Miyakogusa Predicted Gene

chr1.CM0284.500.nc

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr1.CM0284.500.nc - phase: 0 
         (609 letters)

Database: TAIR8_pep 
           32,825 sequences; 13,166,001 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G01790.1 | Symbols: ATKEA1, KEA1 | KEA1 (K EFFLUX ANTIPORTER ...   274   1e-73

>AT1G01790.1 | Symbols: ATKEA1, KEA1 | KEA1 (K EFFLUX ANTIPORTER 1);
           potassium:hydrogen antiporter | chr1:284781-290869
           FORWARD
          Length = 1193

 Score =  274 bits (700), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 179/377 (47%), Positives = 233/377 (61%), Gaps = 41/377 (10%)

Query: 153 SVDELKELLQRALKELEVAQINSTMFEEKVKKISETAIFLHDEAARSWSEVNSTLDTIQE 212
           S++ELKELL +A+KELEVA++NSTMFEEK ++ISE AI L DEAA +W +VN TLD I++
Sbjct: 140 SLEELKELLHKAIKELEVARLNSTMFEEKAQRISERAIALKDEAATAWLDVNKTLDVIRD 199

Query: 213 IANEEHTAKEAVQNATMALSVAEARLQVALDSLEVA--KEVPDSEKGSDEGTGDKDMAEK 270
              EE  AKEAVQ ATMALS+AEARLQV ++SLE     ++P   + ++E     D+ +K
Sbjct: 200 TVYEEALAKEAVQTATMALSLAEARLQVIVESLEAGAGNDIPHVSEETEETI---DVNDK 256

Query: 271 GKSLFNAQEDIKQCQTHLANCEAELRRLQSRKEELQTEVSKLQEIAEKAQLNAVKAEEDV 330
            ++L  A++DIK+CQ +L NCE++L  L S+K+ELQ EV KL E AE  Q++++KAEEDV
Sbjct: 257 EEALLAAKDDIKECQVNLDNCESQLSALLSKKDELQKEVDKLNEFAETIQISSLKAEEDV 316

Query: 331 TNIMLLAEQAVAFELEATQRVNDAEIALQRADKSVSNLNADTTESIQVQDVESVSEDEKV 390
           TNIM LAEQAVAFELEATQRVNDAEIALQRA+KS+S          Q+ D E+  ED  V
Sbjct: 317 TNIMKLAEQAVAFELEATQRVNDAEIALQRAEKSLSISQTPEETQGQLSDEETSQEDAMV 376

Query: 391 DQGFSSDAT--VE----RNGDLATDDESLLPKLSPETLSEKTSHLEDITQSDNLSDNENG 444
             G   D T  VE    ++GDL      +  +L P+ + ++   L   TQ    SD+ENG
Sbjct: 377 LSGNVEDVTHQVEKESPKDGDLPV--VQITAELVPDIVGQRNKKL---TQPYESSDHENG 431

Query: 445 --------------------VQTKKQETQKDLTRDSSPF-APKALLKKXXXXXXXXXXXX 483
                               VQTKKQETQKDL ++ S   +PKA   K            
Sbjct: 432 KPSVESSKVVEADSEKPKINVQTKKQETQKDLPKEGSSLNSPKASFNKSSRFFSASFFSS 491

Query: 484 TEDGAEFTPTSVFEALV 500
             DG      +VF +LV
Sbjct: 492 NPDGT----ATVFGSLV 504