=B9RF69_RICCO
Length = 396
Score = 193 bits (491), Expect = 7e-48
Identities = 91/149 (61%), Positives = 115/149 (77%)
Frame = -3
Query: 577 DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGK 398
D++GLT L LA++IL TPKGNP QF RR+GLE VI V+ ++FEYAEV E++EKRGKG
Sbjct: 212 DDKGLTPLALAKQILNVTPKGNPAQFARRLGLENVIRVINEEIFEYAEVQELLEKRGKGD 271
Query: 397 DVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKW 218
VEYLV+WKDG D EWVK + ED+ +D+E GLEYAVAE V+GKRV +DGK EYLVKW
Sbjct: 272 KVEYLVKWKDGSDNEWVKAGVIGEDLIRDFEAGLEYAVAEGVMGKRVREDGKN-EYLVKW 330
Query: 217 TDMSDATWEPQDNVDSTLVLLYQQQQPMN 131
TD+ +ATWEP++NVD L+ ++ Q N
Sbjct: 331 TDIDEATWEPEENVDPDLIKEFEDGQVNN 359
[8][TOP]
>UniRef100_Q8LSQ2 Probable signal recognition particle 43 kDa protein, chloroplastic
n=2 Tax=Oryza sativa Japonica Group RepID=SR43C_ORYSJ
Length = 388
Score = 161 bits (408), Expect = 3e-38
Identities = 77/147 (52%), Positives = 106/147 (72%), Gaps = 1/147 (0%)
Frame = -3
Query: 577 DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGK 398
D +G T LEL +++L TPKGNP F RR+ LE LE V+E+ EV+++V+ RG+GK
Sbjct: 225 DGQGRTPLELVQDVLAKTPKGNPATFERRLALEAAAKELEKAVYEWGEVEKVVDGRGEGK 284
Query: 397 DVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGK-TIEYLVK 221
EYLV W+DGGD EWV+ VAED+ KD++ GLEYAVAE+V+ KR +G+ EYLVK
Sbjct: 285 WREYLVEWRDGGDREWVRAAWVAEDLVKDFDAGLEYAVAEAVVNKREAAEGEGKWEYLVK 344
Query: 220 WTDMSDATWEPQDNVDSTLVLLYQQQQ 140
W D+ +ATWEP +NVD+ L+ ++Q+Q
Sbjct: 345 WVDIEEATWEPAENVDAELLQEFEQRQ 371
[9][TOP]
>UniRef100_A2XC41 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2XC41_ORYSI
Length = 388
Score = 161 bits (407), Expect = 4e-38
Identities = 77/147 (52%), Positives = 106/147 (72%), Gaps = 1/147 (0%)
Frame = -3
Query: 577 DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGK 398
D +G T LEL +++L TPKGNP F RR+ LE LE V+E+ EV+++V+ RG+GK
Sbjct: 225 DGQGRTPLELVQDVLAKTPKGNPATFERRLALEAAAKELEKAVYEWGEVEKVVDGRGEGK 284
Query: 397 DVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGK-TIEYLVK 221
EYLV W+DGGD EWV+ VAED+ KD++ GLEYAVAE+V+ KR +G+ EYLVK
Sbjct: 285 WREYLVEWRDGGDREWVRAAWVAEDLVKDFDAGLEYAVAEAVVDKREAAEGEGKWEYLVK 344
Query: 220 WTDMSDATWEPQDNVDSTLVLLYQQQQ 140
W D+ +ATWEP +NVD+ L+ ++Q+Q
Sbjct: 345 WVDIEEATWEPAENVDAELLQEFEQRQ 371
[10][TOP]
>UniRef100_C0P9X8 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0P9X8_MAIZE
Length = 382
Score = 155 bits (392), Expect = 2e-36
Identities = 77/151 (50%), Positives = 103/151 (68%), Gaps = 5/151 (3%)
Frame = -3
Query: 577 DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGK 398
D +G T LEL +E+L PKGNP F R GLE LE V+E+AEV+++++ RG+GK
Sbjct: 225 DGQGRTPLELVQEVLARAPKGNPATFQLRQGLEAAQKELEKAVYEWAEVEKVIDGRGEGK 284
Query: 397 DVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKR-----VGDDGKTIE 233
EYLV W+DGG+ EWVK +AED+ D+E GLEYAVAE+V+ KR + + E
Sbjct: 285 WREYLVEWRDGGEREWVKAAWMAEDLVSDFEAGLEYAVAEAVLDKRQAATATAEGEDSWE 344
Query: 232 YLVKWTDMSDATWEPQDNVDSTLVLLYQQQQ 140
YLVKW D+ +ATWEP +NVD+ LV ++QQQ
Sbjct: 345 YLVKWVDIEEATWEPAENVDTELVQKFEQQQ 375
[11][TOP]
>UniRef100_C5WZV5 Putative uncharacterized protein Sb01g048210 n=1 Tax=Sorghum
bicolor RepID=C5WZV5_SORBI
Length = 435
Score = 154 bits (388), Expect = 6e-36
Identities = 77/151 (50%), Positives = 102/151 (67%), Gaps = 5/151 (3%)
Frame = -3
Query: 577 DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGK 398
D +G T LEL +E+L TPKGNP F R GLE LE V+E+AEV+++++ RG+GK
Sbjct: 278 DGQGRTPLELVQEVLARTPKGNPAAFQLRQGLEAAQKELEKAVYEWAEVEKVIDGRGEGK 337
Query: 397 DVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKR-----VGDDGKTIE 233
EYLV W+DGG+ EWVK VAED+ D+E GLEYAVAE+V+ KR + E
Sbjct: 338 WREYLVEWRDGGEREWVKAAWVAEDLVSDFEAGLEYAVAEAVVDKRQVATATAEGENRWE 397
