Human ORFeome

Gene/Protein Characteristic Table for ORH23176P

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Product ID	ORH23176P
Clone name	on22450
IMAGE Clone ID	100071858
Vector name	pDONR223
Stop codon	without
Genbank Acc	HQ448430
Parent Genbank Acc	BC069690.1
Parent gene symbol	DEFA5
Description	Homo sapiens defensin, alpha 5, Paneth cell-specific, mRNA (cDNA clone MGC:97237 IMAGE:7262486), complete cds.

Length: 282 bp

Restriction map

Length: 94 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against ORFeome database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition HMMPfam IPR002366 1 52 PF00879 Defensin propeptide IPR006081 65 93 PF00323 Alpha defensin HMMSmart IPR006080 65 93 SM00048 Mammalian defensin ScanRegExp IPR006081 65 93 PS00269 Alpha defensin

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MRTIAILAAILLVALQAQAESLQ 23 PRIMARY 23

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