Miyakogusa Predicted Gene

chr1.CM0206.120.nd
Show Alignment:  

BLASTN 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= chr1.CM0206.120.nd
         (4101 letters)

Database: lotus_EST_unigene 
           20,423 sequences; 9,996,863 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AV775490  MPD084a08_f                                                 101   1e-20
KMC005394A_C01 KMC005394A_c01                                          84   2e-15
BP072824  GNf074c01                                                    60   3e-08
BP044655  SPD008f09_f                                                  48   1e-04

>AV775490  MPD084a08_f;
          Length = 82

 Score =  101 bits (51), Expect = 1e-20
 Identities = 57/59 (96%)
 Strand = Plus / Minus

                                                                       
Query: 3822 tgtattctttactaatattatatggtggtggaggacaactccctagctcatagaaatcc 3880
            ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 82   tgtattctttacttatattatatggtggtggaggaccactccctagctcatagaaatcc 24


>KMC005394A_C01 KMC005394A_c01;
          Length = 522

 Score = 83.8 bits (42), Expect = 2e-15
 Identities = 88/102 (86%), Gaps = 6/102 (5%)
 Strand = Plus / Plus

                                                                        
Query: 2109 gaaatggaattgagtaacaaatccaagcaaat-aatttaactttctttttctttgtttac 2167
            |||||||||| || ||||||| |||||||||| ||||||||||||||||||| |||||||
Sbjct: 43   gaaatggaatagaataacaaacccaagcaaatgaatttaactttctttttctctgtttac 102

                                                      
Query: 2168 -----aaagtaacttttatcaactgacactattttatagaaa 2204
                  ||||||||||||||||||  ||||||||||| ||||
Sbjct: 103  ggagtgaagtaacttttatcaactagcactattttatggaaa 144



 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                       
Query: 2206 aattcattcaattacttccaaaccaaa 2232
            |||||||||||||||||||||||||||
Sbjct: 174  aattcattcaattacttccaaaccaaa 200


>BP072824  GNf074c01;
          Length = 187

 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 50  gtaatgatatatacacacctccttatttatacacttca 87
           ||||||||||||||||||||| || |||||||||||||
Sbjct: 73  gtaatgatatatacacacctctttttttatacacttca 110


>BP044655  SPD008f09_f;
          Length = 550

 Score = 48.1 bits (24), Expect = 1e-04
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                      
Query: 43 tttaagagtaatgatatatacacacctc 70
          |||| |||||||||||||||||||||||
Sbjct: 34 tttatgagtaatgatatatacacacctc 7