Miyakogusa Predicted Gene

chr2.CM0031.300.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0031
Proteome Analysis:
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL A7PG79_VITVI 1499 80.3 89.5 (tr|A7PG79) Chromosome chr6 scaffold_15, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017422001 PE=4 SV=1
TAIR_pep AT2G27040.1 1371 73.6 86.6 | Symbols: OCP11, AGO4 | AGO4 (ARGONAUTE 4); nucleic acid binding | chr2:11543873-11548581 REVERSE
Medicago IMGA|AC131455_15.4 1583 83.8 92.0 Argonaute and Dicer protein, PAZ; Stem cell self-renewal protein Piwi chr05_pseudomolecule_IMGAG_V2 31662746-31670122 E EGN_Mt071002 20080227
Soybean Glyma14g04510.1 1590 85.7 93.8  
Lotus Consensus KMC001433A_C01 1176 99.8 99.8 KMC001433A_c01
3' Unigene KMC000339A_C04 892 99.4 99.4 KMC000339A_c04
5' Unigene AV406932 482 99.2 99.2 MWL012d04_r
A list of protein families, domains and functional sites (searches in InterPro)
chr2.CM0031.300.nc length: 927 aa.
IPR003100 Argonaute and Dicer protein, PAZ
method AccNumber shortName E-value location
HMMPfam PF02170 PAZ 5.1e-40 291-432
ProfileScan PS50821 PAZ 11.797 315-409
IPR003165 Stem cell self-renewal protein Piwi
HMMPfam PF02171 Piwi 9.2e-145 579-887
ProfileScan PS50822 PIWI 43.433 579-887
no_ID  
Gene3D 2.170.260.10 no description 7.7e-36 280-418
HMMPanther PTHR22891 EUKARYOTIC 2.6e-251 191-927
Seg seg seg NA 4-17
21-27
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr2.CM0031.300.nc 927 0.327 0.040 0.071 0.890 _ 3
Wolf-PSORT
chr2.CM0031.300.nc	nucl 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr2.CM0031.300.nc Not targeted -61.417 0 -17.858 90.09% -43.559