Miyakogusa Predicted Gene

chr1.CM0295.1160.nc
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr1.CM0295.1160.nc
         (4078 letters)

Database: lotus_EST_unigene 
           20,423 sequences; 9,996,863 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KMC003765A_C01 KMC003765A_c01                                         712   0.0  
KMC005805A_C01 KMC005805A_c01                                          48   1e-04

>KMC003765A_C01 KMC003765A_c01;
          Length = 407

 Score =  712 bits (359), Expect = 0.0
 Identities = 400/407 (98%), Gaps = 5/407 (1%)
 Strand = Plus / Minus

                                                                        
Query: 3447 gaagatccaagggaagctattctaaaatatgctgatgttgctaaaaaggatccaaagtac 3506
            ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 407  gaagatccaagggaagctattttaaaataagctgatgttgctaaaaaggatccaaagtac 348

                                                                        
Query: 3507 attgctccagcatatgcagaaacccaacctgagcctgtgtatgcgaagtcagattctgag 3566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347  attgctccagcatatgcagaaacccaacctgagcctgtgtatgcgaagtcagattctgag 288

                                                                        
Query: 3567 gatgaagagaaatgattatgtaatgaagtaacgatcgc-tggtag-cccggtatcgccgg 3624
            |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 287  gatgaagagaaatgattatgtaatgaagtaacgatcgcctggtaggcccggtatcgccgg 228

                                                                        
Query: 3625 tgcgtaatgcagagggggcggcaggcaa-gagtgactcaaacac-gaggggagcattccc 3682
            |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 227  tgcgtaatgcagagggggcggcaggcaacgagtgactcaaacaccgaggggagcattccc 168

                                                                        
Query: 3683 aacatgggactgcatatacccttcccagcaatgtttagtttaggcagcttggtagctcta 3742
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167  aacatgggactgcatatacccttcccagcaatgtttagtttaggcagcttggtagctcta 108

                                                                        
Query: 3743 caaagttttagcaatcttctttgcgcggagtattggtatgatctgtacattatgtagtgt 3802
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107  caaagttttagcaatcttctttgcgcggagtattggtatgatctgtacattatgtagtgt 48

                                                           
Query: 3803 gtaaaattgaatttttaaaacaatt-caaatgctatttttaacaaac 3848
            ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 47   gtaaaattgaatttttaaaacaattccaaatgctatttttaacaaac 1


>KMC005805A_C01 KMC005805A_c01;
          Length = 649

 Score = 48.1 bits (24), Expect = 1e-04
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 1797 aaaagtgagtggaaatgagattgaagag 1824
            ||||||||||||||||||||| ||||||
Sbjct: 354  aaaagtgagtggaaatgagatggaagag 381