Miyakogusa Predicted Gene

chr1.CM0098.370.nd
Related links:
Predicted Sequence Links:
Genome Sequence: CM0098
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q2HUG8_MEDTR 516 82.3 92.9 (tr|Q2HUG8) Chloroplast protein import component Toc34 OS=Medicago truncatula GN=MtrDRAFT_AC149134g22v2 PE=4 SV=1
TAIR_pep AT5G05000.1 436 65.0 82.2 | Symbols: ATTOC34, OEP34, TOC34 | ATTOC34/OEP34 (Translocase of chloroplast 34) | chr5:1474263-1475773 REVERSE
Medicago IMGA|AC161401_8.4 516 82.3 92.9 Chloroplast protein import component Toc34 chr07_pseudomolecule_IMGAG_V2 23524447-23528115 E EGN_Mt071002 20080227
Soybean Glyma19g30210.3 559 86.5 94.2  
Lotus Consensus KMC003127A_C01 525 98.9 98.9 KMC003127A_c01
3' Unigene KMC003127A_C01 846 97.7 97.7 KMC003127A_c01
5' Unigene AV427822 737 99.7 99.7 MWM087f12_r
A list of protein families, domains and functional sites (searches in InterPro)
chr1.CM0098.370.nd length: 316 aa.
IPR005688 Chloroplast protein import component Toc34
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
Cellular Component GO:0009707 chloroplast outer membrane    
Molecular Function GO:0015450 protein translocase activity    
HMMTigr TIGR00991 3a0901s02IAP34: 5.5e-212 1-314
IPR006703 AIG1
Molecular Function GO:0005525 GTP binding    
HMMPfam PF04548 AIG1 6.7e-61 38-235
no_ID  
Gene3D 3.40.50.300 no description 5.1e-92 6-269
HMMPanther PTHR10903 AIG1 7.2e-12 17-188
superfamily SSF52540 P-loop 1.8e-18 1-257
TargetP V1.0 Prediction Results
Name Length cTP mTP SP other Loc. RC
chr1.CM0098.370.nd 316 0.309 0.105 0.043 0.357 _ 5
Wolf-PSORT
chr1.CM0098.370.nd	chlo 8, mito 2, nucl 1.5, cysk_nucl 1.5, mito_plas 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
chr1.CM0098.370.nd Not targeted -33.480 -0.093 -3.088 38.19% -30.298