Miyakogusa Predicted Gene

chr6.CM0055.330.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0055
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A2Q1P1_MEDTR 486 74.0 80.0 (tr|A2Q1P1) Dynamin central region; Dynamin GTPase effector OS=Medicago truncatula GN=MtrDRAFT_AC148971g28v2 PE=4 SV=1
TAIR_pep AT4G33650.1 291 55.4 72.7 | Symbols: ADL2 | ADL2 (ARABIDOPSIS DYNAMIN-LIKE 2); GTP binding / GTPase | chr4:16161076-16166590 FORWARD
Medicago IMGA|AC148971_40.4 488 74.0 80.0 Dynamin central region; Dynamin; Dynamin GTPase effector chr02_pseudomolecule_IMGAG_V2 2071528-2083206 E EGN_Mt071002 20080227
Soybean Glyma13g32940.1 488 75.4 82.0  
Lotus Consensus KMC000049A_C03 1320 100.0 100.0 KMC000049A_c03
3' Unigene KMC000049A_C03 1489 99.1 99.1 KMC000049A_c03
A list of protein families, domains and functional sites (searches in InterPro)
chr6.CM0055.330.nc length: 340 aa.
IPR000375 Dynamin central region
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
HMMPfam PF01031 Dynamin_M 0.00012 17-44
IPR003130 Dynamin GTPase effector
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
HMMPfam PF02212 GED 3.1e-35 165-256
HMMSmart SM00302 no description 4.5e-33 165-256
no_ID  
Coil coil coiled-coil NA 236-257
HMMPanther PTHR11566 DYNAMIN 1.7e-40 7-61
103-256
HMMPanther PTHR11566:SF12 DYNAMIN 1.7e-40 7-61
103-256
Seg seg seg NA 101-120
280-299
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr6.CM0055.330.nc 340 0.300 0.030 0.032 0.381 _ 5
Wolf-PSORT
chr6.CM0055.330.nc	chlo 5, nucl 2, cyto 2, vacu 2, cyto_nucl 2, mito 1.5, cyto_pero 1.5, mito_plas 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr6.CM0055.330.nc Not targeted -43.094 -2.398 -3.664 60.40% -37.033