Miyakogusa Predicted Gene

Lj6g3v2274590.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7IPF9_MEDTR 1003 85.2 92.0 (tr|G7IPF9) Potassium channel OS=Medicago truncatula GN=MTR_2g006870 PE=4 SV=1
TAIR_pep AT4G22200.1 744 66.3 77.3 | Symbols: AKT2/3, AKT3, AKT2, KT2/3 | potassium transport 2/3 | chr4:11746666-11750091 REVERSE LENGTH=802
Medicago Medtr2g006870.1 1003 85.2 92.0 | potassium outward rectifying channel protein | HC | chr2:661516-654544 | 20130731
Soybean Glyma08g20030.1 963 81.9 90.0  
LJGI gnl|LJGI|BP075741 182 95.5 95.5 similar to UniRef100_O24538 Cluster: Potassium channel; n=1; Vicia faba|Rep: Potassium channel - Vicia faba (Broad bean), partial (4%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2274590.2 length: 571 aa.
IPR000595 Cyclic nucleotide-binding domain
method AccNumber shortName E-value location
HMMPfam PF00027 cNMP_binding 1.8e-12 159-241
HMMSmart SM00100 Cyclic 2.6e-24 138-255
ProfileScan PS50042 CNMP_BINDING_3 21.059 138-257
IPR002110 Ankyrin repeat
Molecular Function GO:0005515 protein binding    
FPrintScan PR01415 ANKYRIN 1e-07 314-329
426-440
HMMPfam PF00023 Ank 5.4e-05 410-438
HMMSmart SM00248 ankyrin 0.00064 280-309
313-342
346-377
380-406
410-439
ProfileScan PS50088 ANK_REPEAT 11.407 313-345
410-442
IPR003938 Potassium channel, voltage-dependent, EAG/ELK/ERG
Molecular Function GO:0005249 voltage-gated potassium channel activity    
Biological Process GO:0006813 potassium ion transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR01463 EAGCHANLFMLY 7.9e-06 8-25
34-45
52-61
IPR013099 Ion transport 2
HMMPfam PF07885 Ion_trans_2 9e-12 7-60
IPR014710 RmlC-like jelly roll fold
Gene3D G3DSA:2.60.120.10 no description 1.4e-20 122-251
IPR018490 Cyclic nucleotide-binding-like
superfamily SSF51206 cAMP-binding 2.1e-41 64-260
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 4.9e-35 252-462
HMMPfam PF12796 Ank_2 1.8e-14 287-368
ProfileScan PS50297 ANK_REP_REGION 30.953 280-442
superfamily SSF48403 Ankyrin 8e-34 278-464
IPR021789 Potassium channel, plant-type
HMMPfam PF11834 DUF3354 6.3e-25 497-570
ProfileScan PS51490 KHA 26.609 498-571
no_ID  
Gene3D G3DSA:1.10.287.70 no description 5e-18 6-71
HMMPanther PTHR10217 VOLTAGE 2.4e-75 5-257
HMMPanther PTHR10217:SF7 CYCLIC 2.4e-75 5-257
Seg seg seg NA 221-233
superfamily SSF81324 Voltage-gated 5.5e-17 8-65
Wolf-PSORT
Lj6g3v2274590.2	chlo 4, extr 4, vacu 3, nucl 1, mito 1, plas 1, nucl_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2274590.2