Miyakogusa Predicted Gene

Lj6g3v2274590.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2274590.2 tr|G7IPF9|G7IPF9_MEDTR Potassium channel
OS=Medicago truncatula GN=MTR_2g006870 PE=4 SV=1,87.28,0,CYCLIC
NUCLEOTIDE GATED CHANNEL,NULL; VOLTAGE AND LIGAND GATED POTASSIUM
CHANNEL,NULL; Ank_2,Ankyrin,CUFF.60989.2
         (1719 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP075741 similar to UniRef100_O24538 Cluster: Potassium...   182   5e-45
gnl|LJGI|TC75371                                                      125   1e-27

>gnl|LJGI|BP075741 similar to UniRef100_O24538 Cluster: Potassium channel; n=1; Vicia
            faba|Rep: Potassium channel - Vicia faba (Broad bean),
            partial (4%)
          Length = 239

 Score =  182 bits (92), Expect = 5e-45
 Identities = 107/112 (95%)
 Strand = Plus / Minus

                                                                        
Query: 1608 aaaatttggatttgatgcaagggatgcaatggtgacaaatgatgaaggagcagaaataga 1667
            |||||||||||||||||| ||||| ||||||| ||| ||||||||||||||||| |||||
Sbjct: 151  aaaatttggatttgatgccagggacgcaatggcgactaatgatgaaggagcagacataga 92

                                                                
Query: 1668 ctgtattgatgtgatcagagataatgataaagtttatatttttgaataggtt 1719
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91   ctgtattgatgtgatcagagataatgataaagtttatatttttgaataggtt 40


>gnl|LJGI|TC75371 
          Length = 518

 Score =  125 bits (63), Expect = 1e-27
 Identities = 63/63 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1657 gcagaaatagactgtattgatgtgatcagagataatgataaagtttatatttttgaatag 1716
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350  gcagaaatagactgtattgatgtgatcagagataatgataaagtttatatttttgaatag 409

               
Query: 1717 gtt 1719
            |||
Sbjct: 410  gtt 412