ROUGE

Gene/Protein Characteristic Table for mKIAA1738

Link to : HUGE \| SWISS-PROT/TrEMBL
Features : DNA sequence \| Protein sequence

Accession No. :	AK129434
Description :	testis expressed gene 2.
Clone Name :	mpm05100 [Vector Info]
Source :	Mouse embryonic tail

Features of the cloned DNA sequence	Description

Length: 4933 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 1448 bp

Genome contig ID gi65527427r_106223237
PolyA signal sequence
(AATAAA,-16)
+----*----+----*----+----*----+----
CACTTGCATTGTCTCACAAAATAAATATTCATGTC
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AAACACCAGACAAGCATGTTATTTTTTAGAGAAACCCACAGGACCGTGAA

Genomic structure deduced by Blast search against draft genome sequences
Comparison with the corresponding KIAA cDNA.

KIAA Alignment based on:

KIAA1738 DNA sequence, AA sequence

KIAA	Alignment based on:
KIAA1738	DNA sequence, AA sequence

Features of the protein sequence	Description

Coding region: 81..3485
Length: 1134 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
Q6ZPJ0	100.0	Testis-expresse...	Mus musculus
EDL34301	99.9	testis expresse...	Mus musculus
EDM06403	94.0	testis expresse...	Rattus norvegicus
XP_001081602	93.4	similar to test...	Rattus norvegicus
XP_221043	93.8	similar to test...	Rattus norvegicus

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other ROUGE database (FASTA output)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

ProfileScan NULL 140 201 PS50324 NULL

ScanRegExp IPR002114 274 289 PS00589 HPr serine phosphorylation site

Search method	interpro_ID	From	To	Entry	Definition
ProfileScan	NULL	140	201	PS50324	NULL
ScanRegExp	IPR002114	274	289	PS00589	HPr serine phosphorylation site

Prediction of transmembrane (TM) segments

Method From To amino acid sequence

SOSUI 476 498 PVKTLGFFIMCVYAYLILPLPYY

502 523 LFLGVGLGFMTAVCMIWFFTPP

Method	From	To	amino acid sequence
SOSUI	476	498	PVKTLGFFIMCVYAYLILPLPYY
502	523	LFLGVGLGFMTAVCMIWFFTPP

How to obtain mKIAA clone(s) How to obtain anti mKIAA antibodies Back to the ROUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	NO

Length of 3'UTR	1448 bp
Genome contig ID	gi65527427r_106223237
PolyA signal sequence (AATAAA,-16)	+--------+--------+----*----+---- CACTTGCATTGTCTCACAAAATAAATATTCATGTC
Flanking genome sequence (100000 - 99951)	----+--------+--------+--------+--------+----* AAACACCAGACAAGCATGTTATTTTTTAGAGAAACCCACAGGACCGTGAA

Gene/Protein Characteristic Table for mKIAA1738

Features of the cloned DNA sequence

Features of the protein sequence