Miyakogusa Predicted Gene

chr1.CM0284.500.nc
Related links:
Predicted Sequence Links:
Genome Sequence: CM0284
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A7PZ88_VITVI 352 45.2 57.9 (tr|A7PZ88) Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026787001 PE=4 SV=1
TAIR_pep AT1G01790.1 274 47.5 61.8 | Symbols: ATKEA1, KEA1 | KEA1 (K EFFLUX ANTIPORTER 1); potassium:hydrogen antiporter | chr1:284781-290869 FORWARD
Medicago IMGA|AC123899_51.4 595 63.3 72.6 Contains similarity to thiol protease from Phaedon cochleariae gb|Y17903. , related chr07_pseudomolecule_IMGAG_V2 16563266-16567637 H EGN_Mt071002 20080227
Soybean Glyma09g39770.1 553 63.7 69.8  
A list of protein families, domains and functional sites (searches in InterPro)
chr1.CM0284.500.nc length: 609 aa.
IPR009054 DNA topoisomerases I, dispensable insert, eukaryotic-type
method AccNumber shortName E-value location
superfamily SSF46596 Eukaryotic 0.015 271-330
no_ID  
Coil coil coiled-coil NA 154-175
274-330
351-372
Seg seg seg NA 124-146
472-483
504-516
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr1.CM0284.500.nc 609 0.288 0.369 0.001 0.386 _ 5
Wolf-PSORT
chr1.CM0284.500.nc	chlo 11, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr1.CM0284.500.nc Not targeted -47.661 -0.787 -5.581 70.01% -41.293