Query: 232 YLVKWTDMSDATWEPQDNVDSTLVLLYQQQQ 140
YLVKW D+ +ATWEP +NVD+ LV ++ +Q
Sbjct: 398 YLVKWVDIEEATWEPAENVDAELVQEFELRQ 428
[12][TOP]
>UniRef100_A9SYD6 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9SYD6_PHYPA
Length = 285
Score = 142 bits (359), Expect = 1e-32
Identities = 66/146 (45%), Positives = 102/146 (69%)
Frame = -3
Query: 577 DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGK 398
DE+G ++L LA+E+L+ TP+ NPMQF RR+ L++V+ +L+ ++E EV++I++KR G
Sbjct: 142 DEKGRSSLMLAQELLERTPRTNPMQFARRLALDQVVKLLDEAIYETVEVEQILDKRIVGN 201
Query: 397 DVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKW 218
EYLV+W D + W ++AED+ KDYE+GLEY +AE ++ KR DGK EYLV+W
Sbjct: 202 VTEYLVKWSDDSEESWETTENIAEDLIKDYEEGLEYGIAEKIVDKR-EVDGKA-EYLVQW 259
Query: 217 TDMSDATWEPQDNVDSTLVLLYQQQQ 140
D ++ TWEP DNV ++ ++ Q+
Sbjct: 260 ADSTENTWEPADNVADEIIAEFESQK 285
[13][TOP]
>UniRef100_A8JIB9 Chloroplast SRP43/CAO subunit of signal recognition particle n=1
Tax=Chlamydomonas reinhardtii RepID=A8JIB9_CHLRE
Length = 382
Score = 72.8 bits (177), Expect = 2e-11
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Frame = -3
Query: 511 PMQFG---RRIGLEKVINVLEGQVFEYAEVDEIVEKRGK--GKDVEYLVRWKDGGDCEWV 347
P+ G R + LE+V N L ++++ E ++ R G E+LV + DG D EWV
Sbjct: 178 PLSMGSVQRILQLEEVKNCLTDRLYDEVEPGNVLNCRATPDGTGREFLVSFGDGRDDEWV 237
Query: 346 KGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDST 167
+V+ DV +DY GLEYAVAE V+ V + ++W+D +WEP+++V
Sbjct: 238 PERNVSADVLEDYLAGLEYAVAEEVLD--VVQVRTERRFKIRWSDGYPTSWEPEEHVPPE 295
Query: 166 LVLLYQQQQP 137
L+ L+ Q P
Sbjct: 296 LIQLFAAQHP 305
[14][TOP]
>UniRef100_Q01EK1 Cao undefined product (IC) n=1 Tax=Ostreococcus tauri
RepID=Q01EK1_OSTTA
Length = 333
Score = 64.7 bits (156), Expect = 5e-09
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Frame = -3
Query: 577 DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGK 398
D G + L R +L P + RR+ LE +++ +E ++E D I+ R
Sbjct: 203 DRTGRSVQGLLRTLLANMPV-TTATYSRRVSLESILSTIESHIYEEVFPDRILSMRESNS 261
Query: 397 DVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVI----GKRVGDDGKTIE 233
EYLVRW DG + WV + +++DV +E +E V + V+ G+ G GK I+
Sbjct: 262 GREYLVRWIDGYEDMWVTEMDISDDVISAFERNVENVVGKEVLTVGDGRTAGKQGKLIQ 320
[15][TOP]
>UniRef100_C1FEM2 Signal recognition particle SRP43 protein, chloroplast n=1
Tax=Micromonas sp. RCC299 RepID=C1FEM2_9CHLO
Length = 339
Score = 60.8 bits (146), Expect = 7e-08
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 10/139 (7%)
Frame = -3
Query: 577 DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKR--GK 404
D G + L+L ++ TP + F RR LE + + LE +E I R G
Sbjct: 203 DNTGRSPLDLVETLMHNTP-ATTVTFARRSALESISDTLEQYSYEEVPPASIKAARPAGD 261
Query: 403 GKDVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVI--------GKRVGDD 248
G D EYL+ W D WV ++A+++ KD++ G+EYA + V G ++
Sbjct: 262 GGD-EYLIEWLDERMDSWVPENNIADNLIKDFKAGIEYAPQDKVYTPPTYAPSGIKIKTK 320
Query: 247 GKTIEYLVKWTDMSDATWE 191
T LVKW D + +WE
Sbjct: 321 SAT---LVKWADGAPPSWE 336
[16][TOP]
>UniRef100_C1MLN9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MLN9_9CHLO
Length = 256
Score = 58.9 bits (141), Expect = 3e-07
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Frame = -3
Query: 577 DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKR-GKG 401
D G + L+L +L +TP + + RR +E + LE VFE I R +
Sbjct: 121 DISGRSPLDLIEGLLLSTP-ATTVTYARRSIMESITRTLEDFVFEEVPPAAIKACRLTEN 179
Query: 400 KDVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYA----------VAESVIGKRVGD 251
+ EYL+ W D WV ++++V +D+E GLEYA A+ + KR
Sbjct: 180 EQKEYLIEWLDEMPPSWVSEKDISDEVIEDFEMGLEYAEILKKYDPPCPADESVSKR--- 236
Query: 250 DGKTIEYLVKWTDMSDATWEP 188
LVKW D + +WEP
Sbjct: 237 -----RQLVKWADGAALSWEP 252