Miyakogusa Predicted Gene

chr1.CM0410.180.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0410
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A5C6W0_VITVI 132 56.0 69.0 (tr|A5C6W0) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038107 PE=4 SV=1
TAIR_pep AT3G29575.4 129 71.1 84.3 | Symbols: | similar to TMAC2 (TWO OR MORE ABRES-CONTAINING GENE 2) [Arabidopsis thaliana] (TAIR:AT3G02140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49169.1); contains InterPro domain Protein of unknown function DUF1675 (InterPro:IPR012463) | chr3:11384895-11386136 REVERSE
Medicago IMGA|CT573052_24.5 125 48.1 63.9 Protein of unknown function DUF1675 chr05_pseudomolecule_IMGAG_V2 18310606-18315334 E EGN_Mt071002 20080227
Soybean Glyma08g27010.1 292 46.8 55.0  
Lotus Consensus KMC011471A_C01 48.1 90.0 90.0 KMC011471A_c01
3' Unigene KMC002661A_C02 69.9 95.3 95.3 KMC002661A_c02
A list of protein families, domains and functional sites (searches in InterPro)
chr1.CM0410.180.nc length: 404 aa.
IPR012463 Protein of unknown function DUF1675
method AccNumber shortName E-value location
HMMPfam PF07897 DUF1675 2.1e-71 71-398
no_ID  
Coil coil coiled-coil NA 159-187
Seg seg seg NA 61-79
113-141
151-162
242-270
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr1.CM0410.180.nc 404 0.253 0.101 0.037 0.852 _ 3
Wolf-PSORT
chr1.CM0410.180.nc	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr1.CM0410.180.nc Not targeted -25.391 -8.431 -6.064 21.43% -10.895