Miyakogusa Predicted Gene
- chr6.CM0037.310.nc
- Related links:
- Predicted Sequence Links:
- Genome Sequence: CM0037
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TAIR_pep |
AT5G57870.1 |
41.6 |
100.0 |
100.0 |
| Symbols: | eukaryotic translation initiation factor 4F, putative / eIF-4F, putative | chr5:23456981-23460659 FORWARD |
|---|
| Medicago |
IMGA|AC140546_1.5 |
41.6 |
100.0 |
100.0 |
Initiation factor eIF-4 gamma, middle; Initiation factor eIF-4 gamma, MA3 chr08_pseudomolecule_IMGAG_V2 33611427-33617657 F EGN_Mt071002 20080227 |
|---|
| Lotus Consensus |
KMC005574A_C01 |
60.0 |
88.9 |
88.9 |
KMC005574A_c01 |
|---|
| 3' Unigene |
BP083799 |
389 |
100.0 |
100.0 |
MRL002d12_f |
|---|
| 5' Unigene |
AV409733 |
373 |
100.0 |
100.0 |
MWL061d03_r |
|---|
- A list of protein families, domains and functional sites (searches in InterPro)
| chr6.CM0037.310.nc |
length: 74 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
51-61 |
- TargetP V1.0 Prediction Results
| Name |
Length |
cTP |
mTP |
SP |
other |
Loc. |
RC |
| chr6.CM0037.310.nc |
74 |
0.211 |
0.475 |
0.008 |
0.330 |
M |
5
|
- Wolf-PSORT
chr6.CM0037.310.nc nucl 11, mito 1, plas 1, cysk 1, cysk_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| chr6.CM0037.310.nc |
Not targeted |
-10.208 |
-0.167 |
-7.116 |
3.84% |
-2.925
|